View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9356_low_26 (Length: 265)

Name: NF9356_low_26
Description: NF9356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9356_low_26
NF9356_low_26
[»] chr8 (3 HSPs)
chr8 (26-259)||(42202583-42202816)
chr8 (42-234)||(44684390-44684582)
chr8 (99-136)||(3578048-3578085)
[»] chr5 (4 HSPs)
chr5 (55-255)||(3678241-3678440)
chr5 (49-256)||(2756301-2756508)
chr5 (47-232)||(42628996-42629181)
chr5 (42-139)||(3761007-3761104)
[»] chr4 (4 HSPs)
chr4 (55-256)||(55329047-55329248)
chr4 (47-256)||(18847951-18848160)
chr4 (42-234)||(42111001-42111193)
chr4 (48-253)||(55353461-55353666)
[»] chr2 (2 HSPs)
chr2 (78-234)||(38970967-38971123)
chr2 (58-139)||(16080465-16080546)
[»] chr6 (1 HSPs)
chr6 (47-261)||(380662-380877)
[»] chr7 (4 HSPs)
chr7 (47-261)||(6232099-6232314)
chr7 (47-196)||(48888137-48888286)
chr7 (48-168)||(19883466-19883586)
chr7 (47-175)||(44346457-44346585)
[»] chr3 (1 HSPs)
chr3 (47-234)||(51361191-51361378)
[»] scaffold0691 (1 HSPs)
scaffold0691 (42-234)||(1097-1289)
[»] chr1 (1 HSPs)
chr1 (42-139)||(13155021-13155117)


Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 26 - 259
Target Start/End: Complemental strand, 42202816 - 42202583
Alignment:
Q  26 acctgcgagctctagaaccataagtcccagacacctctaaaacttccccatctatctcaataagcattcgatagggttccaacaccactcgtaatagagg 125  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42202816 acctgcgagctctagaaccataagtcccagacacctctaaaactgccccatctatctcaataagcattcgatagggttccaacaccactcgtaatagagg 42202717  T
Q  126 caaggaggactcttaagtctagcattcgcccaattccacgaaatcaccttaatttcctcaactatttcaccataatccctcattaaattattaaaaatcc 225  Q
    |||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  42202716 caaggaggactcttaagtctagaattcacccaattccacaaaatcaccttaatttcctcaactatttcaccataatccttcattaaattattgaaaatcc 42202617  T
Q  226 tatcattccgggccttccaaatcgaccataaaac 259  Q
    ||||||||||||| ||||||||||||||||||||    
T  42202616 tatcattccgggctttccaaatcgaccataaaac 42202583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 234
Target Start/End: Complemental strand, 44684582 - 44684390
Alignment:
Q  42 accataagtcccagacacctctaaaacttccccatctatctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactcttaa 141  Q
    |||| ||||||||||||||||||||||| ||||| || ||  |  ||||||||  | ||||||||||||||||| ||| ||||||| |||||||||||||    
T  44684582 accaaaagtcccagacacctctaaaactaccccacctgtcggagcaagcattccttggggttccaacaccactcataaaagaggcagggaggactcttaa 44684483  T
Q  142 gtctagcattcgcccaattccacgaaatcaccttaatttcctcaactatttcaccataatccctcattaaattattaaaaatcctatcattcc 234  Q
    || | | | ||||||||||||| || | ||||||||| || ||||| ||||| |||| |||  |||  | |  ||||||||||||||||||||    
T  44684482 gttttgtaatcgcccaattccaagagagcaccttaatgtcatcaacaatttccccatgatctttcacaatagaattaaaaatcctatcattcc 44684390  T

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Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 3578048 - 3578085
Alignment:
Q  99 gggttccaacaccactcgtaatagaggcaaggaggact 136  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  3578048 gggttccaacaccactcgtaaaagaggcaaagaggact 3578085  T

