View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9357_low_84 (Length: 243)

Name: NF9357_low_84
Description: NF9357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9357_low_84
NF9357_low_84
[»] chr5 (33 HSPs)
chr5 (140-226)||(33037607-33037693)
chr5 (140-226)||(1671629-1671715)
chr5 (140-226)||(2972411-2972497)
chr5 (140-226)||(26791142-26791228)
chr5 (140-214)||(13168609-13168683)
chr5 (140-226)||(18258691-18258777)
chr5 (140-226)||(7287087-7287173)
chr5 (140-226)||(28306030-28306116)
chr5 (140-226)||(36739035-36739121)
chr5 (140-226)||(1274445-1274530)
chr5 (140-226)||(1764311-1764397)
chr5 (140-226)||(5168270-5168356)
chr5 (140-226)||(7076466-7076552)
chr5 (140-226)||(14923160-14923246)
chr5 (140-226)||(41321342-41321428)
chr5 (140-226)||(8686978-8687064)
chr5 (140-221)||(14051218-14051299)
chr5 (140-223)||(28467354-28467437)
chr5 (140-226)||(39591767-39591853)
chr5 (140-226)||(39592159-39592245)
chr5 (140-197)||(35646470-35646527)
chr5 (140-226)||(42175008-42175092)
chr5 (140-226)||(15479556-15479642)
chr5 (140-226)||(39054674-39054760)
chr5 (170-226)||(35634733-35634789)
chr5 (147-226)||(7552865-7552944)
chr5 (151-226)||(17626084-17626159)
chr5 (140-177)||(19521950-19521987)
chr5 (140-208)||(33958175-33958243)
chr5 (140-214)||(18660846-18660919)
chr5 (140-197)||(1079879-1079936)
chr5 (145-226)||(13309975-13310056)
chr5 (142-226)||(27546155-27546239)
[»] chr4 (46 HSPs)
chr4 (140-226)||(39440571-39440657)
chr4 (140-226)||(26492094-26492180)
chr4 (140-226)||(38376388-38376474)
chr4 (144-226)||(43175075-43175157)
chr4 (140-226)||(11068775-11068861)
chr4 (140-226)||(23369230-23369316)
chr4 (140-226)||(24575749-24575835)
chr4 (140-226)||(44539821-44539907)
chr4 (140-226)||(51986129-51986215)
chr4 (140-226)||(53801657-53801743)
chr4 (140-226)||(27965074-27965158)
chr4 (140-226)||(26732312-26732398)
chr4 (140-226)||(37297136-37297221)
chr4 (140-226)||(37997341-37997427)
chr4 (142-226)||(29175314-29175398)
chr4 (140-226)||(10250413-10250499)
chr4 (140-226)||(26724870-26724956)
chr4 (140-226)||(27050984-27051070)
chr4 (141-226)||(31641463-31641548)
chr4 (140-221)||(39478524-39478605)
chr4 (140-208)||(40348881-40348949)
chr4 (140-226)||(5622545-5622631)
chr4 (140-226)||(15175633-15175719)
chr4 (140-226)||(36177993-36178079)
chr4 (140-226)||(38134440-38134526)
chr4 (142-226)||(46213059-46213143)
chr4 (151-226)||(34616659-34616734)
chr4 (140-226)||(2575688-2575774)
chr4 (140-197)||(2268434-2268491)
chr4 (140-197)||(29531533-29531590)
chr4 (140-197)||(46634187-46634244)
chr4 (140-197)||(50608551-50608608)
chr4 (140-226)||(39195144-39195230)
chr4 (140-226)||(42853664-42853750)
chr4 (151-226)||(38382419-38382494)
chr4 (167-226)||(45083086-45083145)
chr4 (151-226)||(47181939-47182014)
chr4 (151-226)||(48402095-48402170)
chr4 (140-226)||(11672021-11672107)
chr4 (146-207)||(19473873-19473934)
chr4 (174-226)||(5233568-5233620)
chr4 (167-226)||(39606086-39606145)
chr4 (140-207)||(50831672-50831739)
chr4 (140-182)||(39654911-39654953)
chr4 (140-186)||(51255834-51255880)
chr4 (152-226)||(56363943-56364017)
[»] chr3 (49 HSPs)
chr3 (140-226)||(32924179-32924265)
chr3 (140-226)||(42358536-42358622)
chr3 (140-226)||(5114165-5114251)
chr3 (140-226)||(27541400-27541486)
chr3 (140-226)||(37503645-37503731)
chr3 (140-226)||(38926715-38926801)
chr3 (140-226)||(41309204-41309290)
chr3 (140-226)||(42356982-42357068)
chr3 (151-226)||(47472427-47472502)
chr3 (140-226)||(288813-288899)
chr3 (140-226)||(5244316-5244402)
chr3 (140-226)||(19149077-19149163)
chr3 (140-226)||(24256669-24256755)
chr3 (140-226)||(44413293-44413379)
chr3 (140-226)||(44813223-44813309)
chr3 (140-226)||(44856040-44856126)
chr3 (140-226)||(52254036-52254122)
chr3 (140-226)||(52939738-52939824)
chr3 (140-213)||(20547901-20547974)
chr3 (140-226)||(16969464-16969550)
chr3 (140-226)||(33939325-33939411)
chr3 (140-226)||(36670912-36670998)
chr3 (140-226)||(46623994-46624080)
chr3 (143-226)||(55151615-55151698)
chr3 (140-226)||(7934062-7934147)
chr3 (140-226)||(31157575-31157661)
chr3 (140-214)||(35597249-35597323)
chr3 (140-226)||(37302633-37302719)
chr3 (159-226)||(13735836-13735903)
chr3 (140-226)||(26014899-26014985)
chr3 (140-197)||(41505578-41505635)
chr3 (140-197)||(44413849-44413906)
chr3 (166-226)||(52326132-52326192)
chr3 (140-226)||(7668086-7668171)
chr3 (140-226)||(13348032-13348118)
chr3 (140-226)||(35376979-35377065)
chr3 (150-226)||(44383286-44383362)
chr3 (140-226)||(8847197-8847282)
chr3 (148-226)||(44445389-44445467)
chr3 (152-197)||(50318316-50318361)
chr3 (151-226)||(21217610-21217685)
chr3 (151-226)||(23592556-23592631)
chr3 (151-226)||(37056955-37057030)
chr3 (140-226)||(35201332-35201418)
chr3 (145-226)||(44463449-44463530)
chr3 (146-194)||(14226635-14226683)
chr3 (140-188)||(45000150-45000198)
chr3 (142-226)||(42889074-42889158)
chr3 (140-208)||(45711355-45711423)
[»] chr2 (37 HSPs)
chr2 (140-226)||(18254107-18254193)
chr2 (140-226)||(22888715-22888801)
chr2 (140-226)||(37737869-37737955)
chr2 (142-226)||(6049243-6049327)
chr2 (140-226)||(1248773-1248859)
chr2 (140-226)||(2076656-2076742)
chr2 (140-226)||(3838778-3838864)
chr2 (140-226)||(9207677-9207763)
chr2 (140-226)||(41195671-41195757)
chr2 (140-226)||(43487466-43487552)
chr2 (142-226)||(19633371-19633456)
chr2 (142-226)||(19830272-19830357)
chr2 (140-226)||(42091400-42091488)
chr2 (140-222)||(7698258-7698340)
chr2 (140-226)||(9647219-9647305)
chr2 (152-226)||(9760117-9760191)
chr2 (140-226)||(9990778-9990864)
chr2 (140-226)||(32477419-32477505)
chr2 (140-214)||(34945000-34945074)
chr2 (140-226)||(41042341-41042427)
chr2 (140-226)||(42421796-42421882)
chr2 (140-197)||(6511338-6511395)
chr2 (140-226)||(21611553-21611644)
chr2 (140-207)||(27490647-27490714)
chr2 (140-224)||(19108993-19109077)
chr2 (140-226)||(9194328-9194414)
chr2 (151-197)||(17388530-17388576)
chr2 (151-226)||(41056645-41056720)
chr2 (140-226)||(8848595-8848681)
chr2 (140-197)||(22416300-22416357)
chr2 (151-226)||(3097759-3097834)
chr2 (151-226)||(13333068-13333143)
chr2 (151-226)||(25270480-25270555)
chr2 (140-207)||(39147853-39147920)
chr2 (169-207)||(29349622-29349660)
chr2 (140-181)||(22445967-22446008)
chr2 (140-197)||(44287369-44287426)
[»] chr1 (50 HSPs)
chr1 (140-226)||(35369787-35369873)
chr1 (140-226)||(45333798-45333884)
chr1 (140-226)||(649856-649942)
chr1 (140-226)||(26469446-26469532)
chr1 (140-226)||(27464955-27465041)
chr1 (140-226)||(50932391-50932477)
chr1 (140-226)||(33100895-33100981)
chr1 (140-226)||(37274931-37275017)
chr1 (140-226)||(45121379-45121464)
chr1 (140-226)||(48470726-48470812)
chr1 (140-226)||(19055657-19055743)
chr1 (140-226)||(31088268-31088354)
chr1 (140-226)||(45640389-45640474)
chr1 (140-226)||(44914469-44914556)
chr1 (140-226)||(3851245-3851331)
chr1 (140-226)||(3981924-3982010)
chr1 (140-226)||(8350097-8350182)
chr1 (140-226)||(23645498-23645584)
chr1 (140-226)||(37619631-37619717)
chr1 (140-226)||(37685416-37685502)
chr1 (140-226)||(37700016-37700102)
chr1 (140-226)||(44519049-44519135)
chr1 (145-226)||(40861160-40861241)
chr1 (140-226)||(50726146-50726232)
chr1 (146-226)||(21401491-21401571)
chr1 (1-49)||(41983024-41983072)
chr1 (151-214)||(43775304-43775367)
chr1 (140-214)||(52576212-52576286)
chr1 (140-206)||(4776843-4776909)
chr1 (140-226)||(30467431-30467517)
chr1 (150-226)||(2571732-2571809)
chr1 (146-210)||(51718540-51718604)
chr1 (151-226)||(46907293-46907368)
chr1 (140-198)||(3159463-3159521)
chr1 (140-197)||(12657309-12657367)
chr1 (140-214)||(15082961-15083034)
chr1 (140-226)||(18434882-18434968)
chr1 (140-226)||(26020974-26021060)
chr1 (140-226)||(31827038-31827124)
chr1 (140-226)||(50149033-50149119)
chr1 (140-197)||(6693244-6693301)
chr1 (140-187)||(37985323-37985370)
chr1 (140-226)||(10627708-10627794)
chr1 (140-226)||(15469955-15470040)
chr1 (140-194)||(27533414-27533468)
chr1 (140-206)||(48261227-48261293)
chr1 (140-186)||(48858911-48858957)
chr1 (145-191)||(51436612-51436658)
chr1 (161-226)||(30735191-30735256)
chr1 (169-221)||(48103266-48103318)
[»] chr8 (25 HSPs)
chr8 (140-226)||(4054184-4054270)
chr8 (140-226)||(12898827-12898913)
chr8 (140-223)||(7271937-7272020)
chr8 (140-226)||(27325845-27325931)
chr8 (140-226)||(32501094-32501180)
chr8 (140-226)||(34186694-34186780)
chr8 (151-226)||(5277397-5277472)
chr8 (152-226)||(36251425-36251499)
chr8 (140-226)||(36816514-36816600)
chr8 (140-226)||(11253440-11253526)
chr8 (140-226)||(37449323-37449409)
chr8 (140-226)||(42768291-42768377)
chr8 (140-224)||(43397868-43397952)
chr8 (140-207)||(37133779-37133846)
chr8 (140-226)||(22719527-22719613)
chr8 (140-197)||(10731633-10731690)
chr8 (140-226)||(29025347-29025433)
chr8 (140-226)||(36660348-36660434)
chr8 (173-226)||(10692551-10692604)
chr8 (153-214)||(24479323-24479384)
chr8 (140-197)||(31249451-31249508)
chr8 (167-225)||(34084998-34085056)
chr8 (140-186)||(5600924-5600970)
chr8 (140-186)||(5639650-5639696)
chr8 (142-186)||(44061807-44061851)
[»] chr7 (28 HSPs)
chr7 (140-226)||(38956516-38956602)
chr7 (140-226)||(24614214-24614300)
chr7 (140-226)||(40112852-40112938)
chr7 (140-222)||(43025427-43025509)
chr7 (140-226)||(44895470-44895556)
chr7 (140-226)||(22918067-22918153)
chr7 (140-226)||(32529754-32529840)
chr7 (140-215)||(41189452-41189527)
chr7 (140-226)||(3937021-3937107)
chr7 (140-211)||(44189223-44189294)
chr7 (140-210)||(25192831-25192901)
chr7 (140-226)||(41989638-41989726)
chr7 (140-223)||(35072263-35072346)
chr7 (140-226)||(40417861-40417947)
chr7 (140-226)||(46578033-46578119)
chr7 (140-193)||(31445405-31445458)
chr7 (140-197)||(38073307-38073364)
chr7 (140-226)||(45851105-45851188)
chr7 (140-224)||(47391225-47391309)
chr7 (151-226)||(46022165-46022240)
chr7 (140-226)||(35098601-35098687)
chr7 (140-218)||(41863535-41863613)
chr7 (140-197)||(38861183-38861240)
chr7 (166-226)||(43942745-43942805)
chr7 (151-226)||(7701642-7701717)
chr7 (140-186)||(12007123-12007169)
chr7 (140-194)||(48062144-48062198)
chr7 (140-193)||(22925215-22925268)
[»] chr6 (24 HSPs)
chr6 (140-226)||(552880-552966)
chr6 (140-226)||(32316826-32316912)
chr6 (140-226)||(15974695-15974781)
chr6 (144-214)||(33430272-33430342)
chr6 (140-226)||(1156807-1156893)
chr6 (140-226)||(14818019-14818105)
chr6 (140-226)||(34047474-34047560)
chr6 (140-226)||(13689892-13689978)
chr6 (140-226)||(18737465-18737551)
chr6 (140-210)||(31077881-31077951)
chr6 (140-207)||(277078-277145)
chr6 (140-211)||(5694064-5694135)
chr6 (140-226)||(4820454-4820540)
chr6 (140-226)||(26595436-26595522)
chr6 (140-225)||(3853206-3853291)
chr6 (157-207)||(5570255-5570305)
chr6 (140-226)||(11612275-11612361)
chr6 (140-226)||(22079461-22079547)
chr6 (140-197)||(5080494-5080551)
chr6 (140-197)||(8098524-8098581)
chr6 (140-189)||(33603215-33603264)
chr6 (140-224)||(11014890-11014974)
chr6 (151-226)||(16199548-16199623)
chr6 (140-226)||(30423450-30423536)
[»] scaffold0056 (1 HSPs)
scaffold0056 (140-226)||(76517-76603)
[»] scaffold0199 (1 HSPs)
scaffold0199 (142-226)||(8757-8841)
[»] scaffold0098 (1 HSPs)
scaffold0098 (146-226)||(49388-49468)
[»] scaffold0519 (1 HSPs)
scaffold0519 (140-226)||(11869-11955)
[»] scaffold0067 (1 HSPs)
scaffold0067 (140-197)||(35610-35667)
[»] scaffold0041 (1 HSPs)
scaffold0041 (146-197)||(10890-10941)


