View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9359_low_16 (Length: 502)

Name: NF9359_low_16
Description: NF9359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9359_low_16
NF9359_low_16
[»] chr1 (49 HSPs)
chr1 (18-497)||(29333312-29333788)
chr1 (105-269)||(37156864-37157026)
chr1 (110-265)||(51162252-51162407)
chr1 (106-271)||(15631883-15632048)
chr1 (137-265)||(16708809-16708937)
chr1 (105-194)||(37148112-37148201)
chr1 (104-268)||(3116007-3116170)
chr1 (106-266)||(17628372-17628531)
chr1 (104-215)||(20169242-20169352)
chr1 (104-268)||(5243349-5243512)
chr1 (138-266)||(34265580-34265708)
chr1 (117-266)||(9572731-9572881)
chr1 (104-266)||(32497219-32497380)
chr1 (142-266)||(41196657-41196781)
chr1 (107-265)||(26435123-26435280)
chr1 (137-266)||(4068125-4068254)
chr1 (137-266)||(48819309-48819438)
chr1 (104-266)||(42363579-42363737)
chr1 (137-268)||(37329357-37329488)
chr1 (104-266)||(15235108-15235269)
chr1 (184-266)||(37712124-37712206)
chr1 (133-258)||(3069809-3069934)
chr1 (105-266)||(15791362-15791522)
chr1 (137-266)||(22593354-22593483)
chr1 (136-265)||(26988157-26988286)
chr1 (138-266)||(6337703-6337831)
chr1 (137-260)||(10082260-10082384)
chr1 (104-220)||(49971228-49971344)
chr1 (104-271)||(12256584-12256750)
chr1 (105-220)||(18327502-18327617)
chr1 (105-220)||(19284874-19284991)
chr1 (149-216)||(46263420-46263487)
chr1 (158-220)||(45179029-45179090)
chr1 (105-266)||(17814169-17814329)
chr1 (105-217)||(26946100-26946213)
chr1 (105-271)||(35275840-35276007)
chr1 (139-259)||(15515301-15515421)
chr1 (137-265)||(16888914-16889041)
chr1 (138-218)||(19220185-19220264)
chr1 (137-220)||(26542983-26543066)
chr1 (105-171)||(16225487-16225553)
chr1 (138-220)||(36259284-36259366)
chr1 (106-220)||(42591361-42591475)
chr1 (137-266)||(13038957-13039086)
chr1 (137-174)||(41003397-41003434)
chr1 (154-266)||(10365198-10365309)
chr1 (104-220)||(28122594-28122709)
chr1 (104-216)||(35282591-35282701)
chr1 (118-265)||(49738249-49738396)
[»] chr4 (37 HSPs)
chr4 (102-264)||(2702664-2702826)
chr4 (133-261)||(22397257-22397385)
chr4 (133-220)||(43983375-43983462)
chr4 (104-268)||(46175924-46176087)
chr4 (105-220)||(15184525-15184639)
chr4 (105-268)||(47202804-47202966)
chr4 (103-220)||(27368145-27368261)
chr4 (105-269)||(52700487-52700651)
chr4 (102-266)||(29877614-29877778)
chr4 (137-266)||(7148782-7148911)
chr4 (137-246)||(26206321-26206430)
chr4 (117-266)||(38345769-38345917)
chr4 (137-265)||(4603280-4603407)
chr4 (105-217)||(19725271-19725383)
chr4 (102-266)||(23297413-23297574)
chr4 (138-220)||(35010222-35010304)
chr4 (105-266)||(35405663-35405822)
chr4 (137-266)||(48591371-48591500)
chr4 (137-246)||(55638048-55638157)
chr4 (154-266)||(17222856-17222968)
chr4 (105-177)||(23284812-23284883)
chr4 (104-220)||(42617223-42617338)
chr4 (106-266)||(12495591-12495753)
chr4 (137-215)||(39932752-39932830)
chr4 (104-217)||(22303073-22303185)
chr4 (157-266)||(41228933-41229042)
chr4 (137-202)||(43415300-43415365)
chr4 (92-193)||(10796349-10796452)
chr4 (107-259)||(18424232-18424383)
chr4 (104-167)||(19414106-19414169)
chr4 (102-196)||(43699500-43699594)
chr4 (117-202)||(212959-213043)
chr4 (137-266)||(36740914-36741043)
chr4 (137-265)||(896980-897108)
chr4 (137-217)||(2141651-2141731)
chr4 (105-165)||(10794957-10795017)
chr4 (159-202)||(36298363-36298407)
[»] chr5 (46 HSPs)
chr5 (105-266)||(15413970-15414131)
chr5 (106-278)||(40415907-40416079)
chr5 (102-266)||(42851997-42852160)
chr5 (133-278)||(39990582-39990727)
chr5 (104-246)||(43318980-43319122)
chr5 (154-279)||(28357379-28357504)
chr5 (133-266)||(40152823-40152956)
chr5 (137-268)||(28625490-28625621)
chr5 (101-266)||(29922136-29922301)
chr5 (104-219)||(15122522-15122636)
chr5 (105-220)||(26002975-26003090)
chr5 (117-266)||(24030205-24030353)
chr5 (106-266)||(4728825-4728983)
chr5 (104-196)||(33757065-33757156)
chr5 (106-216)||(6025982-6026091)
chr5 (154-246)||(36206060-36206153)
chr5 (114-202)||(2502730-2502818)
chr5 (104-168)||(5203478-5203542)
chr5 (105-177)||(25332274-25332346)
chr5 (137-265)||(29418700-29418828)
chr5 (154-266)||(29659087-29659199)
chr5 (117-196)||(10537236-10537315)
chr5 (149-220)||(42808873-42808944)
chr5 (137-263)||(13060552-13060678)
chr5 (104-194)||(15709911-15710000)
chr5 (137-266)||(17657252-17657381)
chr5 (106-194)||(15363991-15364079)
chr5 (154-246)||(23087746-23087838)
chr5 (104-172)||(33667433-33667501)
chr5 (117-260)||(11991295-11991437)
chr5 (226-269)||(15364100-15364143)
chr5 (105-200)||(17128256-17128351)
chr5 (117-200)||(22573643-22573726)
chr5 (133-216)||(38461279-38461362)
chr5 (190-269)||(42478889-42478968)
chr5 (103-173)||(341966-342036)
chr5 (157-271)||(7364251-7364365)
chr5 (104-194)||(17668377-17668466)
chr5 (104-266)||(20458505-20458666)
chr5 (157-271)||(41419531-41419645)
chr5 (207-260)||(11163235-11163288)
chr5 (143-215)||(18602618-18602691)
chr5 (184-265)||(41059737-41059818)
chr5 (153-219)||(6008234-6008297)
chr5 (137-217)||(7984115-7984195)
chr5 (105-172)||(35078711-35078777)
[»] chr8 (45 HSPs)
chr8 (102-266)||(30973964-30974128)
chr8 (102-275)||(36907582-36907759)
chr8 (137-266)||(2563368-2563497)
chr8 (105-266)||(19925336-19925496)
chr8 (102-269)||(14262301-14262468)
chr8 (137-266)||(2669658-2669787)
chr8 (105-245)||(43577199-43577339)
chr8 (153-246)||(9782209-9782302)
chr8 (104-266)||(12607057-12607218)
chr8 (137-266)||(1184793-1184922)
chr8 (106-220)||(19925536-19925650)
chr8 (105-220)||(42102085-42102199)
chr8 (104-266)||(42363264-42363425)
chr8 (105-265)||(32131418-32131578)
chr8 (137-268)||(11988207-11988337)
chr8 (139-266)||(31079113-31079240)
chr8 (104-266)||(37410860-37411021)
chr8 (137-266)||(32975697-32975826)
chr8 (102-262)||(14942399-14942559)
chr8 (137-205)||(23412744-23412812)
chr8 (105-192)||(2019670-2019757)
chr8 (137-195)||(28280719-28280777)
chr8 (104-266)||(38338798-38338959)
chr8 (137-266)||(9131075-9131204)
chr8 (104-220)||(32751115-32751231)
chr8 (104-216)||(38195464-38195575)
chr8 (138-265)||(218202-218327)
chr8 (138-265)||(694762-694887)
chr8 (138-265)||(698971-699096)
chr8 (138-265)||(731825-731950)
chr8 (138-265)||(855721-855846)
chr8 (117-216)||(19327857-19327955)
chr8 (157-267)||(14724911-14725021)
chr8 (138-265)||(16926676-16926807)
chr8 (184-266)||(24350466-24350548)
chr8 (154-220)||(24866944-24867010)
chr8 (105-195)||(42666976-42667065)
chr8 (138-179)||(402122-402163)
chr8 (154-219)||(35168435-35168500)
chr8 (207-271)||(9130959-9131023)
chr8 (117-197)||(16706116-16706196)
chr8 (133-177)||(29218289-29218333)
chr8 (117-216)||(31459036-31459136)
chr8 (105-177)||(37966227-37966299)
chr8 (157-265)||(41145344-41145451)
[»] chr7 (33 HSPs)
chr7 (102-266)||(35809065-35809229)
chr7 (102-262)||(22319243-22319402)
chr7 (105-246)||(22575564-22575705)
chr7 (104-266)||(22032739-22032901)
chr7 (137-266)||(29378655-29378784)
chr7 (104-266)||(28004561-28004722)
chr7 (137-266)||(47862732-47862860)
chr7 (104-266)||(47654361-47654523)
chr7 (117-266)||(44613420-44613569)
chr7 (104-172)||(24371447-24371515)
chr7 (103-268)||(20888549-20888715)
chr7 (154-263)||(14691249-14691358)
chr7 (141-266)||(16932877-16933001)
chr7 (141-266)||(16938260-16938384)
chr7 (137-217)||(14675956-14676035)
chr7 (106-217)||(1312093-1312203)
chr7 (140-266)||(991513-991638)
chr7 (104-266)||(16958793-16958954)
chr7 (105-263)||(38372536-38372694)
chr7 (171-246)||(18251491-18251565)
chr7 (133-195)||(7098118-7098180)
chr7 (165-271)||(12473391-12473497)
chr7 (102-148)||(18837197-18837243)
chr7 (142-216)||(21027510-21027584)
chr7 (104-266)||(23137110-23137271)
chr7 (133-266)||(30094676-30094811)
chr7 (137-265)||(41094228-41094352)
chr7 (137-190)||(21249166-21249219)
chr7 (104-220)||(35246649-35246762)
chr7 (104-168)||(18260890-18260954)
chr7 (103-223)||(23119910-23120029)
chr7 (137-265)||(30181560-30181688)
chr7 (157-216)||(47582561-47582620)
[»] chr3 (36 HSPs)
chr3 (102-266)||(4974286-4974450)
chr3 (137-266)||(38524098-38524227)
chr3 (145-266)||(20174887-20175008)
chr3 (133-268)||(45049319-45049454)
chr3 (170-287)||(48816758-48816875)
chr3 (108-265)||(30383749-30383903)
chr3 (105-279)||(1516032-1516205)
chr3 (105-220)||(29614172-29614286)
chr3 (137-268)||(42956124-42956255)
chr3 (104-202)||(10448751-10448849)
chr3 (138-216)||(37456431-37456508)
chr3 (123-200)||(51662800-51662877)
chr3 (104-220)||(3645280-3645395)
chr3 (154-266)||(45331242-45331354)
chr3 (132-211)||(30473145-30473224)
chr3 (151-266)||(37243490-37243605)
chr3 (104-246)||(28741181-28741323)
chr3 (184-266)||(40240524-40240606)
chr3 (138-220)||(43971840-43971922)
chr3 (104-218)||(4257295-4257410)
chr3 (104-177)||(24841423-24841496)
chr3 (104-220)||(20894480-20894595)
chr3 (133-268)||(47403707-47403843)
chr3 (164-278)||(19307978-19308091)
chr3 (105-262)||(22809144-22809302)
chr3 (117-266)||(40581023-40581173)
chr3 (105-202)||(7292659-7292755)
chr3 (105-190)||(29830793-29830878)
chr3 (154-266)||(53787699-53787811)
chr3 (105-220)||(29270339-29270454)
chr3 (151-218)||(43376719-43376786)
chr3 (117-220)||(53218033-53218136)
chr3 (105-171)||(30499944-30500010)
chr3 (229-266)||(3845956-3845993)
chr3 (104-177)||(36266221-36266294)
chr3 (102-214)||(2086690-2086802)
[»] scaffold1088 (1 HSPs)
scaffold1088 (105-231)||(1272-1398)
[»] chr2 (27 HSPs)
chr2 (102-261)||(24438994-24439153)
chr2 (137-265)||(12238434-12238559)
chr2 (118-268)||(21788448-21788598)
chr2 (157-266)||(16108069-16108178)
chr2 (104-202)||(27881008-27881106)
chr2 (117-206)||(34913397-34913486)
chr2 (190-264)||(12950064-12950138)
chr2 (102-266)||(4026901-4027064)
chr2 (110-190)||(8441456-8441536)
chr2 (104-266)||(32366127-32366288)
chr2 (138-200)||(43796941-43797003)
chr2 (106-266)||(32521993-32522152)
chr2 (105-196)||(2757088-2757177)
chr2 (154-271)||(5516102-5516220)
chr2 (137-266)||(33321259-33321388)
chr2 (105-266)||(38216001-38216158)
chr2 (104-172)||(40301329-40301397)
chr2 (157-271)||(42064881-42064995)
chr2 (165-266)||(23956211-23956312)
chr2 (145-266)||(36501462-36501583)
chr2 (104-245)||(38471759-38471900)
chr2 (137-261)||(29774755-29774879)
chr2 (102-190)||(35515503-35515591)
chr2 (106-165)||(16108511-16108570)
chr2 (133-216)||(43787800-43787883)
chr2 (184-266)||(8832514-8832596)
chr2 (122-266)||(25836660-25836803)
[»] scaffold0004 (1 HSPs)
scaffold0004 (139-262)||(227718-227842)
[»] chr6 (31 HSPs)
chr6 (102-266)||(8010992-8011157)
chr6 (105-256)||(10619207-10619360)
chr6 (104-259)||(10184284-10184438)
chr6 (105-268)||(32615360-32615522)
chr6 (111-265)||(21609997-21610151)
chr6 (104-220)||(4808549-4808664)
chr6 (137-266)||(2034176-2034305)
chr6 (138-266)||(32165208-32165335)
chr6 (108-266)||(21891285-21891443)
chr6 (154-216)||(34413346-34413408)
chr6 (117-266)||(29623425-29623573)
chr6 (144-220)||(15054578-15054654)
chr6 (137-268)||(2255744-2255875)
chr6 (137-220)||(22816578-22816661)
chr6 (104-266)||(1468153-1468313)
chr6 (128-266)||(2027123-2027261)
chr6 (104-202)||(6632636-6632734)
chr6 (137-265)||(10755231-10755356)
chr6 (106-216)||(34223522-34223632)
chr6 (157-266)||(10874014-10874123)
chr6 (154-265)||(16589778-16589886)
chr6 (154-265)||(16605494-16605602)
chr6 (137-220)||(4272392-4272475)
chr6 (137-271)||(10054391-10054523)
chr6 (142-205)||(10730249-10730312)
chr6 (105-220)||(17914924-17915038)
chr6 (133-220)||(29052339-29052426)
chr6 (104-194)||(9894743-9894833)
chr6 (103-193)||(30533957-30534046)
chr6 (133-266)||(23239253-23239386)
chr6 (184-268)||(32675834-32675918)
[»] scaffold0332 (1 HSPs)
scaffold0332 (133-267)||(14692-14826)
[»] scaffold0512 (1 HSPs)
scaffold0512 (138-266)||(4076-4203)
[»] scaffold0157 (1 HSPs)
scaffold0157 (106-266)||(24724-24886)
[»] scaffold0012 (1 HSPs)
scaffold0012 (105-220)||(178478-178594)
[»] scaffold0006 (1 HSPs)
scaffold0006 (137-212)||(278993-279067)
[»] scaffold0041 (1 HSPs)
scaffold0041 (137-265)||(108944-109068)
[»] scaffold0048 (1 HSPs)
scaffold0048 (108-172)||(59249-59313)


Alignment Details
Target: chr1 (Bit Score: 373; Significance: 0; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 18 - 497
Target Start/End: Original strand, 29333312 - 29333788
Alignment:
Q  18 atatgtgctatgtaaactatttatttaatttagggggaaaaaatatgtacaatatagctaaattaattgaatcagtccgttt-gatggcttattttagaa 116  Q
    |||||||||||||||||||||||||||     |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  29333312 atatgtgctatgtaaactatttattta-----gggggaaaaaatatgtacaatatagctatattaattgaatcagtccgttttgatggcttattttagaa 29333406  T
Q  117 cttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaatttt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||    
T  29333407 cttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaagatagcttatgaaaaaacaacttatgaatatacaatttt 29333506  T
Q  217 cgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagttcaatccaaacgtgccctaaatattaaatacc-nnnnnnnngtcaaaca 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||    
T  29333507 cgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagttcaatccaaacgtgccctaaatattaaataccttttttcttgtcaaaca 29333606  T
Q  316 tccatgcaactaccaataacatgtacttatgggacaataaaagatcaannnnnnngttagggagaacaagcgaataacgttaatattgtcaataattgtt 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||  |||||||||||||||||||||||||    
T  29333607 tccatgcaactaccaataacatgtacttatgggacaataaaagatcaatttttttgttagggagaacaagcgatcaacgttaatattgtcaataattgtt 29333706  T
Q  416 agcattatagtgcgagcaagaatcaaaccctctacttccttatcacttccctctttatatcacctcaccccaaccaccaaac 497  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29333707 agcattatagtgcgagcaaaaatcaaaccctctacttccttatcacttccctctttatatcacctcaccccaaccaccaaac 29333788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 105 - 269
Target Start/End: Complemental strand, 37157026 - 37156864
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||| | ||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| ||||||  ||| ||||||||||  ||  ||| |    
T  37157026 cttattttaaagcttatgcaaagcagcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatgaaaaa--aacctatga 37156929  T
Q  205 atatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagttc 269  Q
    |||||||||||||| | ||| |||| |||||||||||||||| ||||||||||||||||||||||    
T  37156928 atatacaattttcgctagtaagatcttatgaattaacataaaagcttaattatttgcataagttc 37156864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 110 - 265
Target Start/End: Original strand, 51162252 - 51162407
Alignment:
Q  110 tttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatata 209  Q
    |||||| ||||||||||| ||| ||| |||||||||||| |||||||||||||||| |||||||||||  ||| |||||||||||||| |||| ||||||    
T  51162252 tttagagcttatgcaaagtagcttatgcaaataaataagcattaatgtattatttacaagtttgttaaggtagtttatgaaaaaacaacttatgaatata 51162351  T
Q  210 caattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataa 265  Q
    |||||||||||  || |||| ||| |||||||||||| | ||||||||||||||||    
T  51162352 caattttcgttaataagatcttataaattaacataaaagtttaattatttgcataa 51162407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 15631883 - 15632048
Alignment:
Q  106 ttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaa 205  Q
    |||||||||| ||||| |||| || | ||||||||||||||||| || ||||||||||||||||||||||||  ||  ||||||||||||  ||||| ||    
T  15631883 ttattttagagcttatacaaaacaacttatacaaataaataagtttttatgtattatttataagtttgttaatgtattttatgaaaaaactgtttatgaa 15631982  T
Q  206 tatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagttcaa 271  Q
     |||||||||||||| ||  || ||||| |||||| |||||  |||| |||||| |||||| ||||    
T  15631983 aatacaattttcgttagtgagagcatataaattaaaataaaaacttatttatttacataagctcaa 15632048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 265
Target Start/End: Original strand, 16708809 - 16708937
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    |||||||| || |||||||||| ||||||||| | ||||||  | | ||||||||||||||||||| |||||||||||||| || ||| |||| ||||||    
T  16708809 caaataaagaaatattaatgtactatttataaatctgttaaggttgtttatgaaaaaacaatttatgaatatacaattttcattagtaagatcttatgaa 16708908  T
Q  237 ttaacataaaggcttaattatttgcataa 265  Q
    ||||||||||   ||| ||||||||||||    
T  16708909 ttaacataaaaatttatttatttgcataa 16708937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 37148201 - 37148112
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaa 194  Q
    ||||||||| | ||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| ||||||  ||| |||||||||||    
T  37148201 cttattttaaagcttatgcaaagcagcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatgaaaaaa 37148112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 104 - 268
Target Start/End: Complemental strand, 3116170 - 3116007
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||| | |||||  ||| |||| ||| ||||||||||| | || |||| || ||||||||||| ||||  ||| |||||||||||| ||||||     
T  3116170 gcttattttatagcttatataaaacagcttatgcaaataaataaatttttatgttttgtttataagttt-ttaaggtagtttatgaaaaaaccatttatg 3116072  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagtt 268  Q
    || |||||||||||||| ||| |||| ||| |||||| ||||| ||||| |||||| ||||||||    
T  3116071 aagatacaattttcgttagtaagatcttataaattaaaataaaagcttacttatttacataagtt 3116007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 106 - 266
Target Start/End: Complemental strand, 17628531 - 17628372
Alignment:
Q  106 ttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaa 205  Q
    |||||||||| |||||  ||| |||| ||||||||||||||||| || ||||||||||||||||||| ||||  ||| ||||||||||||  ||||| ||    
T  17628531 ttattttagagcttatataaaacagcttatacaaataaataagtttttatgtattatttataagttt-ttaaggtagtttatgaaaaaaccgtttatgaa 17628433  T
Q  206 tatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
     |||||||||||||| ||  || | | | |||||| ||||| ||||| |||||| ||||||    
T  17628432 gatacaattttcgttagtgagagcttctaaattaaaataaaagcttatttatttacataag 17628372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 215
Target Start/End: Original strand, 20169242 - 20169352
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    ||||||||| || |||||| ||| |||| ||| ||||||||||||  || ||||||||||||||||||| | || |||| ||||||||||||| ||||||    
T  20169242 gcttatttt-gagcttatgaaaaacagcttatgcaaataaataagcttttatgtattatttataagtttttaaatatagtttatgaaaaaacagtttata 20169340  T
Q  204 aatatacaattt 215  Q
    ||||||||||||    
T  20169341 aatatacaattt 20169352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 268
Target Start/End: Complemental strand, 5243512 - 5243349
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||  ||| |||| ||| ||||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||||||| | |||||     
T  5243512 gcttattttagagcttatataaaacagcttatgcaaataaataagtttttgtgtattatttataagttt-ttaaggtagtttatgaaaaaatagtttatg 5243414  T
Q  204 aatatacaattttcgtt-cgtacgatcatatgaattaacataaaggcttaattatttgcataagtt 268  Q
    || |||||||||||||| || | || ||||| |||||| ||||| ||||| |||||| ||||||||    
T  5243413 aagatacaattttcgttacgga-gagcatataaattaaaataaaagcttatttatttacataagtt 5243349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 138 - 266
Target Start/End: Original strand, 34265580 - 34265708
Alignment:
Q  138 aaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaat 237  Q
    |||||||||| |||||||||||||||||||| ||||||||  ||| |||||||||||||| |||| |||| |||| ||| |||  || |||| ||| |||    
T  34265580 aaataaataaatattaatgtattatttataaatttgttaaggtagtttatgaaaaaacaacttatgaatagacaaattttgttaataagatcttataaat 34265679  T
Q  238 taacataaaggcttaattatttgcataag 266  Q
    |||||| ||  |||| ||||||| |||||    
T  34265680 taacattaaaacttatttatttgtataag 34265708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 117 - 266
Target Start/End: Complemental strand, 9572881 - 9572731
Alignment:
Q  117 cttatgcaaagcagcatatacaaataaataag-tattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattt 215  Q
    |||||||||| |||| | | |||||||||||| | || || ||||||| |||||||||||||  ||| ||||||||||||||||||| || ||| | |||    
T  9572881 cttatgcaaaacagcttttgcaaataaataagctttttatttattattcataagtttgttaaggtagtttatgaaaaaacaatttatgaagataaagttt 9572782  T