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Target: chr5 (Bit Score: 117; Significance: 1e-59; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 55 - 255
Target Start/End: Original strand, 3678241 - 3678440
Alignment:
Q  55 gacacctctaaaacttccccatctatctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactcttaagtctagcattcgc 154  Q
    ||||||||||||||| ||| | |||||| |||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||| | || |    
T  3678241 gacacctctaaaactgccc-acctatcttaataagcattcgatggggttccaacacaacttgtaatagaggcaaggaggactcttaagtctagtaatcac 3678339  T
Q  155 ccaattccacgaaatcaccttaatttcctcaactatttcaccataatccctcattaaattattaaaaatcctatcattccgggccttccaaatcgaccat 254  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||||| ||  |||||| || ||||||||||||||||| ||||||||||||| ||||    
T  3678340 ccaattccacgaaatcaccttaatctcctcaacaatttcaccaaaatccttcgataaatttttgaaaatcctatcattccgcgccttccaaatcgtccat 3678439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 49 - 256
Target Start/End: Original strand, 2756301 - 2756508
Alignment:
Q  49 gtcccagacacctctaaaacttccccatctatctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactcttaagtctagc 148  Q
    ||||| ||| ||||||||||| ||||| |||||||| ||| ||||   | ||||||||||||||||||||||| ||||| ||||| ||||| |||||||     
T  2756301 gtcccggacgcctctaaaactaccccaactatctcagtaaacatttcttggggttccaacaccactcgtaataaaggcacggaggcctctttagtctaga 2756400  T
Q  149 attcgcccaattccacgaaatcaccttaatttcctcaactatttcaccataatccctcattaaattattaaaaatcctatcattccgggccttccaaatc 248  Q
    |  |  |||||||||||||| ||||||||| || ||||| ||||||||||||||  |||  | ||||||||||||||||||||| |  || |||||||||    
T  2756401 aaccatccaattccacgaaagcaccttaatctcatcaacaatttcaccataatctttcacaagattattaaaaatcctatcatttctcgctttccaaatc 2756500  T
Q  249 gaccataa 256  Q
    | ||||||    
T  2756501 gtccataa 2756508  T

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Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 47 - 232
Target Start/End: Original strand, 42628996 - 42629181
Alignment:
Q  47 aagtcccagacacctctaaaacttccccatctatctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactcttaagtcta 146  Q
    ||||||| ||| ||||||||||| ||||| ||||||||  |  |||||  | ||||||| ||||||||| ||||||||||| |||||||| || ||||||    
T  42628996 aagtcccggacgcctctaaaactaccccaactatctcagaagacattccttggggttccgacaccactcataatagaggcagggaggacttttcagtcta 42629095  T
Q  147 gcattcgcccaattccacgaaatcaccttaatttcctcaactatttcaccataatccctcattaaattattaaaaatcctatcatt 232  Q
    | |  ||||||||||||||||| |||| ||||||| ||||| ||||||||| | ||  |||  | |||| ||||||||||||||||    
T  42629096 gtaaccgcccaattccacgaaagcaccataatttcatcaacaatttcaccaaattctttcacaagattactaaaaatcctatcatt 42629181  T

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Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 3761007 - 3761104
Alignment:
Q  42 accataagtcccagacacctctaaaacttccccatctatctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactctt 139  Q
    |||| |||||||| |||||||||||||| ||||| |||| ||| ||| |||||  | |||||| |||| ||||||||||||||||| |||| ||||||    
T  3761007 accaaaagtcccaaacacctctaaaactaccccagctatatcagtaaacattccttggggttcaaacagcactcgtaatagaggcagggagaactctt 3761104  T

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Target: chr4 (Bit Score: 102; Significance: 1e-50; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 55 - 256
Target Start/End: Complemental strand, 55329248 - 55329047
Alignment:
Q  55 gacacctctaaaacttccccatctatctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactcttaagtctagcattcgc 154  Q
    ||||||||||||||| ||||| ||||||||||||||||||  |  ||||||||||||||||||||||||||||||||| |||||||||||| | |||||     
T  55329248 gacacctctaaaactgccccacctatctcaataagcattccttgaggttccaacaccactcgtaatagaggcaaggagaactcttaagtcttgaattcgt 55329149  T
Q  155 ccaattccacgaaatcaccttaatttcctcaactatttcaccataatccctcattaaattattaaaaatcctatcattccgggccttccaaatcgaccat 254  Q
     ||||| ||||||||||||||||||||||| || ||||||||| ||||| |||  |  ||||| ||||||||||||||||  || |||||||||| ||||    
T  55329148 tcaatttcacgaaatcaccttaatttcctccacaatttcaccaaaatccttcaaaaggttattgaaaatcctatcattcctcgctttccaaatcgtccat 55329049  T
Q  255 aa 256  Q
    ||    
T  55329048 aa 55329047  T