Alignment Details
Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 33037607 - 33037693
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  33037607 tattgctttgatttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 33037693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 1671629 - 1671715
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  1671629 tattgttttggtttttgtgtcagtacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaat 1671715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 2972411 - 2972497
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||||||||||| || ||||||||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  2972411 tattgctttgatttttgtgtcaatacctcatttccttcgtgaaattttgattgtcacaaaagttgtcacatatataaatgttcaaat 2972497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 26791228 - 26791142
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  26791228 tattgctttggtttttgtgccactaactcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 26791142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 13168609 - 13168683
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatat 214  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13168609 tattactttggtttttgtgccactatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatat 13168683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 18258777 - 18258691
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||| ||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  18258777 tatttctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 18258691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 7287173 - 7287087
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| |||||||||||||| ||||||| ||||||||||||||| |||||||| ||||||||||||||||  ||||||||||    
T  7287173 tattgttttggtttttgtgtcactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaat 7287087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 28306116 - 28306030
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| | |||||| ||||| ||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  28306116 tattgctttggtctttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 28306030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 36739035 - 36739121
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||| |||||||| || || |||||||||| |||||||||||    
T  36739035 tattgctttggtttttgtgtcactacctcatttcttttgtaaaattttggttgtcacaaaaattatcacatatatggatgttcaaat 36739121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 1274445 - 1274530
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||||||| ||| || | |||||||||||||||| |||||||||||    
T  1274445 tattgctttggtttttgtgtcaatatctcattccctttgtaaaattttggttg-cataaaagttgtcacatatatggatgttcaaat 1274530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 1764311 - 1764397
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||| || ||||| |||||||||||| |||||||||| |||||||| ||||||||||||||||  ||||||||||    
T  1764311 tattgctttggtttttatgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaat 1764397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 5168270 - 5168356
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||||||||  |||||||| ||||||||| ||||||  ||||||||||    
T  5168270 tattgctttgatttttgtgccactacctcattttctttgtaaaattttagttgtcacaaaagttgtcatatatatgaatgttcaaat 5168356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 7076552 - 7076466
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| || ||  |||||||||||||||||||||| |||||||| ||||||||||||||||  ||||||||||    
T  7076552 tattgctttggtttttgtgccattacttcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaat 7076466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 14923160 - 14923246
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| |||||||| |||||||||||||| || ||||  |||||||||||||||| |||||||||||    
T  14923160 tattgctttggtttttgtgccactacctcatttcttttgtaaaattttggttttcacgaaagttgtcacatatatcgatgttcaaat 14923246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 41321342 - 41321428
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||| ||||| ||||||||||| || ||||||||||||||||||||||| |||||||| || ||||||||||||| ||| |||||||    
T  41321342 tattactttggtttttgtgtcaatacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatattcaaat 41321428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 8686978 - 8687064
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| ||||||||||| || ||||||| |||||||||||||||||||| | | ||||||||||||||||  ||||||||||    
T  8686978 tattgttttggtttttgtgtcaatacctcattttctttgtaaaattttgattgttataaaagttgtcacatatatgaatgttcaaat 8687064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 14051299 - 14051218
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgtt 221  Q
    ||||| |||| |||||||| ||||| ||||||| ||||||||||||||| |||||||| ||||| |||||||||| ||||||    
T  14051299 tattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttatcacatatatggatgtt 14051218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 28467437 - 28467354
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttca 223  Q
    ||||| |||| |||||||||||||  |||||||||||| |||||||||| |||||||| || |||||||||||||  |||||||    
T  28467437 tattgttttggtttttgtgtcactgcctcatttcctttataaaattttggttgtcacaaaaattgtcacatatatgaatgttca 28467354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 39591767 - 39591853
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||| ||||||| | |||||||| |||||||||| |||| |||||||| | ||||||| ||| ||||||||||||||    
T  39591767 tattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaat 39591853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 39592159 - 39592245
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||| ||||||| | |||||||| |||||||||| |||| |||||||| | ||||||| ||| ||||||||||||||    
T  39592159 tattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaat 39592245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 35646470 - 35646527
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||  ||||||||    
T  35646470 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 35646527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 42175008 - 42175092
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||| ||||||| |||||||||||| |  ||||||||| ||||||||||| ||||| | |||||| ||||||||| |||||||||||    
T  42175008 tattcctttgatctttgtgtcactacc--atttcctttataaaattttgactgtcataaaagttgacacatatatcgatgttcaaat 42175092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 15479556 - 15479642
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| || || ||||| || |||||||  ||||||||||||| ||||||||| |||||||||||| ||| |||||||||||    
T  15479556 tattgttttggttattttgtcaatacctcattttttttgtaaaattttaattgtcacaaaagttgtcacatttatggatgttcaaat 15479642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 39054674 - 39054760
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||||||||  | ||| |||||| ||||| |||||||||||| ||||| |||||||||  || || |||||||||||    
T  39054674 tattgctttgatttttgtgcaaatatatcattttctttgcaaaattttgattatcacaaaagttgtcatctaaatggatgttcaaat 39054760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 35634789 - 35634733
Alignment:
Q  170 tttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||||||| || ||| | |||||||||||||||| |||||||||||    
T  35634789 tttcctttgtaaaattttggttatcataaaagttgtcacatatatggatgttcaaat 35634733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 7552944 - 7552865
Alignment:
Q  147 ttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||| ||  |||||| ||||| ||||||||| |||||||| |||||||||  || || |||||||||||    
T  7552944 ttgatttttgtgtcaatacatcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaat 7552865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 17626084 - 17626159
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||    
T  17626084 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaat 17626159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 19521987 - 19521950
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttccttt 177  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  19521987 tattgctttgatttttgtgtcactacctcatttccttt 19521950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 33958243 - 33958175
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcac 208  Q
    |||||||||| ||||||||||| |||||| ||| ||||||||| || || |||||| | ||||||||||    
T  33958243 tattgctttggtttttgtgtcaatatctctttttctttgtaaatttatggttgtcataaaagttgtcac 33958175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 18660846 - 18660919
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatat 214  Q
    |||||||||| |||||||| || ||  ||||||||||||||||| ||||||||| ||| ||||| | ||||||||    
T  18660846 tattgctttggtttttgtgccaatacttcatttcctttgtaaaagtttgattgt-acaaaagttatgacatatat 18660919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 1079936 - 1079879
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    ||||||||||  ||||||| || || ||||||| |||||||||||||| |||||||||    
T  1079936 tattgctttggattttgtgccaatacctcattttctttgtaaaattttaattgtcaca 1079879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 13309975 - 13310056
Alignment:
Q  145 ctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| ||||||||| | || ||||||| |||||||||| |||||||||| || || ||||||  || || |||||||||||    
T  13309975 ctttggtttttgtgttaatacctcattttctttgtaaaaatttgattgtctcaaaaattgtcatctaaatggatgttcaaat 13310056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 27546155 - 27546239
Alignment:
Q  142 ttgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||| ||||| |||||  ||| ||||||| | || |||||||| || ||||||||||| | |||| | |||||||    
T  27546155 ttgctttgatttttatgtcaatatctatttttctttgtacatttatgattgtctcaaaagttgtcacacaaatagttattcaaat 27546239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 39440571 - 39440657
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||  ||||||||||    
T  39440571 tattgctttgatttttgtgtcactacctcatttcctttctaaaattttgattgtcacaaaagttgtcacatatatgaatgttcaaat 39440657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 26492094 - 26492180
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  26492094 tattgctttggtttttgtgccactacttcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatagatgttcaaat 26492180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 38376474 - 38376388
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||| || || ||||||||||||||||||||||    
T  38376474 tattactttgatttttgtgccactatctcattttctttgtaaaattttgattgtcacaaaaattatcacatatatagatgttcaaat 38376388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 43175075 - 43175157
Alignment:
Q  144 gctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  43175075 gctttggtttttgtgtcactacctcatttcctttgtaaaattttgattatcacaaaagttgtcacatatatggatgttcaaat 43175157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 11068775 - 11068861
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| ||| |||| ||||||||||||||||  ||||||||||    
T  11068775 tattgctttgatttttgtgtcactgcctcatttcctttgtaaaattttggttgccacaaaagttgtcacatatatgaatgttcaaat 11068861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 23369316 - 23369230
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| |||||||||||||||| |||||| |||||||| |||||||||||||||| |||||||||||    
T  23369316 tattgctttggtttttgtgccactacctcatttcctttgtaagattttggttgtcacaaaagttgtcacatatatggatgttcaaat 23369230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 24575835 - 24575749
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| || || |||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  24575835 tattgctttggtttttgtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatagatgttcaaat 24575749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 44539821 - 44539907
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||  ||||||||||    
T  44539821 tattgctttggtttttgtgacactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaat 44539907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 51986129 - 51986215
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||| ||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  51986129 tatttctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 51986215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 53801743 - 53801657
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||  ||||||||||| || ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  53801743 tattgctttagtttttgtgtcaatacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 53801657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 27965074 - 27965158
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||||||||| ||||||||| ||  ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  27965074 tattgctttggtttttgtgtcactacctcatttccatt--aaaattttggttgtcacagaagttgtcacatatatggatgttcaaat 27965158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 26732312 - 26732398