Q  216 tcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    | ||| ||  || | |||||||||| ||||| ||||| |||||||||||||    
T  9572781 ttgttagtgagaacttatgaattaatataaaagcttatttatttgcataag 9572731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 266
Target Start/End: Complemental strand, 32497380 - 32497219
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    ||||||||| || |||||  ||| |||| ||| ||||||||||||| || ||||||||||||||||||| ||||  ||| ||||||||||||| |||||     
T  32497380 gcttattttggagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataagttt-ttaaggtagtttatgaaaaaacagtttatg 32497282  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    |  |||||||||||||| ||  || | ||| |||||| ||||| | ||| |||||| ||||||    
T  32497281 aggatacaattttcgttagtgagagcttataaattaaaataaaagtttatttatttacataag 32497219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 266
Target Start/End: Complemental strand, 41196781 - 41196657
Alignment:
Q  142 aaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaac 241  Q
    |||||||| || |||||||||| ||||| |||| ||  ||| |||||||||||||  |||| || |||||||||| ||| ||  || | | |||||||||    
T  41196781 aaataagtttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagagcttgtgaattaac 41196682  T
Q  242 ataaaggcttaattatttgcataag 266  Q
    ||||||||||| |||||||||||||    
T  41196681 ataaaggcttatttatttgcataag 41196657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 265
Target Start/End: Complemental strand, 26435280 - 26435123
Alignment:
Q  107 tattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaat 206  Q
    |||||| || ||||| |||| |||| ||| ||||||||||||| ||| |||||||||| ||||||||| ||| ||| ||||||||||||  ||||| ||     
T  26435280 tatttttgagcttatacaaaacagcttatgcaaataaataagtttta-tgtattatttttaagtttgtcaaagtagtttatgaaaaaactgtttatgaag 26435182  T
Q  207 atacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataa 265  Q
    ||||| ||||||||  |  || | |||||||||||||| | |  || ||||||||||||    
T  26435181 atacatttttcgttactgagaacttatgaattaacatataagtctatttatttgcataa 26435123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 4068125 - 4068254
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||  || |||||||||| ||||| |||| ||  ||| |||||||||||||| |||| || |||| ||||||||| ||  || | ||||||    
T  4068125 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatactattttcgttagtgagaacttatgaa 4068224  T
Q  237 ttaacataaaggcttaattatttgcataag 266  Q
    |||| ||||| | ||| |||||||||||||    
T  4068225 ttaatataaaagtttatttatttgcataag 4068254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 48819309 - 48819438
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||| ||  ||||||||||||| ||||| |||| ||  ||| |||||||||||||  |||| || ||||| |||| ||| ||  || | ||||||    
T  48819309 caaataaatgagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacattttttgttagtgagaacttatgaa 48819408  T
Q  237 ttaacataaaggcttaattatttgcataag 266  Q
    |||||||||| ||||| |||||||||||||    
T  48819409 ttaacataaaagcttatttatttgcataag 48819438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 266
Target Start/End: Original strand, 42363579 - 42363737
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||||||  |||| |||||||||||||  || || |||||||||||||||| ||||||| | || | ||||||||||| || ||     
T  42363579 gcttattttagagcttatgcaagacagcttatacaaataaat--gtctttatgtattatttataagcttgttaataaagttaatgaaaaaacagttgatg 42363676  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    ||  ||| |||||||||  |  || | || ||||||| |||||| |||| |||||||||||||    
T  42363677 aaggtacgattttcgtt--tgagaacttaggaattaagataaagacttatttatttgcataag 42363737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 37329488 - 37329357
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||| ||  || |||||||||| ||||  |||| ||  ||| |||||||||||||  |||| || |||||||||||||| ||  || | ||| ||    
T  37329488 caaataaatgagcttttatgtattattcataaacttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttggtgagaacttataaa 37329389  T
Q  237 ttaacataaaggcttaattatttgcataagtt 268  Q
    |||||||||| ||||| |||||||||||||||    
T  37329388 ttaacataaaagcttatttatttgcataagtt 37329357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 266
Target Start/End: Complemental strand, 15235269 - 15235108
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    ||||||||||||||| ||  |||  ||| |||  |||||||||||| || ||||||||||||||||||| |||| | || ||||||||||||  |||||     
T  15235269 gcttattttagaactaatataaaatagcttatgtaaataaataagtttttatgtattatttataagttt-ttaagacagtttatgaaaaaacggtttatg 15235171  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    || | || ||||||||| ||| || | ||| |||||| |||||  |||| |||||| ||||||    
T  15235170 aagaaaccattttcgttagtaagagcttataaattaaaataaaaacttatttatttacataag 15235108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 37712124 - 37712206
Alignment:
Q  184 ttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    |||||||||||||| |||| || |||||| ||||||| ||| || | |||||||||||||||| | ||| |||||||||||||    
T  37712124 ttatgaaaaaacaacttatgaagatacaactttcgttagtaagaacttatgaattaacataaaagtttatttatttgcataag 37712206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 258
Target Start/End: Complemental strand, 3069934 - 3069809
Alignment:
Q  133 tatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcata 232  Q
    ||||||||||| ||||  ||||||||||||| ||||| |||| ||  ||| |||||||||||||  |||| || |||||||||||  | ||  || | ||    
T  3069934 tatacaaataagtaagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcactagtgagaactta 3069835  T
Q  233 tgaattaacataaaggcttaattatt 258  Q
    |||||||||||||| ||||| |||||    
T  3069834 tgaattaacataaaagcttatttatt 3069809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 15791362 - 15791522
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||||| |||||  ||| |||| |||  |||||||||||| || ||||||||||||||||||| ||||  ||| |||||||||||   || || |    
T  15791362 cttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataagttt-ttaaggtagtttatgaaaaaatcgttaatga 15791460  T
Q  205 atatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    | ||||||||||||||  |  || | ||| |||||| ||||| ||||| |||||| ||||||    
T  15791461 agatacaattttcgttaatgagagcttataaattaaaataaaagcttatttatttacataag 15791522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 266
Target Start/End: Complemental strand, 22593483 - 22593354
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||| | || |||||||||| ||||| |||| ||   || ||| |||||| || |||||||| |||||||||| ||| ||  || | ||| ||    
T  22593483 caaataaataaatttttatgtattattcataagcttgtaaatgcagtttacgaaaaatcactttataaagatacaatttttgttagtgagaacttataaa 22593384  T
Q  237 ttaacataaaggcttaattatttgcataag 266  Q
    |||||||||| ||||| |||||||||||||    
T  22593383 ttaacataaaagcttatttatttgcataag 22593354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 265
Target Start/End: Original strand, 26988157 - 26988286
Alignment:
Q  136 acaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatga 235  Q
    |||||||||||||  || |||| ||||| ||||| |||| ||  ||| |||||||||||||  |||| || |||||||| ||||| |||  | | |||||    
T  26988157 acaaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattgtcgttagtaaaaacttatga 26988256  T
Q  236 attaacataaaggcttaattatttgcataa 265  Q
    ||||||||||| ||| | ||||||||||||    
T  26988257 attaacataaaagctaatttatttgcataa 26988286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 266
Target Start/End: Complemental strand, 6337831 - 6337703
Alignment:
Q  138 aaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaat 237  Q
    |||||||||||  || |||||||||| ||||| |||| ||  ||| |||||||||||||  |||| || |||||||||| ||| |   || | |||||||    
T  6337831 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagcgagaacttatgaat 6337732  T
Q  238 taacataaaggcttaattatttgcataag 266  Q
    ||||||||| ||||| || ||||||||||    
T  6337731 taacataaaagcttatttgtttgcataag 6337703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 260
Target Start/End: Original strand, 10082260 - 10082384
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatg-aaaaaacaatttataaatatacaattttcgttcgtacgatcatatga 235  Q
    ||||||||||||| || |||| ||||| |||||||||| ||  ||| ||||| ||||||||| |||| || ||||| |||| ||||||  || | |||||    
T  10082260 caaataaataagtttttatgtgttattgataagtttgtcaaggtagtttatgaaaaaaacaacttatgaaaatacatttttggttcgtgagaacttatga 10082359  T
Q  236 attaacataaaggcttaattatttg 260  Q
    ||||| ||||| ||||| |||||||    
T  10082360 attaatataaaagcttatttatttg 10082384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 49971228 - 49971344
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||||||| || | ||| ||||||||||    || || ||||||||||||| |||||||  ||| |||||||||||||  |||      
T  49971228 gcttattttagagcttatgcaaaacaacttatgcaaataaatattcctttatttattatttataagcttgttaatgtagtttatgaaaaaacagcttacg 49971327  T
Q  204 aatatacaattttcgtt 220  Q
    || ||||||||||||||    
T  49971328 aagatacaattttcgtt 49971344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 104 - 271
Target Start/End: Original strand, 12256584 - 12256750
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||||||| || | |||  |||||| || |  || || ||||||||||||| ||||| |  ||| ||||||||| |||||||||     
T  12256584 gcttattttagagcttatgcaaaacaacttatgtaaataattatgcttttatatattatttataagattgttgatgtagtttatgaaaa-acaatttatg 12256682  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagttcaa 271  Q
    ||  ||||||||||||| ||| || | |||||||||| |||||   ||| ||||||| ||||| ||||    
T  12256683 aaggtacaattttcgttagtaagaacttatgaattaaaataaaaatttatttatttgtataagctcaa 12256750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 18327502 - 18327617
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    |||||||| ||| |||| |||| |||| ||| ||||||||||||  || |||||||| | ||||| |||| || |||| |||||||||||||  |||| |    
T  18327502 cttattttggaatttattcaaaacagcttatgcaaataaataagcttttatgtattactcataagcttgtcaagatagtttatgaaaaaacagcttatga 18327601  T
Q  205 atatacaattttcgtt 220  Q
    | | ||||||||||||    
T  18327602 acacacaattttcgtt 18327617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 19284874 - 19284991
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataag-tattaatgtattatttataagtttgttaaaatagcttat--gaaaaaacaattta 201  Q
    |||| |||||| |||||  ||| |||| |||| ||||||||||| |||| |||||||||||||||||||||||| |||  ||||   |||||||| ||||    
T  19284874 cttactttagagcttatataaaacagcttatataaataaataagctatt-atgtattatttataagtttgttaagatattttataaaaaaaaacagttta 19284972  T
Q  202 taaatatacaattttcgtt 220  Q
    | || ||||||||||||||    
T  19284973 tgaagatacaattttcgtt 19284991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 46263420 - 46263487
Alignment:
Q  149 tattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaatttt 216  Q
    |||||||||||||||||||| |||||||   ||  |||||||||||||| |||| |||||||||||||    
T  46263420 tattaatgtattatttataaatttgttaggttaatttatgaaaaaacaacttatgaatatacaatttt 46263487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 45179090 - 45179029
Alignment:
Q  158 attatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgtt 220  Q
    ||||||||||| ||| ||||| ||| ||||||||||| || ||||||||||||||||||||||    
T  45179090 attatttataaatttattaaa-tagtttatgaaaaaataacttataaatatacaattttcgtt 45179029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 17814169 - 17814329
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||||| |||||  ||| |||| ||| ||||||||||  | || ||||||||||||||||||| ||||  ||| |||||||||||    |||| |    
T  17814169 cttattttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttataagttt-ttaaggtagtttatgaaaaaatgggttatga 17814267  T
Q  205 atatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    | |||||||||||||| ||  || | |||  ||||| ||||| ||||| |||||| ||||||    
T  17814268 aaatacaattttcgttagtcagaacttatagattaaaataaaagcttatttatttacataag 17814329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 26946213 - 26946100
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataag-tattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||| || |||||||||| | || |||  ||||||||||| | || |||| ||||| ||||| |||||||  ||| |||||||||||||| ||||     
T  26946213 cttatttttgagcttatgcaaaacggcttatgtaaataaataagctttttatgtgttattcataagcttgttaaggtagtttatgaaaaaacaacttatg 26946114  T
Q  204 aatatacaattttc 217  Q
    || |||||||||||    
T  26946113 aagatacaattttc 26946100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 105 - 271
Target Start/End: Complemental strand, 35276007 - 35275840
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataa--gtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttat 202  Q
    ||||||||||| |||||  ||| |||| |||||||||||||||   | || |||||||||||||||| || ||||  ||| |||||||||| |  ||||     
T  35276007 cttattttagagcttatataaaacagcttatacaaataaataaatttttttatgtattatttataagatt-ttaaggtagtttatgaaaaacctgtttag 35275909  T
Q  203 aaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagttcaa 271  Q
     ||||||||||||||||| ||  |||  ||| |||||| ||||| | ||| |||||| |||||| ||||    
T  35275908 gaatatacaattttcgttagtgagattttataaattaaaataaaagtttatttatttacataagctcaa 35275840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 15515421 - 15515301
Alignment:
Q  139 aataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaatt 238  Q
    ||||||||||  || |||||||||| ||||| |||| ||  ||| ||||||||||| |  |||| || |||||||||||||| ||  || | ||||||||    
T  15515421 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaagagcttatgaagatacaattttcgttagtgagaacttatgaatt 15515322  T
Q  239 aacataaaggcttaattattt 259  Q
    ||||| || ||||| ||||||    
T  15515321 aacatgaaagcttatttattt 15515301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 265
Target Start/End: Complemental strand, 16889041 - 16888914
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||  || |||||||||| ||||| |||| ||  ||| |||||||||||||  |||| || ||||||||||| || ||  ||   |||||     
T  16889041 caaataaataagcttttatgtattattcataagcttgt-aaggtagtttatgaaaaaacagcttatgaagatacaattttcattagtgagaatttatgac 16888943  T
Q  237 ttaacataaaggcttaattatttgcataa 265  Q
    |||||||||| ||||| ||||||||||||    
T  16888942 ttaacataaaagcttatttatttgcataa 16888914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 19220185 - 19220264
Alignment:
Q  138 aaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcg 218  Q
    |||||||||||| || |||||||||||||| |||| ||||  ||| |||||||||||| |||||| || || |||||||||    
T  19220185 aaataaataagtttttatgtattatttataggttt-ttaaggtagtttatgaaaaaactatttatgaagatgcaattttcg 19220264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 26542983 - 26543066
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgtt 220  Q
    |||||||||| |  || ||||||||| ||||||||||||||  ||| |||||||||||||| |||  ||  |||||||||||||    
T  26542983 caaataaatatgcttttatgtattatatataagtttgttaatgtagtttatgaaaaaacaacttaagaaagtacaattttcgtt 26543066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 16225487 - 16225553
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtt 171  Q
    ||||||||||| |||||||||| |||  |||  |||||||||||| || |||||||| |||||||||    
T  16225487 cttattttagagcttatgcaaaacagtttatgtaaataaataagtttttatgtattaattataagtt 16225553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 220
Target Start/End: Complemental strand, 36259366 - 36259284
Alignment:
Q  138 aaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgtt 220  Q
    |||||||||| | || ||||||||||  ||| ||||| |   ||| ||||||||||||| |||||||| ||||||||||||||    
T  36259366 aaataaataaatttttatgtattattcttaactttgtaagtgtagtttatgaaaaaacagtttataaacatacaattttcgtt 36259284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 220
Target Start/End: Original strand, 42591361 - 42591475
Alignment:
Q  106 ttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaa 205  Q
    |||||||| | ||||| |||| |||| | ||||| ||||||||  || |  |||||||||||||||||||||  ||  ||||||||||| | ||||| ||    
T  42591361 ttattttaaagcttatacaaaacagcttgtacaagtaaataagcttttacatattatttataagtttgttaaggtattttatgaaaaaatagtttatgaa 42591460  T
Q  206 tatacaattttcgtt 220  Q
     ||||| ||||||||    
T  42591461 gatacacttttcgtt 42591475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 13038957 - 13039086
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||  || || ||||||| || || |||||||  ||| |||||||||||||| |||| || ||| | |||||||| ||  ||   ||||||    
T  13038957 caaataaataagcttttatatattattcatgagcttgttaaggtagtttatgaaaaaacaacttatgaagataaagttttcgttagtgagaagttatgaa 13039056  T
Q  237 ttaacataaaggcttaattatttgcataag 266  Q
    |||| ||||| | ||| |||||||||||||    
T  13039057 ttaatataaaagtttatttatttgcataag 13039086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 41003397 - 41003434
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgt 174  Q
    ||||||||||||| || |||||||||||||||||||||    
T  41003397 caaataaataagtttttatgtattatttataagtttgt 41003434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 266
Target Start/End: Original strand, 10365198 - 10365309
Alignment:
Q  154 atgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaa 253  Q
    |||||||||| ||||| |||| ||| ||| |||||||||| |||   || ||||||||||||||||| |||  | | | | |||||||||||| |||||     
T  10365198 atgtattattaataagcttgtcaaagtagtttatgaaaaa-caaccgatgaatatacaattttcgttagtaaaaacttttaaattaacataaaagcttat 10365296  T
Q  254 ttatttgcataag 266  Q
    | |||||||||||    
T  10365297 tcatttgcataag 10365309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 28122594 - 28122709
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    ||||||||| ||| ||||||||| |||| ||| ||||||||| ||  || || ||||||| || || || ||||  ||| ||||||||||| || |||||    
T  28122594 gcttatttt-gaatttatgcaaatcagcttatgcaaataaattagcttttatttattattcatgagcttcttaaggtagtttatgaaaaaataacttata 28122692  T
Q  204 aatatacaattttcgtt 220  Q
    || ||| ||||||||||    
T  28122693 aagataaaattttcgtt 28122709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 216
Target Start/End: Complemental strand, 35282701 - 35282591
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    ||||||||| |||||| |||||| |||| ||| ||||||||||||  || || ||||||||||||   ||||||  ||| |||||||||||||| ||||     
T  35282701 gcttatttt-gaactt-tgcaaaacagcttatgcaaataaataagcgtttatttattatttataaacatgttaaggtagtttatgaaaaaacaacttatg 35282604  T
Q  204 aatatacaatttt 216  Q
    || ||| ||||||    
T  35282603 aagataaaatttt 35282591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 265
Target Start/End: Complemental strand, 49738396 - 49738249
Alignment:
Q  118 ttatgcaaagcagcatatacaaataaataa-gtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaatttt 216  Q
    ||||||||| || |||||  ||||||| || || || ||| |||||| |||||||||| ||||||| || | |||||| ||||||| || ||||||||||    
T  49738396 ttatgcaaaacaacatatgaaaataaaaaaagtttttatgaattattcataagtttgtcaaaatagtttgttaaaaaa-aatttatgaaaatacaatttt 49738298  T
Q  217 cgttcgtacgatcatatgaattaacataaaggcttaattatttgcataa 265  Q
    |||| ||  || | |||||||||| ||| | |||||  || ||||||||    
T  49738297 cgttagtgagaacttatgaattaatatagaagcttacatacttgcataa 49738249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 3e-46; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 102 - 264
Target Start/End: Complemental strand, 2702826 - 2702664
Alignment:
Q  102 tggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattta 201  Q
    |||||||||||||| ||||||||||||||| ||| || |||||||||||||| |||||||||||||||||||||||  ||| | ||||||| |||| |||    
T  2702826 tggcttattttagagcttatgcaaagcagcttatgcacataaataagtattagtgtattatttataagtttgttaaggtagttaatgaaaagacaactta 2702727  T
Q  202 taaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcata 264  Q
    | |||||||||||||| || ||| |||| |||||||||||||||| |||||||||||||||||    
T  2702726 tgaatatacaattttcattagtaagatcttatgaattaacataaaagcttaattatttgcata 2702664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 133 - 261
Target Start/End: Complemental strand, 22397385 - 22397257
Alignment:
Q  133 tatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcata 232  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||  ||| |||||||||||||| |||| ||||||||||||||||| ||| |||| ||    
