View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9352_low_6 (Length: 347)

Name: NF9352_low_6
Description: NF9352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9352_low_6
NF9352_low_6
[»] chr5 (28 HSPs)
chr5 (1-120)||(325156-325274)
chr5 (1-110)||(22047759-22047867)
chr5 (1-98)||(39605461-39605558)
chr5 (1-95)||(22049131-22049225)
chr5 (1-95)||(39603880-39603974)
chr5 (1-99)||(27705307-27705405)
chr5 (1-81)||(30859181-30859261)
chr5 (1-120)||(30912133-30912251)
chr5 (1-117)||(30857827-30857942)
chr5 (1-99)||(30910768-30910866)
chr5 (1-81)||(15941300-15941380)
chr5 (10-86)||(24503220-24503296)
chr5 (10-86)||(24509040-24509116)
chr5 (1-99)||(8521282-8521380)
chr5 (1-85)||(22308804-22308888)
chr5 (1-99)||(1010355-1010453)
chr5 (1-86)||(34894176-34894261)
chr5 (75-120)||(324140-324185)
chr5 (1-86)||(22307535-22307620)
chr5 (15-83)||(28393272-28393340)
chr5 (1-85)||(33173965-33174049)
chr5 (10-78)||(34898963-34899031)
chr5 (1-39)||(8523797-8523835)
chr5 (1-39)||(9169613-9169651)
chr5 (1-39)||(11262283-11262321)
chr5 (1-38)||(20538080-20538117)
chr5 (1-57)||(32757852-32757908)
chr5 (1-33)||(41798004-41798036)
[»] chr4 (53 HSPs)
chr4 (1-124)||(1188870-1188993)
chr4 (1-116)||(1829780-1829895)
chr4 (1-116)||(1587209-1587324)
chr4 (1-124)||(44503645-44503767)
chr4 (1-95)||(42871122-42871216)
chr4 (1-98)||(4129020-4129117)
chr4 (1-122)||(37882861-37882983)
chr4 (1-99)||(393628-393727)
chr4 (1-95)||(390244-390338)
chr4 (1-83)||(24426366-24426448)
chr4 (1-117)||(2310950-2311065)
chr4 (1-88)||(6349555-6349642)
chr4 (1-83)||(6348182-6348264)
chr4 (1-86)||(1831267-1831352)
chr4 (1-120)||(52963596-52963714)
chr4 (1-116)||(40792778-40792890)
chr4 (1-85)||(42810208-42810292)
chr4 (1-121)||(52241125-52241244)
chr4 (1-84)||(2312488-2312571)
chr4 (1-124)||(37884244-37884366)
chr4 (1-85)||(31965862-31965946)
chr4 (1-85)||(31968397-31968481)
chr4 (1-68)||(27850954-27851021)
chr4 (10-81)||(42872308-42872379)
chr4 (1-85)||(1794438-1794522)
chr4 (1-84)||(44501545-44501628)
chr4 (1-99)||(11968538-11968636)
chr4 (1-95)||(27847705-27847799)
chr4 (1-83)||(49342646-49342728)
chr4 (1-86)||(1190196-1190281)
chr4 (1-85)||(10168788-10168872)
chr4 (1-84)||(11438574-11438657)
chr4 (1-83)||(1588096-1588178)
chr4 (1-99)||(7707615-7707713)
chr4 (1-95)||(23201873-23201967)
chr4 (1-124)||(53432089-53432212)
chr4 (1-116)||(54485519-54485634)
chr4 (9-120)||(7708759-7708869)
chr4 (3-85)||(50548228-50548310)
chr4 (1-83)||(52239904-52239986)
chr4 (1-86)||(10167452-10167537)
chr4 (1-84)||(49344015-49344099)
chr4 (1-85)||(53205488-53205572)
chr4 (1-99)||(4871354-4871453)
chr4 (1-120)||(23203924-23204042)
chr4 (10-116)||(54484349-54484455)
chr4 (10-84)||(33232703-33232777)
chr4 (15-83)||(23317290-23317358)
chr4 (1-85)||(53435758-53435842)
chr4 (10-57)||(669678-669725)
chr4 (1-38)||(33231416-33231453)
chr4 (1-86)||(50546933-50547018)
chr4 (9-86)||(53204396-53204473)
[»] chr1 (30 HSPs)
chr1 (1-120)||(27814319-27814438)
chr1 (1-107)||(46111471-46111577)
chr1 (1-95)||(45585004-45585098)
chr1 (1-84)||(52628879-52628962)
chr1 (1-85)||(15072795-15072879)
chr1 (1-105)||(24499640-24499744)
chr1 (1-99)||(50444689-50444787)
chr1 (1-85)||(14470883-14470967)
chr1 (1-85)||(15071369-15071453)
chr1 (1-85)||(44278354-44278438)
chr1 (1-120)||(49802866-49802984)
chr1 (1-120)||(35943417-35943536)
chr1 (1-94)||(15234037-15234130)
chr1 (1-62)||(34351984-34352045)
chr1 (1-119)||(14477762-14477880)
chr1 (1-110)||(16963861-16963969)
chr1 (1-86)||(23091378-23091463)
chr1 (1-84)||(41872603-41872686)
chr1 (29-120)||(46110337-46110427)
chr1 (1-86)||(16123314-16123399)
chr1 (1-83)||(52627542-52627625)
chr1 (1-95)||(44276149-44276243)
chr1 (1-86)||(46467173-46467258)
chr1 (1-84)||(15232779-15232862)
chr1 (9-84)||(50442659-50442734)
chr1 (1-83)||(51042350-51042431)
chr1 (1-57)||(42245920-42245976)
chr1 (1-38)||(33369247-33369284)
chr1 (10-95)||(49801653-49801737)
chr1 (10-38)||(16965179-16965207)
[»] chr7 (41 HSPs)
chr7 (1-107)||(47456358-47456464)
chr7 (1-120)||(32256366-32256484)
chr7 (1-119)||(47454364-47454481)
chr7 (2-85)||(43460828-43460911)
chr7 (1-95)||(32255016-32255110)
chr7 (1-85)||(6173455-6173539)
chr7 (1-85)||(33096896-33096980)
chr7 (1-84)||(4300054-4300137)
chr7 (1-120)||(11501207-11501325)
chr7 (1-84)||(30333312-30333395)
chr7 (1-120)||(43459482-43459600)
chr7 (1-84)||(45455378-45455461)
chr7 (1-95)||(47059135-47059229)
chr7 (1-83)||(30334648-30334726)
chr7 (1-85)||(40508405-40508489)
chr7 (1-95)||(30310148-30310243)
chr7 (1-84)||(32602960-32603043)
chr7 (1-84)||(40509740-40509823)
chr7 (1-84)||(22115170-22115253)
chr7 (1-85)||(45454065-45454149)
chr7 (1-120)||(22538819-22538937)
chr7 (1-95)||(47060470-47060564)
chr7 (9-89)||(13564240-13564320)
chr7 (1-120)||(41079806-41079923)
chr7 (1-99)||(40812604-40812702)
chr7 (1-99)||(41078783-41078881)
chr7 (1-85)||(3414839-3414923)
chr7 (1-43)||(11344534-11344576)
chr7 (9-95)||(22336014-22336100)
chr7 (1-68)||(33779106-33779173)
chr7 (1-62)||(30311497-30311558)
chr7 (1-84)||(4298740-4298823)
chr7 (15-83)||(5095125-5095193)
chr7 (10-85)||(22537595-22537670)
chr7 (1-84)||(35664287-35664370)
chr7 (9-99)||(13562857-13562947)
chr7 (1-55)||(38539698-38539752)
chr7 (9-86)||(3413567-3413644)
chr7 (1-38)||(24281101-24281138)
chr7 (1-38)||(25533215-25533252)
chr7 (1-85)||(40738843-40738928)
[»] chr2 (36 HSPs)
chr2 (1-85)||(43033109-43033193)
chr2 (1-120)||(17460655-17460773)
chr2 (1-95)||(28562804-28562898)
chr2 (1-120)||(11315960-11316078)
chr2 (1-84)||(43034477-43034560)
chr2 (1-83)||(17459280-17459362)
chr2 (1-85)||(7437766-7437850)
chr2 (1-120)||(32470546-32470664)
chr2 (1-85)||(11317373-11317457)
chr2 (1-85)||(32469175-32469260)
chr2 (1-83)||(28561395-28561477)
chr2 (1-95)||(29219412-29219506)
chr2 (1-95)||(29332711-29332805)
chr2 (1-95)||(18617001-18617095)
chr2 (1-85)||(42641866-42641949)
chr2 (1-99)||(6030461-6030559)
chr2 (1-85)||(7436494-7436577)
chr2 (1-120)||(18615543-18615661)
chr2 (1-120)||(29220847-29220965)
chr2 (1-120)||(29334146-29334264)
chr2 (1-78)||(36010604-36010681)
chr2 (1-84)||(34468985-34469068)
chr2 (1-95)||(11547686-11547780)
chr2 (1-86)||(6030632-6030717)
chr2 (1-84)||(1085394-1085475)
chr2 (1-57)||(2277502-2277558)
chr2 (15-83)||(2384477-2384545)
chr2 (15-83)||(40322992-40323060)
chr2 (8-95)||(34512848-34512935)
chr2 (1-83)||(44192453-44192535)
chr2 (1-38)||(21664830-21664867)
chr2 (1-38)||(35903535-35903572)
chr2 (11-84)||(36011648-36011721)
chr2 (1-38)||(44191163-44191200)
chr2 (15-83)||(8265572-8265640)
chr2 (1-85)||(12359684-12359768)
[»] chr3 (48 HSPs)
chr3 (1-99)||(18197174-18197272)
chr3 (1-85)||(53194875-53194959)
chr3 (1-119)||(34818113-34818230)
chr3 (1-134)||(38240933-38241065)
chr3 (1-85)||(38242521-38242605)
chr3 (1-81)||(12107992-12108072)
chr3 (1-81)||(40244214-40244294)
chr3 (9-124)||(10730920-10731034)
chr3 (1-84)||(18458663-18458746)
chr3 (1-82)||(37736089-37736170)
chr3 (1-94)||(53624357-53624450)
chr3 (1-116)||(50809448-50809563)
chr3 (1-116)||(50810808-50810923)
chr3 (1-116)||(50864941-50865056)
chr3 (1-116)||(50866299-50866414)
chr3 (1-98)||(27837947-27838044)
chr3 (1-86)||(53420343-53420428)
chr3 (9-86)||(53421765-53421842)
chr3 (1-85)||(41544689-41544773)
chr3 (1-85)||(3208511-3208595)
chr3 (1-84)||(36176512-36176596)
chr3 (1-85)||(40364346-40364430)
chr3 (1-95)||(53187586-53187679)
chr3 (1-98)||(35372150-35372247)
chr3 (1-83)||(18442279-18442358)
chr3 (1-83)||(19487353-19487432)
chr3 (9-85)||(53614278-53614354)
chr3 (1-84)||(37735333-37735416)
chr3 (9-124)||(53612906-53613020)
chr3 (1-62)||(34819312-34819373)
chr3 (1-84)||(23443463-23443546)
chr3 (28-95)||(36175317-36175384)
chr3 (9-95)||(10732124-10732210)
chr3 (29-85)||(12106629-12106685)
chr3 (15-83)||(37981662-37981730)
chr3 (15-83)||(44175625-44175693)
chr3 (1-123)||(24403266-24403388)
chr3 (1-120)||(41263665-41263783)
chr3 (1-84)||(41264659-41264742)
chr3 (1-39)||(3209982-3210020)
chr3 (1-99)||(40745457-40745555)
chr3 (1-38)||(26887607-26887644)
chr3 (1-38)||(35370940-35370977)
chr3 (1-86)||(38247480-38247565)
chr3 (1-37)||(12105317-12105353)
chr3 (8-84)||(28909611-28909687)
chr3 (1-124)||(42684903-42685026)
chr3 (15-83)||(44182323-44182391)
[»] scaffold0031 (2 HSPs)
scaffold0031 (1-85)||(125238-125322)
scaffold0031 (1-85)||(123996-124080)
[»] chr8 (42 HSPs)
chr8 (1-85)||(26696559-26696643)
chr8 (1-85)||(22551034-22551117)
chr8 (1-120)||(30786703-30786823)
chr8 (1-85)||(32798537-32798621)
chr8 (1-95)||(44076358-44076452)
chr8 (1-86)||(8570145-8570230)
chr8 (1-116)||(13116357-13116471)
chr8 (1-124)||(41629735-41629857)
chr8 (1-110)||(28418833-28418942)
chr8 (1-99)||(32693857-32693955)
chr8 (1-95)||(42870840-42870934)
chr8 (1-110)||(30787581-30787689)
chr8 (3-99)||(4810498-4810594)
chr8 (1-116)||(28420148-28420263)
chr8 (1-81)||(32797165-32797245)
chr8 (1-84)||(6397810-6397893)
chr8 (1-120)||(45279707-45279825)
chr8 (1-99)||(42100097-42100195)
chr8 (1-99)||(45281180-45281277)
chr8 (1-95)||(17339544-17339638)
chr8 (1-79)||(32695286-32695364)
chr8 (1-99)||(42872180-42872278)
chr8 (1-86)||(211622-211707)
chr8 (1-86)||(240549-240634)
chr8 (1-86)||(725245-725330)
chr8 (1-86)||(793904-793989)
chr8 (1-86)||(8571621-8571706)
chr8 (1-89)||(13117634-13117722)
chr8 (1-68)||(13197963-13198030)
chr8 (1-84)||(17338068-17338151)
chr8 (10-85)||(26697837-26697912)
chr8 (14-85)||(29103527-29103598)
chr8 (1-95)||(42098590-42098683)
chr8 (1-99)||(42877646-42877744)
chr8 (10-95)||(6398492-6398577)
chr8 (1-62)||(41630152-41630213)
chr8 (15-83)||(416560-416628)
chr8 (5-84)||(29104371-29104450)
chr8 (1-56)||(45437516-45437571)
chr8 (1-57)||(17702308-17702364)
chr8 (15-83)||(37400839-37400907)
chr8 (1-53)||(41743652-41743704)
[»] scaffold0077 (2 HSPs)
scaffold0077 (1-120)||(52619-52737)
scaffold0077 (1-95)||(54180-54274)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-99)||(109736-109834)
scaffold0034 (1-85)||(108540-108624)
[»] scaffold1152 (1 HSPs)
scaffold1152 (10-99)||(2467-2556)
[»] chr6 (26 HSPs)
chr6 (1-116)||(232203-232316)
chr6 (1-85)||(6452516-6452600)
chr6 (1-85)||(6452311-6452395)
chr6 (1-81)||(34024073-34024153)
chr6 (1-68)||(34023913-34023980)
chr6 (1-85)||(7311730-7311813)
chr6 (9-104)||(17839126-17839220)
chr6 (9-120)||(23397325-23397435)
chr6 (1-123)||(5186595-5186716)
chr6 (1-124)||(7310303-7310425)
chr6 (1-83)||(15730036-15730119)
chr6 (9-104)||(29380226-29380320)
chr6 (1-95)||(6702866-6702959)
chr6 (1-86)||(2687257-2687342)
chr6 (9-85)||(23392249-23392325)
chr6 (1-84)||(6701407-6701490)
chr6 (1-84)||(27080951-27081034)
chr6 (1-95)||(18346746-18346839)
chr6 (1-95)||(29722690-29722784)
chr6 (1-62)||(27082172-27082233)
chr6 (1-85)||(2687929-2688013)
chr6 (10-84)||(12669759-12669833)
chr6 (1-38)||(233616-233653)
chr6 (1-38)||(5187674-5187711)
chr6 (15-79)||(13847914-13847978)
chr6 (8-84)||(27967055-27967131)
[»] scaffold0118 (1 HSPs)
scaffold0118 (1-95)||(43570-43664)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-86)||(18839-18924)
[»] scaffold0201 (1 HSPs)
scaffold0201 (10-84)||(21163-21237)
[»] scaffold0019 (1 HSPs)
scaffold0019 (9-95)||(63125-63212)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-122)||(127460-127581)
[»] scaffold0035 (1 HSPs)
scaffold0035 (15-83)||(83210-83278)
[»] scaffold2071 (1 HSPs)
scaffold2071 (1-57)||(714-770)
[»] scaffold1251 (1 HSPs)
scaffold1251 (1-57)||(1118-1174)