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| |||||||| ||||| ||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  26732312 tattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 26732398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 37297136 - 37297221
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||| |||||| |||||||||||    
T  37297136 tattgctttggtttttgtgtcactacctcatttcctt-gtaaaattttggttgtcacaaaagttgtcaaatatatggatgttcaaat 37297221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 37997341 - 37997427
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||||||||||| || ||||||| ||||||||||||||| |||| ||| || || ||||||||||||||||||||||    
T  37997341 tattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtaacaaaaattatcacatatatagatgttcaaat 37997427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 29175314 - 29175398
Alignment:
Q  142 ttgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||| ||||||||||| || ||||||| ||||||||||||||| |||||||| ||||||||||||||||  ||||||||||    
T  29175314 ttgctttggtttttgtgtcaatagctcatttactttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaat 29175398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 10250499 - 10250413
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| |||||  |||||| ||||||||||||||| |||||||| |||||||| ||||||| |||||||||||    
T  10250499 tattgctttggtttttgtgccactacttcattttctttgtaaaattttggttgtcacaaaagttgtcgcatatatggatgttcaaat 10250413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 26724956 - 26724870
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||||||  |||| ||| ||||| |||||||||| |||||||||||    
T  26724956 tattgttttggtttttgtgtcactacctcatttcctttgtaaaattttagttgttacaaaagttatcacatatatggatgttcaaat 26724870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 27051070 - 27050984
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| ||||||||||| |||||||||| ||||||||||||||| |||||||| |||||||||||| |||  ||||||||||    
T  27051070 tattgttttggtttttgtgtcaatatctcattttctttgtaaaattttggttgtcacaaaagttgtcacatttatgaatgttcaaat 27050984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 31641548 - 31641463
Alignment:
Q  141 attgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||| |||||||| ||||| |||| |||||  ||||||||||    
T  31641548 attgctttgatttttgtgtcactaccttatttcctttataaaattttggttgtcacaaaagttatcacgtatatgaatgttcaaat 31641463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 39478524 - 39478605
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgtt 221  Q
    |||| ||||||||||||||||| || ||||||| ||||||||||||||| |||||||| ||||||||| |||||| ||||||    
T  39478524 tattactttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcatatatatggatgtt 39478605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 40348881 - 40348949
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcac 208  Q
    |||||||||| |||||||||||||||||||||| ||||  |||||||||||||||||| ||||||||||    
T  40348881 tattgctttggtttttgtgtcactatctcattttctttaaaaaattttgattgtcacaaaagttgtcac 40348949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 5622545 - 5622631
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||||||  |||| ||||||||||||||||||||||  || ||||| ||||||| |||||||||||| |||||||    
T  5622545 tattgctttggtttttgtgcaactacctcatttcctttgtaaaattttagttatcacaaaagttgtgacatatatagatcttcaaat 5622631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 15175633 - 15175719
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||  ||||||||  | || ||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||||    
T  15175633 tattgcttttgtttttgtgctaatacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaat 15175719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 36177993 - 36178079
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||  ||||| |||||||||||| |||||||||  |||||||| ||||| ||||||||||| ||||||||||    
T  36177993 tattgctttggtttttgtaccactacctcatttcctttataaaattttagttgtcacaaaagttatcacatatataaatgttcaaat 36178079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 38134440 - 38134526
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| |||||||||||||  ||||||||||||||||||||||| || ||||| |||||||||||| |||  ||||||||||    
T  38134440 tattgttttggtttttgtgtcactgcctcatttcctttgtaaaattttggttatcacaaaagttgtcacatgtatgaatgttcaaat 38134526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 46213059 - 46213143
Alignment:
Q  142 ttgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||| ||||||||  |||| ||||||||||||||||||||||| |||| ||| ||||| |||||||||| ||| |||||||    
T  46213059 ttgctttggtttttgtgcaactacctcatttcctttgtaaaattttggttgttacaaaagttttcacatatatggattttcaaat 46213143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 34616659 - 34616734
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||| |||||||||| |||| |||||||||| ||||| || ||||||||| ||| ||||||||||||||    
T  34616659 tttttgtgtcaatatctcattttctttataaaattttggttgtctcaaaagttgtcatataaatagatgttcaaat 34616734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 2575774 - 2575688
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||| ||||||| | |||||||| |||||||||| |||  |||||||| ||||||||| ||| ||||||||||||||    
T  2575774 tattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttagttgtcacaaaagttgtcatataaatagatgttcaaat 2575688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 2268491 - 2268434
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  2268491 tattgttttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgtcaca 2268434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 29531590 - 29531533
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  29531590 tattgttttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcaca 29531533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 46634187 - 46634244
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||  ||||||||    
T  46634187 tattactttgatttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 46634244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 50608608 - 50608551
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||  ||||||||    
T  50608608 tattactttgatttttgtgtcaatatctcatttcctttgtaaaattttagttgtcaca 50608551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 39195144 - 39195230
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||| |||| || | |||||||| |||||||||| ||||||| ||||| | ||||||| ||| ||||||||||||||    
T  39195144 tattgctttggtttgtgtgccaatctctcattttctttgtaaaactttgattatcacaaatgttgtcatataaatagatgttcaaat 39195230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 42853664 - 42853750
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||||||||| || ||||||| |||| |||||||||||||||| || || |||||||  | || |||||||||||    
T  42853664 tattgctttggtttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaaattgtcactcaaatggatgttcaaat 42853750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 38382419 - 38382494
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||    
T  38382419 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaat 38382494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 45083086 - 45083145
Alignment:
Q  167 tcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||| |||| ||||||||||||||| | | |||||||||||||||| |||||||||||    
T  45083086 tcattttctttataaaattttgattgtaataaaagttgtcacatatatggatgttcaaat 45083145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 47181939 - 47182014
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||    
T  47181939 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaat 47182014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 48402170 - 48402095
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||    
T  48402170 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaat 48402095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 11672107 - 11672021
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||||||||||| ||  | |||| |||| ||||||||| | ||||||| ||||||| | ||| |||||| |||||||    
T  11672107 tattgctttgatttttgtgtcaataatttattttctttataaaattttaagtgtcacaaaagttgtaatataaatagattttcaaat 11672021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 19473934 - 19473873
Alignment:
Q  146 tttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtca 207  Q
    |||| ||||||||||| ||  |||||| ||||||||||||||||||||| || |||||||||    
T  19473934 tttggtttttgtgtcaatacttcattttctttgtaaaattttgattgtctcaaaagttgtca 19473873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 5233620 - 5233568
Alignment:
Q  174 ctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||||||||  || ||||||| ||||| ||||||||||||||    
T  5233620 ctttgtaaaattttgattgtttcaaaagttgttacataaatagatgttcaaat 5233568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 39606086 - 39606145
Alignment:
Q  167 tcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||| |||||||||| || ||  | ||||||||||||||||| ||||||||||    
T  39606086 tcatttcctttataaaattttggttatcgtaaaagttgtcacatatataaatgttcaaat 39606145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 50831739 - 50831672
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtca 207  Q
    ||||||||||||||||||||||  | ||| ||| |||||||||||| || ||||| || |||||||||    
T  50831739 tattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtcccaaaagttgtca 50831672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 39654911 - 39654953
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaa 182  Q
    |||||||||||||||||||||| || ||||||| |||||||||    
T  39654911 tattgctttgatttttgtgtcaatacctcattttctttgtaaa 39654953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 51255834 - 51255880
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattt 186  Q
    ||||||||||||||||||| |||||||| | || |||||||||||||    
T  51255834 tattgctttgatttttgtgccactatctaaatttctttgtaaaattt 51255880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 56364017 - 56363943
Alignment:
Q  152 ttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| || ||||||| |||| |||||||||| ||||| || |||||||||  || || |||||||||||    
T  56364017 ttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatgtaaatggatgttcaaat 56363943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 32924265 - 32924179
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  32924265 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 32924179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 42358622 - 42358536
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||||||||||| || ||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||    
T  42358622 tattgctttgatttttgtgtcaatacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaat 42358536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 5114165 - 5114251
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| | || |||||||||| ||||||||||||||    
T  5114165 tattgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgtcataaaaattgtcacataaatagatgttcaaat 5114251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 27541486 - 27541400
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  27541486 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 27541400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 37503731 - 37503645
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| ||||| ||||||||||| ||||||||||    
T  37503731 tattgctttgatttttgtgtcaatatctcatttcctttgcaaaattttggttgtcacaaaagttatcacatatataaatgttcaaat 37503645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 38926715 - 38926801
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||||||||| || |||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  38926715 tattgctttggtttttgtgtcactaccttatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatagatgttcaaat 38926801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 41309204 - 41309290
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||| || ||||||| |||||||||||    
T  41309204 tattgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgtcacaaaagttatcgcatatatggatgttcaaat 41309290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 42357068 - 42356982
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| || ||||||||||||| |||||||||||    
T  42357068 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatgttcaaat 42356982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 47472427 - 47472502
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  47472427 tttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaat 47472502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 288813 - 288899
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||  ||||||||||||||| ||| |||||||    