T  22397385 tatacaaataaataaatattaatgtattatttataagtctgttaaggtagtttatgaaaaaacaacttatgaatatacaattttcgttagtaagatctta 22397286  T
Q  233 tgaattaacataaaggcttaattatttgc 261  Q
    ||||||||| |||| ||||||||||||||    
T  22397285 tgaattaacttaaaagcttaattatttgc 22397257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 43983462 - 43983375
Alignment:
Q  133 tatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgtt 220  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| |||| |||| ||||||||| ||||||| ||||||||||||||    
T  43983462 tatacaaataaataagcattaatgtattatttataagcttgttaagatagtttataaaaaaacaacttataaacatacaattttcgtt 43983375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 104 - 268
Target Start/End: Complemental strand, 46176087 - 46175924
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||  ||| |||| ||| ||||||||||||| || ||||||||||||||| ||| ||||  ||| ||||||||||| | |||||     
T  46176087 gcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataaattt-ttaaggtagtttatgaaaaaatagtttatg 46175989  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagtt 268  Q
    || |||||||||||| | ||| || | ||| |||||| ||||| ||||| |||||| ||||||||    
T  46175988 aagatacaattttcgctagtaagagcttataaattaaaataaatgcttatttatttacataagtt 46175924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 15184525 - 15184639
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||||| |||||  ||| |||| |||  |||||||||||| || ||||||||||||||| ||| ||||| ||| ||||||||||||| ||||| |    
T  15184525 cttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataa-ttttttaaagtagtttatgaaaaaacagtttatga 15184623  T
Q  205 atatacaattttcgtt 220  Q
    | ||||||||||||||    
T  15184624 agatacaattttcgtt 15184639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 268
Target Start/End: Original strand, 47202804 - 47202966
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||| | |||||  ||| |||| ||| ||||||||||||| || |||||||| |||||| ||| ||||  ||| |||||||||||| |||||| |    
T  47202804 cttattttatagcttatataaaacagcttatgcaaataaataagtttttatgtattacttataaattt-ttaaggtagtttatgaaaaaaccatttatga 47202902  T
Q  205 atatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagtt 268  Q
    | |||||||||||||| ||  |||| ||| |||||| ||||| ||||| ||||||  |||||||    
T  47202903 agatacaattttcgttagtgagatcttataaattaaaataaaagcttacttatttatataagtt 47202966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 103 - 220
Target Start/End: Complemental strand, 27368261 - 27368145
Alignment:
Q  103 ggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttat 202  Q
    |||||||||| ||||||||| ||| || | ||| ||||||||||||  || || ||||||| |||||||||| ||  ||||||||||||||||| |||||    
T  27368261 ggcttatttt-gaacttatgtaaaacaacttatgcaaataaataagcttttatatattattcataagtttgtcaatgtagcttatgaaaaaacagtttat 27368163  T
Q  203 aaatatacaattttcgtt 220  Q
    ||| |||||||| |||||    
T  27368162 aaagatacaattatcgtt 27368145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 105 - 269
Target Start/End: Complemental strand, 52700651 - 52700487
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||||| |||||||||| || | |||  |||||||||||| || |||||||||||||||| |||| ||| | | ||||||||||| | ||||| |    
T  52700651 cttattttagagcttatgcaaa-caacttatgtaaataaataagtctttatgtattatttataagcttgtaaaagtggtttatgaaaaaatagtttatga 52700553  T
Q  205 atatacaattttcgttcgtacgatcatat-gaattaacataaaggcttaattatttgcataagttc 269  Q
    | |||| ||||||||| ||| || | |||  |||||||||||| | ||| |||||| |||||||||    
T  52700552 agatacgattttcgttagtaagaacttataaaattaacataaaagattatttatttacataagttc 52700487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 266
Target Start/End: Original strand, 29877614 - 29877778
Alignment:
Q  102 tggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattta 201  Q
    ||||||||||| || |||||||||| ||   ||| ||||||||||||  || |||||||||| ||||| ||| |||  ||| |||||||||| ||  |||    
T  29877614 tggcttatttttgagcttatgcaaaacaatttatgcaaataaataagcttttatgtattattcataagcttgctaaggtagtttatgaaaaagcagctta 29877713  T
Q  202 taaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    | || |||||||||| ||| ||  || | |||||||||||||||| |||||  ||||||||||||    
T  29877714 tgaagatacaatttttgttagtgagaacttatgaattaacataaaagcttatatatttgcataag 29877778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 7148782 - 7148911
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||  || |||||||||| ||||| |||| ||  ||| || ||||||||||  ||||||| ||||||||||| || ||  || | ||||||    
T  7148782 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttttgaaaaaacagcttataaaaatacaattttctttagtcagaacttatgaa 7148881  T
Q  237 ttaacataaaggcttaattatttgcataag 266  Q
    ||| |||||| ||||| |||||||||||||    
T  7148882 ttagcataaaagcttatttatttgcataag 7148911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 26206430 - 26206321
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    |||||||||| || || |||||||||||||||| |||||||  ||| ||||||||||||| ||||| ||| ||| ||||||||| ||| || | ||| ||    
T  26206430 caaataaatatgtctttatgtattatttataagattgttaacgtagtttatgaaaaaacagtttatgaatgtactattttcgttagtaagaacttataaa 26206331  T
Q  237 ttaacataaa 246  Q
    |||| |||||    
T  26206330 ttaaaataaa 26206321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 266
Target Start/End: Complemental strand, 38345917 - 38345769
Alignment:
Q  117 cttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaatttt 216  Q
    |||||||||| |||| ||| ||||||||||||  || ||||| |||| ||||| |||| ||| ||| |||||||||||||| |||| || ||||||||||    
T  38345917 cttatgcaaaacagcttatccaaataaataagcttttatgtagtattcataag-ttgtcaaagtagtttatgaaaaaacaacttatgaagatacaatttt 38345819  T
Q  217 cgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
      || |   || | |||||||||||||||| ||||| |||||| ||||||    
T  38345818 tattagccagaacttatgaattaacataaaagcttatttatttacataag 38345769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 137 - 265
Target Start/End: Complemental strand, 4603407 - 4603280
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||| || ||||||||||||||| ||| ||||  ||| ||||||||||||| ||||| || |||||||||||||| ||  ||   ||| ||    
T  4603407 caaataaataagtttttatgtattatttataatttt-ttaaggtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgagagtttataaa 4603309  T
Q  237 ttaacataaaggcttaattatttgcataa 265  Q
    |||| ||||| ||||| |||||| |||||    
T  4603308 ttaaaataaaagcttatttatttacataa 4603280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 105 - 217
Target Start/End: Original strand, 19725271 - 19725383
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||||| ||||| |||| |||| ||| ||| |||||| || || ||||||||||||||||||||||||  ||  ||||||||||||| | ||| |    
T  19725271 cttattttagagcttatacaaaacagcttatgcaattaaatacgtttttatgtattatttataagtttgttaaggtattttatgaaaaaacagtctatga 19725370  T
Q  205 atatacaattttc 217  Q
    | ||| |||||||    
T  19725371 agatataattttc 19725383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 102 - 266
Target Start/End: Original strand, 23297413 - 23297574
Alignment:
Q  102 tggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattta 201  Q
    ||||||||||| || ||||||||||  ||| ||| ||||||||||||  || |||||||||| |||||||||| ||  ||| |||||   |||||  |||    
T  23297413 tggcttatttttgagcttatgcaaaatagcttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttatg---aaacagctta 23297509  T
Q  202 taaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    | || |||||||||| ||| |   || | ||||||||| |||||| ||||| |||||||||||||    
T  23297510 tgaagatacaatttttgttagcgagaacttatgaattagcataaaagcttatttatttgcataag 23297574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 138 - 220
Target Start/End: Original strand, 35010222 - 35010304
Alignment:
Q  138 aaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgtt 220  Q
    |||||||||||| || ||||||||||||||||||||| ||  ||| |||||| |||| | |||||||| |||||| |||||||    
T  35010222 aaataaataagtttttatgtattatttataagtttgtcaacgtagtttatgataaaatagtttataaagatacaagtttcgtt 35010304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 35405663 - 35405822
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    |||||||| || |||||||||| || | ||||||||||| |||| ||| |||||||||   |||  |||| || | || |||||||||||||  |||| |    
T  35405663 cttatttttgagcttatgcaaaacaacttatacaaataactaag-atttatgtattatacttaatcttgtcaagacagtttatgaaaaaacagcttatga 35405761  T
Q  205 atatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    | ||| |||||||||| ||| || | ||| |||||||||||| ||||| |||||||||||||    
T  35405762 agatagaattttcgttagtaagacc-tattaattaacataaaagcttatttatttgcataag 35405822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 266
Target Start/End: Complemental strand, 48591500 - 48591371
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||| || || ||||||| ||| | |||| ||  ||| |||||||||||||  |||| || ||||||||||||||  |  || | ||||||    
T  48591500 caaataaataagtttttatatattattcatacgcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttaatgagaacttatgaa 48591401  T
Q  237 ttaacataaaggcttaattatttgcataag 266  Q
    ||||| |||| ||||| |||||||||||||    
T  48591400 ttaacgtaaaagcttatttatttgcataag 48591371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 55638157 - 55638048
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    |||||||| |||  || |||||||||| |||||||||| || |||| ||||||||||||| |||||||| ||||||| | |||| ||  || | ||| ||    
T  55638157 caaataaacaagcttttatgtattattcataagtttgtaaatatagtttatgaaaaaacagtttataaagatacaatctccgttagtgagaacttataaa 55638058  T
Q  237 ttaacataaa 246  Q
    ||||||||||    
T  55638057 ttaacataaa 55638048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 266
Target Start/End: Original strand, 17222856 - 17222968
Alignment:
Q  154 atgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaa 253  Q
    |||||||||| ||||| |||| ||  ||| |||||||||||||  |||| || |||||||||||||| ||  || | ||||||||||||||||  ||||     
T  17222856 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagattatgaagatacaattttcgttagttagaacttatgaattaacataaaaacttat 17222955  T
Q  254 ttatttgcataag 266  Q
    ||||||| |||||    
T  17222956 ttatttgaataag 17222968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 23284883 - 23284812
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaa 177  Q
    ||||||||||| ||| | ||||||| | ||||||||||||||| | ||| |||||||||||||||||||||||    
T  23284883 cttattttagagcttctacaaagcatcttatacaaataaataaatttta-tgtattatttataagtttgttaa 23284812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 42617338 - 42617223
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| ||||| |||| |||| ||| |||||||||| || || | ||||||||||||||||| ||||  ||| ||||||||||| | |||||     
T  42617338 gcttattttagagcttatacaaaacagcttatgcaaataaatacgtttttaagtattatttataagttt-ttaaggtagtttatgaaaaaatagtttatg 42617240  T
Q  204 aatatacaattttcgtt 220  Q
    || |||  |||||||||    
T  42617239 aagatatgattttcgtt 42617223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 106 - 266
Target Start/End: Complemental strand, 12495753 - 12495591
Alignment:
Q  106 ttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaa--tagcttatgaaaaaacaatttata 203  Q
    |||||||| | |||| ||||| |||| ||| ||||||||||||  || |||||||||| ||||| |||| ||||  ||| |||||||||||||  | ||     
T  12495753 ttattttatagcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatc 12495654  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    || ||||||| ||| || ||  || | ||| ||||||||||||  |||| |||||||||||||    
T  12495653 aagatacaatattcattagtgagaacttataaattaacataaaaacttatttatttgcataag 12495591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 39932830 - 39932752
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattt 215  Q
    |||||||||||   || |||||||||||||||| |||||||  |||  |||||||||||||||||| || |||||||||    
T  39932830 caaataaataaacttttatgtattatttataagattgttaaggtagtgtatgaaaaaacaatttatgaagatacaattt 39932752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 22303073 - 22303185
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| ||| |  ||| |||  ||| ||||||||||||| || ||||||||||||||| ||| || |  ||| |||||||||||| ||||||     
T  22303073 gcttattttagagcttttataaaacagtttatgcaaataaataagtttttatgtattatttataaattt-tttacgtagtttatgaaaaaaccatttatg 22303171  T
Q  204 aatatacaattttc 217  Q
    || |||||||||||    
T  22303172 aagatacaattttc 22303185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 157 - 266
Target Start/End: Original strand, 41228933 - 41229042
Alignment:
Q  157 tattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaatta 256  Q
    ||||||| ||||| |||||||  ||| |||||||||||||| | || || ||||||||||| || ||  || | |||||||||| ||||| ||| | |||    
T  41228933 tattattcataagcttgttaaggtagtttatgaaaaaacaactgatgaagatacaattttcattagttagaacttatgaattaatataaaagctaattta 41229032  T
Q  257 tttgcataag 266  Q
    ||||||||||    
T  41229033 tttgcataag 41229042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 43415365 - 43415300
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttat 202  Q
    ||||||||||||| || |||||||||| ||||| |||||||  ||| ||| |||||||||||||||    
T  43415365 caaataaataagtttttatgtattattcataaggttgttaatgtagtttacgaaaaaacaatttat 43415300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 193
Target Start/End: Original strand, 10796349 - 10796452
Alignment:
Q  92 gtccgtttga--tggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatga 189  Q
    ||||||||||  |||||||||||||| |||||||||| || | | |  |||||||||||| || |||||||||||| ||| | ||||| || | ||||||    
T  10796349 gtccgtttgaattggcttattttagagcttatgcaaaacaacttgtgtaaataaataagtttttatgtattatttaaaagctcgttaagatggtttatga 10796448  T
Q  190 aaaa 193  Q
    ||||    
T  10796449 aaaa 10796452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 259
Target Start/End: Complemental strand, 18424383 - 18424232
Alignment:
Q  107 tattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaat 206  Q
    |||||| || |||||||||| ||   ||||||||||||||||  || |||||||||| ||||  |||| ||  ||| ||||| ||||||||||||| ||     
T  18424383 tatttttgagcttatgcaaaacaatttatacaaataaataagcttttatgtattattcataaacttgtgaaggtagtttatg-aaaaacaatttatgaag 18424285  T
Q  207 atacaattttcgttcgtacgatcatatgaattaacataaaggcttaattattt 259  Q
    |||||||||| |||  |   | | |||||||||||||||| ||||| ||||||    
T  18424284 atacaatttttgttattgaaaacttatgaattaacataaaagcttatttattt 18424232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 19414106 - 19414169
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttata 167  Q
    |||||||||||| |||||  ||| |||| ||| ||||||||||||| || ||||||||||||||    
T  19414106 gcttattttagagcttatagaaaacagcttatgcaaataaataagtttttatgtattatttata 19414169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 43699594 - 43699500
Alignment:
Q  102 tggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaaca 196  Q
    ||||||||||| || |||||| ||| || | ||||||||||||||||  || |||| ||||| ||||| |||| ||  ||| |||||||||||||    
T  43699594 tggcttatttttgagcttatgaaaaacaacttatacaaataaataagcttttatgtcttattcataagcttgtcaatgtagtttatgaaaaaaca 43699500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 213043 - 212959
Alignment:
Q  117 cttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttat 202  Q
    |||||||||| || | ||| ||||||||||||| ||| | ||||||| ||||| |||||||  ||| |||||||||||||| ||||    
T  213043 cttatgcaaaacaacttatgcaaataaataagttttatt-tattattcataagcttgttaaggtagtttatgaaaaaacaacttat 212959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 36740914 - 36741043
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||  || || ||||||  ||||| |||| ||| ||| ||||||||| ||| || || || ||||||||||| || ||  || | ||||||    
T  36740914 caaataaataagcttttatatattatgcataagcttgtcaaagtagtttatgaaaatacagttcatgaagatacaattttcattagtgagaacttatgaa 36741013  T
Q  237 ttaacataaaggcttaattatttgcataag 266  Q
    | |||| ||| ||||| |||||||||||||    
T  36741014 tcaacacaaaagcttatttatttgcataag 36741043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 265
Target Start/End: Original strand, 896980 - 897108
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    |||||||||||   || |||||||||| ||||| |||| ||  ||| ||||||||||||||||||   | |||| ||||||||| ||   | | ||| ||    
T  896980 caaataaataaacttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacaatttacgtagatacgattttcgttagtgaaaacttataaa 897079  T
Q  237 ttaacataaaggcttaattatttgcataa 265  Q
    |||| ||||| ||||| ||||||||||||    
T  897080 ttaatataaaagcttatttatttgcataa 897108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 2141651 - 2141731
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttc 217  Q
    ||||||||||||  || |||| |||||||||| ||||||||  ||  |||| |||||||| ||||| || |||||||||||    
T  2141651 caaataaataagcttttatgtgttatttataactttgttaaggtatattataaaaaaacagtttatgaagatacaattttc 2141731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 10795017 - 10794957
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattattta 165  Q
    ||||||||||| |||||||||| |||| | |  |||||||||||| || ||||||||||||    
T  10795017 cttattttagagcttatgcaaaacagcttgtgtaaataaataagtttttatgtattattta 10794957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 36298363 - 36298407
Alignment:
Q  159 ttatttataagtttgttaaaatagcttat-gaaaaaacaatttat 202  Q
    |||||||||| ||||||||||||| |||| |||||||||||||||    
T  36298363 ttatttataactttgttaaaatagtttatggaaaaaacaatttat 36298407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 3e-43; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 15413970 - 15414131
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||||| |||||||||| |||| ||| ||||||||||||||||||||||||||| |||||||||||||  ||| |||  ||||||||| |||| |    
T  15413970 cttattttagagcttatgcaaaacagcttatgcaaataaataagtattaatgtattattgataagtttgttaaggtagtttactaaaaaacaacttatga 15414069  T
Q  205 atatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    |||||||||||| ||| ||| |||| |||||||||||||||| ||||||||||| |||||||    
T  15414070 atatacaatttttgttagtaagatcttatgaattaacataaaagcttaattattcgcataag 15414131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 106 - 278
Target Start/End: Complemental strand, 40416079 - 40415907
Alignment:
Q  106 ttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaa 205  Q
    ||||| |||| |||||||||| || | ||| ||||||| |||  ||||||||||||||||||||||||||||  ||| | |||||||||||| |||  ||    
T  40416079 ttattatagagcttatgcaaaacaacttatgcaaataactaaacattaatgtattatttataagtttgttaaggtagttcatgaaaaaacaacttaagaa 40415980  T
Q  206 tatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagttcaatccaaac 278  Q
    ||||||||||| ||| ||| |||| |||||||||| ||||| | |||||||||| | |||| |||||||||||    
T  40415979 tatacaatttttgtttgtaagatcttatgaattaagataaaagtttaattatttacgtaagctcaatccaaac 40415907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 102 - 266
Target Start/End: Original strand, 42851997 - 42852160
Alignment:
Q  102 tggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattta 201  Q
    ||||||||||| |  |||||||||| |||| ||| ||||||||||||  || |||||||||| ||||| |||| || |||| |||||||||||||| |||    
T  42851997 tggcttatttttgggcttatgcaaaacagcttattcaaataaataagcttttatgtattattcataagcttgtcaagatagtttatgaaaaaacaactta 42852096  T
Q  202 taaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    |||| |||||||||||||| ||  || | |||||||||||||||| ||||| ||| |||||||||    
T  42852097 taaa-atacaattttcgttagtgagaacttatgaattaacataaaagcttatttagttgcataag 42852160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 133 - 278
Target Start/End: Original strand, 39990582 - 39990727
Alignment:
Q  133 tatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcata 232  Q
    |||||||||||||||  |||||||||||||||||| |||||||||  ||  |||||||||||||  |||  |||||||||||||  || |||  ||| ||    
T  39990582 tatacaaataaataaacattaatgtattatttatatgtttgttaaggtaatttatgaaaaaacatcttaagaatatacaatttttattagtaaaatctta 39990681  T
Q  233 tgaattaacataaaggcttaattatttgcataagttcaatccaaac 278  Q
    |||||||| |||||   |||||||||| |||||| |||||||||||    
T  39990682 tgaattaagataaaaatttaattatttacataagctcaatccaaac 39990727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 246