Alignment Details
Target: chr5 (Bit Score: 92; Significance: 1e-44; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 325274 - 325156
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||||| |||    
T  325274 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaagttttcctccgtttgccaaataaatcccgactgttaac-ttt 325176  T
Q  101 aactctaaatttctatggtg 120  Q
    |||||||||| |||||||||    
T  325175 aactctaaatgtctatggtg 325156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 22047759 - 22047867
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||| |||||||||||||||| | |||||||  |||    
T  22047759 aatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcattttttcctccgtttgccaaataaatcctggctgttaa-gttt 22047857  T
Q  101 aactctaaat 110  Q
    ||||||||||    
T  22047858 aactctaaat 22047867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 39605558 - 39605461
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactt 98  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||  ||| ||||| |||||||||||||||| ||| ||||||||    
T  39605558 aatttcaagttttcattttggtcccacaattaataaaacatacgttttggtccctcagattttcctccgtttgccaaataaatcctgacggttaactt 39605461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 22049225 - 22049131
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||  |||| ||||||||||||  |||||||    
T  22049225 aatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctgtttggcaaataaatccctgctgttaa 22049131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 39603880 - 39603974
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||| ||||| |||||||||||||||  |||||||||    
T  39603880 aatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtttgccaaataaatcatgactgttaa 39603974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27705405 - 27705307
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||||||||||  ||| ||||| |||||||||||||| | ||| |||||||||    
T  27705405 aatttcaagttttcattttggtcatacaattaataaaacgtacgttttggtccctcagattttcctccttttgccaaataaatacagacagttaacttt 27705307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 30859261 - 30859181
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||| ||| ||||  ||||||||||||    
T  30859261 aatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcacattttcctctgtttgccaaataa 30859181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 30912251 - 30912133
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||| ||||||||||||||||||||||||||||||    | |||| ||||||||| |||  |||| ||||||||||||||||| | ||||||| |||    
T  30912251 aatttcatgttttcattttggtcccacaattaataaaagtggcgttttagtccctcacctttttctccgtttgccaaataaatcccaagtgttaac-ttt 30912153  T
Q  101 aactctaaatttctatggtg 120  Q
    ||||| |||| |||||||||    
T  30912152 aactccaaatatctatggtg 30912133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 30857827 - 30857942
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||||||||| |||  ||| ||||| |||| ||||||||||   || |||||| |||    
T  30857827 aattttaagttttcattttggtcccacaattaataaaacgtatgttttggtccttcagattttcctccttttgtcaaataaatcttaacagttaac-ttt 30857925  T
Q  101 aactctaaatttctatg 117  Q
    |||| ||||| ||||||    
T  30857926 aactttaaatgtctatg 30857942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 30910768 - 30910866
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    ||||||| ||||||||||||||||||||||||||||||    | |||| ||||||||| ||| ||||  ||| ||||||||||| ||||||||||||||    
T  30910768 aatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctctgtttaccaaataaatctcgactgttaacttt 30910866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15941300 - 15941380
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataa 81  Q
    ||||| |||||||||||||| | ||| ||||||||||||||||| ||||||||||||||||| | ||| |||| |||||||    
T  15941300 aattttaagttttcattttgattccataattaataaaacgtaccatttggtccctcactttttcttccgtttgtcaaataa 15941380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 24503220 - 24503296
Alignment:
Q  10 ttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| | ||||| |||  ||||||||| |||||||    
T  24503220 ttttcattttggtcccataagtaataaaacgtaccttttggtcccttagttttctctctgtttgccaaaaaaatccc 24503296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 24509116 - 24509040
Alignment:
Q  10 ttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| | ||||| |||  ||||||||| |||||||    
T  24509116 ttttcattttggtcccataagtaataaaacgtaccttttggtcccttagttttctctctgtttgccaaaaaaatccc 24509040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 8521282 - 8521380
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    |||||||||||||||||||||||||| || |||||||||  |  |||||||||||||| |||  |||| |  | ||||||||||||||| |||||||||    
T  8521282 aatttcaagttttcattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgtcagtcaaataaatcccgacggttaacttt 8521380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 22308888 - 22308804
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||| |||||||||||||||||| ||||||||||||   | |||| ||||||||| |||  |||| ||||||||||||||||    
T  22308888 aatttcatgttttcattttggtcccataattaataaaacaggcgttttagtccctcacattttgctccgtttgccaaataaatcc 22308804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 1010453 - 1010355
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    ||||||||||||| |||||||||||| || |||||||||  |  |||||||||||||| |||  |||| |  | ||||||||||||||| |||||||||    
T  1010453 aatttcaagtttttattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgtcagtcaaataaatcccgacggttaacttt 1010355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 34894176 - 34894261
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    |||||| | ||||||||||||||||  || |||||||| |||||||||||||||| | ||||  |||| ||||||||| |||||||    
T  34894176 aatttccatttttcattttggtcccgtaagtaataaaaagtaccttttggtcccttagttttgtctccgtttgccaaaaaaatccc 34894261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 324140 - 324185
Alignment:
Q  75 caaataaatcccgactgttaacttttaactctaaatttctatggtg 120  Q
    ||||||||| || ||||||||||||||||||||||| |||||||||    
T  324140 caaataaattccaactgttaacttttaactctaaatgtctatggtg 324185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 22307535 - 22307620
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    ||||||| |||||||||||||| ||| ||||||||||||     |||| |||||||||||||  |||  |||||||||||||||||    
T  22307535 aatttcatgttttcattttggttccataattaataaaacaggtgttttagtccctcactttttgctctgtttgccaaataaatccc 22307620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 28393272 - 28393340
Alignment:
Q  15 attttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||||||| |||||||||||||||  || |||| |||| ||||||||||| |  ||||||||||||||    
T  28393272 attttggtctcacaattaataaaactcacgttttagtccttcacttttcccacagtttgccaaataaat 28393340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 33174049 - 33173965
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||| |||||||||||| ||||||| |||||||||    | |||| ||||||||| ||| ||||  ||||||||||||||||    
T  33174049 aatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctctgtttgccaaataaatcc 33173965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 34899031 - 34898963
Alignment:
Q  10 ttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaa 78  Q
    ||||||||||||||||| || |||||||| |||| ||||||||||| | ||||  |||| |||||||||    
T  34899031 ttttcattttggtcccataagtaataaaaagtacattttggtcccttagttttgtctccgtttgccaaa 34898963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8523835 - 8523797
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaac 39  Q
    |||||||||||||||||||||||||| || |||||||||    
T  8523835 aatttcaagttttcattttggtcccataactaataaaac 8523797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9169613 - 9169651
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaac 39  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  9169613 aatttcaagttttcattttagtcccataattaataaaac 9169651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11262283 - 11262321
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaac 39  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  11262283 aattttaagttttcattttagtcccacaattaataaaac 11262321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 20538080 - 20538117
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaa 38  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  20538080 aatttcaaattttcattttggtcccataattaataaaa 20538117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 32757852 - 32757908
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctca 57  Q
    |||||| ||||||||||||||||||| || |||||||||  |  |||||||||||||    
T  32757852 aatttccagttttcattttggtcccataaataataaaactcatgttttggtccctca 32757908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 41798036 - 41798004
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaa 33  Q
    ||||||||||||| |||||||||||||||||||    
T  41798036 aatttcaagtttttattttggtcccacaattaa 41798004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 1188870 - 1188993
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||  ||||||||||    
T  1188870 aatttcaagtttttattttggtcccacaattaataaaacgtacattttggtccctcactttttcctccgtttgccaaataaatcccgaacgttaactttt 1188969  T
Q  101 aactctaaatttctatggtgaacc 124  Q
    ||| |||||| |||||||||||||    
T  1188970 aaccctaaatgtctatggtgaacc 1188993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1829780 - 1829895
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||| | |||| ||||||||| ||||||||||||||||    
T  1829780 aatttcaagttttcattttggtcccacaattaataaaacgtatcttttagtccctcactttttcctacgtttgtcaaataaattccgactgttaactttt 1829879  T
Q  101 aactctaaatttctat 116  Q
    |||||||||| |||||    
T  1829880 aactctaaatgtctat 1829895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1587209 - 1587324
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||| || |||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||  ||||||||||    
T  1587209 aattttaaattttcattttagtctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatcccgatggttaactttt 1587308  T
Q  101 aactctaaatttctat 116  Q
    |||||||||| |||||    
T  1587309 aactctaaatgtctat 1587324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 44503767 - 44503645
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||| |||||||||||||||||| ||||  |||||||||||||||||||| ||||||||||    
T  44503767 aatttcaagtttttattttggtctcacaattaataaa-cgtacattttggtccctcactttttcctctgtttgccaaataaatcccgaccgttaactttt 44503669  T
Q  101 aactctaaatttctatggtgaacc 124  Q
    ||| |||||| |||||||||||||    
T  44503668 aaccctaaatgtctatggtgaacc 44503645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 42871122 - 42871216
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    |||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  42871122 aatttcaaattttcattttgatcccacaattaataaaacgtacgttttggtccctcactttttcctccgtttgccaaataaatcctgactgttaa 42871216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 4129020 - 4129117
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactt 98  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||  |||| |||||||||||||||||||| ||||||||    
T  4129020 aatttcaagttttcattttggtcccacaattaataaaatgtacattttggtcccttacttttttctccgtttgccaaataaatcccgaccgttaactt 4129117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 37882861 - 37882983
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc--ccgactgttaactt 98  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||    ||||||||||||    
T  37882861 aatttcaagttttcattttagtcccacaattaataaaacgtaccttttggtccctcaccttttcctccgtttgccaaataaatcatttgactgttaactt 37882960  T
Q  99 ttaactctaaatttctatggtgaa 122  Q
    | | ||| |||| |||||||||||    
T  37882961 taatctc-aaatatctatggtgaa 37882983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 393727 - 393628
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc-gactgttaacttt 99  Q
    |||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||  |||| ||||||||||||||||| |||||||||||||    
T  393727 aatttcaaattttcattttggtcccacaattaataaaaagtatcttttggtccctcacttttttctccgtttgccaaataaatcccggactgttaacttt 393628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 390244 - 390338
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| || | ||||| |||||||||||||||| |||||||||    
T  390244 aatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcatttcttcctccgtttgccaaataaatcctgactgttaa 390338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 24426366 - 24426448
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||    
T  24426366 aatttcaagttttcattttggtctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaaaaaat 24426448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 2310950 - 2311065
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||| |||||  |||||||||||||||  || |||||| |||    
T  2310950 aatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcagattttcctccgattgccaaataaatcctaacagttaac-ttt 2311048  T
Q  101 aactctaaatttctatg 117  Q
    |||| ||||| ||||||    
T  2311049 aactttaaatgtctatg 2311065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6349642 - 6349555
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccga 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||| ||||||| |||||||    
T  6349642 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaccttttcttccgtttaccaaatagatcccga 6349555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 6348182 - 6348264
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||  |||| |||||||||    
T  6348182 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggttcctcactttttcctctgtttgtcaaataaat 6348264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1831352 - 1831267
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||| |||||||||  ||||||||||||    
T  1831352 aatttcaagttttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccatttttcaaataaatccc 1831267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 52963596 - 52963714
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||||||||||||||||||| ||||||||||||| ||||  |||||||||||||  |||  |||| |||| |||||||||| ||||||||||| |||    
T  52963596 aatttcaagttttcattttggtctcacaattaataaatcgtatgttttggtccctcaagtttttctccgtttgtcaaataaatctcgactgttaac-ttt 52963694  T
Q  101 aactctaaatttctatggtg 120  Q
    ||||| |||| |||||||||    
T  52963695 aactccaaatgtctatggtg 52963714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 40792778 - 40792890
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||  |||  |||| |||||||||||||||||||  |||||| |||    
T  40792778 aattttaagttttcattttggtcccacaattaataaaacatacattttggtccctcagatttttctccgtttgccaaataaatcccga--gttaac-ttt 40792874  T
Q  101 aactctaaatttctat 116  Q
    |||| ||||| |||||    
T  40792875 aactttaaatgtctat 40792890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 42810292 - 42810208
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||  ||||||||| ||| ||||| ||||||||||||||||    
T  42810292 aatttcaacttttcattttggtcccacaattaataaaacgtacttttaagtccctcacattttcctccgtttgccaaataaatcc 42810208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 52241244 - 52241125
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||| |||||||||||| | |||||||||||||||||||| ||||| | |||||  ||| ||||| |||||||||||||| ||||| |||||| |||    
T  52241244 aatttcatgttttcattttgattccacaattaataaaacgtacgttttgattcctcatcttttcctccgtttgccaaataaattccgaccgttaac-ttt 52241146  T
Q  101 aactctaaatttctatggtga 121  Q
    ||||| |||| ||||||||||    
T  52241145 aactccaaatatctatggtga 52241125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 2312571 - 2312488
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    |||||||||||| |||||| ||||||||||||||||||||||| |||  ||||||||||||| ||||| |||||||||||||||    
T  2312571 aatttcaagtttccattttagtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgtttgccaaataaatc 2312488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 37884366 - 37884244
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||| || |||||||||| |||||| ||||||||||| |||||||||||||| | |||||| ||||| |||||||||||||||| |||||||||  |||    
T  37884366 aattttaaattttcatttttgtcccataattaataaaatgtaccttttggtcctttactttttcctccgtttgccaaataaatccagactgttaa-gttt 37884268  T
Q  101 aactctaaatttctatggtgaacc 124  Q
    ||| | |||| | |||||||||||    
T  37884267 aaccccaaatatatatggtgaacc 37884244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 31965862 - 31965946
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||||||||| ||| |||||| |||||||| |||| |||| |||||||||||||||||| ||||| ||||||||||||||||    
T  31965862 aatttcaagtttttattctggtcctacaattaagaaaatgtacattttggtccctcactttttcctccgtttgccaaataaatcc 31965946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 31968481 - 31968397
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||| || ||||||||||||||| |||||||||||||||||| ||||||||| |||||||| ||||  ||||||||||||||||    
T  31968481 aattttaatttttcattttggtcctacaattaataaaacgtacgttttggtccttcactttttcctctgtttgccaaataaatcc 31968397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 27851021 - 27850954
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctcc 68  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||| |||||    
T  27851021 aatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcaatttttcctcc 27850954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 42872379 - 42872308
Alignment:
Q  10 ttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataa 81  Q
    ||||||||||||||||| ||||||||||| |||| |||||||||||||||||| ||||| ||||||||||||    
T  42872379 ttttcattttggtcccataattaataaaatgtacgttttggtccctcactttttcctccgtttgccaaataa 42872308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1794438 - 1794522
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||||||||||||||| || ||||||||||||||  ||||||||| |||||||||||| ||||  |||| |||||||||||    
T  1794438 aatttcaagttttcattttgatctcacaattaataaaatataccttttgatccctcactttttcctctgtttgtcaaataaatcc 1794522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 44501545 - 44501628
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||||||||||||||| |||||||| |||||||||||||||| |||  |||||||||||||  |||  |||||||||||||||    
T  44501545 aatttcaagttttcattctggtcccataattaataaaacgtacgtttaagtccctcacttttttctctgtttgccaaataaatc 44501628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 11968538 - 11968636
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||| ||||  |||||||| ||| |||| ||||||    
T  11968538 aatttcaagttttcattttggtctcacaattaataaaacatactttttggtccctcagattttgctccgtttgtaaaataaattccggctgtcaacttt 11968636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 27847705 - 27847799
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    ||||||||||||| |||||||||||||||||||||||| |||  ||| ||||||| | |||| | ||| |||||||||||||||| ||| |||||    
T  27847705 aatttcaagtttttattttggtcccacaattaataaaatgtatttttcggtcccttaatttttcttccgtttgccaaataaatccagacggttaa 27847799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 49342646 - 49342728
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||| |||||||||||||| ||||||||||||||||| |||| |||  ||||||||||||| ||||||||||  ||||||||    
T  49342646 aattttaagttttcattttgatcccacaattaataaaatgtacgtttaagtccctcactttttcctccatttgttaaataaat 49342728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1190281 - 1190196
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    ||||| |||||||||||||||||||| |||||||||||||||| |||  || ||||||||||  |||  |||||||||||||||||    
T  1190281 aattttaagttttcattttggtcccataattaataaaacgtacgtttaagtacctcacttttttctctgtttgccaaataaatccc 1190196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 10168872 - 10168788
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||| ||||||||||||||||||||||||||||||    | |||| ||||||||| ||| ||||| ||||||||||||||||    
T  10168872 aatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatcc 10168788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 11438657 - 11438574
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||| ||||||| ||||||||| || ||||||||||||   | |||||||||||||||||| ||||||||||| |||||||||    
T  11438657 aatttgaagtttttattttggtctcataattaataaaacactcgttttggtccctcactttttcctccatttgctaaataaatc 11438574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 1588178 - 1588096
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||| ||||||||||||| |||||||||||||||||| |||| |||   |||||||||||| ||||| ||| ||||||||||    
T  1588178 aattttaagttttcattttagtcccacaattaataaaatgtacgtttaaatccctcactttttcctccgtttaccaaataaat 1588096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 7707615 - 7707713
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    ||||||| ||||||||||||||||||||||||||||||   || |||| |||| |||| ||| ||||  |||||||||||||||| ||| |||| ||||    
T  7707615 aatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccatcacattttcctctgtttgccaaataaatcctgacggttagcttt 7707713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 23201873 - 23201967
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    ||||||| ||||| |||||||||||||| |||||||||    | |||||||||||||| ||| ||||| ||||||||||||||||| || |||||    
T  23201873 aatttcatgtttttattttggtcccacatttaataaaaatggcattttggtccctcaccttttcctccgtttgccaaataaatcccaaccgttaa 23201967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 53432089 - 53432212
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc-gactgttaacttt 99  Q
    |||||||||||||||||||||||||| || ||||||||| ||  |||||||||||||  ||| ||| | || | |||||||||||| ||| |||||  ||    
T  53432089 aatttcaagttttcattttggtcccataagtaataaaacttatgttttggtccctcaagtttgccttcgttggtcaaataaatccctgacggttaa-gtt 53432187  T
Q  100 taactctaaatttctatggtgaacc 124  Q
    |||| | |||| |||||||||||||    
T  53432188 taaccccaaatgtctatggtgaacc 53432212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 54485634 - 54485519
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc-ccgactgttaacttt 99  Q
    |||||||||||||||||||| ||||| |||||||||||| | | ||||| |||||||  ||| | ||| ||||||||||||||| |  ||| ||||| ||    
T  54485634 aatttcaagttttcattttgatcccataattaataaaacattcgttttgatccctcaagttttcatccgtttgccaaataaatcacaaactattaac-tt 54485536  T
Q  100 taactctaaatttctat 116  Q
    ||||||||||| |||||    
T  54485535 taactctaaatgtctat 54485519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 7708869 - 7708759
Alignment:
Q  9 gttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttttaactctaa 108  Q
    |||||||||||||| | |||||||||||||    | |||| ||||||||| |||  |||  ||||||||||||||||| | ||||||| |||||||||||    
T  7708869 gttttcattttggttctacaattaataaaagtggcgttttagtccctcacctttttctctgtttgccaaataaatcccaagtgttaac-tttaactctaa 7708771  T
Q  109 atttctatggtg 120  Q
    || |||||||||    
T  7708770 atatctatggtg 7708759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 50548310 - 50548228
Alignment:
Q  3 tttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||| |||||||||||||||||||||||||||| |   || |||| ||||||||| ||| ||||  ||||||||||||||||    
T  50548310 tttcatgttttcattttggtcccacaattaataagaataacgttttagtccctcacattttcctctgtttgccaaataaatcc 50548228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 52239904 - 52239986
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    |||||||| |||| |||||| |||||||||||||||||||||| ||||||| | |||  |||  |||| ||||||||||||||    
T  52239904 aatttcaaatttttattttgatcccacaattaataaaacgtacgttttggttcttcaggtttttctccgtttgccaaataaat 52239986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 10167452 - 10167537
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    ||||||| |||||||||||||| |||||||||||||||  | | |||| ||||||||  ||| ||||| |||| ||||||||||||    
T  10167452 aatttcatgttttcattttggtaccacaattaataaaaattgcattttagtccctcatattttcctccgtttgtcaaataaatccc 10167537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 49344099 - 49344015
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccc-tcacttttccctccatttgccaaataaatc 84  Q
    ||||| ||| ||| |||||||||||||||||||||||||||   |||  ||||| |||||||| ||||| |||||||||||||||    
T  49344099 aattttaagcttttattttggtcccacaattaataaaacgtgggtttaagtcccttcactttttcctccgtttgccaaataaatc 49344015  T