T  288813 tattgctttggtttttgtgtcactatctcatttcttttgtaaaattttgattgttacaatagttgtcacatatatggattttcaaat 288899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 5244316 - 5244402
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| || |||||||||||||| ||||||||||    
T  5244316 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatataaatgttcaaat 5244402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 19149077 - 19149163
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| |||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||    
T  19149077 tattgttttggtttttgtgccactaactcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgttcaaat 19149163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 24256755 - 24256669
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||||||||||| ||| || |||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  24256755 tattgttttgatttttgtatcaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagattttcaaat 24256669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 44413379 - 44413293
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||| | |||||||| || || |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  44413379 tattgcttcggtttttgtgccaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagatgttcaaat 44413293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 44813223 - 44813309
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||| | |||||||| ||||| || |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  44813223 tattgcttgggtttttgtgccactacctaatttcctttgtaaaattttgattgccacaaaagttgtcacatatatagatgttcaaat 44813309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 44856040 - 44856126
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||||||| |||||| | |||||||||||||||| |||||||||||    
T  44856040 tatttctttgatttttgtgccactacctcatttcctttgtaaaattttggttgtcatacaagttgtcacatatatggatgttcaaat 44856126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 52254122 - 52254036
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||  |||||||| || ||||||||||||| |||||||||||    
T  52254122 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaat 52254036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 52939738 - 52939824
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||  |||||||||||||||| |||||||||||    
T  52939738 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatggatgttcaaat 52939824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 20547974 - 20547901
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatata 213  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  20547974 tattgctttgatttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatata 20547901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 16969550 - 16969464
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||||||||| || ||||| ||||||||||||||||||||||  |||||||| |||||||||||||||| |||||||||||    
T  16969550 tattgttttgatttttatgccactacctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaat 16969464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 33939325 - 33939411
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||||||||||||  |||||||||||| | ||||||| |||||||| |||||||||||||||| |||||||||||    
T  33939325 tattgctttggtttttgtgtcactacttcatttcctttgaataattttggttgtcacaaaagttgtcacatatatggatgttcaaat 33939411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 36670998 - 36670912
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| ||||| |||||||||| |||||||||||    
T  36670998 tattgctttggtttttgtgccactacctcatttcatttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaat 36670912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 46623994 - 46624080
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| |||||||||||||| ||||||| |||||||||||||||||||||||| ||||| |||||| ||| |||||||||||    
T  46623994 tattgttttggtttttgtgtcactacctcattttctttgtaaaattttgattgtcacaaaagttatcacatgtatggatgttcaaat 46624080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 55151698 - 55151615
Alignment:
Q  143 tgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||| ||||||||||| ||  ||||||||||||||||||||| ||||| ||| ||||||||||||||||| ||||||||||    
T  55151698 tgctttggtttttgtgtcaatacttcatttcctttgtaaaattttaattgtaacaaaagttgtcacatatataaatgttcaaat 55151615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 7934062 - 7934147
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||||  |||||||| || ||||||||||||| |||||||||||    
T  7934062 tattgctttggttttt-tgtcactatctcatatcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaat 7934147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 31157661 - 31157575
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| ||||||||||||  || || || |||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||    
T  31157661 tattgttttgatttttgtaccaatacctaatttcctttgtaaaattttgatagtcacagaagttatcacatatatggatgttcaaat 31157575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 35597249 - 35597323
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatat 214  Q
    ||||| |||| |||||||||||||| ||| ||||||||||||||||||| |||||||| ||||||||||||||||    
T  35597249 tattgttttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgtcacaaaagttgtcacatatat 35597323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 37302633 - 37302719
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||| ||||| |||||||| ||||| ||||||||||||| |||||||||||||||||| ||||||||| || ||| |||||||||||    
T  37302633 tattactttggtttttgtgccactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcaaatgtatggatgttcaaat 37302719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 13735836 - 13735903
Alignment:
Q  159 tcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||| |||||||||||    
T  13735836 tcactacctcatttcctttgcaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 13735903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 26014899 - 26014985
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| |||||||| |  || ||||||||||||||||||||||| |||||||| |||||||||||| |||||||||| ||||    
T  26014899 tattgttttggtttttgtgcccttacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatagatgtttaaat 26014985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 41505578 - 41505635
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  41505578 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcaca 41505635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 44413906 - 44413849
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  44413906 tattgctttggtttttgtgtcaatatctcattttctttgtaaaattttgattgtcaca 44413849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 52326132 - 52326192
Alignment:
Q  166 ctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||||||||||||||||||| | ||||||||| |||||| |||||||||||    
T  52326132 ctcatttcctttgtaaaattttgattgtcataaaagttgtcatatatatggatgttcaaat 52326192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 7668171 - 7668086
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||| || |||||||| |||||||| | ||||||||| |||||||| |||||||||||| ||| |||||||||||    
T  7668171 tattgctttggtttttatgccactatcttatttcctt-gcaaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaat 7668086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 13348118 - 13348032
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||||| ||| || ||||||| ||||||||||||||| ||||| || ||||||||| ||| || |||||||||||    
T  13348118 tattgctttggtttttgtatcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgttcaaat 13348032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 35377065 - 35376979
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||||||| || ||  |||||| ||||||||||||||| |||||||| |||||||||  || || |||||||||||    
T  35377065 tattgctttgatttttgtgccaatacatcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaat 35376979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 44383286 - 44383362
Alignment:
Q  150 atttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||| || ||||||| |||| |||||||||||||||| || ||||||||| ||| || |||||||||||    
T  44383286 atttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaagttgtcatataaatggatgttcaaat 44383362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 8847197 - 8847282
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| |||||||| || || |||||||  ||||||||||||||||| ||||| ||||||| |||||||| |||||||||||    
T  8847197 tattgttttggtttttgtgccaatacctcattttatttgtaaaattttgattatcacaaaagttgt-acatatatggatgttcaaat 8847282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 44445389 - 44445467
Alignment:
Q  148 tgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||  | |||||||||| |||| |||||||||| |||||| | ||||||| |||||||| |||||||||||    
T  44445389 tgatttttgtgcaaatatctcattttctttataaaattttggttgtcataaaagttgttacatatatcgatgttcaaat 44445467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 50318361 - 50318316
Alignment:
Q  152 ttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||    
T  50318361 ttttgtgccactatctcatttcctttgtaaaattttggttgtcaca 50318316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 21217610 - 21217685
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||    
T  21217610 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaat 21217685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 23592556 - 23592631
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||    
T  23592556 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaat 23592631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 37057030 - 37056955
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||| || ||||||| ||||||||||| ||| ||||| || ||||||||| ||| || |||||||||||    
T  37057030 tttttgtgtcaatacctcattttctttgtaaaatattggttgtctcaaaagttgtcatataaatggatgttcaaat 37056955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 35201418 - 35201332
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| ||||||||||| ||||| |||| ||||||| |||||| |||||| || |||||||||  || || |||||||||||    
T  35201418 tattgttttggtttttgtgtcaatatcttattttctttgtataattttaattgtctcaaaagttgtcatttaaatggatgttcaaat 35201332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 44463449 - 44463530
Alignment:
Q  145 ctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||| ||| |||| ||||| |||||||||||||||||| || || ||||| ||| |||  | |||||||||||    
T  44463449 ctttgatttttgtatcaatatcacattttctttgtaaaattttgattatctcaaaagttatcatataatttgatgttcaaat 44463530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 14226683 - 14226635
Alignment:
Q  146 tttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtc 194  Q
    |||| ||||||||||| ||| |||||| |||||||||||||||||||||    
T  14226683 tttggtttttgtgtcaatatttcattttctttgtaaaattttgattgtc 14226635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 45000150 - 45000198
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttg 188  Q
    ||||| |||| |||||||| ||||| |||||||||||||||||||||||    
T  45000150 tattgatttggtttttgtgccactacctcatttcctttgtaaaattttg 45000198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 42889074 - 42889158
Alignment:
Q  142 ttgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||| |||||||| || || ||||||| ||||||||||||||| || |  || |||||||||  || ||||||||| ||||    
T  42889074 ttgctttggtttttgtgccaataactcattttctttgtaaaattttggttatatcaaaagttgtcatctaaatagatgtttaaat 42889158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 45711423 - 45711355
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcac 208  Q
    ||||| |||| || |||||||| ||  |||||| ||||||||||||||| |||| ||| ||||||||||    
T  45711423 tattgttttggttattgtgtcaatacttcattttctttgtaaaattttggttgttacaaaagttgtcac 45711355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 18254193 - 18254107
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  18254193 tattgctttggtttttgtgccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 18254107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 22888801 - 22888715
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| || || |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  22888801 tattgctttggtttttgtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaat 22888715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 37737955 - 37737869
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||||| || ||||||||    
T  37737955 tattgctttgatttttgtgtcaatatctcatttcctttgtaaagttttggttgtcacaaaagttgtcacatatatggacgttcaaat 37737869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 6049327 - 6049243
Alignment:
Q  142 ttgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||| |||||||| || || |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  6049327 ttgctttggtttttgtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaat 6049243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 1248773 - 1248859