Target Start/End: Original strand, 43318980 - 43319122
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||||||| || | ||| |||||||||| || || |||||||||||||||| |||||||  ||| ||||||||||||| |||||     
T  43318980 gcttattttagagcttatgcaaaacaacttatgcaaataaatatgtctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatg 43319079  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaa 246  Q
    ||  || |||||||||| ||  || | |||||||||| |||||    
T  43319080 aaggtataattttcgttagtgagaacttatgaattaagataaa 43319122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 279
Target Start/End: Original strand, 28357379 - 28357504
Alignment:
Q  154 atgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaa 253  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||| ||  | ||||||||||| ||  || | || ||||||| |||||  ||||     
T  28357379 atgtattatttataagtttgttaatgtagtttatgaaaaaacagtttatgaaggtccaattttcgttagtgagaacttacgaattaagataaaaacttat 28357478  T
Q  254 ttatttgcataagttcaatccaaacg 279  Q
    ||||||||||||| ||||||||||||    
T  28357479 ttatttgcataagctcaatccaaacg 28357504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 266
Target Start/End: Complemental strand, 40152956 - 40152823
Alignment:
Q  133 tatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcata 232  Q
    |||| |||||||||||| || || ||||||  |||| |||||||| |||| ||||||||||||||||||| || ||| ||||||||||| |  || | ||    
T  40152956 tatataaataaataagtttttatttattatccataaatttgttaagatagtttatgaaaaaacaatttatgaagataaaattttcgttcttgagaactta 40152857  T
Q  233 tgaattaacataaaggcttaattatttgcataag 266  Q
    |||||||| ||||| | ||| |||||||||||||    
T  40152856 tgaattaatataaaagattatttatttgcataag 40152823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 28625490 - 28625621
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||  || | |||||||| ||||| |||| ||  ||| |||||||||||||  |||| || |||||||||||||| ||  || | ||||||    
T  28625490 caaataaataagcttttaagtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacctatgaa 28625589  T
Q  237 ttaacataaaggcttaattatttgcataagtt 268  Q
    |||||||||| ||||| |||||||||||||||    
T  28625590 ttaacataaaagcttatttatttgcataagtt 28625621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 101 - 266
Target Start/End: Complemental strand, 29922301 - 29922136
Alignment:
Q  101 atggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattt 200  Q
    |||| ||||||| || |||||||||| |||  ||| ||||||||||||| || |||||||||| ||||| |||| ||  ||| ||||||||| |||  ||    
T  29922301 atggtttatttttgagcttatgcaaaacagtttatgcaaataaataagtttttatgtattattcataagcttgtcaaggtagtttatgaaaacacagctt 29922202  T
Q  201 ataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    ||  ||||||||||||  || ||  || | |||||||||| ||||| ||||| |||||||||||||    
T  29922201 atgcatatacaattttttttagtgagagcttatgaattaatataaaagcttatttatttgcataag 29922136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 104 - 219
Target Start/End: Original strand, 15122522 - 15122636
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||  ||| || | ||| |||| |||||||| || ||||||||||||||||||| ||||  ||| ||||||||||||| |||||     
T  15122522 gcttattttagagcttatataaaacaacttatgcaaagaaataagtttttatgtattatttataagttt-ttaaggtagtttatgaaaaaacagtttatg 15122620  T
Q  204 aatatacaattttcgt 219  Q
    || |||||||||||||    
T  15122621 aagatacaattttcgt 15122636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 26002975 - 26003090
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||||| ||||| |||| |||  ||| ||||||||||||| || ||||||||||||||||||||||||  ||  ||||||||||    ||||| |    
T  26002975 cttattttagagcttatacaaaacagtttatgcaaataaataagtttttatgtattatttataagtttgttaagttattttatgaaaaagtggtttatga 26003074  T
Q  205 atatacaattttcgtt 220  Q
    | ||||||||||||||    
T  26003075 agatacaattttcgtt 26003090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 266
Target Start/End: Original strand, 24030205 - 24030353
Alignment:
Q  117 cttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaatttt 216  Q
    ||||| |||| |||| ||| ||||||||||||  || |||||||||| ||||| |||| ||| ||| |||||||||||| | ||   |  ||||||||||    
T  24030205 cttatacaaaacagcttatccaaataaataagcttttatgtattattcataagcttgtcaaagtagtttatgaaaaaac-acttgcgaggatacaatttt 24030303  T
Q  217 cgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    |||| ||  || | |||||||||||||||| ||||| |||||||||||||    
T  24030304 cgttagtgagaacttatgaattaacataaaagcttatttatttgcataag 24030353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 106 - 266
Target Start/End: Original strand, 4728825 - 4728983
Alignment:
Q  106 ttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaa 205  Q
    |||||||||| |||||  ||| |||| ||| ||||||||||||| || ||||||||| || |||||| ||||  ||| ||||||||||||| ||||| ||    
T  4728825 ttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatctacaagttt-ttaaggtagtttatgaaaaaacagtttatgaa 4728923  T
Q  206 tatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
     ||| ||||||| || ||| || | ||| |||||| ||||| ||||| |||||| ||||||    
T  4728924 -atataattttccttagtaagagcttataaattaaaataaaagcttatttatttacataag 4728983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 196
Target Start/End: Original strand, 33757065 - 33757156
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaaca 196  Q
    |||||||||||| |||||  ||| |||| ||| ||||||||||||| || ||||||||||||||||||| ||||  ||| |||||||||||||    
T  33757065 gcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataagttt-ttaagctagtttatgaaaaaaca 33757156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 6026091 - 6025982
Alignment:
Q  106 ttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaa 205  Q
    |||||||||| ||||| ||||  ||  ||| |||||||||| || ||| |||||||||||||| ||||||||  ||| ||||||||||||  ||||||||    
T  6026091 ttattttagagcttatacaaaatagtttatgcaaataaatatgtttta-tgtattatttataattttgttaacgtagtttatgaaaaaacggtttataaa 6025993  T
Q  206 tatacaatttt 216  Q
     ||||||||||    
T  6025992 gatacaatttt 6025982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 246
Target Start/End: Complemental strand, 36206153 - 36206060
Alignment:
Q  154 atgtattatttataagtttgttaaaatagcttat-gaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaa 246  Q
    ||||||||||||||||||||||||  ||  ||||  |||||| || |||| ||||||||||||||||| ||| |||| |||||| |||||||||    
T  36206153 atgtattatttataagtttgttaaggtaatttataaaaaaaataacttatgaatatacaattttcgttagtaagatcttatgaactaacataaa 36206060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 2502818 - 2502730
Alignment:
Q  114 gaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttat 202  Q
    |||||||||||||  ||| |||||||||||| |||| ||||| ||||||| || || |||||||| ||| ||||||| || ||||||||    
T  2502818 gaacttatgcaaaagagcttatacaaataaacaagttttaatttattattcatgagcttgttaaagtagtttatgaataatcaatttat 2502730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 5203542 - 5203478
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataa 168  Q
    |||||||||||| |||||  ||| |||| ||| |||||||||||||||| |||||||||||||||    
T  5203542 gcttattttagagcttatataaaacagcttatgcaaataaataagtatttatgtattatttataa 5203478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 25332346 - 25332274
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaa 177  Q
    |||||||||||  ||||| |||  ||| ||| |||||||||||| |||||| |||||||||||||||||||||    
T  25332346 cttattttagagtttatgtaaaatagcttatgcaaataaataagcattaatatattatttataagtttgttaa 25332274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 265
Target Start/End: Complemental strand, 29418828 - 29418700
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    |||||||||| || || ||||||||||||||||  || |||  ||| ||||||||||||||||||| ||  ||||||||||||| ||  ||   ||| ||    
T  29418828 caaataaatatgtctttatgtattatttataagcatgctaatgtagtttatgaaaaaacaatttatgaaggtacaattttcgttagtgagaatttataaa 29418729  T
Q  237 ttaacataaaggcttaattatttgcataa 265  Q
    |||| |||||  |||| ||||||||||||    
T  29418728 ttaagataaaaacttatttatttgcataa 29418700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 266
Target Start/End: Original strand, 29659087 - 29659199
Alignment:
Q  154 atgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaa 253  Q
    |||||||||||||||| |||||||  ||| ||| ||||||||| ||||| ||  |||||||||| || ||  || | |||||||||| |||||  ||||     
T  29659087 atgtattatttataagcttgttaatgtagtttaagaaaaaacagtttatgaaagtacaattttcattagtgagaacttatgaattaagataaaaacttat 29659186  T
Q  254 ttatttgcataag 266  Q
    |||||||||||||    
T  29659187 ttatttgcataag 29659199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 117 - 196
Target Start/End: Complemental strand, 10537315 - 10537236
Alignment:
Q  117 cttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaaca 196  Q
    |||||| ||| |||| ||| ||||||||||||  || |||||||||||||||| |||| || |||| |||||||||||||    
T  10537315 cttatgtaaaacagcttatgcaaataaataagcttttatgtattatttataagcttgtcaagatagtttatgaaaaaaca 10537236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 42808873 - 42808944
Alignment:
Q  149 tattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgtt 220  Q
    |||| |||||||||| |||||||||| || |||| | ||| ||||||||||||| || ||||||||||||||    
T  42808873 tattgatgtattattcataagtttgtaaacatagttaatgcaaaaacaatttatgaagatacaattttcgtt 42808944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 263
Target Start/End: Complemental strand, 13060678 - 13060552
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||  || ||||||| || ||||| |||| ||  ||| |||||||||||||  |||| ||  ||| ||||||||| ||  || | ||||||    
T  13060678 caaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagttaccattttcgttagtgagaacttatgaa 13060579  T
Q  237 ttaacataaaggcttaattatttgcat 263  Q
    |||||||||| ||||| ||||||||||    
T  13060578 ttaacataaaagcttatttatttgcat 13060552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 194
Target Start/End: Complemental strand, 15710000 - 15709911
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaa 194  Q
    |||||||||||| |||||  ||| || | ||| ||||||||||||| ||  |||||||||||||||||| ||||| ||| |||||||||||    
T  15710000 gcttattttagagcttatataaaacaacttatgcaaataaataagtttttctgtattatttataagttt-ttaaagtagtttatgaaaaaa 15709911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 17657252 - 17657381
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||  || |||||||||| ||||| |||  |   ||| |||||||||||||  |||| || |||| ||||||||| ||  || | ||||||    
T  17657252 caaataaataagcttttatgtattattcataagcttgccattgtagtttatgaaaaaacatcttatgaagatacgattttcgttagtgagaacttatgaa 17657351  T
Q  237 ttaacataaaggcttaattatttgcataag 266  Q
    |||||||||| | ||| |||||||||||||    
T  17657352 ttaacataaaaggttatttatttgcataag 17657381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 194
Target Start/End: Original strand, 15363991 - 15364079
Alignment:
Q  106 ttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaa 194  Q
    ||||||||||  ||||| ||| |||  ||||||||||||||  ||||||||||||||||||||  ||||||| |||  || ||||||||    
T  15363991 ttattttagagtttatgtaaatcagtttatacaaataaatatatattaatgtattatttataaacttgttaagataatttttgaaaaaa 15364079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 246
Target Start/End: Complemental strand, 23087838 - 23087746
Alignment:
Q  154 atgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaa 246  Q
    |||||||||||||||| ||||||| |||| |||||||||||||| | || ||  ||||||||| ||| ||  || | |||||||||| |||||    
T  23087838 atgtattatttataagcttgttaatatagtttatgaaaaaacaactcatgaaggtacaatttttgttagtgagaacttatgaattaatataaa 23087746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 33667501 - 33667433
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagttt 172  Q
    |||||||||||| |||||  ||| |||| ||| ||||||||||||| || |||||||||||| ||||||    
T  33667501 gcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttacaagttt 33667433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 260
Target Start/End: Original strand, 11991295 - 11991437
Alignment:
Q  117 cttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaatttt 216  Q
    |||||||||| || | |||  |||||||||||  || |||||||||||||||| |||| || || | |||||||||||  | |||| || ||||||||||    
T  11991295 cttatgcaaaacaacttatgtaaataaataagcttttatgtattatttataagcttgtaaatatggtttatgaaaaaa-tagttatgaacatacaatttt 11991393  T
Q  217 cgttcgtacgatcatatgaattaacataaaggcttaattatttg 260  Q
    |||| ||  ||   ||| |||||||||||| ||||| |||||||    
T  11991394 cgttagtgagagtttataaattaacataaaagcttatttatttg 11991437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 15364100 - 15364143
Alignment:
Q  226 gatcatatgaattaacataaaggcttaattatttgcataagttc 269  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||    
T  15364100 gatcttatgaattaacataaaagcttatttatttgcataagttc 15364143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 200
Target Start/End: Original strand, 17128256 - 17128351
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattt 200  Q
    |||||||| || |||||||||| |||| ||| ||||||||||||  || |||||||||| ||||  || | ||| ||| ||||||||| |||||||    
T  17128256 cttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataaacttatcaaagtagtttatgaaaatacaattt 17128351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 22573643 - 22573726
Alignment:
Q  117 cttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattt 200  Q
    |||||||||| || | ||| ||||||||| ||| ||  |||||||||||||||||||| ||  ||| ||||||||| |||||||    
T  22573643 cttatgcaaaacaacttatgcaaataaatgagtttttttgtattatttataagtttgtaaatgtagtttatgaaaatacaattt 22573726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 38461362 - 38461279
Alignment:
Q  133 tatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaatttt 216  Q
    |||| |||||||||||  || ||||||||||||||||||||| ||  ||  ||||||||||||| ||||| || ||| ||||||    
T  38461362 tataaaaataaataagcctttatgtattatttataagtttgtaaatgtattttatgaaaaaacagtttatgaagatataatttt 38461279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 42478889 - 42478968
Alignment:
Q  190 aaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagttc 269  Q
    |||||||| |||| |||||||||||||  || |||  ||| |||||||||| |||||  |||| ||||||||||||||||    
T  42478889 aaaaacaacttatgaatatacaatttttatttgtaaaatcttatgaattaatataaaaacttatttatttgcataagttc 42478968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 341966 - 342036
Alignment:
Q  103 ggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttg 173  Q
    |||||||||| || ||||||||||||| |  ||  |||||||||||| || |||||||||||| |||||||    
T  341966 ggcttatttttgagcttatgcaaagcaactcatgtaaataaataagtttttatgtattatttacaagtttg 342036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 271
Target Start/End: Complemental strand, 7364365 - 7364251
Alignment:
Q  157 tattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaatta 256  Q
    ||||||| ||||| |||||||  ||| |||| || |||||| |||| || ||||||| || ||| ||  || | |||||||||| ||||| ||||| |||    
T  7364365 tattattcataagcttgttaaggtagtttatcaacaaacaacttatgaagatacaatatttgttagtgagaacttatgaattaatataaaagcttattta 7364266  T
Q  257 tttgcataagttcaa 271  Q
    |||||||||| ||||    
T  7364265 tttgcataagctcaa 7364251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 194
Target Start/End: Original strand, 17668377 - 17668466
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaa 194  Q
    |||||||||||| |||||  ||| || | ||| |||||||||| || || ||||||||||||||||||| ||||  ||| |||||||||||    
T  17668377 gcttattttagagcttatataaaacaacttatgcaaataaataggtgtttatgtattatttataagttt-ttaaggtagtttatgaaaaaa 17668466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 266
Target Start/End: Complemental strand, 20458666 - 20458505
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||  ||| |||| ||| ||||||||||  | || ||||||||||||||||||| ||||  ||| |||| ||||||    ||||     
T  20458666 gcttattttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttataagttt-ttaaggtagtttataaaaaaatgtgttatg 20458568  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    || |||||||||||||| ||  || | |||  ||||| ||||| ||||| |||||| ||||||    
T  20458567 aaaatacaattttcgttggtcagaacttatagattaaaataaaagcttatttatttacataag 20458505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 271
Target Start/End: Original strand, 41419531 - 41419645
Alignment:
Q  157 tattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaatta 256  Q
    ||||||| ||||| |||| ||  ||| |||||||||||||  |||| || |||||||||||||| ||  || | ||| ||||||||||||  |||| |||    
T  41419531 tattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacttatcaattaacataaaaacttattta 41419630  T
Q  257 tttgcataagttcaa 271  Q
    ||| |||||| ||||    
T  41419631 ttttcataagctcaa 41419645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 260
Target Start/End: Complemental strand, 11163288 - 11163235
Alignment:
Q  207 atacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttg 260  Q
    |||||||||||||| || ||| | |||||||||||||||| ||||| |||||||    
T  11163288 atacaattttcgttagtgcgaacttatgaattaacataaaagcttatttatttg 11163235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 18602618 - 18602691
Alignment:
Q  143 aataagtattaatgtattatttataagtttgttaaaatagcttatg-aaaaaacaatttataaatatacaattt 215  Q
    ||||||| || || ||||||| ||||| |||||||  ||||||||| ||||||||| |||| ||||||||||||    
T  18602618 aataagtttttatttattattcataagcttgttaaggtagcttatgaaaaaaacaacttatgaatatacaattt 18602691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 41059818 - 41059737
Alignment:
Q  184 ttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataa 265  Q
    |||||||||| ||  |||| || || ||||||||||| ||  || | |||||||||||||||| ||||| ||||||||||||    
T  41059818 ttatgaaaaatcaccttatgaagattcaattttcgttagtgagaacttatgaattaacataaaagcttatttatttgcataa 41059737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 6008297 - 6008234
Alignment:
Q  153 aatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgt 219  Q
    ||||||||||||| ||||||||||| |||  |||||   ||||||||||| || |||||||||||||    
T  6008297 aatgtattatttaaaagtttgttaagatattttatg---aaacaatttatgaagatacaattttcgt 6008234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 7984115 - 7984195
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttc 217  Q
    ||||||| ||||| || |||||||||| |||||||||| ||| | | ||  ||||||||| |||| ||| |||||||||||    
T  7984115 caaataactaagtttttatgtattattcataagtttgtcaaagttgtttgagaaaaaacagtttacaaagatacaattttc 7984195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 35078711 - 35078777
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataag-tattaatgtattatttataagttt 172  Q
    |||||||| ||||||||||||| || | |||||||||||||||| |||| ||||||||||||| |||||    
T  35078711 cttatttt-gaacttatgcaaaacaacttatacaaataaataagctatt-atgtattatttatgagttt 35078777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 3e-40; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 102 - 266
Target Start/End: Original strand, 30973964 - 30974128
Alignment:
Q  102 tggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattta 201  Q
    |||||||||||||| ||||||||||||||| |||  ||||||| ||| ||||||||||||||||||| ||||||||   || |||||||||||||| |||    
T  30973964 tggcttattttagagcttatgcaaagcagcttatgtaaataaagaagcattaatgtattatttataaatttgttaaggcagtttatgaaaaaacaactta 30974063  T
Q  202 taaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    | ||| ||||||||||||| ||| |||| ||||||||| |||||| ||||| |||||||||||||    
T  30974064 tgaatttacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataag 30974128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 102 - 275
Target Start/End: Complemental strand, 36907759 - 36907582
Alignment:
Q  102 tggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttat----aagtttgttaaaatagcttatgaaaaaacaa 197  Q
    |||||||||||||| ||||||||||||||  ||| |||||||| |||||||||||||||||||||    || ||||||||  ||| ||||||||||||||    
T  36907759 tggcttattttagagcttatgcaaagcagtttatgcaaataaagaagtattaatgtattatttatttataaatttgttaaggtagtttatgaaaaaacaa 36907660  T
Q  198 tttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagttcaatcca 275  Q
     || | ||||||||||||||||| ||| |||| ||||||||| |||||| ||||| ||||||||||||| ||||||||    