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Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 256
Target Start/End: Complemental strand, 18848160 - 18847951
Alignment:
Q  47 aagtcccagacacctctaaaacttccccatctatctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactcttaagtcta 146  Q
    ||||||| ||||||||||||||| ||||| ||||||||||| ||||||  | ||||||||||||||||||||||||||||| |||||||| |||||||||    
T  18848160 aagtcccggacacctctaaaactaccccaactatctcaataggcattccttggggttccaacaccactcgtaatagaggcagggaggacttttaagtcta 18848061  T
Q  147 gcattcgcccaattccacgaaatcaccttaatttcctcaactatttcaccataatccctcattaaattattaaaaatcctatcattccgggccttccaaa 246  Q
    | |  ||||||||||||| ||| ||||||||| || ||||| |||||| ||  |||  |||  | ||||||||||||||||||||| |  || |||||||    
T  18848060 gtaaccgcccaattccaccaaagcaccttaatgtcatcaacaatttcatcacgatctttcacaagattattaaaaatcctatcatttcttgctttccaaa 18847961  T
Q  247 tcgaccataa 256  Q
    ||| ||||||    
T  18847960 tcgtccataa 18847951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 234
Target Start/End: Original strand, 42111001 - 42111193
Alignment:
Q  42 accataagtcccagacacctctaaaacttccccatctatctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactcttaa 141  Q
    |||| ||||||| ||||||||||||||| ||||| || ||  |  ||||||||  | |||||||||||||||||  || |||||||  ||||||||||||    
T  42111001 accaaaagtcccggacacctctaaaactaccccacctgtcggagcaagcattccttggggttccaacaccactcaaaaaagaggcagtgaggactcttaa 42111100  T
Q  142 gtctagcattcgcccaattccacgaaatcaccttaatttcctcaactatttcaccataatccctcattaaattattaaaaatcctatcattcc 234  Q
    |||| | | ||||||||||||| || | ||||||||| || ||||| ||||| ||||||||  |||  | |  ||||||||||||||||||||    
T  42111101 gtcttgtaatcgcccaattccaagagagcaccttaatgtcatcaacaatttccccataatctttcacaatagaattaaaaatcctatcattcc 42111193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 253
Target Start/End: Complemental strand, 55353666 - 55353461
Alignment:
Q  48 agtcccagacacctctaaaacttccccatctatctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactcttaagtctag 147  Q
    |||||| | ||||||| ||||| ||||| ||||| ||| | |||||   | |||||||| ||||| |||||| |||||||||||||||| |||||||| |    
T  55353666 agtccctgccacctctgaaactaccccacctatcgcaaaaggcatttcttggggttccagcaccaatcgtaaaagaggcaaggaggacttttaagtctgg 55353567  T
Q  148 cattcgcccaattccacgaaatcaccttaatttcctcaactatttcaccataatccctcattaaattattaaaaatcctatcattccgggccttccaaat 247  Q
     |||||||||||||||||| |||||||| || || ||||| || ||| ||  |||| | |  | |  ||| ||||||||||||||||  || ||||||||    
T  55353566 aattcgcccaattccacgagatcaccttgatgtcatcaacgatatcagcaacatccttgacaagagaattgaaaatcctatcattcctcgctttccaaat 55353467  T
Q  248 cgacca 253  Q
    ||||||    
T  55353466 cgacca 55353461  T