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||||| ||| ||||| |||||||||||||||| |||||||||||    
T  1248773 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatggatgttcaaat 1248859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 2076656 - 2076742
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||||||||||| || ||||||| ||||||||||||||| |||||||| |||||||||||| ||| |||||||||||    
T  2076656 tattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatctattgatgttcaaat 2076742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 3838864 - 3838778
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| ||||||||||||||||||   ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  3838864 tattgttttgatttttgtgtcactgcttcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatagatgttcaaat 3838778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 9207677 - 9207763
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| || || ||||||||||||||||||||||    
T  9207677 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattatcacatatatagatgttcaaat 9207763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 41195671 - 41195757
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||| ||||||||  ||||||||||    
T  41195671 tattgctttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgaatgttcaaat 41195757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 43487466 - 43487552
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| |||| ||| || ||||||||||||| |||||||||||    
T  43487466 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgttacaaaaattgtcacatatatggatgttcaaat 43487552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 19633371 - 19633456
Alignment:
Q  142 ttgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtc-acatatatagatgttcaaat 226  Q
    |||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| ||||| || ||||||||| ||||||||||    
T  19633371 ttgctttggtttttgtatcactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaat 19633456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 19830272 - 19830357
Alignment:
Q  142 ttgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtc-acatatatagatgttcaaat 226  Q
    |||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| ||||| || ||||||||| ||||||||||    
T  19830272 ttgctttggtttttgtatcactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaat 19830357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 42091488 - 42091400
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacata--tatagatgttcaaat 226  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||||||| |||||||| || ||||||||||  |||||||||||||||    
T  42091488 tattgctttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgtcacaaaaattgtcacatatatatagatgttcaaat 42091400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 7698258 - 7698340
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttc 222  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  7698258 tattgctttgatttttgtgccactacctaatttcctttgtaaaattttaattatcacaaaagttatcacatgtatagatgttc 7698340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 9647219 - 9647305
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||||| |||||||| ||||| || |||||||  ||||||||||    
T  9647219 tattgctttggtttttgtgtcactacttcatttcctttgtaaaattttggttgtcacaaaagttatcgcatatatgaatgttcaaat 9647305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 9760117 - 9760191
Alignment:
Q  152 ttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||| ||||| ||||||||||| | ||||||||| |||||||| ||||||||||||||||||||||||||||    
T  9760117 ttttgtgccactacctcatttccttggaaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaat 9760191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 9990778 - 9990864
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||  |||||  ||||||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||||    
T  9990778 tattgctttggtttttgtaccactacttcatttcctttgtaaaattttaattgtcacaaaagttatcacatatatggatgttcaaat 9990864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 32477419 - 32477505
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||||||| | | || |||||||||||||| |||||||| |||||||| ||||||||||||||||  ||||||||||    
T  32477419 tattgctttgatttttgtatgaatacctcatttcctttgtcaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaat 32477505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 34945074 - 34945000
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatat 214  Q
    ||||||||||||||||||| ||||| |||||||| |||||||||||||| |||||||  ||||||||||||||||    
T  34945074 tattgctttgatttttgtgccactacctcatttcttttgtaaaattttggttgtcacgaaagttgtcacatatat 34945000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 41042341 - 41042427
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||| ||||| ||||||||||||||| |||||||||| |||||| | || ||||||||||||| |||||||||||    
T  41042341 tattgctttggtttttatgtcaatatctcatttcctttataaaattttggttgtcataaaaattgtcacatatatggatgttcaaat 41042427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 42421882 - 42421796
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| | |||||| ||||| |||||||||||| |||||||||| |||||||| ||||||||||||||||  ||||||||||    
T  42421882 tattgctttggtgtttgtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaat 42421796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 6511338 - 6511395
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    |||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  6511338 tattgctttggtttttgtgtcactacctcatttcctttataaaattttgattgtcaca 6511395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 21611644 - 21611553
Alignment:
Q  140 tattgctttgatttttgtgtcactatctca-----tttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||||||| ||||| ||||     |||| |||||||||||||| |||||| | |||||||||||||||| |||||||||||    
T  21611644 tattgctttgatttttgtgccactacctcaccttatttcatttgtaaaattttggttgtcataaaagttgtcacatatatggatgttcaaat 21611553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 27490714 - 27490647
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtca 207  Q
    |||||||||||||||||||| | ||  |||||| |||||||||||||||||||||||| |||||||||    
T  27490714 tattgctttgatttttgtgttaatacatcattttctttgtaaaattttgattgtcacaaaagttgtca 27490647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 19109077 - 19108993
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaa 224  Q
    ||||||||||||||||||| |||||  |||||||||||| ||||  ||  |||||||| ||||||||||||||||  ||||||||    
T  19109077 tattgctttgatttttgtgccactacttcatttcctttgcaaaaaatttgttgtcacaaaagttgtcacatatatgaatgttcaa 19108993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 9194328 - 9194414
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| |||||||| || || |||||||| |||||||||||||| |||||||| || |||| ||||||||  ||||||||||    
T  9194328 tattgttttggtttttgtgccattacctcatttcttttgtaaaattttggttgtcacaaaaattgttacatatatgaatgttcaaat 9194414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 17388576 - 17388530
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||    
T  17388576 tttttgtgccactacctcatttcctttgtaaaattttgattgtcaca 17388530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 41056720 - 41056645
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||    
T  41056720 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaat 41056645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 8848681 - 8848595
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||||||  || ||  |||||| ||||| |||||||||||||||||| || || |||  || ||||||||||||||    
T  8848681 tattgctttgatttttgtaccaatacatcattttctttgcaaaattttgattgtcacaaaaattatcatctaaatagatgttcaaat 8848595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 22416300 - 22416357
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    |||||||||| |||||||| ||||  ||||||| ||||||||||||||| ||||||||    
T  22416300 tattgctttggtttttgtgccactgcctcattttctttgtaaaattttggttgtcaca 22416357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 3097834 - 3097759
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||| | || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||    
T  3097834 tttttgtgtaaataactcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaat 3097759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 13333143 - 13333068
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||| ||  |||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||    
T  13333143 tttttgtgtcaatacatcattttctttataaaattttggttgtctcaaaagttgtcatataaatcgatgttcaaat 13333068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 25270555 - 25270480
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| |  ||||||||| ||| || |||||||||||    
T  25270555 tttttgtgtcaatacctcattttctttataaaattttggttgtctcgaaagttgtcatataaatggatgttcaaat 25270480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 39147853 - 39147920
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtca 207  Q
    ||||| |||||||||||||||| || |||||||  |||||||| || |||||||| || |||||||||    
T  39147853 tattgttttgatttttgtgtcaatacctcattttttttgtaaatttatgattgtcccaaaagttgtca 39147920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 29349622 - 29349660
Alignment:
Q  169 atttcctttgtaaaattttgattgtcacagaagttgtca 207  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  29349622 attttctttgtaaaattttgattgtcacaaaagttgtca 29349660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 22446008 - 22445967
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaa 181  Q
    ||||||||| |||||||||||| || ||||||||||||||||    
T  22446008 tattgctttaatttttgtgtcaatacctcatttcctttgtaa 22445967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 44287426 - 44287369
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    ||||| |||| || ||||| ||| | ||||||||||||||||||||||| ||||||||    
T  44287426 tattgttttggttattgtgccacaacctcatttcctttgtaaaattttggttgtcaca 44287369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 7e-30; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 35369787 - 35369873
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||| |||||||||||||||| |||||||||||    
T  35369787 tattgctttgatttttgtgtcactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 35369873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 45333798 - 45333884
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| || || ||||||||||||||||||||||    
T  45333798 tattgctttgatttttgtgtcactacctcatttcctttgtaaaattttaattgtcacaaaaattatcacatatatagatgttcaaat 45333884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 649856 - 649942
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| | |||||||||||    
T  649856 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatgtggatgttcaaat 649942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 26469446 - 26469532
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||| | |||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  26469446 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 26469532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 27465041 - 27464955
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  27465041 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 27464955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 50932391 - 50932477
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||||    
T  50932391 tattgctttgatttttgtgtcaatacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaat 50932477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 33100895 - 33100981
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| ||||||||||||||||||| |||||||||||| |||||||||| |||||||| ||||||||||||||||  ||||||||||    
T  33100895 tattgttttgatttttgtgtcactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaat 33100981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 37275017 - 37274931
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||| ||  |||||||||||    
T  37275017 tattgctttggtttttgtgtcactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtaaggatgttcaaat 37274931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 45121464 - 45121379
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  45121464 tattgctttggtttttgtgccacta-ctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 45121379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 48470726 - 48470812
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| ||| |||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  48470726 tattgttttggtttctgtgccaatatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaat 48470812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 19055743 - 19055657