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Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 53205572 - 53205488
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||  |||||||||| ||||||||||||| ||||    | |||| ||||||||||||| ||||| ||||||||||||||||    
T  53205572 aatttcagattttcattttcgtcccacaattaaaaaaataggcgttttagtccctcactttttcctccgtttgccaaataaatcc 53205488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 4871453 - 4871354
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc-gactgttaacttt 99  Q
    ||||||| |||||||||||||| | |||||||||||||||||  |||  ||||| ||| |||  |||| |||| |||||||||||| || ||||||||||    
T  4871453 aatttcatgttttcattttggttctacaattaataaaacgtatgtttaagtcccccacgtttttctccgtttgtcaaataaatccctgaatgttaacttt 4871354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 23204042 - 23203924
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    |||||||  ||||||||||||||||||| |||||||||    | ||||||||| |||  |||  |||| |||||||| |||||||| | | ||||| |||    
T  23204042 aatttcatattttcattttggtcccacatttaataaaaatggcgttttggtccgtcatctttttctccgtttgccaattaaatcccaagtattaac-ttt 23203944  T
Q  101 aactctaaatttctatggtg 120  Q
    |||||||||| |||||||||    
T  23203943 aactctaaatatctatggtg 23203924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 54484349 - 54484455
Alignment:
Q  10 ttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc-ccgactgttaacttttaactctaa 108  Q
    |||| |||||||| ||| |||||||||||||| | ||||||||||| |  ||| ||||  ||||||||||||||| |  ||||||||| |||||||||||    
T  54484349 tttttattttggtaccataattaataaaacgttcgttttggtccctaaaattttcctctgtttgccaaataaatctcaaactgttaac-tttaactctaa 54484447  T
Q  109 atttctat 116  Q
    || |||||    
T  54484448 atgtctat 54484455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 33232777 - 33232703
Alignment:
Q  10 ttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    |||| ||||||||||||||||||||||||    | |||| ||||||||| ||| ||||| |||||||||||||||    
T  33232777 tttttattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatc 33232703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 23317358 - 23317290
Alignment:
Q  15 attttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||||||| |||||||||||||||  || |||| |||| ||||||||||| |  ||||||||||||||    
T  23317358 attttggtctcacaattaataaaactcacgttttagtccttcacttttcccacagtttgccaaataaat 23317290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 53435842 - 53435758
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||||||||||||||||||||| || |||||||||  |  |||||| ||||||  ||| ||||| || | |||||||||||    
T  53435842 aatttcaagttttcattttggtcccataagtaataaaactcatgttttggcccctcaagtttacctccgttggtcaaataaatcc 53435758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 669725 - 669678
Alignment:
Q  10 ttttcattttggtcccacaattaataaaacgtaccttttggtccctca 57  Q
    ||||||||||||||||| ||||||||||||  || |||||||||||||    
T  669725 ttttcattttggtcccataattaataaaactcacattttggtccctca 669678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 33231416 - 33231453
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaa 38  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  33231416 aatttcatgttttcattttagtcccacaattaataaaa 33231453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 50546933 - 50547018
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    ||||||| || |||||||| ||||||||||||||||||    | |||| ||||||||  ||| || || |||||||||||||||||    
T  50546933 aatttcatgtcttcattttagtcccacaattaataaaaatggcgttttagtccctcatcttttccaccgtttgccaaataaatccc 50547018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 53204396 - 53204473
Alignment:
Q  9 gttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    |||||||||||| || |||||||||||||||   | |||| || ||||| ||||  |||| |||||||||||||||||    
T  53204396 gttttcattttgatctcacaattaataaaacaggcgttttagttcctcaattttttctccgtttgccaaataaatccc 53204473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 7e-40; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 27814319 - 27814438
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| |||| ||||  |||||||||||||||||||| ||||||||||    
T  27814319 aatttcaagttttcattttagtcctataattaataaaacgtaccttttggtccctcattttttcctctgtttgccaaataaatcccgacggttaactttt 27814418  T
Q  101 aactctaaatttctatggtg 120  Q
    |||||||||| |||||||||    
T  27814419 aactctaaatgtctatggtg 27814438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 46111577 - 46111471
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| ||| | |||||||||||||||||||||||||||||||    
T  46111577 aatttcaagtttttattttggtcccacaattaataaaacgtaccttttggttcctcattttttccttcgtttgccaaataaatcccgactgttaactttt 46111478  T
Q  101 aactcta 107  Q
    |||||||    
T  46111477 aactcta 46111471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 45585098 - 45585004
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||| ||| |||||    
T  45585098 aatttcaagttttcattttggtctcacaattaataaaacgtaccttttggtccttcactttttcctccgtttgccaaataaatcctgaccgttaa 45585004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 52628962 - 52628879
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  52628962 aatttcaagttttaattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgtttgccaaataaatc 52628879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 15072879 - 15072795
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||| ||||| ||||||||||||||||    
T  15072879 aatttcaagttttcattttggtcccacaattaataaaacgtacattttggtcccttattttttcctccgtttgccaaataaatcc 15072795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 24499744 - 24499640
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||||||||||||||||||| |||||||||||||||  || |||||||||||||||||| ||||| ||| |||||||||||| | |||| ||||||     
T  24499744 aatttcaagttttcattttggtctcacaattaataaaactcacgttttggtccctcactttttcctccgtttaccaaataaatccggtctgtcaacttta 24499645  T
Q  101 aactc 105  Q
    |||||    
T  24499644 aactc 24499640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 50444787 - 50444689
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    |||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||| |||| |||||  |||||||||||||||  || |||||||||    
T  50444787 aatttcaaattttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccgattgccaaataaatccaaaccgttaacttt 50444689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 14470883 - 14470967
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||||| ||| | ||||||||||||||||    
T  14470883 aatttcaagttttcattttggtcccacaattaataaaacgtacggttaagtccctcactttttccttcgtttgccaaataaatcc 14470967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 15071369 - 15071453
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||||||||||||||||||| || |||||||||||||||  |||||||||||||||||| ||||| ||| ||||||||||||    
T  15071369 aatttcaagttttcattttggtcacataattaataaaacgtatgttttggtccctcactttttcctccgtttaccaaataaatcc 15071453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 44278438 - 44278354
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||  |||| ||||||||||| ||||    
T  44278438 aatttcaagttttcattttggtcccacgattaataaaacgtacgttttggtccctcatttttttctccgtttgccaaatagatcc 44278354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 49802984 - 49802866
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||| ||||||||||||||||||||||||||||||   || |||| ||||||||  |||  |||| |||||||||||||||||||| |||||| ||     
T  49802984 aatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccctcatctttttctccgtttgccaaataaatcccgacggttaac-ttc 49802886  T
Q  101 aactctaaatttctatggtg 120  Q
    |||||||||| |||||||||    
T  49802885 aactctaaatgtctatggtg 49802866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 35943536 - 35943417
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc--gactgttaactt 98  Q
    |||||||| |||| ||||||||||||||||||||||||||||| ||||||| |||||||||| ||| | |||||||||||||||||  | |||||||  |    
T  35943536 aatttcaaatttttattttggtcccacaattaataaaacgtacattttggt-cctcactttttccttcgtttgccaaataaatcccctggctgttaa-gt 35943439  T
Q  99 ttaactctaaatttctatggtg 120  Q
    ||||| |||||| |||||||||    
T  35943438 ttaaccctaaatgtctatggtg 35943417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 15234130 - 15234037
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgtta 94  Q
    ||||||| ||||||||||||||||||||||||||||||    | |||| ||||||||| ||| ||||| |||||||||||||||||||||||||    
T  15234130 aatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatcccgactgtta 15234037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34352045 - 34351984
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcactttt 62  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34352045 aattttaagttttcattttggtcccacaattaataaaatgtaccttttggtccctcactttt 34351984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 14477880 - 14477762
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc--cgactgttaactt 98  Q
    ||||| ||||||||| |||| |||||||||||||||||||||| |||  |||||||||||||  |||| ||||||||||||||||  ||| ||||||  |    
T  14477880 aattttaagttttcactttgatcccacaattaataaaacgtacgtttaagtccctcacttttttctccgtttgccaaataaatccttcga-tgttaa-gt 14477783  T
Q  99 ttaactctaaatttctatggt 119  Q
    |||||||||||| ||||||||    
T  14477782 ttaactctaaatgtctatggt 14477762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16963861 - 16963969
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||| ||||||||||||||||||||||||||||||      |||| ||||||||  ||| ||||| |||||||||||||| | |||||||||| |||    
T  16963861 aatttcatgttttcattttggtcccacaattaataaaaatggtgttttagtccctcatcttttcctccgtttgccaaataaatgctgactgttaac-ttt 16963959  T
Q  101 aactctaaat 110  Q
    ||||||||||    
T  16963960 aactctaaat 16963969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 23091378 - 23091463
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    |||||||  |||||||||||||   |||||||||||||||||| |||||||| |||||||||  |||| |||||||||||||||||    
T  23091378 aatttcacattttcattttggttttacaattaataaaacgtacgttttggtcactcacttttttctccgtttgccaaataaatccc 23091463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 41872603 - 41872686
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    |||||||| ||||||||||| ||  |||||||||||||||||| |||  ||| ||||||||| ||||| |||||||||||||||    
T  41872603 aatttcaacttttcattttgatcatacaattaataaaacgtacgtttaagtctctcactttttcctccgtttgccaaataaatc 41872686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 46110337 - 46110427
Alignment:
Q  29 attaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttttaactctaaatttctatggtg 120  Q
    ||||||||||||||| |||||||| ||||  |||  |||| ||||| ||||||||| ||||||||||| ||||||||||||| |||||||||    
T  46110337 attaataaaacgtactttttggtcactcaagtttttctccgtttgctaaataaatctcgactgttaac-tttaactctaaatatctatggtg 46110427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 16123314 - 16123399
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    ||||| |||||||||||||||| |||||||||||||||   || |||| |||||||| |||| | ||| |||||||||||||||||    
T  16123314 aatttaaagttttcattttggttccacaattaataaaattcacgttttagtccctcattttttcttccgtttgccaaataaatccc 16123399  T