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Target: chr2 (Bit Score: 97; Significance: 9e-48; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 78 - 234
Target Start/End: Complemental strand, 38971123 - 38970967
Alignment:
Q  78 tatctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactcttaagtctagcattcgcccaattccacgaaatcaccttaa 177  Q
    |||||||||||||||||  | |||||||||||||||||||||||||||||| ||||||| |||||||||| ||| |||||||||||||||||||||||||    
T  38971123 tatctcaataagcattctttggggttccaacaccactcgtaatagaggcaatgaggacttttaagtctagaatttgcccaattccacgaaatcaccttaa 38971024  T
Q  178 tttcctcaactatttcaccataatccctcattaaattattaaaaatcctatcattcc 234  Q
    ||||||| || ||||||||| ||||| |||||  ||| || ||||||||||||||||    
T  38971023 tttcctccacaatttcaccaaaatccttcatttgatttttgaaaatcctatcattcc 38970967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 16080546 - 16080465
Alignment:
Q  58 acctctaaaacttccccatctatctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactctt 139  Q
    |||||||||||| |||||  | |||||  || |||||  | ||||||||||||||||| ||| |||||||||||||||||||    
T  16080546 acctctaaaactaccccaattttctcatcaaacattccttggggttccaacaccactcataaaagaggcaaggaggactctt 16080465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 47 - 261
Target Start/End: Original strand, 380662 - 380877
Alignment:
Q  47 aagtcccagacacctctaaaacttccccatct-atctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactcttaagtct 145  Q
    ||||||| ||||||||||||||| |||||  | ||||||||||||||||  | |||||||| |||||||||||||||||||| ||||||||| |||||||    
T  380662 aagtcccggacacctctaaaactgccccacgttatctcaataagcattccttggggttccagcaccactcgtaatagaggcatggaggactcctaagtct 380761  T
Q  146 agcattcgcccaattccacgaaatcaccttaatttcctcaactatttcaccataatccctcattaaattattaaaaatcctatcattccgggccttccaa 245  Q
    || ||| |||||||||||||||||||||||||| ||||| || | ||||||| ||||| |    ||||| ||||| ||||||||||| |   | ||||||    
T  380762 agaattagcccaattccacgaaatcaccttaatatcctccaccaattcaccaaaatccttggaaaaattgttaaagatcctatcatttctcactttccaa 380861  T
Q  246 atcgaccataaaactg 261  Q
    ||||||||||| ||||    
T  380862 atcgaccataacactg 380877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 5e-40; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 47 - 261
Target Start/End: Complemental strand, 6232314 - 6232099
Alignment:
Q  47 aagtcccagacacctctaaaacttccccatct-atctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactcttaagtct 145  Q
    ||||||| ||||||||||||||| |||||  | ||||||||||||||||  | |||||||| |||||||||||||||||||| ||||||||| |||||||    
T  6232314 aagtcccggacacctctaaaactgccccacattatctcaataagcattccttggggttccagcaccactcgtaatagaggcatggaggactcctaagtct 6232215  T
Q  146 agcattcgcccaattccacgaaatcaccttaatttcctcaactatttcaccataatccctcattaaattattaaaaatcctatcattccgggccttccaa 245  Q
    || ||| |||||||||||||||||||||||||| ||||| || | ||||||| ||||| |    | ||| ||||| ||| ||||||| |  || ||||||    
T  6232214 agaattagcccaattccacgaaatcaccttaatatcctccaccaattcaccaaaatccttggaaatattgttaaagatcatatcatttctcgctttccaa 6232115  T
Q  246 atcgaccataaaactg 261  Q
    ||||||||||| ||||    
T  6232114 atcgaccataacactg 6232099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 47 - 196
Target Start/End: Complemental strand, 48888286 - 48888137
Alignment:
Q  47 aagtcccagacacctctaaaacttccccatctatctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactcttaagtcta 146  Q
    ||||||| |||||||||| |||| ||||| | ||||||| |  |||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  48888286 aagtcccggacacctctagaactaccccaccaatctcaaaagacattccttggggttccaacaccactcgtaatagaggcaaggaggactctttagtcta 48888187  T
Q  147 gcattcgcccaattccacgaaatcaccttaatttcctcaactatttcacc 196  Q
    | |||| ||||||||||||| | ||||||||| || ||||| ||||||||    
T  48888186 gaattcacccaattccacgagagcaccttaatatcatcaaccatttcacc 48888137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 168
Target Start/End: Original strand, 19883466 - 19883586
Alignment:
Q  48 agtcccagacacctctaaaacttccccatctatctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactcttaagtctag 147  Q
    |||||| ||||||||||||||| ||||| |||||||||||| |||||  | ||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  19883466 agtcccggacacctctaaaactaccccaactatctcaataaacattccttggggttccaacaccactcgtaatagaggcacggaggactctttagtctag 19883565  T
Q  148 cattcgcccaattccacgaaa 168  Q
        |||||||||||||||||    
T  19883566 acaccgcccaattccacgaaa 19883586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 44346585 - 44346457
Alignment:
Q  47 aagtcccagacacctctaaaacttccccatctatctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactcttaagtcta 146  Q
    |||||||  |||||||| ||||||||||| ||| | ||| | ||||||  | |||||||| ||||||| |||| |||||||||||||||| |||||||||    
T  44346585 aagtccctaacacctctgaaacttccccacctaacgcaaaaggcattctttggggttccagcaccacttgtaaaagaggcaaggaggacttttaagtcta 44346486  T
Q  147 gcattcgcccaattccacgaaatcacctt 175  Q
    | |||||||||||| ||||||| ||||||    
T  44346485 gaattcgcccaattacacgaaagcacctt 44346457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 47 - 234
Target Start/End: Complemental strand, 51361378 - 51361191
Alignment:
Q  47 aagtcccagacacctctaaaacttccccatctatctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactcttaagtcta 146  Q
    ||||||| ||||||||||||||| ||||| ||||||||||| ||||||  | ||||||||||||||||| ||||||||||| |||| ||| || ||||||    
T  51361378 aagtccctgacacctctaaaactaccccaactatctcaataggcattccttggggttccaacaccactcataatagaggcagggagaacttttgagtcta 51361279  T
Q  147 gcattcgcccaattccacgaaatcaccttaatttcctcaactatttcaccataatccctcattaaattattaaaaatcctatcattcc 234  Q
    | |  || |||||||||| ||| ||||||||| || | ||| |||||||| | |||  | |  |  ||||||||||||||||||||||    
T  51361278 gtaaccgtccaattccacaaaagcaccttaatgtcataaacaatttcaccgtgatctttaacaatcttattaaaaatcctatcattcc 51361191  T