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| |||||||| || |||||||||||||||||||||||||  |||||||| |||||||||||||||| |||||||||||    
T  19055743 tattgttttggtttttgtgacaatatctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaat 19055657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 31088268 - 31088354
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| |||||||  |||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  31088268 tattgctttggtttttgtgccactacctcattttttttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 31088354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 45640389 - 45640474
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||| |||  ||| ||||||||||||||||||||||||||||    
T  45640389 tattgctttgatttttgtgccaatatctcatttc-tttgtaaaattttggttgcaacaaaagttgtcacatatatagatgttcaaat 45640474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 44914556 - 44914469
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcac-agaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||  |||||||||||||| ||||||||||||||||||||||||||||| | | || ||||||||||||| |||||||||||    
T  44914556 tattgctttagtttttgtgtcactacctcatttcctttgtaaaattttgattgtcgcaaaaaattgtcacatatatggatgttcaaat 44914469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 3851245 - 3851331
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| ||||| |||||||| |||||||||||| |||||||||| |||||| | |||||||||||||||| |||||||||||    
T  3851245 tattgttttggtttttctgtcactacctcatttcctttataaaattttggttgtcataaaagttgtcacatatatggatgttcaaat 3851331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 3982010 - 3981924
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| || |||||||| |||||||||| |||||||||||||||||||||||| | |||||||||| ||| |||||||||||    
T  3982010 tattgttttggttattgtgtcaatatctcattttctttgtaaaattttgattgtcacaaatgttgtcacatttatggatgttcaaat 3981924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 8350182 - 8350097
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||||||||| || ||||||||||| |||||||| |||||||  |||||||||||||||| |||||||||||    
T  8350182 tattgctttggtttttgtgtcactaccttatttcctttgt-aaattttggttgtcacgaaagttgtcacatatatggatgttcaaat 8350097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 23645498 - 23645584
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| |||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||| ||||||||  ||||||||||    
T  23645498 tattgttttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgtatgttcaaat 23645584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 37619631 - 37619717
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||| |||||||||||| || || ||||||||||||||||||||||| |||| | | |||||||||||||||| |||||||||||    
T  37619631 tattgcgttgatttttgtgccaatacctcatttcctttgtaaaattttggttgtaataaaagttgtcacatatatggatgttcaaat 37619717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 37685416 - 37685502
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| || || |||||| |||  ||||||||||    
T  37685416 tattgctttgatttttgtgtcactacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaat 37685502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 37700102 - 37700016
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| || || |||||| |||  ||||||||||    
T  37700102 tattgctttgatttttgtgtcactacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaat 37700016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 44519135 - 44519049
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||||||||  | || ||||||||||||||||||||||| || ||||| ||||||||||||||||  ||||||||||    
T  44519135 tattgctttgatttttgtgctaatacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatgaatgttcaaat 44519049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 40861241 - 40861160
Alignment:
Q  145 ctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||||||| |||||||| ||||||||| |||||||||  |||||||| |||||| |||||||||||||||||||||    
T  40861241 ctttggtttttgtgccactatcttatttcctttataaaattttagttgtcacaaaagttgacacatatatagatgttcaaat 40861160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 50726232 - 50726146
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| ||||||||||||| ||||| ||||||| ||||| ||||||||| |||||||| || || |||||||||| |||||||||||    
T  50726232 tattgttttgatttttgtgccactacctcattttctttgcaaaattttggttgtcacaaaaattatcacatatatggatgttcaaat 50726146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 21401491 - 21401571
Alignment:
Q  146 tttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||| ||||||||||| || ||||||| ||||||||||||||||||||  || ||||||||||||| || |||||||||||    
T  21401491 tttggtttttgtgtcaatacctcattttctttgtaaaattttgattgtttcaaaagttgtcacataaatggatgttcaaat 21401571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41983072 - 41983024
Alignment:
Q  1 ttctttcatatcatggttgattaagtgaagtatgcaatgcaatttttca 49  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41983072 ttctttcatatcatggttgattaagtgaagtatgcaatgaaatttttca 41983024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 43775304 - 43775367
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatat 214  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||| | ||||||||||||||||    
T  43775304 tttttgtatcaatatctcattttctttgtaaaattttgattgtcataaaagttgtcacatatat 43775367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 52576286 - 52576212
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatat 214  Q
    |||||||||| |||||||| |  || ||||||||||||||||||||||| |||||||| |||||||||| |||||    
T  52576286 tattgctttggtttttgtgccggtacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacctatat 52576212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 206
Target Start/End: Original strand, 4776843 - 4776909
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtc 206  Q
    |||| |||||||||||||| ||||| |||||||||||| ||||||||  ||||||||| ||||||||    
T  4776843 tattactttgatttttgtgccactacctcatttcctttataaaatttaaattgtcacaaaagttgtc 4776909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 30467517 - 30467431
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||| ||||||| | |||| ||| |||||||||| |||  |||||||| ||||||||| |||  |||||||||||||    
T  30467517 tattgctttgatttgtgtgtcaatctctcgttttctttgtaaaactttagttgtcacaaaagttgtcatataattagatgttcaaat 30467431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 2571732 - 2571809
Alignment:
Q  150 atttttgtgtcactatctcatttcctttgt-aaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||| ||||||| |||||| ||||||||| |||||||| ||||||||| ||  || |||||||||||    
T  2571732 atttttgtgtcactacctcattttctttgttaaaattttggttgtcacaaaagttgtcatatgcatggatgttcaaat 2571809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 51718604 - 51718540
Alignment:
Q  146 tttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacat 210  Q
    |||||||||||||||||||  |||||||||||||||| ||||  || ||||| ||||||||||||    
T  51718604 tttgatttttgtgtcactacttcatttcctttgtaaagttttagttatcacaaaagttgtcacat 51718540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 46907293 - 46907368
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||| || ||||||| |||| |||||||||||||||| || ||||||||  ||| || |||||||||||    
T  46907293 tttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaagttgtcgtataaatggatgttcaaat 46907368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 3159463 - 3159521
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacag 198  Q
    |||||||||  |||||||| ||||| ||||||||||||||||||||||| |||| ||||    
T  3159463 tattgcttttgtttttgtgccactacctcatttcctttgtaaaattttggttgttacag 3159521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 12657309 - 12657367
Alignment:
Q  140 tattgctttgatttttgtgtc-actatctcatttcctttgtaaaattttgattgtcaca 197  Q
    |||||||||| |||||||||| |||| |||||||||||| |||||||||| ||||||||    
T  12657309 tattgctttggtttttgtgtccactacctcatttcctttataaaattttggttgtcaca 12657367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 15083034 - 15082961
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatat 214  Q
    |||||||||| ||||||||||| ||  ||||||||||||||||| ||||||||| ||| ||||| | ||||||||    
T  15083034 tattgctttggtttttgtgtcaatacttcatttcctttgtaaaagtttgattgt-acaaaagttttgacatatat 15082961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 18434882 - 18434968
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| ||||||||||||| || ||  |||||| ||||| ||||||||| |||||||| |||||||||  || |||||| |||||||    
T  18434882 tattgttttgatttttgtgccaatacatcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatagattttcaaat 18434968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 26021060 - 26020974
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| ||||||| |||||||| |||||| |||  |||||||||||||||||||| || ||| ||||| ||| ||  ||||||||||    
T  26021060 tattgatttgattattgtgtcaatatctctttttttttgtaaaattttgattgtctcaaaagatgtcatataaatgaatgttcaaat 26020974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 31827038 - 31827124
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| ||||||||||| || |||||||  |||||||||||||| ||||  || |||||||||  || ||||||||||||||    
T  31827038 tattgatttggtttttgtgtcaataactcattttttttgtaaaattttggttgtatcaaaagttgtcatctaaatagatgttcaaat 31827124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 50149033 - 50149119
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||||||||| |   |||||| ||||||||||||||||||||  || ||||||||| ||| |  |||||||||||    
T  50149033 tattgctttggtttttgtgtcaatcaatcattttctttgtaaaattttgattgttgcaaaagttgtcatataaaatgatgttcaaat 50149119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 6693244 - 6693301
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    ||||| |||| ||||| ||||| || |||||||||||||||||||||||||| |||||    
T  6693244 tattgttttggtttttatgtcaatacctcatttcctttgtaaaattttgattatcaca 6693301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 187
Target Start/End: Complemental strand, 37985370 - 37985323
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaatttt 187  Q
    ||||||||| ||||||||| ||||| |||||||||||| |||||||||    
T  37985370 tattgctttaatttttgtgacactacctcatttcctttataaaatttt 37985323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 10627794 - 10627708
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||||||||||| ||| || | ||||| |||| |||||||||| ||||| || || |||||||||| ||| ||||| ||||    
T  10627794 tattgttttgatttttgtatcaataccacattttctttataaaattttgtttgtctcaaaaattgtcacatagatatatgttgaaat 10627708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 15470040 - 15469955
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| |||||| |  |||| |||||||||||| ||||||||| ||||||||| || || ||||||||||  ||||||||||    
T  15470040 tattgttttggtttttgcgctactacctcatttcctttataaaattttaattgtcaca-aaattatcacatatatgaatgttcaaat 15469955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 27533468 - 27533414
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtc 194  Q
    ||||| |||||||||| ||||| || ||||||| ||||||||||||||| |||||    
T  27533468 tattgttttgatttttatgtcaatacctcattttctttgtaaaattttggttgtc 27533414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 206
Target Start/End: Original strand, 48261227 - 48261293
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtc 206  Q
    |||||||||| |||||||| || || ||| |||||||||||||| | |||||||| || ||||||||    
T  48261227 tattgctttggtttttgtgccaatacctcttttcctttgtaaaaatatgattgtctcaaaagttgtc 48261293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 48858911 - 48858957
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattt 186  Q
    |||||||||||||||||||||||||||| | || ||||||| |||||    
T  48858911 tattgctttgatttttgtgtcactatctaaatttctttgtataattt 48858957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 51436658 - 51436612
Alignment:
Q  145 ctttgatttttgtgtcactatctcatttcctttgtaaaattttgatt 191  Q
    ||||||||||||||||| |||||| ||| |||||||||| |||||||    
T  51436658 ctttgatttttgtgtcaatatctcgttttctttgtaaaactttgatt 51436612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 30735256 - 30735191
Alignment:
Q  161 actatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||| ||||||| |||| ||||||||||||||||||| || || ||||||| || ||| |||||||    
T  30735256 actacctcatttactttataaaattttgattgtcacaaaaattatcacatacatggatattcaaat 30735191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 48103318 - 48103266
Alignment:
Q  169 atttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgtt 221  Q
    |||| ||||||||||||||| ||||| || ||||||||| ||| |||||||||    
T  48103318 attttctttgtaaaattttggttgtctcaaaagttgtcatataaatagatgtt 48103266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 4054270 - 4054184
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||    
T  4054270 tattgctttggtttttgtgtcactacctcatttcatttgtaaagttttgattgtcacaaaagttgtcacatatataaatgttcaaat 4054184  T