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Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 52627542 - 52627625
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaat-aaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| |||||| || | | |||| ||||| ||||||||| ||||    
T  52627542 aatttcaagttttcattttggtcccacaattaataaaaacatacattttggacctttaatttttcctccgtttgccaaaaaaat 52627625  T

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Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 44276149 - 44276243
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    |||||| | |||||||||||||| || |||||||||||||||| ||||| ||| ||||||||  |||  |||| ||| ||||||| |||||||||    
T  44276149 aatttccatttttcattttggtctcataattaataaaacgtacgttttgatccttcacttttttctctgtttgtcaattaaatcctgactgttaa 44276243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 46467173 - 46467258
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    |||||||||||||||||||||||||| || |||||||||  |  ||| |||||||||  ||| ||||| |||| ||||||||||||    
T  46467173 aatttcaagttttcattttggtcccataactaataaaactcatgtttcggtccctcaggtttgcctccgtttgtcaaataaatccc 46467258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 15232779 - 15232862
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||||| |||||||||||||||||| |||||||||||    | |||| ||||||||| ||| ||||  |||||||||||||||    
T  15232779 aatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctctgtttgccaaataaatc 15232862  T

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Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 50442659 - 50442734
Alignment:
Q  9 gttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||| ||||||||| ||||||||||||||||||| ||||| | |||||| ||| ||||  |||| ||||||||||    
T  50442659 gtttttattttggtctcacaattaataaaacgtacattttgattcctcaccttttcctctgtttgtcaaataaatc 50442734  T

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Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 51042431 - 51042350
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    |||||| | ||||||||||||||||||||||||||||||  || |||| |||||||  ||||  |||| ||||||||||||||    
T  51042431 aatttccaattttcattttggtcccacaattaataaaactcacgttttagtccctc-tttttttctccgtttgccaaataaat 51042350  T

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Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 42245976 - 42245920
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctca 57  Q
    ||||||||||||| |||||||| ||| ||||||||||||  | ||||||||||||||    
T  42245976 aatttcaagtttttattttggttccataattaataaaactcatcttttggtccctca 42245920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 33369284 - 33369247
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaa 38  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  33369284 aatttcaagtattcattttggtcccataattaataaaa 33369247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 49801653 - 49801737
Alignment:
Q  10 ttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    |||||||||||||||||||||||||||||      ||||| |||||||| |||  |||  |||||||||||||| |||||||||||    
T  49801653 ttttcattttggtcccacaattaataaaaatggtgttttgatccctcacgtttgtctctgtttgccaaataaat-ccgactgttaa 49801737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 38
Target Start/End: Complemental strand, 16965207 - 16965179
Alignment:
Q  10 ttttcattttggtcccacaattaataaaa 38  Q
    |||||||||||||||||||||||||||||    
T  16965207 ttttcattttggtcccacaattaataaaa 16965179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 7e-37; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 47456464 - 47456358
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| | ||  ||||||||||||||| |||||||||||||||    
T  47456464 aatttcaagttttcattttggtcccacaattaataaaacgtactttttggtccctcattttttcttctgtttgccaaataaatctcgactgttaactttt 47456365  T
Q  101 aactcta 107  Q
    |||||||    
T  47456364 aactcta 47456358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 32256484 - 32256366
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || || |||||| |||    
T  32256484 aatttcaagttttcattttggtcccataattaataaaatgtaccttttggtccctcactttttcctccatttgccaaataaattccaaccgttaac-ttt 32256386  T
Q  101 aactctaaatttctatggtg 120  Q
    ||||  |||| |||||||||    
T  32256385 aacttcaaatgtctatggtg 32256366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 47454364 - 47454481
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||  |||  || | ||||||||||||||||||||| ||||| |||    
T  47454364 aatttcaagctttcattttggtcccacaattaataaaacgtacattttggtccctcaagtttttcttcgtttgccaaataaatcccgactattaac-ttt 47454462  T
Q  101 aactctaaatttctatggt 119  Q
    |||||||||| ||||||||    
T  47454463 aactctaaatgtctatggt 47454481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 43460911 - 43460828
Alignment:
Q  2 atttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||    
T  43460911 atttgaagttttcattttggtcccacaattaataaaacgtacattttagtccctcactttttcctccatttgccaaataaatcc 43460828  T

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Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 32255016 - 32255110
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    |||||||| |||| |||||||||||| |||||||||||||||| ||||| |||||||||||| ||||| |||||||||||||||||||| |||||    
T  32255016 aatttcaaatttttattttggtcccataattaataaaacgtacattttgatccctcactttttcctccgtttgccaaataaatcccgacggttaa 32255110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6173539 - 6173455
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||||||||||||||||  |||| |||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  6173539 aatttcaagttttcattttgtacccataattaataaaacgtacattttggtccctcactttttcctccgtttgccaaataaatcc 6173455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 33096896 - 33096980
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||||||| ||||||| | ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||    
T  33096896 aatttcaagttctcattttaggcccacaattaataaaacttaccttttggtccctcactttttcctccgtttgccaaataaatcc 33096980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4300137 - 4300054
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||  |||||||||||||||    
T  4300137 aatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcactttttcctctgtttgccaaataaatc 4300054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 11501207 - 11501325
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||| |||||||||||||||||||| |||||||||    | |||| ||||||||| ||| ||||||||||||||||||||||||||||||||| |||    
T  11501207 aatttcatgttttcattttggtcccacagttaataaaaatagcattttagtccctcaccttttcctccatttgccaaataaatcccgactgttaac-ttt 11501305  T
Q  101 aactctaaatttctatggtg 120  Q
    ||||  |||| |||||||||    
T  11501306 aacttcaaatgtctatggtg 11501325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 30333312 - 30333395
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||| |||| ||||||||||    
T  30333312 aatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcatttttttctccgtttgtcaaataaatc 30333395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 43459482 - 43459600
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||  ||||||||  ||| ||||| ||||||||||||||| || |||||||  |||    
T  43459482 aatttcaagttttcattttggtcccacaattaataaaacgtgcgtttaagtccctcatgttttcctccgtttgccaaataaatctcggctgttaa-gttt 43459580  T
Q  101 aactctaaatttctatggtg 120  Q
    ||||| |||| |||||||||    
T  43459581 aactccaaatgtctatggtg 43459600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 45455461 - 45455378
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||  |||| |||||||||||||||    
T  45455461 aatttcaaattttcattttggtcccacaattaataaaacgtacattttgatccctcacttttttctccgtttgccaaataaatc 45455378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 47059135 - 47059229
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    ||||| |||||||||||||||||| ||||||||||||| |||| ||||| |||||||||||| ||||| |||||||||||||||| ||| |||||    
T  47059135 aattttaagttttcattttggtcctacaattaataaaatgtacgttttgatccctcactttttcctccgtttgccaaataaatcctgaccgttaa 47059229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 30334726 - 30334648
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    ||||||| ||||||||||||||    
T  30334726 aatttcaagttttcattttagtcccacaattaataaaacgtaccttttggtccctca----tccctccgtttgccaaataaat 30334648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 40508405 - 40508489
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||  ||||||||||||| ||||| || |||||||||||||    
T  40508405 aatttcaagttttcatttttgtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgttagccaaataaatcc 40508489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 30310148 - 30310243
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc-gactgttaa 95  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||  || ||||| |||| ||||| ||||||||||||||||| |||||||||    
T  30310148 aatttcaagttttcatttttgtcccacaattaataaaacgtacatttgagttcctcattttttcctccgtttgccaaataaatcccagactgttaa 30310243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 32602960 - 32603043
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||||||||||| |||||||||||| |||||||||||||||| |||| |||||||||||||  |||| |||||||||||||||    
T  32602960 aatttcaagtttttattttggtcccataattaataaaacgtacgttttagtccctcactttttactccgtttgccaaataaatc 32603043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 40509823 - 40509740
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  || |||||||||| ||||| ||| |||||||||||    
T  40509823 aatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgtttaccaaataaatc 40509740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 22115253 - 22115170
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  || |||||||||| ||||| ||  |||||||||||    
T  22115253 aatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgttnaccaaataaatc 22115170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 45454065 - 45454149
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||| ||||||||||||||| || |||||||||||| ||| |||| ||||||||||||| ||||| ||||||||||||||||    
T  45454065 aatttcacgttttcattttggtctcataattaataaaacatacgttttagtccctcactttttcctccgtttgccaaataaatcc 45454149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 22538937 - 22538819
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||| |||||| |||||||||||||||||||||||   || |||| ||||||||  ||| ||||| ||||||||||||||| |||| |||||| |||    
T  22538937 aatttcatgttttctttttggtcccacaattaataaaaatgacgttttagtccctcatcttttcctccgtttgccaaataaatctcgacggttaac-ttt 22538839  T
Q  101 aactctaaatttctatggtg 120  Q
    ||||| |||| |||||||||    
T  22538838 aactccaaatatctatggtg 22538819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 47060564 - 47060470
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    ||||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||  ||   ||| |||||||||||||||| |||||||||    
T  47060564 aattttaagttttcattttggtcctataattaataaaacgtacgttttggtccctcacccttttttccgtttgccaaataaatccggactgttaa 47060470  T