T  36907659 cttgtgaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagctcaatcca 36907582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 2563368 - 2563497
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| || | |||||||||||||  || ||| |||| ||||||    
T  2563368 caaataaataaatattaatgtattatttataagtttgttaaagtagtttatgaaaaaacaacttttgaatatacaatttttattagtaagatcttatgaa 2563467  T
Q  237 ttaacataaaggcttaattatttgcataag 266  Q
    |||||||||| || |||||||||| |||||    
T  2563468 ttaacataaaagcataattatttgtataag 2563497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 19925496 - 19925336
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||||| |||||||| | |||  ||| |||||||||||| |||||||||||||||||||  |||||||  ||| |||||||| ||||| |||| |    
T  19925496 cttattttagagcttatgcataacagtttatgcaaataaataagcattaatgtattatttataaacttgttaaggtag-ttatgaaataacaacttatga 19925398  T
Q  205 atatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    |||||||||||||||| ||| |||  |||||||||||||||| ||||||||||||| |||||    
T  19925397 atatacaattttcgttagtaagatattatgaattaacataaaagcttaattatttgtataag 19925336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 102 - 269
Target Start/End: Original strand, 14262301 - 14262468
Alignment:
Q  102 tggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattta 201  Q
    |||||| ||| ||| |||||| || ||| | ||| |||||||| ||| |||||||| |||||||||| ||||||||  ||| |||||||||||||| |||    
T  14262301 tggcttctttcagagcttatgtaaggcaccttatgcaaataaagaagcattaatgtgttatttataaatttgttaaggtagtttatgaaaaaacaactta 14262400  T
Q  202 taaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagttc 269  Q
    | ||||||||||||| ||| ||| |||| ||||||||||||||||  |||| || |||||||||||||    
T  14262401 tgaatatacaatttttgttagtaagatcttatgaattaacataaaaacttatttttttgcataagttc 14262468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 2669658 - 2669787
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||   ||||||||||||||||||||||||||  ||| |||||||||||||| |||| |||||||| ||||| || ||| |||| ||||||    
T  2669658 caaataaataagctctaatgtattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacatttttcattagtaggatcttatgaa 2669757  T
Q  237 ttaacataaaggcttaattatttgcataag 266  Q
    |||||||||| ||||| |||||| ||||||    
T  2669758 ttaacataaaagcttatttattttcataag 2669787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 105 - 245
Target Start/End: Original strand, 43577199 - 43577339
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||||| ||||||||||  ||  ||| ||||||||||| |||||||||||||||||||| ||||||||  ||| |||| ||||||||| ||||||    
T  43577199 cttattttagagcttatgcaaaatagtttatgcaaataaataaatattaatgtattatttataaatttgttaaggtagtttataaaaaaacaacttataa 43577298  T
Q  205 atatacaattttcgttcgtacgatcatatgaattaacataa 245  Q
    ||||| |||||||||| |||  ||  |||||||||||||||    
T  43577299 atataaaattttcgttagtaaaattttatgaattaacataa 43577339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 9782209 - 9782302
Alignment:
Q  153 aatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaa 246  Q
    ||||||||||||||||| |||||||| ||| |||| ||||||||| |||| ||||||||||||||||| ||| |||| ||||||||||||||||    
T  9782209 aatgtattatttataagcttgttaaagtagtttattaaaaaacaacttatgaatatacaattttcgttagtaagatcttatgaattaacataaa 9782302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 266
Target Start/End: Original strand, 12607057 - 12607218
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||  ||| |||||||| ||||||||||||| || ||||||||||||||||||| ||||  ||| ||||||||||||  |||||     
T  12607057 gcttattttagagcttatataaaacagcatatgcaaataaataagtttttatgtattatttataagttt-ttaaggtagtttatgaaaaaacggtttatg 12607155  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    || ||||||||| |||| ||  || | ||| |||||| ||||| ||||| |||||| ||||||    
T  12607156 aagatacaatttccgttagtgagagcttataaattaaaataaaagcttatttatttacataag 12607218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 1184793 - 1184922
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    |||||||||||| |||||||||| ||||| |||||||||||  ||| ||||  |||||||| || ||||||||||||||||||| ||| |||  ||| ||    
T  1184793 caaataaataagcattaatgtatcatttaaaagtttgttaaggtagtttatctaaaaacaacttctaaatatacaattttcgttagtaggatattataaa 1184892  T
Q  237 ttaacataaaggcttaattatttgcataag 266  Q
    ||||||| ||  |||||||||||| |||||    
T  1184893 ttaacattaaaacttaattatttgtataag 1184922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 106 - 220
Target Start/End: Original strand, 19925536 - 19925650
Alignment:
Q  106 ttattttagaacttatgcaaagcagcatatacaaataaataag-tattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    |||||||||  ||||| |||| |||| ||| |||||||||||| | ||||| |||||||||||||||||||||  ||  ||| ||||||||||||||| |    
T  19925536 ttattttagggcttatacaaaacagcttatgcaaataaataagcttttaat-tattatttataagtttgttaaggtattttacgaaaaaacaatttatga 19925634  T
Q  205 atatacaattttcgtt 220  Q
    | ||||||||||||||    
T  19925635 agatacaattttcgtt 19925650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 42102085 - 42102199
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||||| |||||  ||| |||| ||| ||||||||||||| || ||||||||||||||||||| ||||  ||| ||||||||||||  || || |    
T  42102085 cttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataagttt-ttaaggtagtttatgaaaaaaccgttaatga 42102183  T
Q  205 atatacaattttcgtt 220  Q
    | ||||||||||||||    
T  42102184 agatacaattttcgtt 42102199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 266
Target Start/End: Complemental strand, 42363425 - 42363264
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||  |||  ||| ||| ||||||||||||| || ||||||||||||||||||| ||||  ||| ||||||||||||  |||||     
T  42363425 gcttattttagagcttatataaaatagcttatgcaaataaataagtttttatgtattatttataagttt-ttaaggtagtttatgaaaaaaccgtttatg 42363327  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    || |||||||||| ||| ||  || | | | |||||| ||||| ||||| |||||| ||||||    
T  42363326 aagatacaatttttgttagtgagaacttttaaattaaaataaaagcttatttatttacataag 42363264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 105 - 265
Target Start/End: Original strand, 32131418 - 32131578
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    |||||||| || |||||||||| |||| ||| ||||||||||||  || ||| ||||||  ||||||||| ||  ||| ||||||| ||||||  ||| |    
T  32131418 cttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgcattattcctaagtttgtcaaggtagtttatgaataaacaacctatga 32131517  T
Q  205 atatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataa 265  Q
    | |||||||||||  | ||  || | |||||||||||||||| |||||  |||||||||||    
T  32131518 agatacaattttcaatagtgagaacttatgaattaacataaaagcttatctatttgcataa 32131578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 11988207 - 11988337
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||| || ||||||||||||||||||| ||||  ||| | ||||||||||  ||||| || |||||||||||||| ||  || | ||| ||    
T  11988207 caaataaataagtttttatgtattatttataagttt-ttaaggtagttcatgaaaaaaccgtttatgaagatacaattttcgttagtgagagcttataaa 11988305  T
Q  237 ttaacataaaggcttaattatttgcataagtt 268  Q
    |||| ||||| || || |||||| ||||||||    
T  11988306 ttaaaataaaagcatatttatttacataagtt 11988337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 266
Target Start/End: Complemental strand, 31079240 - 31079113
Alignment:
Q  139 aataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaatt 238  Q
    |||||||| | ||| ||||||||||| ||||||||||||| ||| ||| ||||||||  ||||||||  ||||||||||| | ||   | | ||||||||    
T  31079240 aataaatatgcatttatgtattatttttaagtttgttaaagtagtttacgaaaaaactgtttataaagttacaattttcgatagtgaaaacttatgaatt 31079141  T
Q  239 aacataaaggcttaattatttgcataag 266  Q
    || |||||  |||| |||||||||||||    
T  31079140 aagataaaaacttatttatttgcataag 31079113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 266
Target Start/End: Complemental strand, 37411021 - 37410860
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||  ||| |||  |||  |||||||||||| || ||||||||||||||| ||| ||||  ||| ||||||||||||| || ||     
T  37411021 gcttattttagagcttatataaaacagtttatgtaaataaataagtttttatgtattatttataatttt-ttaaggtagtttatgaaaaaacagttcatg 37410923  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    || |||||||||||||| ||| || | ||| |||||| ||| |  |||| |||||| ||||||    
T  37410922 aagatacaattttcgttagtaagaacttataaattaaaatataaacttatttatttacataag 37410860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 32975697 - 32975826
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||  || || ||||||| ||||| |||| ||  ||| ||||||||| |||| |||| || |||||||||| ||| ||  || | ||||||    
T  32975697 caaataaataagcttttatatattattcataagcttgtcaaggtagtttatgaaaacacaacttatgaagatacaatttttgtttgtgagaacttatgaa 32975796  T
Q  237 ttaacataaaggcttaattatttgcataag 266  Q
    |||| ||||| ||||| |||||||||||||    
T  32975797 ttaatataaaagcttatttatttgcataag 32975826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 14942399 - 14942559
Alignment:
Q  102 tggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattta 201  Q
    |||||||||||||| |||||| ||| || | |||  | |||||||||  ||  ||||||||||||||| |||||||  ||| |||||||||||| | |||    
T  14942399 tggcttattttagagcttatgtaaaacaacttatgtatataaataagcttttgtgtattatttataagcttgttaagttagtttatgaaaaaacgactta 14942498  T
Q  202 taaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgca 262  Q
    | || || ||||||| ||| | | || | ||| ||||||||||||  |||| |||||||||    
T  14942499 tgaagatgcaatttttgttagcaagaacttataaattaacataaaaccttatttatttgca 14942559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 23412744 - 23412812
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaa 205  Q
    |||||| ||||||||| |||||||||| ||||  |||| || |||| ||||||||||||||||||||||    
T  23412744 caaatatataagtatttatgtattattcataaacttgtcaatatagtttatgaaaaaacaatttataaa 23412812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 192
Target Start/End: Complemental strand, 2019757 - 2019670
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaa 192  Q
    ||||||||||| |||||||||| || | ||| |||||||||||||  | |||||||||||| ||| ||||||| |||| |||| ||||    
T  2019757 cttattttagagcttatgcaaaacatcttatgcaaataaataagtcattatgtattatttacaagcttgttaagatagtttataaaaa 2019670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 28280719 - 28280777
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaac 195  Q
    |||||||||| | ||| ||||||||||||||||||||||||  ||| ||||||||||||    
T  28280719 caaataaatatgcatttatgtattatttataagtttgttaatgtagtttatgaaaaaac 28280777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 266
Target Start/End: Complemental strand, 38338959 - 38338798
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||  ||| |||| ||| ||||||||||||| || |  |||||||||||||||| ||||  ||| ||||||||||| | |||||     
T  38338959 gcttattttagagcttatataaaacagcttatgcaaataaataagtttttaaatattatttataagttt-ttaaggtagtttatgaaaaaatagtttatg 38338861  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    || |||  ||||||||| ||  || | ||| |||||| |||||  |||| |||||| ||||||    
T  38338860 aagatatgattttcgttagtgagaacttataaattaaaataaaaacttatttatttacataag 38338798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 266
Target Start/End: Complemental strand, 9131204 - 9131075
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    |||||| |||||  || |||||||||||||||| ||||  |  ||| || |||| |||||  |||| || |||||||||||||| ||  || | ||||||    
T  9131204 caaatatataagcttttatgtattatttataagcttgtcgatttagtttctgaagaaacagcttatgaagatacaattttcgttagtcggaacttatgaa 9131105  T
Q  237 ttaacataaaggcttaattatttgcataag 266  Q
    |||||||||| | ||| |||||||||||||    
T  9131104 ttaacataaaagtttatttatttgcataag 9131075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 32751115 - 32751231
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaa-caatttat 202  Q
    ||||||||||||||||||   || ||   ||| ||||||||||| | || ||||| |||| |||||||| ||||| ||| ||||||||||| || |||||    
T  32751115 gcttattttagaacttatattaaacaatttatgcaaataaataaatttttatgtactattaataagttt-ttaaagtagtttatgaaaaaaacattttat 32751213  T
Q  203 aaatatacaattttcgtt 220  Q
    ||| ||||||||||||||    
T  32751214 aaaaatacaattttcgtt 32751231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 216
Target Start/End: Original strand, 38195464 - 38195575
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||  ||| || | ||| ||||||||||||| || || |||||||||||||||| ||||  ||| ||| ||||||||| |||||     
T  38195464 gcttattttagagcttatataaaacaacttatgcaaataaataagtttttatatattatttataagttt-ttaaggtagtttacgaaaaaacagtttatg 38195562  T
Q  204 aatatacaatttt 216  Q
     | ||||||||||    
T  38195563 gaaatacaatttt 38195575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 265
Target Start/End: Complemental strand, 218327 - 218202
Alignment:
Q  138 aaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaat 237  Q
    |||||||||| | || ||||||||||||||||||| ||||  ||| ||||| |||||| |||||| || |||||||||||||| |||  | | ||| |||    
T  218327 aaataaataaatttttatgtattatttataagttt-ttaaggtagtttatg-aaaaactatttatgaagatacaattttcgttagtaatagcttataaat 218230  T
Q  238 taacataaaggcttaattatttgcataa 265  Q
    ||| |||||  |||| |||||| |||||    
T  218229 taaaataaaaacttacttatttacataa 218202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 265
Target Start/End: Complemental strand, 694887 - 694762
Alignment:
Q  138 aaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaat 237  Q
    |||||||||| | || ||||||||||||||||||| ||||  ||| ||||| |||||| |||||| || |||||||||||||| |||  | | ||| |||    
T  694887 aaataaataaatttttatgtattatttataagttt-ttaaggtagtttatg-aaaaactatttatgaagatacaattttcgttagtaatagcttataaat 694790  T
Q  238 taacataaaggcttaattatttgcataa 265  Q
    ||| |||||  |||| |||||| |||||    
T  694789 taaaataaaaacttacttatttacataa 694762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 265
Target Start/End: Complemental strand, 699096 - 698971
Alignment:
Q  138 aaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaat 237  Q
    |||||||||| | || ||||||||||||||||||| ||||  ||| ||||| |||||| |||||| || |||||||||||||| |||  | | ||| |||    
T  699096 aaataaataaatttttatgtattatttataagttt-ttaaggtagtttatg-aaaaactatttatgaagatacaattttcgttagtaatagcttataaat 698999  T
Q  238 taacataaaggcttaattatttgcataa 265  Q
    ||| |||||  |||| |||||| |||||    
T  698998 taaaataaaaacttacttatttacataa 698971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 265
Target Start/End: Complemental strand, 731950 - 731825
Alignment:
Q  138 aaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaat 237  Q
    |||||||||| | || ||||||||||||||||||| ||||  ||| ||||| |||||| |||||| || |||||||||||||| |||  | | ||| |||    
T  731950 aaataaataaatttttatgtattatttataagttt-ttaaggtagtttatg-aaaaactatttatgaagatacaattttcgttagtaatagcttataaat 731853  T
Q  238 taacataaaggcttaattatttgcataa 265  Q
    ||| |||||  |||| |||||| |||||    
T  731852 taaaataaaaacttacttatttacataa 731825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 265
Target Start/End: Complemental strand, 855846 - 855721
Alignment:
Q  138 aaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaat 237  Q
    |||||||||| | || ||||||||||||||||||| ||||  ||| ||||| |||||| |||||| || |||||||||||||| |||  | | ||| |||    
T  855846 aaataaataaatttttatgtattatttataagttt-ttaaggtagtttatg-aaaaactatttatgaagatacaattttcgttagtaatagcttataaat 855749  T
Q  238 taacataaaggcttaattatttgcataa 265  Q
    ||| |||||  |||| |||||| |||||    
T  855748 taaaataaaaacttacttatttacataa 855721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 19327857 - 19327955
Alignment:
Q  117 cttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaatttt 216  Q
    |||||||||| || | ||| |||||||||||   || |||||||||| ||||||||| |||  ||| ||||| ||||||| |||||||| ||||||||||    
T  19327857 cttatgcaaaacaacttatgcaaataaataaacttttatgtattattcataagtttg-taatgtagtttatggaaaaacagtttataaagatacaatttt 19327955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 267
Target Start/End: Complemental strand, 14725021 - 14724911
Alignment:
Q  157 tattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaatta 256  Q
    ||||||||||||| |||||||  ||  |||||||||||||| ||||  |  || ||||||||||  || || | |||||||||| |||||  |||| |||    
T  14725021 tattatttataagattgttaatgtaatttatgaaaaaacaacttatgtaggtataattttcgttaataagaacttatgaattaagataaaaacttattta 14724922  T
Q  257 tttgcataagt 267  Q
    |||||||||||    
T  14724921 tttgcataagt 14724911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 265
Target Start/End: Complemental strand, 16926807 - 16926676
Alignment:
Q  138 aaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaa----aaaacaatttataaatatacaattttcgttcgtacgatcatat 233  Q
    ||||||||||   ||||||||||||| || ||||||| || |||| |||||||    |||||| |||||||| | ||||||| |||| ||  || | |||    
T  16926807 aaataaataaactttaatgtattattgattagtttgtaaatatagtttatgaagaaaaaaacagtttataaagaaacaatttccgttagtgagaacttat 16926708  T
Q  234 gaattaacataaaggcttaattatttgcataa 265  Q
     ||||||||||||  |||| ||||||||||||    
T  16926707 aaattaacataaaaacttatttatttgcataa 16926676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 24350548 - 24350466
Alignment:
Q  184 ttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    ||||||||||| |  |||| || ||| |||||||||| ||| || | ||||||||||||||||  |||| |||||||||||||    
T  24350548 ttatgaaaaaatagcttatgaagatataattttcgttagtaagaacttatgaattaacataaaatcttatttatttgcataag 24350466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 24867010 - 24866944
Alignment:
Q  154 atgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgtt 220  Q
    |||||||||||||||| |||||||  ||| |||||||||||||  |||| ||  |||||||||||||    
T  24867010 atgtattatttataagattgttaatgtagtttatgaaaaaacagcttatgaaggtacaattttcgtt 24866944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 42666976 - 42667065
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaac 195  Q
    |||||||||| ||||||  ||| || | ||| |||||||| ||||  | ||||||||||||||||||| ||||||||| ||||| ||||||    
T  42666976 cttattttaggacttatataaaacaacttatgcaaataaacaagttgttatgtattatttataagttt-ttaaaatagtttatggaaaaac 42667065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 402163 - 402122
Alignment:
Q  138 aaataaataagtattaatgtattatttataagtttgttaaaa 179  Q
    |||||||||||| || ||||||||||||||||||||| ||||    
T  402163 aaataaataagtttttatgtattatttataagtttgtcaaaa 402122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 35168500 - 35168435
Alignment:
Q  154 atgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgt 219  Q
    |||||||||| ||||| |||| ||  ||| ||||||||||||| ||||| || |||||||||||||    
T  35168500 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattttcgt 35168435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 9131023 - 9130959
Alignment:
Q  207 atacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagttcaa 271  Q
    |||||||||||||| ||  || | |||||||||||||||| | ||| ||||||||||||| ||||    
T  9131023 atacaattttcgttagtcggaacttatgaattaacataaaagtttatttatttgcataagctcaa 9130959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 16706196 - 16706116
Alignment:
Q  117 cttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaa 197  Q
    |||||||||| | || ||| |||||||||| || || |||||||||| |||||||||  ||  ||| ||||||||||||||    
T  16706196 cttatgcaaaacggcttatgcaaataaatatgtttttatgtattattcataagtttgaaaatgtagtttatgaaaaaacaa 16706116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 29218333 - 29218289
Alignment:
Q  133 tatacaaataaataagtattaatgtattatttataagtttgttaa 177  Q
    |||||||||| |||||| || ||||||||||| ||||||||||||    
T  29218333 tatacaaatacataagtttttatgtattatttttaagtttgttaa 29218289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 31459036 - 31459136
Alignment:
Q  117 cttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttat-gaaaaaacaatttataaatatacaattt 215  Q
    |||||| |||||||  |||  |||||||||| | || || |||||||||||||||||| || |||| ||||  |||||||| |||||||| | |||||||    
T  31459036 cttatgaaaagcagtttatgtaaataaataaatttttatatattatttataagtttgtcaatatagtttataaaaaaaacagtttataaagaaacaattt 31459135  T
Q  216 t 216  Q
    |    
