View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9357_low_63 (Length: 287)
Name: NF9357_low_63
Description: NF9357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9357_low_63 |
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Alignment Details
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 20 - 277
Target Start/End: Original strand, 27139692 - 27139949
Alignment:
| Q |
20 |
gttgagggccctccttaatatttaggcatctcnnnnnnngatccacaataccctccctaagaattttctaaatttcaagttgaatagtgataactcatga |
119 |
Q |
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| T |
27139692 |
gttgagggccctccttaatatttaggcatctctttttttgatccacaataccctccctaagaattttctaaattgcaagttgaatagtgataactcatga |
27139791 |
T |
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| Q |
120 |
aacaaaccatgtgagtgggggatacctatctttaaatccaaaaagagagtttgcttgtgctatagtccaaaagtcaaagcatcaaatctaaaagatcnnn |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27139792 |
aacaaaccatgtgagtgggggatacctatctttaaatccaaaaagagagtttgcttgtgctatagtccaaaagtcaaagcatcaaatctaaaagatcaaa |
27139891 |
T |
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| Q |
220 |
nnnngttacatacttttataaaagaaaacaatgttcaaattatgcattgcagcctttg |
277 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27139892 |
aaaagttacatacttttataaaagaaaacaatgttcaaattatgcattgcagcctttg |
27139949 |
T |
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