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Target: chr7; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 13564320 - 13564240
Alignment:
Q  9 gttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgac 89  Q
    |||||||||||||||||||||||||||||||   | |||| ||||||||| ||| ||||| ||||||||||||||||||||    
T  13564320 gttttcattttggtcccacaattaataaaactggcgttttagtccctcacattttcctccgtttgccaaataaatcccgac 13564240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 41079923 - 41079806
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    |||||| | |||| |||||||||||||||| |||||||||||| ||||||||||| |  ||| ||||| ||||| ||||||||||| || |||||| |||    
T  41079923 aatttccattttttattttggtcccacaat-aataaaacgtacgttttggtcccttatcttttcctccgtttgctaaataaatccctaccgttaac-ttt 41079826  T
Q  101 aactctaaatttctatggtg 120  Q
    ||||| |||| |||||||||    
T  41079825 aactccaaatatctatggtg 41079806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 40812702 - 40812604
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    ||||||| |||||||||||||| ||| |||||||||||||||| ||||| |||||||  ||| ||||  |||| |||||| |||||||||||| |||||    
T  40812702 aatttcatgttttcattttggttccataattaataaaacgtacgttttgctccctcatattttcctctgtttgtcaaatatatcccgactgtttacttt 40812604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41078783 - 41078881
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    |||||| | |||||||||||||||||||||| |||||| ||| |||||| ||| | |  ||| |||||||||||| ||||||||||||| |||||||||    
T  41078783 aatttccatttttcattttggtcccacaattgataaaaagtatcttttgatcctttagattttcctccatttgccgaataaatcccgacggttaacttt 41078881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 3414923 - 3414839
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||| |||||||||||||||||| |||||||||||    | |||| |||| |||||||| ||||||||||||||||||||||    
T  3414923 aatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccttcactttttcctccatttgccaaataaatcc 3414839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 11344534 - 11344576
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtac 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11344534 aatttcaagttttcattttggtcccacaattaataaaacgtac 11344576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 22336014 - 22336100
Alignment:
Q  9 gttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    ||||||||||||||||||||||||||||||    | |||| ||||||||| ||| ||||  ||||||||||||||||||| ||||||    
T  22336014 gttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctcagtttgccaaataaatcccgaatgttaa 22336100  T