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Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 12898913 - 12898827
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||| | ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  12898913 tattgctttggtttttgcgccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 12898827  T

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Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 7271937 - 7272020
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttca 223  Q
    |||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||| ||| ||||||||    
T  7271937 tattgctttggtttttgtgtcactatctcatttcttttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttca 7272020  T

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Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 27325845 - 27325931
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||  |||||||||||||||| |||||||||||    
T  27325845 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttgattatcacgaaagttgtcacatatatggatgttcaaat 27325931  T

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Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 32501180 - 32501094
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||| || || |||||||||| |||||||||||    
T  32501180 tattactttgatttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaaattctcacatatatggatgttcaaat 32501094  T

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Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 34186694 - 34186780
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||| ||||| |||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||| ||| |||||||||||    
T  34186694 tattactttggtttttgtgtcactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcaaat 34186780  T

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Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 5277472 - 5277397
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||    
T  5277472 tttttgtgtcactacctcatttcctttgtaaaattttgattgtcacataaattgtcacatgtatggatgttcaaat 5277397  T

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Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 36251425 - 36251499
Alignment:
Q  152 ttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  ||||| |||||||||| |||||||||||    
T  36251425 ttttgtgtcactacctcatttcctttgtaaaattttgattgtcacgaaagttatcacatatatggatgttcaaat 36251499  T

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Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 36816600 - 36816514
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||||||||| | ||  |||||| ||||| |||||||||||| ||||| ||||||||||||||||||||||||||||    
T  36816600 tattgctttgatttttgtgttaatacgtcattttctttgcaaaattttgattatcacaaaagttgtcacatatatagatgttcaaat 36816514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 11253526 - 11253440
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||||||||| || ||||||| ||||||||||||||| | |||||| ||||||||| || |||||||||||||||    
T  11253526 tattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaat 11253440  T

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Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 37449409 - 37449323
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||||||  |||| |||||||||||||||||||||||||| ||||| ||||| |||||||||| ||| |||||||    
T  37449409 tattgctttggtttttgtgctactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatggatattcaaat 37449323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 42768291 - 42768377
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||  |||||||| || || |||||||||| |||||||||||    
T  42768291 tattgctttggtttttgtgtcactgcctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaat 42768377  T

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Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 43397868 - 43397952
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaa 224  Q
    |||| ||||| |||||||| ||||||||||||| ||||||||||||||| |||||||| ||| |||||||| ||| |||||||||    
T  43397868 tattactttggtttttgtgccactatctcattttctttgtaaaattttggttgtcacaaaagctgtcacatgtatggatgttcaa 43397952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 37133846 - 37133779
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtca 207  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||||||| |||||||| |||||||||    
T  37133846 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgtcacaaaagttgtca 37133779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 22719527 - 22719613
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||||||  |||| ||||||| ||||||||||||||| || ||||| |||||||||||||||| | |||||||||    
T  22719527 tattgctttggtttttgtgcaactacctcattttctttgtaaaattttggttatcacaaaagttgtcacatatatggctgttcaaat 22719613  T