T  31459136 t 31459136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 37966299 - 37966227
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaa 177  Q
    |||||||||||  |||||||||  ||| ||| ||||||||||  |||  |||||||||||||||| |||||||    
T  37966299 cttattttagagtttatgcaaaatagcttatgcaaataaatatttatatatgtattatttataagcttgttaa 37966227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 41145451 - 41145344
Alignment:
Q  157 tattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaatta 256  Q
    ||||||| |||||||||||||  ||| |||||||||||||| || |||| |||| |||||| || ||  || | |||||||||| ||| |  |||| |||    
T  41145451 tattattcataagtttgttaaggtagtttatgaaaaaacaactt-taaagatacgattttcattagtgagaacttatgaattaatatataaacttattta 41145353  T
Q  257 tttgcataa 265  Q
    |||||||||    
T  41145352 tttgcataa 41145344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 7e-38; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 102 - 266
Target Start/End: Original strand, 35809065 - 35809229
Alignment:
Q  102 tggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattta 201  Q
    |||||||||||||| ||||| ||||||| | ||| |||||||||||| |||||||||||||||||||| |||||||  ||| |||||||||||||| |||    
T  35809065 tggcttattttagagcttatacaaagcatcttatgcaaataaataagcattaatgtattatttataagcttgttaacgtagtttatgaaaaaacaactta 35809164  T
Q  202 taaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
      |||||||||||||||   ||| |||  |||||||||||||||| |||||||||||| ||||||    
T  35809165 agaatatacaattttcgccagtaagattttatgaattaacataaaagcttaattatttacataag 35809229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 22319402 - 22319243
Alignment:
Q  102 tggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattta 201  Q
    ||||||||||||||  ||||||||||  |  ||| |||||||||||  |||||||||||||| ||||||||||||| |||| |||||||| ||||| |||    
T  22319402 tggcttattttagagtttatgcaaagaggtttatgcaaataaataaacattaatgtattattcataagtttgttaacatagtttatgaaacaacaactta 22319303  T
Q  202 taaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgca 262  Q
    | ||||||||||||||||| ||| |||  ||| ||||||||| || |||||||||||||||    
T  22319302 tgaatatacaattttcgttagtaagatattat-aattaacatcaaagcttaattatttgca 22319243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 105 - 246
Target Start/End: Original strand, 22575564 - 22575705
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||||| |||||| ||| || | ||| |||||||||| || || |||||||||||||||||||||||| |||  ||||||||||||| ||||| |    
T  22575564 cttattttagagcttatgtaaaacatcttatgcaaataaatacgtttttatgtattatttataagtttgttaagatattttatgaaaaaacagtttatga 22575663  T
Q  205 atatacaattttcgttcgtacgatcatatgaattaacataaa 246  Q
    | |||||||||||||| ||| || | ||| |||||| |||||    
T  22575664 agatacaattttcgttagtaagagcttataaattaaaataaa 22575705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 266
Target Start/End: Original strand, 22032739 - 22032901
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||| ||| || | ||| |||||||||| || || ||||||||||||||||  ||||||  ||| |||||||||||||||||||     
T  22032739 gcttattttagagcttatgtaaaacaacttatgcaaataaatatgtttttatgtattatttataagcatgttaatgtagtttatgaaaaaacaatttatg 22032838  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    ||  ||||||||||||| ||  || | ||| |||||| |||||  |||| |||||||||||||    
T  22032839 aaggtacaattttcgttagtgagaacttataaattaagataaaaacttatttatttgcataag 22032901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 29378655 - 29378784
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||  || ||||||||||||| ||||||| ||  ||| |||||||||||||  |||| || |||||||||||||| ||| || | ||||||    
T  29378655 caaataaataagcttttatgtattatttatgagtttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtaagaacttatgaa 29378754  T
Q  237 ttaacataaaggcttaattatttgcataag 266  Q
    ||||| |||| ||||| |||||||||||||    
T  29378755 ttaacgtaaaagcttatttatttgcataag 29378784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 266
Target Start/End: Original strand, 28004561 - 28004722
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||  ||| |||| ||| ||||||||||||| || ||||||||||||||| ||| || || ||| |||||||||||| ||||||     
T  28004561 gcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-tttttttaagtagtttatgaaaaaaccatttatg 28004659  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    || |||||| ||||||  | | || | ||| |||||| ||||| ||||| |||||||||||||    
T  28004660 aagatacaaatttcgtcagcaagagcttataaattaaaataaaagcttatttatttgcataag 28004722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 47862732 - 47862860
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    |||||||||||| |||| |||||||||| ||||||| ||||  |   ||||||||||| |||||||||||||||||||||||||  ||  ||| ||||||    
T  47862732 caaataaataagcatta-tgtattatttttaagttttttaaggtgatttatgaaaaaataatttataaatatacaattttcgttaataaaatcttatgaa 47862830  T
Q  237 ttaacataaaggcttaattatttgcataag 266  Q
    ||||||||||   |||||||||| ||||||    
T  47862831 ttaacataaaaatttaattatttacataag 47862860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 266
Target Start/End: Complemental strand, 47654523 - 47654361
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| ||| |||||| |||| |||  ||||||||| |   | ||||||||| |||||| |||||||  ||| ||||||||||||| |||||     
T  47654523 gcttattttagagcttttgcaaaacagcttatgtaaataaatatgccctgatgtattatatataagcttgttaatgtagtttatgaaaaaacagtttatg 47654424  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    ||  ||||||||||||| ||  || | |||||||||| |||||  |||| |||||||||||||    
T  47654423 aaggtacaattttcgttagtgagaacttatgaattaagataaaaacttatttatttgcataag 47654361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 266
Target Start/End: Complemental strand, 44613569 - 44613420
Alignment:
Q  117 cttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaatttt 216  Q
    |||||||||| |||| ||| ||||||||||||  || || ||||||| ||||| |||||||  ||| |||||||||||||| |||| |  ||||||||||    
T  44613569 cttatgcaaaacagcttatgcaaataaataagcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgacgatacaatttt 44613470  T
Q  217 cgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
      ||  |  || | |||||||||| ||||| ||||| |||||||||||||    
T  44613469 tattaattagaacttatgaattaatataaaagcttatttatttgcataag 44613420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 24371515 - 24371447
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagttt 172  Q
    |||||||||||| |||||  ||| |||| ||| ||||||||||||| ||||||||||||||||||||||    
T  24371515 gcttattttagagcttatataaaacagcttatgcaaataaataagttttaatgtattatttataagttt 24371447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 103 - 268
Target Start/End: Original strand, 20888549 - 20888715
Alignment:
Q  103 ggcttattttagaacttatgcaaagcagcatatacaaataaataag-tattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattta 201  Q
    |||||||||  |||||||  |||| |||  ||| |||||||||||| | || |||||||||| ||||| |||  ||  ||| ||||||||||||||||||    
T  20888549 ggcttatttatgaacttaaacaaaacagtttatgcaaataaataagctttttatgtattattcataagcttgcaaaggtagtttatgaaaaaacaattta 20888648  T
Q  202 taaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagtt 268  Q
    | || ||||||||||| | |||   | | ||| ||||||||||||  |||| |||||||||||||||    
T  20888649 tgaagatacaattttcttccgtgaaaacttataaattaacataaaaacttacttatttgcataagtt 20888715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 263
Target Start/End: Complemental strand, 14691358 - 14691249
Alignment:
Q  154 atgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaa 253  Q
    |||||||||| ||||| |||| ||  ||  ||||||||||||||||||| || ||| |||||||||| ||  || | |||||||||||||||| | |||     
T  14691358 atgtattattcataagcttgtcaatgtaatttatgaaaaaacaatttatgaagatataattttcgttagtgagaacttatgaattaacataaaaggttat 14691259  T
Q  254 ttatttgcat 263  Q
    ||||||||||    
T  14691258 ttatttgcat 14691249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 266
Target Start/End: Complemental strand, 16933001 - 16932877
Alignment:
Q  141 taaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaa 240  Q
    ||||||| | || ||||||||||||||||||| ||||  ||| |||||||||||| |||||| || |||||||||||||| |||  | | ||| ||||||    
T  16933001 taaataaatttttatgtattatttataagttt-ttaaggtagtttatgaaaaaaccatttatgaagatacaattttcgttagtaaaagcttataaattaa 16932903  T
Q  241 cataaaggcttaattatttgcataag 266  Q
     ||||| ||||| |||| | ||||||    
T  16932902 aataaaagcttatttatatacataag 16932877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 266
Target Start/End: Complemental strand, 16938384 - 16938260
Alignment:
Q  141 taaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaa 240  Q
    ||||||| | || ||||||||||||||||||| ||||  ||| |||||||||||| |||||| || |||||||||||||| |||  | | ||| ||||||    
T  16938384 taaataaatttttatgtattatttataagttt-ttaaggtagtttatgaaaaaaccatttatgaagatacaattttcgttagtaaaagcttataaattaa 16938286  T
Q  241 cataaaggcttaattatttgcataag 266  Q
     ||||| ||||| |||| | ||||||    
T  16938285 aataaaagcttatttatatacataag 16938260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 14676035 - 14675956
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttc 217  Q
    |||||||||| || || ||||||||||||||||||| ||||  ||| ||||||||||||| ||||| || |||||||||||    
T  14676035 caaataaataggtgtttatgtattatttataagttt-ttaaggtagtttatgaaaaaacagtttatgaagatacaattttc 14675956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 1312093 - 1312203
Alignment:
Q  106 ttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaa 205  Q
    |||||||||| |||||  ||| |||| |||||| |||||||||| || || |||||||||||||||| ||||   || ||||||||||||  ||||| ||    
T  1312093 ttattttagagcttataaaaaacagcttatacagataaataagtttttatatattatttataagttt-ttaaggcagtttatgaaaaaaccgtttatgaa 1312191  T
Q  206 tatacaattttc 217  Q
    |||||| |||||    
T  1312192 tatacacttttc 1312203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 266
Target Start/End: Original strand, 991513 - 991638
Alignment:
Q  140 ataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaatta 239  Q
    |||||||||| || ||| ||||||||||||||| ||||  ||| |||||||||||| |||||| || ||||| |||||||| ||  ||   ||| |||||    
T  991513 ataaataagtttttatgcattatttataagttt-ttaaggtagtttatgaaaaaaccatttatgaagatacacttttcgttagtgagagtttataaatta 991611  T
Q  240 acataaaggcttaattatttgcataag 266  Q
    | ||||| ||||| |||||| ||||||    
T  991612 aaataaaagcttatttatttacataag 991638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 266
Target Start/End: Original strand, 16958793 - 16958954
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    ||||||||| || |||||  ||| || | ||| ||| ||||||| | || ||||||||||||||||||| ||||  ||| ||||||||||||  |||||     
T  16958793 gcttatttttgagcttatataaaacaacttatgcaactaaataaatttttatgtattatttataagttt-ttaaggtagtttatgaaaaaaccgtttatg 16958891  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    || |||||||||||||| |||  | | ||| |||||| ||||| ||||| |||| | ||||||    
T  16958892 aagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataag 16958954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 263
Target Start/End: Original strand, 38372536 - 38372694
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    |||||||| || |||||||||| |||| ||| ||||||||||||   | |||||||||| |||||||||| ||  ||| ||| |||||| ||  | |  |    
T  38372536 cttatttttgagcttatgcaaaacagcttatgcaaataaataagctcttatgtattattcataagtttgtcaaggtagtttacgaaaaagcagctcaaga 38372635  T
Q  205 atatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcat 263  Q
    | | |||||||||||| ||  || | |||||||||||||||| ||| | ||||||||||    
T  38372636 agaaacaattttcgttagtgagaacttatgaattaacataaaagctgatttatttgcat 38372694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 18251565 - 18251491
Alignment:
Q  171 ttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaa 246  Q
    |||||||| ||| |||||||||| |||||||| ||||||||||||||||| | |  ||| ||| ||||||||||||    
T  18251565 ttgttaaagtagtttatgaaaaa-caatttatgaatatacaattttcgttagcaaaatcttataaattaacataaa 18251491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 7098180 - 7098118
Alignment:
Q  133 tatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaac 195  Q
    ||||||||||||||||  || ||| |||||| |||||||||| || |||| ||||||||||||    
T  7098180 tatacaaataaataagattttatgaattattcataagtttgtcaagatagtttatgaaaaaac 7098118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 271
Target Start/End: Original strand, 12473391 - 12473497
Alignment:
Q  165 ataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcata 264  Q
    |||||||||| ||  ||| ||||||||||||| |||||||| | |||||||||||| ||  || | ||| |||||| ||| | ||||| ||||||| |||    
T  12473391 ataagtttgtaaatgtagtttatgaaaaaacagtttataaagaaacaattttcgtttgtgagaacttataaattaatatataagcttatttatttgaata 12473490  T
Q  265 agttcaa 271  Q
    || ||||    
T  12473491 agctcaa 12473497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 18837197 - 18837243
Alignment:
Q  102 tggcttattttagaacttatgcaaagcagcatatacaaataaataag 148  Q
    ||||||||||| || |||||||||| |||||||| ||||||||||||    
T  18837197 tggcttatttttgagcttatgcaaaacagcatatgcaaataaataag 18837243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 21027584 - 21027510
Alignment:
Q  142 aaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaatttt 216  Q
    |||||||| || ||||||||||||||||||| ||||  | | ||||||||||||| ||| | || ||||||||||    
T  21027584 aaataagtttttatgtattatttataagtttattaaggtggtttatgaaaaaacagtttttgaagatacaatttt 21027510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 266
Target Start/End: Complemental strand, 23137271 - 23137110
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||  |||  | | |||||||| |||||| | || ||||||||||||||||||| ||||  ||| ||||| |||||   |||||     
T  23137271 gcttattttagagcttatataaaataacttatacaaacaaataaatttttatgtattatttataagttt-ttaaggtagtttatgtaaaaatcgtttatg 23137173  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    || ||||||||||| || ||  || | ||| |||||| ||||| ||||| |||||| ||||||    
T  23137172 aagatacaattttcattagtgagagcttataaattaaaataaaagcttacttatttacataag 23137110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 266
Target Start/End: Complemental strand, 30094811 - 30094676
Alignment:
Q  133 tatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaa---aaaacaatttataaatatacaattttcgttcgtacgatc 229  Q
    |||||||||||||  || ||||| ||||||||||||| |||||||  ||| |||||||   |||||| ||||| ||   ||| ||||| || ||  ||||    
T  30094811 tatacaaataaatgtgtcttaatatattatttataagattgttaatgtagtttatgaaaaaaaaacagtttatgaa-ggacacttttcattggtgagatc 30094713  T
Q  230 atatgaattaacataaaggcttaattatttgcataag 266  Q
     |||||||||| ||||| ||||| |||||||||||||    
T  30094712 ttatgaattaagataaaagcttatttatttgcataag 30094676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 265
Target Start/End: Original strand, 41094228 - 41094352
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||  || |||||||| | ||||| |||| ||  | | |||||||||||  | |||| || |||||||||||||| ||| ||  |||||||    
T  41094228 caaataaataagcctttatgtattactcataagcttgtcaaggtggtttatgaaaaaa--acttatgaagatacaattttcgttagtaaga--atatgaa 41094323  T
Q  237 ttaacataaaggcttaattatttgcataa 265  Q
    |||||||| || |||| ||||||||||||    
T  41094324 ttaacatacagccttatttatttgcataa 41094352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 21249166 - 21249219
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaa 190  Q
    ||||||||||||| || |||||||||| ||||||||  |||||||| |||||||    
T  21249166 caaataaataagtttttatgtattattcataagtttaataaaatagtttatgaa 21249219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 35246649 - 35246762
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| | |||  ||| || | ||| ||||||||||||| || |||||||||||| |||||| ||||  ||| ||||||||||||  |||||     
T  35246649 gcttattttagagcctatataaaacaacttatgcaaataaataagtttttatgtattatttaaaagttt-ttaaggtagtttatgaaaaaac--tttatg 35246745  T
Q  204 aatatacaattttcgtt 220  Q
    |  ||||||||||||||    
T  35246746 aggatacaattttcgtt 35246762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 18260954 - 18260890
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataa 168  Q
    |||||||||||  |||||| ||| || | |||  |||||||||||||||||||||||| ||||||    
T  18260954 gcttattttagtgcttatgaaaaacaacttatgtaaataaataagtattaatgtattagttataa 18260890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 223
Target Start/End: Complemental strand, 23120029 - 23119910
Alignment:
Q  103 ggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttat 202  Q
    |||||||||| || |||||||||| || | ||| |||||||||||   |||| |||||||| |||||||||| ||  ||| ||| |||| |||| ||| |    
T  23120029 ggcttatttt-gagcttatgcaaaacaacctatgcaaataaataatctttaaagtattattcataagtttgtcaatgtagtttaagaaataacagtttgt 23119931  T
Q  203 aaatatacaattttcgttcgt 223  Q
     || |||||||||| ||||||    
T  23119930 gaagatacaatttttgttcgt 23119910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 265
Target Start/End: Original strand, 30181560 - 30181688
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    |||||||| |||  || |||||||||| ||||| |||| ||  ||| |||| ||||||||  |||| || ||||  ||||| || ||  || | ||||||    
T  30181560 caaataaagaagcttttatgtattattcataagcttgtcaaggtagtttatcaaaaaacagcttatgaagatactgttttcattagtgggaacttatgaa 30181659  T
Q  237 ttaacataaaggcttaattatttgcataa 265  Q
    |||||||||| ||||| ||||||||||||    
T  30181660 ttaacataaaagcttatttatttgcataa 30181688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 47582620 - 47582561
Alignment:
Q  157 tattatttataagtttgttaaa-atagcttatgaaaaaacaatttataaatatacaatttt 216  Q
    |||||||||||||||||||||| |||| |||||  |||||||||||| || ||||||||||    
T  47582620 tattatttataagtttgttaaagatagtttatg-gaaaacaatttatgaagatacaatttt 47582561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 7e-38; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 102 - 266
Target Start/End: Original strand, 4974286 - 4974450
Alignment:
Q  102 tggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattta 201  Q
    |||||||||||||| ||||||||||||||| ||| |||||||||||| | |||||||||||||||||  ||| |||  ||| |||||||||||||| |||    
T  4974286 tggcttattttagagcttatgcaaagcagcttatgcaaataaataagcactaatgtattatttataaacttgctaaggtagtttatgaaaaaacaagtta 4974385  T
Q  202 taaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    | |||||||||| || ||| |||  ||| |||||||||||||||| ||||| |||||||||||||    
T  4974386 tgaatatacaatatttgttggtaaaatcttatgaattaacataaaagcttatttatttgcataag 4974450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 38524098 - 38524227
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    |||||||||||||||||||||||||||||||| ||||||||  ||| |||||||||||  |||||| ||||| ||||||||||| ||| |||| ||||||    
T  38524098 caaataaataagtattaatgtattatttataaatttgttaaggtagtttatgaaaaaatcatttatgaatatgcaattttcgttagtaagatcttatgaa 38524197  T
Q  237 ttaacataaaggcttaattatttgcataag 266  Q
    |||||||||| ||||| |||||||||||||    
T  38524198 ttaacataaaagcttatttatttgcataag 38524227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 145 - 266
Target Start/End: Complemental strand, 20175008 - 20174887
Alignment:
Q  145 taagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacata 244  Q
    |||| |||||||||||||||||||  ||| |||  ||| |||||||||||||| |||| ||||||||||||||||| ||| |||| ||||||||| ||||    
T  20175008 taagcattaatgtattatttataaacttgctaagttagtttatgaaaaaacaacttatgaatatacaattttcgttagtaagatcttatgaattagcata 20174909  T
Q  245 aaggcttaattatttgcataag 266  Q
    || ||||| |||||||||||||    
T  20174908 aaagcttatttatttgcataag 20174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 133 - 268
Target Start/End: Complemental strand, 45049454 - 45049319
Alignment:
Q  133 tatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcata 232  Q
    |||||||||||| ||| |||||| |||| ||||||||||||||||  ||| |||||| ||||||| ||||||||||| ||||||| ||  || ||| |||    
T  45049454 tatacaaataaacaagcattaatatattgtttataagtttgttaaggtagtttatgacaaaacaacttataaatataaaattttcattaataagatgata 45049355  T
Q  233 tgaattaacataaaggcttaattatttgcataagtt 268  Q
    ||||||||||||||   ||| |||||| ||||||||    
T  45049354 tgaattaacataaaaatttatttatttacataagtt 45049319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 48816758 - 48816875