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Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33779173 - 33779106
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctcc 68  Q
    ||||||||||||||||||||| |||||||||||||||||  || |||| ||||||| ||||| |||||    
T  33779173 aatttcaagttttcattttggccccacaattaataaaactcacgttttagtccctcgctttttcctcc 33779106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30311558 - 30311497
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcactttt 62  Q
    |||||||| |||||||||||||||||||||||||||||| ||| |||  |||||||| ||||    
T  30311558 aatttcaaattttcattttggtcccacaattaataaaacatacgtttaagtccctcattttt 30311497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 4298740 - 4298823
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||| ||||||| |||||| ||||||||||||||||| ||   |||  ||||||||||||| ||||  |||||||||||||||    
T  4298740 aattttaagtttttattttgatcccacaattaataaaatgtgggtttaagtccctcactttttcctctgtttgccaaataaatc 4298823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 5095125 - 5095193
Alignment:
Q  15 attttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||||||| |||||||||||||||  || |||| |||| ||||||||||| |  ||||||||||||||    
T  5095125 attttggtctcacaattaataaaactcacgttttagtccttcacttttcccacagtttgccaaataaat 5095193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 22537595 - 22537670
Alignment:
Q  10 ttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||||||||||||||||||| |||||   || ||||| |||||||| |||  |||  ||||||||||||||||    
T  22537595 ttttcattttggtcccacaattactaaaaatgacattttgatccctcacgtttgtctctgtttgccaaataaatcc 22537670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 35664370 - 35664287
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    |||||| | ||||||||||| ||||| || ||||||||  ||||||||||||||| | ||||  |||| ||||||||| |||||    
T  35664370 aatttccatttttcattttgatcccataagtaataaaaaataccttttggtcccttagttttatctccgtttgccaaaaaaatc 35664287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 13562857 - 13562947
Alignment:
Q  9 gttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    ||||| ||||||||||||||| ||||||||    | |||| ||||||||| |||  |||  ||| ||||||||||||||| ||||||||||    
T  13562857 gtttttattttggtcccacaagtaataaaaatggcgttttagtccctcacatttttctctgtttaccaaataaatcccgattgttaacttt 13562947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38539698 - 38539752
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccct 55  Q
    |||||||||||||||||||||||||| || |||||||||  |  |||||||||||    
T  38539698 aatttcaagttttcattttggtcccataaataataaaactcatgttttggtccct 38539752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 3413567 - 3413644
Alignment:
Q  9 gttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    |||||||||||||||| |||||||||||||    | |||| ||||||||| |||  |||  |||||||||||||||||    
T  3413567 gttttcattttggtcctacaattaataaaaatggcgttttagtccctcaccttttactctgtttgccaaataaatccc 3413644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24281101 - 24281138
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaa 38  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  24281101 aatttcatgtttttattttggtcccacaattaataaaa 24281138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25533215 - 25533252
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaa 38  Q
    |||||||||||||||||||||||||| || ||||||||    
T  25533215 aatttcaagttttcattttggtcccataactaataaaa 25533252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 40738928 - 40738843
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaa-cgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||| ||||| |||||||||||| ||||||||||| |   | |||| |||||||||||||  |||  ||||||||||||||||    
T  40738928 aatttcatgtttttattttggtcccataattaataaaaacaggcgttttagtccctcactttttgctctgtttgccaaataaatcc 40738843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 43033109 - 43033193
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  43033109 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatcc 43033193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 17460773 - 17460655
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||| ||||| ||| |||||||||||||||| |||||| |||    
T  17460773 aatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtttcccaaataaatcccgaccgttaac-ttt 17460675  T
Q  101 aactctaaatttctatggtg 120  Q
    |||| ||||| |||||||||    
T  17460674 aactttaaatgtctatggtg 17460655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 28562898 - 28562804
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    |||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||| |||||||||    
T  28562898 aatttcaaattttcattttggtcccataattaataaaacataccttttggtccctcactttttcctccgtttgtcaaataaatccagactgttaa 28562804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 11315960 - 11316078
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||  ||| ||||| |||||||||||||||||| |||||||  |||    
T  11315960 aatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctccgtttgccaaataaatcccggctgttaa-gttt 11316058  T
Q  101 aactctaaatttctatggtg 120  Q
    || || |||| |||||||||    
T  11316059 aattccaaatgtctatggtg 11316078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 43034560 - 43034477
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    |||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  43034560 aatttcaagttttcattttaatctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgtcaaataaatc 43034477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17459280 - 17459362
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||  ||||||||||||| ||||| ||||||||||||||    
T  17459280 aatttcaagttttcattttggtcacacaattaataaaacgtacgtttaagtccctcactttttcctccgtttgccaaataaat 17459362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 7437850 - 7437766
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||| ||||| ||| | ||||||||||    
T  7437850 aatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcaatttttcctccgtttacaaaataaatcc 7437766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 32470664 - 32470546
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||  || |||||  ||| ||||| |||| ||||||||||||| |||||||  |||    
T  32470664 aatttcaagtttttattttggtcccacaattaataaaacgtacgtttaagttcctcatgttttcctccgtttgtcaaataaatcccggctgttaa-gttt 32470566  T
Q  101 aactctaaatttctatggtg 120  Q
    ||||| |||| |||||||||    
T  32470565 aactccaaatgtctatggtg 32470546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 11317457 - 11317373
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||| |||||||||||||||||||||||||||||| ||  ||||||||||||| |||| ||||| |||| |||||||||||    
T  11317457 aatttcaaattttcattttggtcccacaattaataaaacatatattttggtccctcaatttttcctccgtttggcaaataaatcc 11317373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 32469175 - 32469260
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaac--gtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||||||||| |||||||| |||||  |||||||||||||||    
T  32469175 aatttcaagttttcattttgatcccacaattaataaaacgtgtaccttttggtccttcactttttcctcc-gttgccaaataaatcc 32469260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 28561395 - 28561477
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||| ||| | |||| |||||||||    
T  28561395 aattttaagttttcattttggtctcacaattaataaaacgtatcttttggtccctcaccttttcctacgtttgtcaaataaat 28561477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 29219412 - 29219506
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    ||||||| ||||||||||||||||||||||||||||||    | |||| ||||||||| ||| ||||| ||||||||||||||||| ||||||||    
T  29219412 aatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcccaactgttaa 29219506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 29332711 - 29332805
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    ||||||| ||||||||||||||||||||||||||||||    | |||| ||||||||| ||| ||||| ||||||||||||||||| ||||||||    
T  29332711 aatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcccaactgttaa 29332805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 18617095 - 18617001
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    ||||||| ||||||||||||||||||||||||||||||    | |||| ||||||||| ||| ||||| ||||||||||||||||| ||| ||||    
T  18617095 aatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcccaactattaa 18617001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 42641949 - 42641866
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||| |||| |||||||||||| ||||||||||||| ||||||||||||| |||||||   ||| ||||||||||||||||    
T  42641949 aatttcaaatttttattttggtcccataattaataaaacgcaccttttggtcccccactttt-tttccgtttgccaaataaatcc 42641866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6030559 - 6030461
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    ||||| |||||||||||||| ||||||||||||| ||| |||| ||||| ||| |||  ||| |||| |||||||||||||||| | || |||||||||    
T  6030559 aatttgaagttttcattttgatcccacaattaattaaaagtacgttttgatccttcatattttcctctatttgccaaataaatctcaacagttaacttt 6030461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 7436494 - 7436577
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||||||||| |||||||||| |||||||||||||  ||||||||||| ||||| |||| | ||| |||| |||||||||||    
T  7436494 aatttcaagtttttattttggtcctacaattaataaaatataccttttggt-cctcaatttttcttccgtttgtcaaataaatcc 7436577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 18615543 - 18615661
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    |||||||  |||||||||||||| ||||||||||||||    | |||| |||||  || ||| ||||| |||||||||||||||||||||||||| ||||    
T  18615543 aatttcatattttcattttggtctcacaattaataaaaatggctttttagtcccctacattttcctccgtttgccaaataaatcccgactgttaa-tttt 18615641  T
Q  101 aactctaaatttctatggtg 120  Q
    || | ||||| | |||||||    
T  18615642 aattttaaatatttatggtg 18615661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 29220965 - 29220847
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    |||||||  |||||||||||||||||||||||||||||    | |||| |||||| || ||| ||||  |||||||||| ||||||||||||||| ||||    
T  29220965 aatttcatattttcattttggtcccacaattaataaaaatggctttttagtcccttacattttcctctgtttgccaaattaatcccgactgttaa-tttt 29220867  T
Q  101 aactctaaatttctatggtg 120  Q
    || | ||||| | |||||||    
T  29220866 aattttaaatatttatggtg 29220847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 29334264 - 29334146
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    |||||||  |||||||||||||||||||||||||||||    | |||| |||||| || ||| ||||  |||||||||| ||||||||||||||| ||||    
T  29334264 aatttcatattttcattttggtcccacaattaataaaaatggctttttagtcccttacattttcctctgtttgccaaattaatcccgactgttaa-tttt 29334166  T
Q  101 aactctaaatttctatggtg 120  Q
    || | ||||| | |||||||    
T  29334165 aattttaaatatttatggtg 29334146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36010604 - 36010681
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaa 78  Q
    ||||||| |||||||||||||||  || ||||||||||||||  |||| ||||||||||||| ||| | |||||||||    
T  36010604 aatttcatgttttcattttggtcttacgattaataaaacgtatattttagtccctcactttttccttcgtttgccaaa 36010681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 34468985 - 34469068
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||||| ||||||||||||||| ||||||||||||||   || |||| ||||||||| ||| | ||  |||||||||||||||    
T  34468985 aatttcatgttttcattttggtcgcacaattaataaaaatgacgttttagtccctcacattttcttctgtttgccaaataaatc 34469068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 11547686 - 11547780
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    ||||||||||||||||||||||| || ||||||||||||  |  ||||   |||||| |||| ||| | |||| ||||||||||| |||||||||    
T  11547686 aatttcaagttttcattttggtctcataattaataaaacacatgttttaacccctcattttttccttcgtttgtcaaataaatcctgactgttaa 11547780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 6030632 - 6030717
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    ||||||| ||||||||||| ||||||||||||||||||    | |||| || ||| | |||| ||||| |||||||||||||||||    
T  6030632 aatttcatgttttcattttagtcccacaattaataaaattggcgttttagttccttattttttcctccgtttgccaaataaatccc 6030717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 1085475 - 1085394
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||||| |||||||||||||| ||||| |||||||||    | |||||||||||||  ||| ||||| |||||||||||||||    
T  1085475 aatttcatgttttcattttggtaccacatttaataaaattggcgttttggtccctca--ttttcctccgtttgccaaataaatc 1085394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2277558 - 2277502
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctca 57  Q
    |||||| ||||||||||||||||||| || ||||||||| ||  |||||||||||||    
T  2277558 aatttccagttttcattttggtcccataagtaataaaacttatgttttggtccctca 2277502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 2384545 - 2384477
Alignment:
Q  15 attttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||||||| |||||||||||||||  || |||| |||| ||||||||||| |  ||||||||||||||    
T  2384545 attttggtctcacaattaataaaactcacgttttagtccttcacttttcccacagtttgccaaataaat 2384477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 40322992 - 40323060
Alignment:
Q  15 attttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||||||| |||||||||||||||  || |||| |||| ||||||||||| |  ||||||||||||||    
T  40322992 attttggtctcacaattaataaaactcacgttttagtccttcacttttcccacagtttgccaaataaat 40323060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 34512848 - 34512935
Alignment:
Q  8 agttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    ||||||||||||||||||| ||||||||||||  |  ||||| |||||||  ||| ||||| || | ||||||||||  |||||||||    
T  34512848 agttttcattttggtcccataattaataaaactcatgttttgatccctcaaatttgcctccgttagtcaaataaatcatgactgttaa 34512935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 44192535 - 44192453
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||||| |||||||||||| ||||| |||||||||||    | |||| ||||||||| ||| ||||| |||| |||||||||    
T  44192535 aatttcatgttttcattttgatcccaaaattaataaaaatggcattttagtccctcacattttcctccgtttgtcaaataaat 44192453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 21664830 - 21664867
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaa 38  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  21664830 aatttcaagttttcattttggtcacacaattcataaaa 21664867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 35903535 - 35903572
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaa 38  Q
    |||||||||||||||||||||||||| || ||||||||    
T  35903535 aatttcaagttttcattttggtcccataactaataaaa 35903572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 36011721 - 36011648
Alignment:
Q  11 tttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    |||||||||  ||||| ||||||||||| |||| |||| |||||||| ||||   ||| |||||||||||||||    
T  36011721 tttcattttaatcccataattaataaaatgtacgttttagtccctcattttttaatccgtttgccaaataaatc 36011648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 44191163 - 44191200
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaa 38  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  44191163 aatttcatgttttcattttagtcccacaattaataaaa 44191200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 8265572 - 8265640
Alignment:
Q  15 attttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||||||| |||||||||||||||  || ||||  ||| ||||||||||| |  ||||||||||||||    
T  8265572 attttggtctcacaattaataaaactcacgttttaatccttcacttttcccacagtttgccaaataaat 8265640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 12359768 - 12359684
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||| |||||| |||| ||||||||||||||||||    | ||||||||||||| |||| |||   || |||||||||||||    
T  12359768 aatttcatgttttcgttttagtcccacaattaataaaattggcgttttggtccctcattttttcctttgttcgccaaataaatcc 12359684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18197174 - 18197272
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||| ||| |||||||||    
T  18197174 aatttcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgtttgccaaataaatccagaccgttaacttt 18197272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 53194959 - 53194875
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  53194959 aatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctatttgccaaataaatcc 53194875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 34818113 - 34818230
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||   ||||||||||||  ||| ||||||||||||||||||||||| |  |||||| |||    
T  34818113 aatttcaagttttcattttggtcccacaattaataaaacgtatgatttggtccctcagattttcctccatttgccaaataaatcccaatagttaac-ttt 34818211  T
Q  101 aactctaaatttctatggt 119  Q
    |||| ||||| ||||||||    
T  34818212 aactttaaatgtctatggt 34818230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 38240933 - 38241065
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    |||||||| |||| ||||||||||||||||||||||||||||| |||  |||| |||  ||| ||||| |||||||||||||||||| |||||||  |||    
T  38240933 aatttcaaatttttattttggtcccacaattaataaaacgtacgtttaagtccttcagattttcctccgtttgccaaataaatcccggctgttaa-gttt 38241031  T
Q  101 aactctaaatttctatggtgaaccgactgaaaaa 134  Q
    ||||| |||| ||||||||||||| ||| |||||    
T  38241032 aactccaaatgtctatggtgaaccaacttaaaaa 38241065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 38242605 - 38242521
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||  ||||||||||||||||    
T  38242605 aatttcaagttttcattttgatcccacaattaataaaacgtaccttttggtccctcacttttttatctgtttgccaaataaatcc 38242521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12108072 - 12107992
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataa 81  Q
    ||||||||||||||||||||||||||||| ||||||||| ||  |||||||||||||||||| ||||| ||||||||||||    
T  12108072 aatttcaagttttcattttggtcccacaactaataaaacatatattttggtccctcactttttcctccgtttgccaaataa 12107992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 40244214 - 40244294
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataa 81  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||  ||| ||||| ||||||||||||    
T  40244214 aatttcaagttttcattttggtctcacaattaataaaacgtacattttggtccctcaaattttcctccgtttgccaaataa 40244294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 10730920 - 10731034
Alignment:
Q  9 gttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttttaactctaa 108  Q
    |||||||||||||||||| |||||||||||    | ||||||||| ||||||||  |||| ||||||||||||||||||||||||||| |||||||  ||    
T  10730920 gttttcattttggtcccataattaataaaaatggcattttggtccttcacttttttctccgtttgccaaataaatcccgactgttaac-tttaacttcaa 10731018  T
Q  109 atttctatggtgaacc 124  Q
    || |||||||||||||    
T  10731019 atgtctatggtgaacc 10731034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18458746 - 18458663
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||||||||||| ||||||||||||||||||||||||| | | |||| ||||||||||||| ||||| |||||||||||||||    
T  18458746 aatttcaagtttttattttggtcccacaattaataaaacttgcgttttagtccctcactttttcctccgtttgccaaataaatc 18458663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 37736170 - 37736089
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaa 82  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| |||| |||||||||||||  |||| |||||||||||||    
T  37736170 aatttcatgttttcattttggtctcacaattaataaaacgtacgttttagtccctcacttttttctccgtttgccaaataaa 37736089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 53624450 - 53624357
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgtta 94  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||||||| |||||||||  |||  |||||||||||||||| ||| ||||    
T  53624450 aatttcaagttttcattttgatctcacaattaataaaacgtacattttggtcactcacttttttctcggtttgccaaataaatccagacggtta 53624357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 50809448 - 50809563
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc-ccgactgttaacttt 99  Q
    |||||||| ||||||||||||||||| ||||||||||||  || |||| ||||||||||||| ||||| ||||||||||||||| |  ||||| ||| ||    
T  50809448 aatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtttgccaaataaatctcaaactgtcaac-tt 50809546  T
Q  100 taactctaaatttctat 116  Q
    ||||||||||| |||||    
T  50809547 taactctaaatgtctat 50809563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 50810923 - 50810808
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc-ccgactgttaacttt 99  Q
    |||||||| ||||||||||||||||| ||||||||||||  || |||| |||||||| |||| ||||| ||||||||||||||| |  ||||||||| ||    
T  50810923 aatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtttgccaaataaatctcaaactgttaac-tt 50810825  T
Q  100 taactctaaatttctat 116  Q
    ||||||||||| |||||    
T  50810824 taactctaaatgtctat 50810808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 50864941 - 50865056
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc-ccgactgttaacttt 99  Q
    |||||||| ||||||||||||||||| ||||||||||||  || |||| |||||||| |||| ||||| ||||||||||||||| |  ||||||||| ||    
T  50864941 aatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtttgccaaataaatctcaaactgttaac-tt 50865039  T
Q  100 taactctaaatttctat 116  Q
    ||||||||||| |||||    
T  50865040 taactctaaatgtctat 50865056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 50866414 - 50866299
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc-ccgactgttaacttt 99  Q
    |||||||| ||||||||||||||||| ||||||||||||  || |||| ||||||||||||| ||||| ||||||||||||||| |  ||||| ||| ||    
T  50866414 aatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtttgccaaataaatctcaaactgtcaac-tt 50866316  T
Q  100 taactctaaatttctat 116  Q
    ||||||||||| |||||    
T  50866315 taactctaaatgtctat 50866299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 27837947 - 27838044
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactt 98  Q
    ||||||| |||||||||||||||||||||||||||||     | |||| ||||||||| ||| ||||| |||||||||||||||| ||||||||||||    
T  27837947 aatttcatgttttcattttggtcccacaattaataaatatggcgttttagtccctcaccttttcctccgtttgccaaataaatcctgactgttaactt 27838044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 53420343 - 53420428
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    |||||||  ||||||||||||||| |||||||||||||||||| ||||||||||||||||||  |||| |||  ||||||||||||    
T  53420343 aatttcatattttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttttctccgtttatcaaataaatccc 53420428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 53421842 - 53421765
Alignment:
Q  9 gttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||  |||  |||||||||||||||||    
T  53421842 gttttcattttagtcctacaattaataaaacgtacgttttggtccctcacttttttctctgtttgccaaataaatccc 53421765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 41544689 - 41544773
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||||||||||||||||||| | |||||||| ||||||| |||  ||||||||||||| ||||  ||||||||||||||||    
T  41544689 aatttcaagttttcattttggtcctataattaatataacgtacgtttaagtccctcactttttcctctgtttgccaaataaatcc 41544773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 3208511 - 3208595
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||| | ||||||||||||||||| |||||||||||||||| ||||| ||||| | |||| ||||| |||| |||||||||||    
T  3208511 aatttccatttttcattttggtcccataattaataaaacgtacgttttgatcccttattttttcctccgtttgtcaaataaatcc 3208595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 36176596 - 36176512
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctca-cttttccctccatttgccaaataaatc 84  Q
    ||||||| |||||||||||||||||||||||||||||| |||  |||||||||||||  |||| ||||  |||||||||||||||    
T  36176596 aatttcatgttttcattttggtcccacaattaataaaatgtatgttttggtccctcatttttttcctctgtttgccaaataaatc 36176512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 40364346 - 40364430
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||||||||||||||||||| | ||||||||||| |||| |||  |||||||| ||||  |||| ||||||||||||||||    
T  40364346 aatttcaagttttcattttggtcctaaaattaataaaatgtacgtttaagtccctcatttttttctccgtttgccaaataaatcc 40364430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 53187586 - 53187679
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    |||||||||||||||||||| ||  ||||||||||||| |||  ||| |||||||||||||| | ||| ||||||||||||||||| || |||||    
T  53187586 aatttcaagttttcattttgatcttacaattaataaaatgtatgttt-ggtccctcactttttcttccgtttgccaaataaatccctaccgttaa 53187679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 35372247 - 35372150
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactt 98  Q
    ||||||| ||||||||||||||| ||||||||||||||    | |||| ||||||||| ||| ||||  ||||||||||||||||  |||||||||||    
T  35372247 aatttcatgttttcattttggtctcacaattaataaaaatggcgttttagtccctcaccttttcctctgtttgccaaataaatccttactgttaactt 35372150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 18442279 - 18442358
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    |||||||||||||||||||||||||||||||||||||||  || |||| |||| ||| |||| ||||   |||||||||||||    
T  18442279 aatttcaagttttcattttggtcccacaattaataaaacccacgttttagtccatcattttttcctc---ttgccaaataaat 18442358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 19487353 - 19487432
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    |||||||||||||||||||||||||||||||||||||||  || |||| |||| ||| |||| ||||   |||||||||||||    
T  19487353 aatttcaagttttcattttggtcccacaattaataaaacccacgttttagtccatcattttttcctc---ttgccaaataaat 19487432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 53614354 - 53614278
Alignment:
Q  9 gttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||| |||||||||||||||||||||||||   | |||| ||||||||| ||| |||| |||||||||||||||||    
T  53614354 gtttttattttggtcccacaattaataaaactggcgttttagtccctcacattttcctctatttgccaaataaatcc 53614278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 37735333 - 37735416
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||| |||||||||||||||||||| |||||||||||||||  |||| |||||||| ||||  || | |||| ||||||||||    
T  37735333 aattttaagttttcattttggtcccataattaataaaacgtatgttttagtccctcatttttttcttcgtttgtcaaataaatc 37735416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 53612906 - 53613020
Alignment:
Q  9 gttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttttaactctaa 108  Q
    |||||||||||||||||| |||||||||||    | ||||  |||||||| ||| ||||  |||||||||||||||||||| |||||| |||||||  ||    
T  53612906 gttttcattttggtcccataattaataaaaatggcgttttattccctcacattttcctctgtttgccaaataaatcccgaccgttaac-tttaacttcaa 53613004  T
Q  109 atttctatggtgaacc 124  Q
    || |||||| ||||||    
T  53613005 atgtctatgatgaacc 53613020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34819373 - 34819312
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcactttt 62  Q
    |||||||||||||||||||| ||| |||||||||||||||||| |||  |||| ||||||||    
T  34819373 aatttcaagttttcattttgatcctacaattaataaaacgtacgtttaagtccttcactttt 34819312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 23443546 - 23443463
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||| || ||||||||||||||||| ||||||||||||||||||||  |||| |||  ||| | ||  |||||||||||||||    
T  23443546 aattttaacttttcattttggtcccaaaattaataaaacgtacctttaagtccttcatcttttcttctgtttgccaaataaatc 23443463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 36175317 - 36175384
Alignment:
Q  28 aattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    ||||||| |||||||| ||||||| ||||| ||||  |||| |||||||||||||||| |||||||||    
T  36175317 aattaatgaaacgtacgttttggtgcctcatttttttctccgtttgccaaataaatccggactgttaa 36175384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 10732210 - 10732124
Alignment:
Q  9 gttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    |||||||||||||||||| |||||||||||    | |||| ||||||||| ||| ||||| ||| |||||||||| ||||| |||||    
T  10732210 gttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctccgtttaccaaataaattccgacggttaa 10732124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 12106629 - 12106685
Alignment:
Q  29 attaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||||||||||| ||||||||||||||||||  |||| |||  |||||||||||    
T  12106629 attaataaaacgtacattttggtccctcacttttttctccgtttatcaaataaatcc 12106685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 37981730 - 37981662
Alignment:
Q  15 attttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||||||| |||||||||||||||  || |||| |||| ||||||||||| |  ||||||||||||||    
T  37981730 attttggtctcacaattaataaaactcacgttttagtccttcacttttcccacagtttgccaaataaat 37981662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 44175625 - 44175693
Alignment:
Q  15 attttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||||||| |||||||||||||||  || |||| |||| ||||||||||| |  ||||||||||||||    
T  44175625 attttggtctcacaattaataaaactcacgttttagtccttcacttttcccacagtttgccaaataaat 44175693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 24403266 - 24403388
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc-cgactgttaacttt 99  Q
    ||||||||||||||||| ||||| || |||||||||||  ||  |||||||||||||  ||  ||||| |||| ||| |||||||  |  ||||||| ||    
T  24403266 aatttcaagttttcattatggtctcataattaataaaatttatgttttggtccctcaagttcacctccgtttgtcaagtaaatccatgtttgttaac-tt 24403364  T
Q  100 taactctaaatttctatggtgaac 123  Q
    |||| |||||| ||||||||||||    
T  24403365 taaccctaaatgtctatggtgaac 24403388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 41263665 - 41263783
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    |||||||  ||||||||||||||||||| ||| |||||    | ||||||||| |||  |||  |||| |||| ||| |||||||| | ||||||| |||    
T  41263665 aatttcatattttcattttggtcccacatttattaaaaatggcattttggtccgtcatctttttctccgtttgtcaattaaatcccaagtgttaac-ttt 41263763  T
Q  101 aactctaaatttctatggtg 120  Q
    |||||||||| |||||||||    
T  41263764 aactctaaatatctatggtg 41263783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 41264742 - 41264659
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||||| ||||||||||||||| |||| |||||||||    | ||||| |||||||| |||  |||| |||||||||||||||    
T  41264742 aatttcatgttttcattttggtctcacatttaataaaaatggcgttttgatccctcacctttttctccgtttgccaaataaatc 41264659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3210020 - 3209982
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaac 39  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  3210020 aattttaaattttcattttggtcccacaattaataaaac 3209982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 40745555 - 40745457
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    ||||| ||||||||||||||||| ||||||| ||||||| | | ||||| |||||||  ||| |||   ||||| |||||||||  ||| |||||||||    
T  40745555 aattttaagttttcattttggtctcacaattgataaaactttcgttttgatccctcagattttcctttgtttgcaaaataaatcttgaccgttaacttt 40745457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 26887644 - 26887607
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaa 38  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  26887644 aatttcatgttttcatttttgtcccacaattaataaaa 26887607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 35370940 - 35370977
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaa 38  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  35370940 aatttcatgttttcattttgatcccacaattaataaaa 35370977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 38247565 - 38247480
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    |||||| | ||||||||||||||  | || ||||||||||||| ||||||| ||| | ||||| | || ||||||||| |||||||    
T  38247565 aatttccaattttcattttggtcatataagtaataaaacgtacattttggttccttagttttcacaccgtttgccaaaaaaatccc 38247480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 12105317 - 12105353
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaa 37  Q
    |||||||||||||||| |||| |||||||||||||||    
T  12105317 aatttcaagttttcatattggccccacaattaataaa 12105353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 28909687 - 28909611
Alignment:
Q  8 agttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||||||||||||||||| || |||||||||  |  |||||||||||||| |||  |||| || | ||||||||||    
T  28909687 agttttcattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgttggtcaaataaatc 28909611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 42684903 - 42685026
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc-cgactgttaacttt 99  Q
    ||||| |||||||||||||||| ||| ||| ||||||||  || |||| |||||||| ||||  ||   ||| ||||||||||||  |||||||||  ||    
T  42684903 aattttaagttttcattttggttccataatgaataaaactgacgttttagtccctcatttttttctatgtttaccaaataaatccttgactgttaa-gtt 42685001  T
Q  100 taactctaaatttctatggtgaacc 124  Q
    |||| | |||| |||||||||||||    
T  42685002 taaccccaaatgtctatggtgaacc 42685026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 44182323 - 44182391
Alignment:
Q  15 attttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||||||| |||||||||||||||  || |||| |||| |||||||| || |  ||||||||||||||    
T  44182323 attttggtctcacaattaataaaactcacgttttagtccttcactttttccacagtttgccaaataaat 44182391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 125322 - 125238
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  125322 aatttcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatcc 125238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 123996 - 124080
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||  ||||||||||||||||    
T  123996 aatttcaagttttcattttggtcccacaattaataaaacgtacattttggtccctcactttttcctctgtttgccaaataaatcc 124080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 3e-33; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 26696559 - 26696643
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||    
T  26696559 aatttcaagttttcattttggtcccacaattaataaaacatacattttggtccctcactttttcctccatttgccaaataaatcc 26696643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 22551034 - 22551117
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  22551034 aatttcaagtttttattttggtcccacaattaataaaacgtatcttttggtccctcactttt-tctccatttgccaaataaatcc 22551117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 30786703 - 30786823
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaac-ttt 99  Q
    ||||| |||||||||||||| || || |||||||||||||||  ||||| ||||||||||||  |||| |||||||||||||| |||||||||||| |||    
T  30786703 aattttaagttttcattttgatcacataattaataaaacgtatattttgatccctcacttttttctccgtttgccaaataaattccgactgttaactttt 30786802  T
Q  100 taactctaaatttctatggtg 120  Q
    ||||||||||| |||||||||    
T  30786803 taactctaaatgtctatggtg 30786823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 32798621 - 32798537
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||  |||| |||| |||||||||||    
T  32798621 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttagtccctcaattttttctccgtttgtcaaataaatcc 32798537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 44076452 - 44076358
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    |||||||| |||| |||||||||||||||||||||||||||| |||||||| ||||| |||| ||||| ||||||||||||||||| || |||||    
T  44076452 aatttcaaatttttattttggtcccacaattaataaaacgtatcttttggtgcctcaatttttcctccgtttgccaaataaatccctacagttaa 44076358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8570145 - 8570230
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    ||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||  |||  |||||||||||||||||    
T  8570145 aatttcacgttttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttgtctctgtttgccaaataaatccc 8570230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 13116357 - 13116471
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||| ||||||||||||||||||||||||||||||    | |||| |||| |||| ||| ||||| ||||||||||||||||||||||||||| |||    
T  13116357 aatttcatgttttcattttggtcccacaattaataaaagtggcgttttagtccttcacattttcctccgtttgccaaataaatcccgactgttaac-ttt 13116455  T
Q  101 aactctaaatttctat 116  Q
    ||||| |||| |||||    
T  13116456 aactccaaatgtctat 13116471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 41629735 - 41629857
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||||||||| ||||||||| ||||||||||||||||||  ||||| |||||||  ||| | ||| |||||||||||||||||||| |||||| ||     
T  41629735 aatttcaagtttttattttggtctcacaattaataaaacgtatattttgatccctcaagttttcttccgtttgccaaataaatcccgaccgttaac-ttg 41629833  T
Q  101 aactctaaatttctatggtgaacc 124  Q
    ||||| |||  |||||||||||||    
T  41629834 aactccaaaagtctatggtgaacc 41629857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28418833 - 28418942
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc-ccgactgttaacttt 99  Q
    |||||||| ||||||||||||||||| ||||||||||||  || |||| ||||||||||||| ||||| ||||||||||||||| |  ||||||||| ||    
T  28418833 aatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtttgccaaataaatctcaaactgttaac-tt 28418931  T
Q  100 taactctaaat 110  Q
    |||||||||||    
T  28418932 taactctaaat 28418942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 32693857 - 32693955
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    ||||| ||||||||||||||||||||||||||||||||| |||  |||||||| |||  ||| ||||| ||||||||||||||||| || |||||||||    
T  32693857 aattttaagttttcattttggtcccacaattaataaaacatacgctttggtccttcagattttcctccgtttgccaaataaatcccaacagttaacttt 32693955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 42870840 - 42870934
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||| | ||  |||||| ||| ||||| |||||||||    
T  42870840 aatttcaagttttcattttggtcccacaattaataaaacgtacgttttagtcccttactttttcgtctgtttgccgaatgaatcctgactgttaa 42870934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 30787689 - 30787581
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||| |||||||||||||||||||| |||||||||||  ||  |||||||||||||||||| | ||| |||||||||||||||| |  ||||||| |||    
T  30787689 aattttaagttttcattttggtcccataattaataaaatatatattttggtccctcactttttcttccgtttgccaaataaatcctgtatgttaac-ttt 30787591  T
Q  101 aactctaaat 110  Q
    ||||||||||    
T  30787590 aactctaaat 30787581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 4810498 - 4810594
Alignment:
Q  3 tttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    |||||| |||| |||||||||||| |||||||||||||||  ||||||||| |||  |||  |||| |||||||||||||||||||| |||||||||    
T  4810498 tttcaaatttttattttggtcccataattaataaaacgtatgttttggtccttcaaatttttctccgtttgccaaataaatcccgacggttaacttt 4810594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 28420263 - 28420148
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc-ccgactgttaacttt 99  Q
    |||||||| ||||||||||||||||| ||||||||||||  || |||| |||||||| |||| ||||| |||| |||||||||| |  ||||||||| ||    
T  28420263 aatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtttgtcaaataaatctcaaactgttaac-tt 28420165  T
Q  100 taactctaaatttctat 116  Q
    ||||||||||| |||||    
T  28420164 taactctaaatgtctat 28420148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 32797165 - 32797245
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||  ||| ||||| ||| ||||||||    
T  32797165 aatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctccgtttaccaaataa 32797245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 6397810 - 6397893
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    |||||||  |||||||||||||||||||||||||||||| ||| |||| |||||||| ||||  |||| |||||||||||||||    
T  6397810 aatttcatattttcattttggtcccacaattaataaaacttacattttagtccctcatttttttctccgtttgccaaataaatc 6397893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 45279707 - 45279825
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    |||||||| |||||||||| |||  |||||||||||||||||| |||||||||||||  |||   | | |||| ||||||||||||||| |||||| |||    
T  45279707 aatttcaaattttcattttagtcatacaattaataaaacgtacgttttggtccctcaagttttttttcgtttggcaaataaatcccgacggttaac-ttt 45279805  T
Q  101 aactctaaatttctatggtg 120  Q
    |||||||||| | |||||||    
T  45279806 aactctaaatgtatatggtg 45279825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 42100195 - 42100097
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    ||||||| ||||||||||||||| ||||||||||||||    | ||||| |||||||  ||| ||||| |||||||||||| |||||||||||||||||    
T  42100195 aatttcatgttttcattttggtctcacaattaataaaaatggcgttttgatccctcatattttcctccgtttgccaaataattcccgactgttaacttt 42100097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 45281277 - 45281180
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    |||||||||||||||||||||||| |||||||||||||  ||  ||||| ||| |||  ||| ||||||||||||||||||||||| || |||||||||    
T  45281277 aatttcaagttttcattttggtccaacaattaataaaa-atatgttttgatccttcagattttcctccatttgccaaataaatcccaacagttaacttt 45281180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 17339638 - 17339544
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    |||||||  ||||||||||||||| |||||||||||||    | |||| ||||||||| ||| ||||| |||||||||||||||| |||||||||    
T  17339638 aatttcatattttcattttggtccaacaattaataaaaatggcattttagtccctcacgttttcctccgtttgccaaataaatcctgactgttaa 17339544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 32695364 - 32695286
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaat 79  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||  |||| |||| ||| ||||  ||||||||||    
T  32695364 aatttcaagttttcattttggtctcacaattaataaaacgtacgtttaagtccttcacgttttcctctgtttgccaaat 32695286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 42872278 - 42872180
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    ||||| |||||||||||||  || || ||| |||||||||||| |||| |||| |||||||| ||||| |||| ||||||||||| ||| |||||||||    
T  42872278 aattttaagttttcattttaatctcataatgaataaaacgtacgttttagtccttcactttttcctccgtttgtcaaataaatcctgacggttaacttt 42872180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 211622 - 211707
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    ||||||| |||||||||||||||||||||||||||||||  || |||| |||||| | ||||  |||| ||| |||||||||||||    
T  211622 aatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatccc 211707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 240634 - 240549
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    ||||||| |||||||||||||||||||||||||||||||  || |||| |||||| | ||||  |||| ||| |||||||||||||    
T  240634 aatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatccc 240549  T