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Target: scaffold0691 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0691
Description:

Target: scaffold0691; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 234
Target Start/End: Complemental strand, 1289 - 1097
Alignment:
Q  42 accataagtcccagacacctctaaaacttccccatctatctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactcttaa 141  Q
    |||| ||||||| ||||||||||||||| ||||| || ||  |  ||||||||  | || |||||||||||||| ||| ||||||| |||||||||||||    
T  1289 accaaaagtcccggacacctctaaaactaccccacctgtcggagcaagcattccttgggcttccaacaccactcataaaagaggcagggaggactcttaa 1190  T
Q  142 gtctagcattcgcccaattccacgaaatcaccttaatttcctcaactatttcaccataatccctcattaaattattaaaaatcctatcattcc 234  Q
    |||| | | ||||||||||||| |  | ||||||||| || ||||| ||||| ||||||||  |||  | |  ||||||||||||||||||||    
T  1189 gtcttgtaatcgcccaattccaagggagcaccttaatgtcatcaacaatttccccataatctttcacaatagaattaaaaatcctatcattcc 1097  T

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Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 13155117 - 13155021
Alignment:
Q  42 accataagtcccagacacctctaaaacttccccatctatctcaataagcattcgatagggttccaacaccactcgtaatagaggcaaggaggactctt 139  Q
    |||| |||||||| ||||||||||| || ||| | || ||||| ||| |||||  |||||||| |||||||||||||||||||||||| |||||||||    
T  13155117 accaaaagtcccaaacacctctaaa-ctacccgagctttctcagtaaacattctttagggttcaaacaccactcgtaatagaggcaagtaggactctt 13155021  T

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