Alignment:
Q  170 tttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagttc 269  Q
    ||||||||  ||| ||| ||| |||||| |||| ||||||||||||||||| ||| |||| ||| ||||||| |||| ||||| ||||||||||||| ||    
T  48816758 tttgttaaggtagtttaagaataaacaacttatgaatatacaattttcgttggtaagatcttataaattaacttaaaagcttatttatttgcataagctc 48816857  T
Q  270 aatccaaacgtgccctaa 287  Q
    |||||||||  |||||||    
T  48816858 aatccaaacaggccctaa 48816875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 108 - 265
Target Start/End: Original strand, 30383749 - 30383903
Alignment:
Q  108 attttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaata 207  Q
    |||||||| ||||||||||  ||  ||| | |||||| ||| |||||||| |||||||||| ||||||||  ||| ||||||||||||||  ||| ||||    
T  30383749 attttagagcttatgcaaaatagtttatgcgaataaagaagcattaatgtgttatttataaatttgttaaggtagtttatgaaaaaacaacctatgaata 30383848  T
Q  208 tacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataa 265  Q
    |||||||||| |  ||   ||| ||||||||||||||||  |||| ||||||||||||    
T  30383849 tacaattttcataagt---atcttatgaattaacataaaaacttatttatttgcataa 30383903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 105 - 279
Target Start/End: Complemental strand, 1516205 - 1516032
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||||| ||||| ||||  | | ||| |||||||||||  ||| ||||||||||||||||||||||||  ||  ||||| |||| || |||||||    
T  1516205 cttattttagagcttatacaaaataacttattcaaataaataac-atttatgtattatttataagtttgttaaggtattttatggaaaatcagtttataa 1516107  T
Q  205 atatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagttcaatccaaacg 279  Q
    | ||||||||||| || ||  || | ||| |||||| |||||  |||| |||||| |||||| ||||||||||||    
T  1516106 agatacaattttcattagtgagaacttataaattaaaataaaaacttatttatttacataagctcaatccaaacg 1516032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 29614172 - 29614286
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||||| |||||  ||| |||| |||  |||||||||||| || ||||||||||||||| ||| ||||  ||| ||||||||||||| ||||| |    
T  29614172 cttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatgaaaaaacagtttatga 29614270  T
Q  205 atatacaattttcgtt 220  Q
    | ||||||||||||||    
T  29614271 agatacaattttcgtt 29614286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 42956255 - 42956124
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||| || |||||||||| ||||  ||||  || ||| |||||| ||||||  ||||||| |||||||||||||| ||  || | ||| ||    
T  42956255 caaataaataagtttttatgtattattcataaacttgtcgaagtagtttatgataaaacagcttataaagatacaattttcgttagtgagaacttataaa 42956156  T
Q  237 ttaacataaaggcttaattatttgcataagtt 268  Q
    ||||||||||  |||| |||||||||||||||    
T  42956155 ttaacataaaaacttatttatttgcataagtt 42956124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 202
Target Start/End: Original strand, 10448751 - 10448849
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttat 202  Q
    |||||||||||| |||||||||| || | ||| |||||||||| |  || |||||||||||||||| |||||||  ||| ||||||||||||| |||||    
T  10448751 gcttattttagagcttatgcaaaacaacttatgcaaataaatatgcctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttat 10448849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 37456508 - 37456431
Alignment:
Q  138 aaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaatttt 216  Q
    |||||||||| | || ||||||||||||||||||| |||| |||| ||||||||||| |||||||||| ||||||||||    
T  37456508 aaataaataaatttttatgtattatttataagttt-ttaagatagtttatgaaaaaataatttataaagatacaatttt 37456431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 51662800 - 51662877
Alignment:
Q  123 caaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattt 200  Q
    |||| |||| |||||||||| ||||  |||||||||||||||||||| ||||||| |||| ||||||||||| |||||    
T  51662800 caaaacagcttatacaaatagataaacattaatgtattatttataagcttgttaagatagtttatgaaaaaataattt 51662877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 3645280 - 3645395
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||  ||| |||| |||  |||||||||||| || ||||||||||||||| ||| ||||  ||| ||||||||||||| || ||     
T  3645280 gcttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatgaaaaaacagttcatg 3645378  T
Q  204 aatatacaattttcgtt 220  Q
    || ||||||||||||||    
T  3645379 aagatacaattttcgtt 3645395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 154 - 266
Target Start/End: Complemental strand, 45331354 - 45331242
Alignment:
Q  154 atgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaa 253  Q
    |||||||||  ||||| ||||||| | || |||||||||||||  |||| || |||||||||||| | | | || |||||||||||||||||| | |||     
T  45331354 atgtattatgcataagcttgttaagacagtttatgaaaaaacatcttatgaagatacaattttcgctagcaagaacatatgaattaacataaaagtttat 45331255  T
Q  254 ttatttgcataag 266  Q
    |||||||||||||    
T  45331254 ttatttgcataag 45331242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 30473224 - 30473145
Alignment:
Q  132 atatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatataca 211  Q
    |||| |||||||||||  |||||||||||||||||||| |||||||  ||| |||||||||||||| |||| ||| ||||    
T  30473224 atatgcaaataaataaacattaatgtattatttataaggttgttaaggtagtttatgaaaaaacaacttatgaatgtaca 30473145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 266
Target Start/End: Original strand, 37243490 - 37243605
Alignment:
Q  151 ttaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggct 250  Q
    ||||||||||||||||||| |||||||  ||| ||||||||||| | ||||| ||  |||| ||||| || ||  || | |||||||||| ||||| |||    
T  37243490 ttaatgtattatttataagcttgttaacgtagtttatgaaaaaatagtttatgaaggtacacttttcattggtgagaacttatgaattaagataaaagct 37243589  T
Q  251 taattatttgcataag 266  Q
    || |||||||||||||    
T  37243590 tacttatttgcataag 37243605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 246
Target Start/End: Complemental strand, 28741323 - 28741181
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    ||||||||||||  | ||||||| |||| ||| ||||||||||    || |||||||| ||||||| |||||||| ||| |||||||||||||  ||||     
T  28741323 gcttattttagagttcatgcaaaacagcttatgcaaataaatattcctttatgtattacttataagcttgttaaagtagtttatgaaaaaacagattatg 28741224  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaa 246  Q
    ||  ||||||||||||| ||  || | |||||||||| |||||    
T  28741223 aaggtacaattttcgttagtgagaacttatgaattaagataaa 28741181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 40240606 - 40240524
Alignment:
Q  184 ttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    |||||||||||||| |||| || |||||||||||||| ||  || | |||||||||| ||||| ||||| |||||||||||||    
T  40240606 ttatgaaaaaacaacttatgaagatacaattttcgttagtgagagcttatgaattaagataaaagcttatttatttgcataag 40240524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 138 - 220
Target Start/End: Complemental strand, 43971922 - 43971840
Alignment:
Q  138 aaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgtt 220  Q
    |||||||||||  || || ||||||| | |||||||||||||||| |||||| |||||||||||| || ||| ||||||||||    
T  43971922 aaataaataagcttttatttattattcacaagtttgttaaaatagtttatgagaaaacaatttatgaagataaaattttcgtt 43971840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 218
Target Start/End: Complemental strand, 4257410 - 4257295
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatg--aaaaaacaattta 201  Q
    |||||||||||| |||||  ||| || | ||| ||||||||||||| || ||||||||||||||||||| ||||  ||| |||||  |||||||| ||||    
T  4257410 gcttattttagagcttatataaaacaacttatgcaaataaataagtttttatgtattatttataagttt-ttaaggtagtttatgaaaaaaaacagttta 4257312  T
Q  202 taaatatacaattttcg 218  Q
    | || ||||||||||||    
T  4257311 tgaagatacaattttcg 4257295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 24841496 - 24841423
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaa 177  Q
    |||||||||||| ||||||||||||| | ||  ||||||||||||| |  || |||||||||||||||||||||    
T  24841496 gcttattttagagcttatgcaaagcaacttaagcaaataaataagtttgtatatattatttataagtttgttaa 24841423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 20894480 - 20894595
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||  ||| |||| |||  |||||||||||| || ||||||||||||||| ||| ||||  ||| || |||||||||| || ||     
T  20894480 gcttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataa-ttttttaatgtagtttttgaaaaaacagttcatg 20894578  T
Q  204 aatatacaattttcgtt 220  Q
    || ||||||||||||||    
T  20894579 aagatacaattttcgtt 20894595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 268
Target Start/End: Complemental strand, 47403843 - 47403707
Alignment:
Q  133 tatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatg-aaaaaacaatttataaatatacaattttcgttcgtacgatcat 231  Q
    ||||||||||||||||| || | |||||||| |||| ||||| ||  ||| ||||| |||||| ||||||| || |||||||||||||| ||  |  | |    
T  47403843 tatacaaataaataagtttttaggtattattcataaatttgtaaatgtagtttatgcaaaaaataatttatgaagatacaattttcgtttgtgagggctt 47403744  T
Q  232 atgaattaacataaaggcttaattatttgcataagtt 268  Q
    || ||||||||||||   ||| |||||||||||||||    
T  47403743 ataaattaacataaaaatttatttatttgcataagtt 47403707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 278
Target Start/End: Original strand, 19307978 - 19308091
Alignment:
Q  164 tataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcat 263  Q
    ||||||||||||||  ||| ||||||||||||||  ||| ||||||||||||| ||| |||  ||| ||||||||| || |||  ||||||||||| |||    
T  19307978 tataagtttgttaaggtagtttatgaaaaaacaacctatgaatatacaatttttgttagtaaaatcttatgaattagca-aaaaacttaattatttacat 19308076  T
Q  264 aagttcaatccaaac 278  Q
    | | |||| ||||||    
T  19308077 aggctcaaaccaaac 19308091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 262
Target Start/End: Complemental strand, 22809302 - 22809144
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataag-tattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||| ||  ||||||||| |||| ||| |||||||||||| | || || ||||||| ||||| |||| ||  ||| ||||||||||||   ||||     
T  22809302 cttatttttgaggttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaaggtagtttatgaaaaaactgcttatg 22809203  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgca 262  Q
    || ||||||||||||||   | || | ||||||||||||||||  |||| |||||||||    
T  22809202 aagatacaattttcgttaagaagaacttatgaattaacataaaaacttatttatttgca 22809144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 266
Target Start/End: Complemental strand, 40581173 - 40581023
Alignment:
Q  117 cttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaa-caatttataaatatacaattt 215  Q
    |||||||||| || | ||| ||||||||||||  || |||||||||| ||||| |||| ||  ||| ||||||||||| ||   ||| || | |||||||    
T  40581173 cttatgcaaaacaacttatgcaaataaataagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaaacagcgtatgaagaaacaattt 40581074  T
Q  216 tcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    ||||| ||  || | ||||||||||||||||  |||| |||||||||||||    
T  40581073 tcgttagtgagaacttatgaattaacataaaatcttatttatttgcataag 40581023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 7292659 - 7292755
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttat 202  Q
    |||||||| ||||||||| |||||| | ||| |||||| |||||   | |||||||||| |||||||||| || |||| ||||||||||||| |||||    
T  7292659 cttatttt-gaacttatgtaaagcaacttatgcaaatacataagctcttatgtattattcataagtttgtcaatatagtttatgaaaaaacagtttat 7292755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 105 - 190
Target Start/End: Complemental strand, 29830878 - 29830793
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaa 190  Q
    ||||||||||| ||||| |||| |||  ||| ||||||||||||| || ||||||||| |||| |||||||||  ||| |||||||    
T  29830878 cttattttagagcttatacaaaacagtttatgcaaataaataagtttttatgtattatctatatgtttgttaaggtagtttatgaa 29830793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 266
Target Start/End: Complemental strand, 53787811 - 53787699
Alignment:
Q  154 atgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaa 253  Q
    |||||||| ||||||| || |||| |||| ||| ||||||||| |||||||| ||| |||||| |||  |  || | |||||||||| |||||  ||||     
T  53787811 atgtattacttataagctttttaatatagtttacgaaaaaacagtttataaagatataatttttgttattgagaacttatgaattaagataaaaacttat 53787712  T
Q  254 ttatttgcataag 266  Q
    |||||||||||||    
T  53787711 ttatttgcataag 53787699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 29270339 - 29270454
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    |||||||| || |||||||||| || | ||||  ||||||||||  || |||||||||| ||||| || | || |||  |||||||||||||  |||| |    
T  29270339 cttatttttgagcttatgcaaaacaacttataggaataaataagcttttatgtattattcataagcttttcaagataatttatgaaaaaacagcttatga 29270438  T
Q  205 atatacaattttcgtt 220  Q
    | ||||||||||||||    
T  29270439 agatacaattttcgtt 29270454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 43376719 - 43376786
Alignment:
Q  151 ttaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcg 218  Q
    ||||||||||||||||||| |||||||  ||| |||||| ||||  |||||||||  |||||||||||    
T  43376719 ttaatgtattatttataagcttgttaatgtagtttatgataaaattatttataaaggtacaattttcg 43376786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 53218136 - 53218033
Alignment:
Q  117 cttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaatttt 216  Q
    |||||||||| || | ||| | ||||||||||  || |||||||||| ||||| |||| ||  ||| |||||||||||||| || | || ||||||||||    
T  53218136 cttatgcaaaacaacttatgcgaataaataagattttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttttgaagatacaatttt 53218037  T
Q  217 cgtt 220  Q
    ||||    
T  53218036 cgtt 53218033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 30499944 - 30500010
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtt 171  Q
    ||||||||||| ||||| |||| |||  ||| ||||||||||| | || ||||||||||||||||||    
T  30499944 cttattttagagcttatacaaaacagtttatgcaaataaataaatttttatgtattatttataagtt 30500010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 3845956 - 3845993
Alignment:
Q  229 catatgaattaacataaaggcttaattatttgcataag 266  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  3845956 catatgaattaacataaaagcttatttatttgcataag 3845993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 177
Target Start/End: Original strand, 36266221 - 36266294
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaa 177  Q
    |||||||||||| |||||  ||| |||  ||| |||||||||||   || ||||||||||||||||||||||||    
T  36266221 gcttattttagagcttatataaaacagtttatgcaaataaataaacttttatgtattatttataagtttgttaa 36266294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 214
Target Start/End: Complemental strand, 2086802 - 2086690
Alignment:
Q  102 tggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattta 201  Q
    |||||||||||||| ||||||| || |||| |||  ||||||||||   || |||||||||||||||  |||| ||  | | ||||||||||| | ||||    
T  2086802 tggcttattttagagcttatgctaaacagcttatgtaaataaataaacttttatgtattatttataatcttgtaaaggtggtttatgaaaaaatagttta 2086703  T
Q  202 taaatatacaatt 214  Q
    | || ||||||||    
T  2086702 tgaagatacaatt 2086690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1088 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 1272 - 1398
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||||| |||||||||| || | ||| ||||| |||||| |||||| |||||||||||||||||||||  ||| |||||||||||||| ||||||    
T  1272 cttattttagagcttatgcaaaacaacttatgcaaatgaataaggattaatatattatttataagtttgttaaggtagtttatgaaaaaacaagttataa 1371  T
Q  205 atatacaattttcgttcgtacgatcat 231  Q
    |||||||||||||||| ||| ||||||    
T  1372 atatacaattttcgttagtaagatcat 1398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 4e-30; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 102 - 261
Target Start/End: Original strand, 24438994 - 24439153
Alignment:
Q  102 tggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattta 201  Q
    |||||||||||||| ||||||||||||| ||||| |||||| ||||  |||||||||||||||||||  ||||||   ||| |||||||||||||| |||    
T  24438994 tggcttattttagagcttatgcaaagcaacatatgcaaatatataaacattaatgtattatttataatcttgttacggtagtttatgaaaaaacaactta 24439093  T
Q  202 taaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgc 261  Q
    |||| |||||||||| |||  || |||| ||| |||||| ||||| ||||||| ||||||    
T  24439094 taaacatacaatttttgttaataagatcttataaattaagataaatgcttaataatttgc 24439153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 137 - 265
Target Start/End: Complemental strand, 12238559 - 12238434
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    |||||||||||| |||||||||||||||||||| |||||||  ||| ||||||||||||   |||| || |||||||||||||| ||| |||| ||||||    
T  12238559 caaataaataagcattaatgtattatttataagcttgttaaggtagtttatgaaaaaac---ttatgaacatacaattttcgttagtaagatcttatgaa 12238463  T
Q  237 ttaacataaaggcttaattatttgcataa 265  Q
    |||||||||| |||||||||||| |||||    
T  12238462 ttaacataaatgcttaattattttcataa 12238434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 118 - 268
Target Start/End: Original strand, 21788448 - 21788598
Alignment:
Q  118 ttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttc 217  Q
    ||||||||| || | ||| ||||||||||||  || || ||||||| ||||| ||||||| |||| |||||||||||||| |||| || ||| |||||||    
T  21788448 ttatgcaaaacatcttatgcaaataaataagcttttatttattattcataagcttgttaagatagtttatgaaaaaacaacttatgaagataaaattttc 21788547  T
Q  218 gttcgtacgatcatatgaattaacataaaggcttaattatttgcataagtt 268  Q
    ||| ||  || | |||||||||| ||||| ||||| |||||||||||||||    
T  21788548 gttagtgagagcttatgaattaatataaaagcttatttatttgcataagtt 21788598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 157 - 266
Target Start/End: Complemental strand, 16108178 - 16108069
Alignment:
Q  157 tattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaatta 256  Q
    |||||||||||||||||||||  ||| |||||||||||||| |||| ||||||||||||| |||  |   ||| |||||||||||||||| |||||||||    
T  16108178 tattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaatttttgttaattaaatcttatgaattaacataaacgcttaatta 16108079  T
Q  257 tttgcataag 266  Q
    ||| ||||||    
T  16108078 tttacataag 16108069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 27881106 - 27881008
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttat 202  Q
    |||||||||||| ||||||||||  ||| ||| |||||||||| ||  | ||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  27881106 gcttattttagagcttatgcaaaatagcttatgcaaataaatatgttattatgtattatttataagtttattaaggtagcttatgaaaaaacaatttat 27881008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 34913486 - 34913397
Alignment:
Q  117 cttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaat 206  Q
    |||||||||| |||| ||| ||||||||||||  || |||||||||| ||||||||||||| |||| |||||||||||||| ||||||||    
T  34913486 cttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgttaagatagtttatgaaaaaacaacttataaat 34913397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 264
Target Start/End: Complemental strand, 12950138 - 12950064
Alignment:
Q  190 aaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcata 264  Q
    |||||||| |||| |||||| |||||||||| ||| |||| |||||||||||||||| |||||||||||||||||    
T  12950138 aaaaacaacttatgaatatagaattttcgttagtaagatcttatgaattaacataaaagcttaattatttgcata 12950064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 266
Target Start/End: Original strand, 4026901 - 4027064
Alignment:
Q  102 tggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattta 201  Q
    ||||||||||| || |||||||||| | || ||| ||||||||||||  || |||||||||  ||||| |||| ||  ||| |||||||||||||  |||    
T  4026901 tggcttatttttgagcttatgcaaaactgcttatgcaaataaataagcttttatgtattatc-ataagcttgtcaaggtagtttatgaaaaaacagctta 4026999  T
Q  202 taaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    | || |||||||||| ||| ||  || | |||||||||||||||  ||||| |||||||||||||    
T  4027000 tgaagatacaatttttgttagtgagaacttatgaattaacataatagcttatttatttgcataag 4027064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 190
Target Start/End: Original strand, 8441456 - 8441536
Alignment:
Q  110 tttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaa 190  Q
    |||||| ||||||||||||||| ||| |||||||||| || || ||||||||||||||||||||||||  ||| |||||||    