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Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 10731633 - 10731690
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  10731633 tattgctttgatttttgtgtcaatacttcatttcctttgtaaaattttgattgtcaca 10731690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 29025347 - 29025433
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||||||||| || ||||||| ||||||||||||||| ||||| || ||||||||| ||| || |||||| ||||    
T  29025347 tattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgtttaaat 29025433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 36660434 - 36660348
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| || |||||||| ||  |||||| |||| ||||||||||||||||||| ||||| |||||| ||| |||||||||||    
T  36660434 tattgctttggttattgtgtcaatacttcattttctttataaaattttgattgtcacaaaagttatcacatttatggatgttcaaat 36660348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 10692551 - 10692604
Alignment:
Q  173 cctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||    
T  10692551 cctttgtaaaattttgattgtcagagaagttgacacatatatggatgttcaaat 10692604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 24479323 - 24479384
Alignment:
Q  153 tttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatat 214  Q
    ||||||||| |||||||||||||||||||||||||  |||||||| ||||| ||| ||||||    
T  24479323 tttgtgtcaatatctcatttcctttgtaaaattttagttgtcacaaaagttatcatatatat 24479384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 31249508 - 31249451
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    |||||||||| |||||||  ||||| ||||||||||||||||||||||| ||||||||    
T  31249508 tattgctttggtttttgtaccactacctcatttcctttgtaaaattttggttgtcaca 31249451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 34085056 - 34084998
Alignment:
Q  167 tcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaa 225  Q
    ||||||| ||| |||||||||||||||  |||||||||||||||||| |||| ||||||    
T  34085056 tcatttcttttataaaattttgattgtttcagaagttgtcacatatagagatattcaaa 34084998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 5600970 - 5600924
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattt 186  Q
    ||||||||||||||||||||||| |||| | || |||||||||||||    
T  5600970 tattgctttgatttttgtgtcaccatctaaatttctttgtaaaattt 5600924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 5639650 - 5639696
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattt 186  Q
    ||||||||||||||||||||||| |||| | || |||||||||||||    
T  5639650 tattgctttgatttttgtgtcaccatctaaatttctttgtaaaattt 5639696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 44061807 - 44061851
Alignment:
Q  142 ttgctttgatttttgtgtcactatctcatttcctttgtaaaattt 186  Q
    |||||||||||||||||||||||||| | || ||||||| |||||    
T  44061807 ttgctttgatttttgtgtcactatctaaatttctttgtataattt 44061851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 38956602 - 38956516
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  38956602 tattgctttgttttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 38956516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 24614300 - 24614214
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||  ||||||||||    
T  24614300 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatgaatgttcaaat 24614214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 40112938 - 40112852
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| || ||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  40112938 tattgctttggtttttgtgccactaccttatttcctttgtaaaattttgattgtcagagaagttgttacatatatggatgttcaaat 40112852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 43025427 - 43025509
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttc 222  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||||||||    
T  43025427 tattgctttggtttttgtgccactatctcatttcctttgtaaaattttagttgttacaaaagttgtcacatatatagatgttc 43025509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 44895556 - 44895470
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||| |||||||| |||||||||||    
T  44895556 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaat 44895470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 22918153 - 22918067
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||||| ||| |||| ||||||    
T  22918153 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttgattgtcgcaaaagttgtcacatgtatggatgctcaaat 22918067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 32529840 - 32529754
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||| | |||||| |||||||||||||||||||||||||||||||| || ||||||||||||| |||| ||||||    
T  32529840 tattgctttggtttttttatcactacctcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgctcaaat 32529754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 41189527 - 41189452
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatata 215  Q
    |||||||||  ||||||||||| || |||||||||||||||||||||||||||||| | ||||| |||||||||||    
T  41189527 tattgctttagtttttgtgtcaatacctcatttcctttgtaaaattttgattgtcataaaagttatcacatatata 41189452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 3937107 - 3937021
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||| ||||| |||||||| || || |||||||||||| |||||||||| |||||||| |||||||||||| ||| |||||||||||    
T  3937107 tattactttggtttttgtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaat 3937021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 44189294 - 44189223
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacata 211  Q
    |||| ||||| |||||||||||||| ||||||||||||| ||| |||||||||||||| ||||| |||||||    
T  44189294 tattactttggtttttgtgtcactaactcatttcctttgaaaatttttgattgtcacaaaagttatcacata 44189223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 210
Target Start/End: Complemental strand, 25192901 - 25192831
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacat 210  Q
    ||||| |||| |||||||||||||| ||||||| ||||||||||||||  |||||||| ||||||||||||    
T  25192901 tattgttttggtttttgtgtcactacctcattttctttgtaaaattttagttgtcacaaaagttgtcacat 25192831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 41989726 - 41989638
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttccttt--gtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| |||||||  |||  ||||||||||| |||||||| ||||| |||||||||| |||||||||||    
T  41989726 tattgctttggtttttgtgccactacctcattttttttttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaat 41989638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 35072346 - 35072263
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttca 223  Q
    |||||||||||||||||||||| | |||||||| |||| |||||||||| ||||  || ||||||||| ||| || ||||||||    
T  35072346 tattgctttgatttttgtgtcaatgtctcattttctttataaaattttggttgtttcaaaagttgtcatataaatggatgttca 35072263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 40417861 - 40417947
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||| ||||| || |||| || ||||||||||||||| ||||| || ||||||||  ||| ||||||||||||||    
T  40417861 tattgctttggtttttatgtcaatacctcactttctttgtaaaattttggttgtctcaaaagttgtcgtataaatagatgttcaaat 40417947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 46578119 - 46578033
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| ||||||||||||| || || ||| |||| ||| |||||||||| |||||| |||| || |||||||||| |||||||||||    
T  46578119 tattgatttgatttttgtgccaatacctcgtttcttttataaaattttggttgtcatagaaattatcacatatatggatgttcaaat 46578033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 31445405 - 31445458
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgt 193  Q
    |||||||||||||||||||||| |  ||||||| ||||||||||||||||||||    
T  31445405 tattgctttgatttttgtgtcaatcactcattttctttgtaaaattttgattgt 31445458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 38073307 - 38073364
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    |||||||||| |||||||| || || ||||||||||||||||||||||| ||||||||    
T  38073307 tattgctttggtttttgtgccaatacctcatttcctttgtaaaattttggttgtcaca 38073364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 45851188 - 45851105
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||||||||   |||||||||||||||||||||  |||||| | || |||| ||| |||| |||||||||||    
T  45851188 tattgctttggtttttgtgtcact---tcatttcctttgtaaaattttagttgtcaaaaaaattgtgacagatatggatgttcaaat 45851105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 47391309 - 47391225
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaa 224  Q
    ||||| |||||||||||||||| ||| ||||||||||| |||||| |||||||||  | ||||| | ||||||||  ||||||||    
T  47391309 tattgttttgatttttgtgtcaatatttcatttcctttataaaatattgattgtcttaaaagttattacatatatgaatgttcaa 47391225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 46022240 - 46022165
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||    
T  46022240 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaat 46022165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 35098687 - 35098601
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||||||||||| | |||||||| || | |||||||||| ||||  || ||||||||| ||| || ||| |||||||    
T  35098687 tattgctttgatttttgtgtcaatgtctcattttctatataaaattttggttgtttcaaaagttgtcatataaatggatattcaaat 35098601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 41863613 - 41863535
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagat 218  Q
    |||||||||| |||||||| || || |||||||  ||||||||||||||||||||  | ||||||||| ||| ||||||    
T  41863613 tattgctttgttttttgtgccaatacctcattttatttgtaaaattttgattgtcttaaaagttgtcatataaatagat 41863535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 38861183 - 38861240
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    ||||| |||| |||||||| ||||| || |||| ||||||||||||||||||||||||    
T  38861183 tattgttttggtttttgtgccactaccttatttactttgtaaaattttgattgtcaca 38861240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 43942745 - 43942805
Alignment:
Q  166 ctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||| ||||||||||||||| ||| |||| || || |||||||||| |||||||||||    
T  43942745 ctcattttctttgtaaaattttggttgccacaaaaattatcacatatatggatgttcaaat 43942805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 7701642 - 7701717
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||| || ||||||| |||| ||||| |||| ||||| || ||||||||| ||| || |||||||||||    
T  7701642 tttttgtgtcaatacctcattttctttataaaactttggttgtctcaaaagttgtcatataaatggatgttcaaat 7701717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 12007169 - 12007123
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattt 186  Q
    ||||||||||||||||||| |||||||| | || |||||||||||||    
T  12007169 tattgctttgatttttgtgccactatctaaatttctttgtaaaattt 12007123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 48062144 - 48062198
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtc 194  Q
    ||||| |||| ||||||||||| || ||||||| |||| ||||||||||||||||    
T  48062144 tattgttttggtttttgtgtcaatacctcattttctttataaaattttgattgtc 48062198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 22925268 - 22925215
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgt 193  Q
    ||||||||| |||||||||||| ||||| |||| | ||||||||||||| ||||    
T  22925268 tattgctttaatttttgtgtcaatatcttattttccttgtaaaattttggttgt 22925215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 552880 - 552966
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  552880 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 552966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 32316912 - 32316826
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||||||||| || ||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  32316912 tattgctttggtttttgtgtcagtacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaat 32316826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 15974695 - 15974781
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||||||| ||||  |||||||||||||||||||||| |||||||| ||||||| |||||||| |||||||||||    
T  15974695 tattgctttggtttttgtgttactacttcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaat 15974781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 33430342 - 33430272
Alignment:
Q  144 gctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatat 214  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  33430342 gctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatat 33430272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 1156807 - 1156893
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||| ||||| |||||||| ||||||||||||||||||  |||||||||||||||||| ||||| ||| |||||| |||||||||||    
T  1156807 tattactttggtttttgtgccactatctcatttcctttacaaaattttgattgtcacaaaagttatcaaatatatggatgttcaaat 1156893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 14818019 - 14818105
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| |||||||| ||||| |||||||||||| |||||||||| |||||||| ||||||||| ||||||| ||||||||||    
T  14818019 tattgttttggtttttgtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcatatatataaatgttcaaat 14818105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 34047474 - 34047560
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| || |||||| ||| ||||||||||||||| |||||||| |||||||||||| ||| |||||||||||    
T  34047474 tattgctttggtttttgtgccaatatctctttttctttgtaaaattttggttgtcacaaaagttgtcacatttatggatgttcaaat 34047560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 13689978 - 13689892
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||||||||||| || |||||||||||| |||||||||  |||||  | || ||||||||||||| |||||||||||    
T  13689978 tattgctttgatttttgtgtcaatacctcatttcctttataaaattttagttgtcgtaaaaattgtcacatatatggatgttcaaat 13689892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 18737551 - 18737465
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||| |||| |||||||| || || ||||||| ||||||||||||||| |||||||| ||||||||||||| || |||||||||||    
T  18737551 tattgttttggtttttgtgacaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatacatggatgttcaaat 18737465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 31077881 - 31077951
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacat 210  Q
    ||||| |||| |||||||||||||| |||| |||||||||||||||||| |||||||| ||||||||||||    
T  31077881 tattgttttggtttttgtgtcactacctcacttcctttgtaaaattttggttgtcacaaaagttgtcacat 31077951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 277078 - 277145
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtca 207  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||||||| |||||||| || ||||||    
T  277078 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgtcacaaaaattgtca 277145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 5694135 - 5694064
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacata 211  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||| | ||||| || |||||||||||||    
T  5694135 tattgttttgatttttgtgtcaatacctcatttcctttgtaaaatttaggttgtctcaaaagttgtcacata 5694064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 4820454 - 4820540
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||||||||||| |  ||||||| ||||||||||||||||||||| || ||||| |||  || |||| |||||||||    
T  4820454 tattgctttgatttttgtgtcaatgcctcattttctttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaat 4820540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 26595436 - 26595522
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||||||||| || ||||||| ||||||||||||||| ||||  || ||||||||| ||| || |||||||||||    
T  26595436 tattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaat 26595522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 225
Target Start/End: Complemental strand, 3853291 - 3853206
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaa 225  Q
    |||||||||||||||||||||| |||||||||| ||||||||||| ||  ||||| || ||||||||| ||| ||  |||||||||    
T  3853291 tattgctttgatttttgtgtcaatatctcattttctttgtaaaatctttgttgtctcaaaagttgtcatataaatgaatgttcaaa 3853206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 5570305 - 5570255
Alignment:
Q  157 tgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtca 207  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||||||    
T  5570305 tgtcactatctcatttcctttgtaaaattttaattgtcataaaagttgtca 5570255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 11612275 - 11612361
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||| |||||||||  | || ||||||| |||||||||||||||||| ||||| || || ||||||||||| || |||||||    
T  11612275 tattgctttaatttttgtgcaaatacctcattttctttgtaaaattttgattatcacaaaaattatcacatatataaatattcaaat 11612361  T

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Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 22079547 - 22079461
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||||||||||||||| ||  |||||| ||||| ||||||||| |||||||| |||| ||||  || || |||||||||||    
T  22079547 tattgctttgatttttgtgtcaatacatcattttctttgcaaaattttggttgtcacaaaagtggtcatctaaatggatgttcaaat 22079461  T

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Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 5080551 - 5080494
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    |||||||||  |||||||||||||| ||||||||||||||||||||||| || |||||    
T  5080551 tattgctttagtttttgtgtcactacctcatttcctttgtaaaattttggttatcaca 5080494  T

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Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 8098581 - 8098524
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    |||||||||| |||||||||||||| || ||||||||| |||||||||| ||||||||    
T  8098581 tattgctttggtttttgtgtcactaccttatttcctttctaaaattttggttgtcaca 8098524  T

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Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 33603264 - 33603215
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttga 189  Q
    |||||||||||||||||||||| || ||||||| ||||||||||||||||    
T  33603264 tattgctttgatttttgtgtcaatacctcattttctttgtaaaattttga 33603215  T

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Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 11014974 - 11014890
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaa 224  Q
    ||||| ||| |||||||||||| || ||||||| |||  |||||||||||||||| || ||||| ||| ||| ||||||||||||    
T  11014974 tattgatttaatttttgtgtcaatacctcattttcttcataaaattttgattgtctcaaaagttatcatataaatagatgttcaa 11014890  T

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Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 16199548 - 16199623
Alignment:
Q  151 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||    
T  16199548 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaat 16199623  T

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Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 30423536 - 30423450
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    ||||||||||| |||||| ||| || ||||||| |||| ||||  |||||||||  || ||||| ||||||| ||||||||||||||    
T  30423536 tattgctttgaattttgtatcaatacctcattttctttataaagctttgattgtatcaaaagttatcacataaatagatgttcaaat 30423450  T

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Target: scaffold0056 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 76603 - 76517
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||| ||||    
T  76603 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttaaaat 76517  T

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Target: scaffold0199 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 8757 - 8841
Alignment:
Q  142 ttgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| |||||| | ||||||||| |||||| |||||||||||    
T  8757 ttgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcataaaagttgtcagatatatggatgttcaaat 8841  T

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Target: scaffold0098 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 49388 - 49468
Alignment:
Q  146 tttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||| |||||||||||||| ||||||||||||||||||||||| || ||||| |||||||||||||||| |||||||||||    
T  49388 tttggtttttgtgtcactacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatggatgttcaaat 49468  T

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Target: scaffold0519 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 11869 - 11955
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaat 226  Q
    |||||||||| ||||||||||| || ||||||| ||||||||||||||| | |||||| ||||||||| || |||||||||||||||    
T  11869 tattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaat 11955  T

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Target: scaffold0067 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 35610 - 35667
Alignment:
Q  140 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  35610 tattgctttggtttttgtgtcactacctcattttctttgtaaaattttgattgtcaca 35667  T

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Target: scaffold0041 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 10941 - 10890
Alignment:
Q  146 tttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 197  Q
    |||||||||||||| |||| ||||||| |||| |||||||||||||||||||    
T  10941 tttgatttttgtgttactacctcattttctttataaaattttgattgtcaca 10890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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