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Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 725245 - 725330
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    ||||||| |||||||||||||||||||||||||||||||  || |||| |||||| | ||||  |||| ||| |||||||||||||    
T  725245 aatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatccc 725330  T

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Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 793989 - 793904
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    ||||||| |||||||||||||||||||||||||||||||  || |||| |||||| | ||||  |||| ||| |||||||||||||    
T  793989 aatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatccc 793904  T

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Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 8571706 - 8571621
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    |||||||  ||||||||||||||  |||||||||||||||||| ||||||||| ||| ||||  |||| ||| |||||||||||||    
T  8571706 aatttcacattttcattttggtcatacaattaataaaacgtacgttttggtccttcatttttttctccgtttaccaaataaatccc 8571621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13117722 - 13117634
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgac 89  Q
    ||||||| |||||||||||||||||| |||||||||||    | |||| ||||||||| ||| ||||  ||||||||||||||||||||    
T  13117722 aatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctctgtttgccaaataaatcccgac 13117634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 13198030 - 13197963
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctcc 68  Q
    |||||| ||||||| ||||||||||||||||||||||| |||| |||  ||||||||||||| |||||    
T  13198030 aatttcgagttttcgttttggtcccacaattaataaaaggtacgtttaagtccctcactttttcctcc 13197963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 17338068 - 17338151
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||||| ||||||||||||||||||||||||||||||    | |||| ||||||||| |||  |||| |||||||||||||||    
T  17338068 aatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacatttttctccgtttgccaaataaatc 17338151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 26697912 - 26697837
Alignment:
Q  10 ttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||||| |||||| |||||||||||||||| |||| ||||||||||||| | ||| |||| | |||||||||    
T  26697912 ttttcattttagtcccataattaataaaacgtacgttttagtccctcactttttcttccttttgtcgaataaatcc 26697837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 29103527 - 29103598
Alignment:
Q  14 cattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||||||||||||||||||||||||| |||  |||||||| |||| |||||  |||| ||||||||||    
T  29103527 cattttggtcccacaattaataaaacgtacatttgagtccctcattttttcctccgattgctaaataaatcc 29103598  T

