View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9359_high_14 (Length: 340)
Name: NF9359_high_14
Description: NF9359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9359_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 9 - 324
Target Start/End: Original strand, 33505143 - 33505458
Alignment:
| Q |
9 |
tcaataataattggagatgaagttgtataacaaacactttttgaaattgtaatatgggagatgaaatgaataggagagtattaatattacgtactgtgca |
108 |
Q |
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| T |
33505143 |
tcaataataattggagatgaagttgtataacaaacactttttgaaattataatgtgggagatgaaatgaataggagagtattaatattacgtactgtgca |
33505242 |
T |
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| Q |
109 |
catctagcaacaacatcctcagcaatggaggatagatacttgagcttcatcgccataaccgtttgtttgcagttaatttcttatttcctctcttgatctc |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33505243 |
catctagcaacaacatcctcagcaatggaggatagatacttgagcttcatcgccataaccgtttgtttgcagttaatttcttatttcctctcttgatctc |
33505342 |
T |
|
| Q |
209 |
tttgatgctaagtaatatatatgagacaccgaaagggtgatacgtgggagggattagtaggtgccacgtgttaatagccatgcaacgcaagcatgcaaca |
308 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
33505343 |
tttgatgctaagtaatatatatgagacaccgaaagggtgatacgtgggagggattagtaggtgccacgtgttaatagccatgcaatgcaagcatgcaaca |
33505442 |
T |
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| Q |
309 |
cgtacatggttatttg |
324 |
Q |
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|||||||||||||||| |
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| T |
33505443 |
cgtacatggttatttg |
33505458 |
T |
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