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Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 42098590 - 42098683
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    ||||||| ||||||||||||||||||||||||||||||    | ||||| |||| ||| |||  |||| |||||||||||||| |||||||||||    
T  42098590 aatttcatgttttcattttggtcccacaattaataaaagtggcgttttgatcccccacgtttgtctccgtttgccaaataaat-ccgactgttaa 42098683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 42877646 - 42877744
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    ||||||||||||||||||||||| || || |||||||||  |  |||||||||||||| |||  || | |  | ||||||||||||||| |||||||||    
T  42877646 aatttcaagttttcattttggtctcataactaataaaactcatgttttggtccctcacgtttgtcttcgtcagtcaaataaatcccgacggttaacttt 42877744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 6398577 - 6398492
Alignment:
Q  10 ttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    |||||||||||||| || ||||||||||||   | |||| |||||||| |||| ||||| |||| ||||||||||  |||||||||    
T  6398577 ttttcattttggtctcataattaataaaacaagcgttttagtccctcattttttcctccgtttgtcaaataaatcatgactgttaa 6398492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41630213 - 41630152
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcactttt 62  Q
    ||||| || |||||||||| ||| |||||||||||||||||||||||  |||||||| ||||    
T  41630213 aattttaaattttcattttagtctcacaattaataaaacgtacctttaagtccctcaatttt 41630152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 416628 - 416560
Alignment:
Q  15 attttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||||||| |||||||||||||||  || |||| |||| ||||||||||| |  ||||||||||||||    
T  416628 attttggtctcacaattaataaaactcacgttttagtccttcacttttcccacagtttgccaaataaat 416560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 29104450 - 29104371
Alignment:
Q  5 tcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    |||| |||| |||||| |||||||||||||||||||||  |||  |||||||| |||| ||||  |||| ||||||||||    
T  29104450 tcaaatttttattttgatcccacaattaataaaacgtatgtttaagtccctcattttttcctctgtttgtcaaataaatc 29104371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 45437571 - 45437516
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctc 56  Q
    |||||||||||||||||||| ||||| ||||||||||||  |  ||||||||||||    
T  45437571 aatttcaagttttcattttgatcccataattaataaaactcatgttttggtccctc 45437516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17702364 - 17702308
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctca 57  Q
    |||||| | ||||||||||||||||| || ||||||||| ||  |||||||||||||    
T  17702364 aatttccaattttcattttggtcccataactaataaaacctatgttttggtccctca 17702308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 37400839 - 37400907
Alignment:
Q  15 attttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||||||| |||||||||||||||  || |||| |||| |||| |||||| |  ||||||||||||||    
T  37400839 attttggtctcacaattaataaaactcacgttttagtccttcacgtttcccacagtttgccaaataaat 37400907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 41743704 - 41743652
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtcc 53  Q
    ||||| |||||||||||||||||||| || ||||||||| ||  |||||||||    
T  41743704 aattttaagttttcattttggtcccataagtaataaaacttatgttttggtcc 41743652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 52619 - 52737
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    |||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||  |||  |||| |||||||||||||||||||| |||||| |||    
T  52619 aatttcaagttttcattttgatcccacaattaataaaatgtacgttttggtccctcagatttttctccgtttgccaaataaatcccgacagttaac-ttt 52717  T
Q  101 aactctaaatttctatggtg 120  Q
    |||| ||||| | |||||||    
T  52718 aactttaaatgtatatggtg 52737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 54274 - 54180
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    ||||||||||||| ||||||||| ||||||||||||||||| | |||||||||||||  ||| ||||| |||||||||||||||  |||||||||    
T  54274 aatttcaagttttaattttggtcgcacaattaataaaacgtgcgttttggtccctcaaattttcctccgtttgccaaataaatcgtgactgttaa 54180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 109834 - 109736
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||  ||| ||||||||||| |||||| ||| ||||||||    
T  109834 aatttcaagttttcattttggtcctacaattaataaaacgtacattttagtccctcacttttttctcaatttgccaaatgaatcccaactattaacttt 109736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 108540 - 108624
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||| | ||| ||||||| ||||| |||||||||||||||| ||||| ||||||| |||| ||||||||||||||||||||||    
T  108540 aatttccattttacattttgatcccataattaataaaacgtacgttttgatccctcattttttcctccatttgccaaataaatcc 108624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 2556 - 2467
Alignment:
Q  10 ttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttt 99  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| | |||| ||||  ||| |||||||||| |||||||||||||||    
T  2556 ttttcattttggtcccacaattaataaaaagtaccttttggtcccttagtttttcctctgttttccaaataaattccgactgttaacttt 2467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 232203 - 232316
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc-gactgttaacttt 99  Q
    |||||||| ||||||||||||||||| ||||||||||||  || |||| ||||||||||||| ||||| |||||||||||||||||  ||||||||| ||    
T  232203 aatttcaatttttcattttggtcccataattaataaaac--acgttttagtccctcactttttcctccgtttgccaaataaatcccaaactgttaac-tt 232299  T
Q  100 taactctaaatttctat 116  Q
    ||||||||||| |||||    
T  232300 taactctaaatgtctat 232316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6452600 - 6452516
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||  |||||||| |||| ||||| ||||||||||||||||    
T  6452600 aatttcaagttttcattttggtcccataattaataaaacgtacgtttgagtccctcattttttcctccgtttgccaaataaatcc 6452516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 6452311 - 6452395
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    |||||||||||||| ||||||||| | ||||||||||| |||| |||| ||||||||||||| ||||| ||||||||||||||||    
T  6452311 aatttcaagttttcgttttggtcctataattaataaaaggtacgttttagtccctcactttttcctccgtttgccaaataaatcc 6452395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 34024153 - 34024073
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataa 81  Q
    |||||||| ||||||||||||||||||||||||||||| |||| ||||| |||||||||||| ||||| |||| |||||||    
T  34024153 aatttcaaattttcattttggtcccacaattaataaaatgtacattttgatccctcactttttcctccgtttgtcaaataa 34024073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34023913 - 34023980
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctcc 68  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||    
T  34023913 aattttaagttttcattttggtaccacaattaataaaacgtaccttttggtccctcaccttttcctcc 34023980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 7311813 - 7311730
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||| |||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||   || |||||||||||||||||    
T  7311813 aattttaagttttcattttgatcccacaattaataaa-cgtaccttttggtcccttacttttttatctatttgccaaataaatcc 7311730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 17839220 - 17839126
Alignment:
Q  9 gttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttttaact 104  Q
    ||||||||||||||||||||||||||||||    | |||| ||||||||| ||| ||||| |||||||||||||||||||| ||||| ||||||||    
T  17839220 gttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcccgaccgttaa-ttttaact 17839126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 23397435 - 23397325
Alignment:
Q  9 gttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttttaactctaa 108  Q
    ||||||||||||||||||||||||||||||    | |||| ||||||||| ||| ||||| |||||||||||||||||||| |||||  |||||||  ||    
T  23397435 gttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcccgaccgttaa-atttaacttcaa 23397337  T
Q  109 atttctatggtg 120  Q
    || |||||||||    
T  23397336 atgtctatggtg 23397325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 5186595 - 5186716
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||||| ||||||||||||||| ||||||||||||||   || ||||  ||| |||  ||| ||||| |||||||||||||||||||| |||||| |||    
T  5186595 aatttcatgttttcattttggtcacacaattaataaaagtgacgttttaatccatcatcttttcctccgtttgccaaataaatcccgaccgttaac-ttt 5186693  T
Q  101 aactctaaatttctatggtgaac 123  Q
    ||||  |||| ||||||||||||    
T  5186694 aacttcaaatatctatggtgaac 5186716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 7310303 - 7310425
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaactttt 100  Q
    ||||| |||||||||||||||||||| |||||||||||||||  |||  |||| |||  |||  |||| ||| ||||||||||| || |||||||  |||    
T  7310303 aattttaagttttcattttggtcccataattaataaaacgtatgtttaagtccttcaggtttttctccgtttaccaaataaatctcggctgttaa-gttt 7310401  T
Q  101 aactctaaatttctatggtgaacc 124  Q
    ||||| |||| |||||||||||||    
T  7310402 aactccaaatgtctatggtgaacc 7310425  T

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Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 15730119 - 15730036
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaat-aaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    |||||| | ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||| | ||| ||||| ||||||||    
T  15730119 aatttccatttttcattttggtcccacaattaataaaaaaatacattttggtccctcactttttcttccgtttgctaaataaat 15730036  T

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Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 29380226 - 29380320
Alignment:
Q  9 gttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaacttttaact 104  Q
    ||||||||||||||||||||||||| ||||    | |||| ||||||||| ||| | ||| |||||||||||||||||||| ||||| ||||||||    
T  29380226 gttttcattttggtcccacaattaacaaaaatggcgttttagtccctcaccttttcttccgtttgccaaataaatcccgaccgttaa-ttttaact 29380320  T

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Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 6702959 - 6702866
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    |||||||  |||||||||||||||||||||||||||||  |  | |||  |||||||| ||| ||||| |||||||||||||||| |||||||||    
T  6702959 aatttcatattttcattttggtcccacaattaataaaa-atggcgttttatccctcacgttttcctccgtttgccaaataaatcctgactgttaa 6702866  T

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Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2687257 - 2687342
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    ||||||| |||||||||||| |||||||||||||||||    | |||| |||| |||| ||| ||||| |||||||||||||||||    
T  2687257 aatttcatgttttcattttgatcccacaattaataaaaatggcgttttagtccttcacattttcctccgtttgccaaataaatccc 2687342  T

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Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 23392249 - 23392325
Alignment:
Q  9 gttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||||||||||||||||||||||||||    | |||  ||||||||| ||| ||||| ||||||||||||||||    
T  23392249 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc 23392325  T

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Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 6701407 - 6701490
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    |||||||  |||||||||||||||||||||||||||||      |||| ||||||||| ||| ||||| |||||||||||||||    
T  6701407 aatttcatattttcattttggtcccacaattaataaaaatggtattttagtccctcacattttcctccgtttgccaaataaatc 6701490  T

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Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 27080951 - 27081034
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    |||||| ||||||||||||||||  |||||||||||||  ||| |||  |||||||||||||  |||| ||||| |||||||||    
T  27080951 aatttcgagttttcattttggtcttacaattaataaaatttacatttaagtccctcacttttttctccgtttgcgaaataaatc 27081034  T

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Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 18346839 - 18346746
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    |||||||  |||||||||||||||||||||||||||||    | ||||| |||||||| |||  |||  |||||||||||||| |||||||||||    
T  18346839 aatttcatattttcattttggtcccacaattaataaaaatggcgttttgatccctcacgtttgtctctgtttgccaaataaat-ccgactgttaa 18346746  T

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Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 29722690 - 29722784
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    ||||||| |||||||||||| ||||| |||||||||||    | |||| ||||||||| ||| |||||||||  |||||||||| | ||||||||    
T  29722690 aatttcatgttttcattttgatcccataattaataaaaatggcgttttagtccctcacattttcctccattttgcaaataaatctcaactgttaa 29722784  T

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Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27082233 - 27082172
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcactttt 62  Q
    |||||| | ||||||||||||||||||||||||||||| |||  |||  |||||||||||||    
T  27082233 aatttcgaattttcattttggtcccacaattaataaaaagtatgtttaagtccctcactttt 27082172  T

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Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 2688013 - 2687929
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcc 85  Q
    ||||||| ||||||||||| ||||||||||||||||||    | |||| ||||||||| |||   ||| ||||||||||||||||    
T  2688013 aatttcatgttttcattttagtcccacaattaataaaaatggcgttttagtccctcacctttttatccgtttgccaaataaatcc 2687929  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 12669759 - 12669833
Alignment:
Q  10 ttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    |||| ||||||||| |||||||||||||||  |  |||| |||| |||||||| ||||| ||||| |||||||||    
T  12669759 tttttattttggtctcacaattaataaaactcaagttttagtccgtcactttttcctccgtttgctaaataaatc 12669833  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 233653 - 233616
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaa 38  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  233653 aatttcaatttttcattttggtcccataattaataaaa 233616  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5187711 - 5187674
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaa 38  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  5187711 aatttcatgttttcattttggtcccataattaataaaa 5187674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 13847978 - 13847914
Alignment:
Q  15 attttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaat 79  Q
    ||||||||| |||||||||||||||  || |||| |||| ||||||||||| |  ||||||||||    
T  13847978 attttggtctcacaattaataaaactcacgttttagtccttcacttttcccacagtttgccaaat 13847914  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 27967131 - 27967055
Alignment:
Q  8 agttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    ||||||||||||| |||||||||||||| ||| ||| ||||| ||| | | |||| ||| | ||||||||| |||||    
T  27967131 agttttcattttgatcccacaattaatagaacatacattttgatcctttaatttttcctacgtttgccaaaaaaatc 27967055  T

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Target: scaffold0118 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 43664 - 43570
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatcccgactgttaa 95  Q
    ||||| ||||||| |||||||||||| |||||||||||||||  |||  ||||||||||||| ||||| |||||||||||| ||| ||| |||||    
T  43664 aattttaagtttttattttggtcccataattaataaaacgtatgtttaagtccctcactttttcctccgtttgccaaataagtcctgacggttaa 43570  T

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Target: scaffold0078 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 18839 - 18924
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc 86  Q
    ||||| |||||||||||||||||||| | |||||||||| ||  |||| |||||||||||||  |||| |||||||||||||||||    
T  18839 aattttaagttttcattttggtcccatatttaataaaacttatgttttagtccctcactttttactccgtttgccaaataaatccc 18924  T

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Target: scaffold0201 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 21163 - 21237
Alignment:
Q  10 ttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatc 84  Q
    |||||||||| |||||| ||||||||||| |||||||||| ||||| | |||| ||||| |||||||||||||||    
T  21163 ttttcattttagtcccataattaataaaaagtaccttttgatcccttagtttttcctccgtttgccaaataaatc 21237  T

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Target: scaffold0019 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 63212 - 63125
Alignment:
Q  9 gttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc-gactgttaa 95  Q
    |||||||||||||||||||||||||||||     | |||| ||||||||| |||  |||| ||||||||||||||||| |||||||||    
T  63212 gttttcattttggtcccacaattaataaagatggcgttttagtccctcacatttttctccgtttgccaaataaatccctgactgttaa 63125  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 127460 - 127581
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaatccc-gactgttaacttt 99  Q
    |||||||||||||| ||||||||||| || |||||||||  |  |||||||||||||  ||| ||||| |  | |||||||||||| ||| |||||||||    
T  127460 aatttcaagttttcgttttggtcccataactaataaaactcatgttttggtccctcatgtttgcctccgtcggtcaaataaatccctgacagttaacttt 127559  T
Q  100 taactctaaatttctatggtgaa 122  Q
     | ||| |||| |||||||||||    
T  127560 aacctc-aaatgtctatggtgaa 127581  T

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Target: scaffold0035 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 83278 - 83210
Alignment:
Q  15 attttggtcccacaattaataaaacgtaccttttggtccctcacttttccctccatttgccaaataaat 83  Q
    ||||||||| |||||||||||||||  || |||| |||| ||||||||||| |  ||||||||||||||    
T  83278 attttggtctcacaattaataaaactcacgttttagtccttcacttttcccacagtttgccaaataaat 83210  T

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Target: scaffold2071 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 770 - 714
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctca 57  Q
    |||||| ||||||||||||||||||| || |||||||||  |  |||||||||||||    
T  770 aatttccagttttcattttggtcccataactaataaaactcatgttttggtccctca 714  T

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Target: scaffold1251 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 1174 - 1118
Alignment:
Q  1 aatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctca 57  Q
    |||||| ||||||||||||||||||| || |||||||||  |  |||||||||||||    
T  1174 aatttccagttttcattttggtcccataagtaataaaactcatgttttggtccctca 1118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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