T  8441456 tttagagcttatgcaaagcagcttatgcaaataaatatgtttttatgtattatttataagtttgttaatgtagtttatgaa 8441536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 266
Target Start/End: Original strand, 32366127 - 32366288
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||  |||  | | ||| ||||||||||||| || ||||||||||||||||||| | ||  ||| ||||||||||||| |||||     
T  32366127 gcttattttagagcttatataaaataacttatgcaaataaataagtttttatgtattatttataagttt-taaaggtagtttatgaaaaaacagtttatg 32366225  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    ||||||| ||||||||| ||| || | ||| || ||| | ||| ||||| |||||| ||||||    
T  32366226 aatatacgattttcgttagtaagagcttataaaataaaacaaaagcttatttatttacataag 32366288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 43796941 - 43797003
Alignment:
Q  138 aaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaattt 200  Q
    ||||||||||||||||||||||||||||||||||||||||  ||| ||||||| | |||||||    
T  43796941 aaataaataagtattaatgtattatttataagtttgttaaggtagtttatgaatatacaattt 43797003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 106 - 266
Target Start/End: Complemental strand, 32522152 - 32521993
Alignment:
Q  106 ttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaa 205  Q
    |||||||||| |||||  ||| |||| |||  |||||||||||| || ||||||||||||||| ||| ||||  ||| ||||||||||||| || || ||    
T  32522152 ttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatgaaaaaacagttcatgaa 32522054  T
Q  206 tatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
     |||||||||||||| ||| || | ||| |||||| ||| |  |||| |||||| ||||||    
T  32522053 gatacaattttcgttagtaagagcttataaattaaaatataaacttatttatttacataag 32521993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 196
Target Start/End: Complemental strand, 2757177 - 2757088
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaaca 196  Q
    ||||||||||| |||||  ||| |||| ||| ||||||||||||| || ||||||||||||||||||| ||||| ||| |||||||||||||    
T  2757177 cttattttagagcttatataaaacagcttatgcaaataaataagt-tttatgtattatttataagttt-ttaaagtagtttatgaaaaaaca 2757088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 154 - 271
Target Start/End: Original strand, 5516102 - 5516220
Alignment:
Q  154 atgtattatttataagtttgttaaaatagcttatgaaaaaa-caatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggctta 252  Q
    |||| ||||| |||||||||| ||  ||| ||||||||||| || |||||||| |||||||||||||| ||  || | ||| |||||||| ||| |||||    
T  5516102 atgtgttattcataagtttgtaaatgtagtttatgaaaaaaacagtttataaaaatacaattttcgttagtgagagcttataaattaacacaaaagctta 5516201  T
Q  253 attatttgcataagttcaa 271  Q
     ||||||||||||| ||||    
T  5516202 tttatttgcataagctcaa 5516220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 266
Target Start/End: Complemental strand, 33321388 - 33321259
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||  || |||| ||||| ||||| |||| ||  ||| |||||||||||||  |||| || |||||||||| ||| ||  || | | ||||    
T  33321388 caaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagagcttgtgaa 33321289  T
Q  237 ttaacataaaggcttaattatttgcataag 266  Q
    |||||||||||| ||| |||||||||||||    
T  33321288 ttaacataaaggtttatttatttgcataag 33321259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 38216001 - 38216158
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    |||||||| || |||||||||| |||| ||| ||||||||||| |||    |||||||| ||||| |||| ||  ||| ||| ||||||| |   ||| |    
T  38216001 cttatttttgagcttatgcaaaacagcttatgcaaataaataattat----gtattattcataagcttgtcaaggtagtttaggaaaaaatagcatatga 38216096  T
Q  205 atatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    | |||||||||||||| ||  || | ||||| |||||||||| ||||| |||||||||||||    
T  38216097 agatacaattttcgttagtgagaacttatgagttaacataaaagcttatttatttgcataag 38216158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 40301329 - 40301397
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagttt 172  Q
    |||||||||||| |||||  ||| |||| ||| ||||||||||||| || |||||||||||||||||||    
T  40301329 gcttattttagagcttataaaaaacagcttatgcaaataaataagtttttatgtattatttataagttt 40301397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 271
Target Start/End: Original strand, 42064881 - 42064995
Alignment:
Q  157 tattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaatta 256  Q
    ||||||| ||||| |||||||  ||| |||| |||||| || |||| || |||  ||||||||| ||| || | |||||||||| ||||| ||||| |||    
T  42064881 tattattcataagcttgttaaggtagtttataaaaaaataacttatgaagatatcattttcgttagtaagaacttatgaattaatataaaagcttattta 42064980  T
Q  257 tttgcataagttcaa 271  Q
    |||||||||| ||||    
T  42064981 tttgcataagctcaa 42064995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 266
Target Start/End: Complemental strand, 23956312 - 23956211
Alignment:
Q  165 ataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcata 264  Q
    |||||||||| ||  ||| ||||| ||||||| |||||||| ||||||||||||||  |  || | ||| ||||||||||||  |||| |||||||||||    
T  23956312 ataagtttgtaaatgtagtttatggaaaaacagtttataaagatacaattttcgttaatgagaacttataaattaacataaaaacttatttatttgcata 23956213  T
Q  265 ag 266  Q
    ||    
T  23956212 ag 23956211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 266
Target Start/End: Complemental strand, 36501583 - 36501462
Alignment:
Q  145 taagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacata 244  Q
    ||||| || |||||||||| ||||| |||| ||  ||| |||||||||||||  |||| || ||| ||||| |||| ||  || |  |||||||||||||    
T  36501583 taagtttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataaaatttgcgttagtgagaactcatgaattaacata 36501484  T
Q  245 aaggcttaattatttgcataag 266  Q
    || ||||| |||||||||||||    
T  36501483 aaagcttatttatttgcataag 36501462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 245
Target Start/End: Complemental strand, 38471900 - 38471759
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    ||||||||| || |||||||||| |||| ||| |||||||||| |  || |||| |||| |||||| || || |  ||| ||||||||||||| |||||     
T  38471900 gcttattttcgagcttatgcaaaacagcttatgcaaataaatatgcttttatgtgttatgtataagcttcttgatgtagtttatgaaaaaacagtttatg 38471801  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataa 245  Q
    ||  ||||||||||||| ||  || | |||||||||| ||||    
T  38471800 aaggtacaattttcgttagtgagaacttatgaattaagataa 38471759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 261
Target Start/End: Original strand, 29774755 - 29774879
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    |||||||||||   || ||| |||||| || ||||||||||  ||| ||||||||||||   |||| || |||||||||||||| ||  || | ||||||    
T  29774755 caaataaataaacttttatgcattattcattagtttgttaaggtagtttatgaaaaaacggcttatgaaaatacaattttcgttagtgagaacttatgaa 29774854  T
Q  237 ttaacataaaggcttaattatttgc 261  Q
    ||||| |||| ||||| ||||||||    
T  29774855 ttaacgtaaaagcttatttatttgc 29774879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 190
Target Start/End: Complemental strand, 35515591 - 35515503
Alignment:
Q  102 tggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaa 190  Q
    |||||||||||||| |||||| ||| |||  ||   ||||||||| || || ||||||||||||||||||||||||  ||| |||||||    
T  35515591 tggcttattttagagcttatgtaaaacagtttacgtaaataaatatgtctttatgtattatttataagtttgttaatgtagtttatgaa 35515503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 16108570 - 16108511
Alignment:
Q  106 ttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattattta 165  Q
    ||||||||||  ||||| |||||| | ||| |||||||||||| ||||||||||||||||    
T  16108570 ttattttagagtttatgtaaagcaacttatgcaaataaataagcattaatgtattattta 16108511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 43787883 - 43787800
Alignment:
Q  133 tatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaatttt 216  Q
    |||||||||||||||   || |||||||||| ||||  ||||| |  |||||||||||||||||| |||| || ||||||||||    
T  43787883 tatacaaataaataaacttttatgtattattcataaacttgtttaggtagcttatgaaaaaacaacttatgaagatacaatttt 43787800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 8832514 - 8832596
Alignment:
Q  184 ttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    ||||||||| |||  ||| ||| |||||||||||||| ||   | | |||||||||||||||| ||||| |||||||||||||    
T  8832514 ttatgaaaacacaggttagaaagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttgcataag 8832596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 266
Target Start/End: Complemental strand, 25836803 - 25836660
Alignment:
Q  122 gcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttc 221  Q
    ||||| |||| ||| |||||||||| |  || |||||||||| ||||| |||| ||  ||| ||||||||||||   |||| || | |||||| |||||     
T  25836803 gcaaaacagcttatgcaaataaatatgcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacggcttatgaagacacaattatcgtta 25836704  T
Q  222 gtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    ||  || | |||||| ||||||||| ||||| |||||||||||||    
T  25836703 gtgagaacttatgaa-taacataaaagcttatttatttgcataag 25836660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 139 - 262
Target Start/End: Original strand, 227718 - 227842
Alignment:
Q  139 aataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaa-caatttataaatatacaattttcgttcgtacgatcatatgaat 237  Q
    |||||||||| ||||||||| ||||||||||||||||||  ||| ||||||||||| ||  |||| ||||||||||||||||| ||| |||| |||||||    
T  227718 aataaataagcattaatgtagtatttataagtttgttaaggtagtttatgaaaaaaacagcttatgaatatacaattttcgttagtaagatcttatgaat 227817  T
Q  238 taacataaaggcttaattatttgca 262  Q
    ||||||||| |||||||| ||||||    
T  227818 taacataaaagcttaattctttgca 227842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 102 - 266
Target Start/End: Complemental strand, 8011157 - 8010992
Alignment:
Q  102 tggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatg--aaaaaacaatt 199  Q
    |||||||||||||| |||||| | || |||  ||  ||||||||||| |||||| |||||||||||||||||| ||  ||| || ||  |||||| || |    
T  8011157 tggcttattttagagcttatgtacagtagctaatgaaaataaataagcattaatatattatttataagtttgtcaaggtagtttttgaaaaaaaaaaact 8011058  T
Q  200 tataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    ||| ||||||||||||||||| ||| |||| |||||| ||||||||| |||||||||||||||||||    
T  8011057 tatgaatatacaattttcgttagtaagatcttatgaa-taacataaaagcttaattatttgcataag 8010992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 105 - 256
Target Start/End: Original strand, 10619207 - 10619360
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||||| |||||| |||||||| ||| |||||||||  | ||||||||||||||| ||||||||||||  ||| |||||||||||||| |||| |    
T  10619207 cttattttagagcttatgtaaagcagcttatgcaaataaat--gcattaatgtattatttgtaagtttgttaaggtagtttatgaaaaaacaacttatga 10619304  T
Q  205 atatac----aattttcgttcgtacgatcatatgaattaacataaaggcttaatta 256  Q
    ||||||    || ||||||| ||| |||| ||||||||||||||||  ||||||||    
T  10619305 atatacaaataaatttcgttagtaagatcttatgaattaacataaaaacttaatta 10619360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 259
Target Start/End: Complemental strand, 10184438 - 10184284
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||  ||| |||| |||  |||||||||||| || || |||||||||||||||| ||||  ||| |||||||||||||||||||     
T  10184438 gcttattttagagcttatataaaacagcttatgtaaataaataagtttttatctattatttataagttt-ttaaggtagtttatgaaaaaacaatttatg 10184340  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattattt 259  Q
    || | |||||||||||| ||| || | ||| |||||| ||||| ||||| ||||||    
T  10184339 aagaaacaattttcgttagtaagagcttataaattaaaataaaagcttatttattt 10184284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 268
Target Start/End: Complemental strand, 32615522 - 32615360
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||| | |||||  ||| |||| ||| ||||||||||||| || ||||||||||||||| ||| ||||  ||| | |||||||||| |||||| |    
T  32615522 cttattttatagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataaattt-ttaaggtagttgatgaaaaaactatttatga 32615424  T
Q  205 atatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagtt 268  Q
    | |||||||||||||| ||  || ||||| |||||| ||||| ||||| |||||| ||||||||    
T  32615423 agatacaattttcgttagtgagagcatataaattaaaataaaagcttacttatttacataagtt 32615360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 111 - 265
Target Start/End: Complemental strand, 21610151 - 21609997
Alignment:
Q  111 ttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatac 210  Q
    ||||| |||||||||| |||| ||| ||||||||||  | || ||| |||||||||||| |||||||  ||| ||||||||||| | ||||| ||||||     
T  21610151 ttagagcttatgcaaaacagcttatgcaaataaatatttctttatgaattatttataagcttgttaatgtagtttatgaaaaaatagtttatgaatatat 21610052  T
Q  211 aattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataa 265  Q
    |||||||||| ||| || | ||| |||||| |||||  |||| ||||||||||||    
T  21610051 aattttcgttagtaagaacttataaattaaaataaaaacttatttatttgcataa 21609997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 4808549 - 4808664
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||  ||| |||| ||| ||||||||| ||| || ||||||||||||||||||| |||| |||| ||||||||||||| |||||     
T  4808549 gcttattttagagcttatataaaacagcttatgcaaataaatgagttttcatgtattatttataagttt-ttaagatagtttatgaaaaaacagtttatg 4808647  T
Q  204 aatatacaattttcgtt 220  Q
    || ||||||| ||||||    
T  4808648 aagatacaatattcgtt 4808664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 137 - 266
Target Start/End: Complemental strand, 2034305 - 2034176
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||  || ||||||||||||||||||||| ||  ||| |||||||||||||| |||  || |||||||||||||  |||  | | |||||     
T  2034305 caaataaataagcttttatgtattatttataagtttgtcaaggtagtttatgaaaaaacaacttaccaagatacaattttcgtaagtaataacttatgat 2034206  T
Q  237 ttaacataaaggcttaattatttgcataag 266  Q
    | |||||||| ||||| |||||||||||||    
T  2034205 tcaacataaaagcttatttatttgcataag 2034176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 266
Target Start/End: Complemental strand, 32165335 - 32165208
Alignment:
Q  138 aaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaat 237  Q
    |||||||||||| || ||||||||||||||| ||| ||||| ||| ||||||||||||| ||||| || |||||||||||||| ||  || | ||| |||    
T  32165335 aaataaataagtttttatgtattatttataatttt-ttaaagtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgagagcttataaat 32165237  T
Q  238 taacataaaggcttaattatttgcataag 266  Q
    ||| |||||  |||| |||||| ||||||    
T  32165236 taaaataaaaacttatttatttacataag 32165208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 266
Target Start/End: Complemental strand, 21891443 - 21891285
Alignment:
Q  108 attttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaata 207  Q
    ||||| || |||||||| |  ||| ||| ||||||||||||| || || ||||||| ||||| |||| ||  ||| |||||||| ||||| |||| || |    
T  21891443 atttttgagcttatgcagaatagcttatgcaaataaataagttttgatatattattcataagcttgtcaatgtagtttatgaaataacaacttatgaaga 21891344  T
Q  208 tacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    || |||||||||||| | || | |||||||||||||||| ||||| | ||| |||||||    
T  21891343 tagaattttcgttcgcaagaacttatgaattaacataaaagcttattcattcgcataag 21891285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 216
Target Start/End: Original strand, 34413346 - 34413408
Alignment:
Q  154 atgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaatttt 216  Q
    ||||||||||||||||||||| ||  ||| |||||||||||||||||||||| ||||||||||    
T  34413346 atgtattatttataagtttgtaaatgtagtttatgaaaaaacaatttataaacatacaatttt 34413408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 266
Target Start/End: Complemental strand, 29623573 - 29623425
Alignment:
Q  117 cttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaatttt 216  Q
    |||||||||| || | ||| |||||||||||   || || |||||||||| ||||||||||  ||| |||||||||||||| |||| || ||| | ||||    
T  29623573 cttatgcaaaacaacttatgcaaataaataaccttttatttattatttatgagtttgttaatgtagtttatgaaaaaacaacttatgaaaataaagtttt 29623474  T
Q  217 cgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    |||| ||  || | ||||||||||||||||  |||| |||||||||||||    
T  29623473 cgttagtgagaacttatgaattaacataaa-tcttatttatttgcataag 29623425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 15054654 - 15054578
Alignment:
Q  144 ataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgtt 220  Q
    |||||| || |||||||| |||||||||||| ||| ||  |||||||||| |||||||| || ||||||||||||||    
T  15054654 ataagttttcatgtattagttataagtttgtaaaagtattttatgaaaaagcaatttatgaagatacaattttcgtt 15054578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 2255744 - 2255875
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||| ||  || |||||| ||| ||||| |||||||  ||  |||||||||||||  |||| || |||||||||| | | ||  || ||||||||    
T  2255744 caaataaatgagcttttatgtatgattcataagcttgttaaggtaatttatgaaaaaacagcttatgaagatacaatttttggtagtgagaacatatgaa 2255843  T
Q  237 ttaacataaaggcttaattatttgcataagtt 268  Q
    |||||||||| ||||| |||||| ||||||||    
T  2255844 ttaacataaaagcttatttatttacataagtt 2255875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 22816661 - 22816578
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgtt 220  Q
    ||||||||||||| || ||||| |||| |||||||| | || |||  ||||||||||||| ||||||| |||||||||| ||||    
T  22816661 caaataaataagtttttatgtaatattcataagtttttaaatataatttatgaaaaaacagtttataagtatacaatttccgtt 22816578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 266
Target Start/End: Original strand, 1468153 - 1468313
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttata 203  Q
    |||||||||||| |||||  |||  ||| ||| ||||||||||||| || |||||||||||||| |||| ||||  ||| ||||| ||||||| |||||     
T  1468153 gcttattttagagcttatataaaatagcttatgcaaataaataagtttttatgtattatttataggttt-ttaaggtagtttatg-aaaaacagtttatg 1468250  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    || | || ||||||||| ||| || | ||| |||||| |||||  |||| |||||| ||||||    
T  1468251 aagaaaccattttcgttagtaagagcttataaattaaaataaaaacttatttatttacataag 1468313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 266
Target Start/End: Complemental strand, 2027261 - 2027123
Alignment:
Q  128 cagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacga 227  Q
    |||| ||| ||||||||||||  || ||| |||||| | |||||||| || | || |||||||||||||  |||| || |||||| ||| ||| ||| ||    
T  2027261 cagcttatgcaaataaataagcttttatgcattattcagaagtttgtcaagacagtttatgaaaaaacagcttatgaagatacaacttttgttagtaaga 2027162  T
Q  228 tcatatgaattaacataaaggcttaattatttgcataag 266  Q
     | |||||||||||||||| | |||  ||||||||||||    
T  2027161 acttatgaattaacataaaagtttatctatttgcataag 2027123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 202
Target Start/End: Original strand, 6632636 - 6632734
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttat 202  Q
    |||||||||||| ||||| |||| || | ||| |||||||||| |  || |||||||||||||||  |||||||  ||| |||||||||||||| ||||    
T  6632636 gcttattttagagcttattcaaaacaacttatgcaaataaatatgcttttatgtattatttataaacttgttaatgtagtttatgaaaaaacaacttat 6632734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 265
Target Start/End: Complemental strand, 10755356 - 10755231
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||  || | |||||||| ||||| |||| ||  || |||||||||||| |  |||| ||   |||||||||||| ||| || | ||||||    
T  10755356 caaataaataagcttttacgtattattcataagcttgtcaaggtaacttatgaaaaaatagcttatgaa---acaattttcgttagtaagaacttatgaa 10755260  T
Q  237 ttaacataaaggcttaattatttgcataa 265  Q
    |||||||||| ||||| ||||||||||||    
T  10755259 ttaacataaaagcttatttatttgcataa 10755231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 34223632 - 34223522
Alignment:
Q  106 ttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaa 205  Q
    ||||||||||||||||  ||| || | |||  |||||||||||| || |||| ||||||||||||||||| | |||   ||| |||||||| ||||| ||    
T  34223632 ttattttagaacttatataaaacaacttatgaaaataaataagtttttatgtgttatttataagtttgtttatatattctataaaaaaacagtttatgaa 34223533  T
Q  206 tatacaatttt 216  Q
     ||||||||||    
T  34223532 gatacaatttt 34223522  T

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Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 157 - 266
Target Start/End: Original strand, 10874014 - 10874123
Alignment:
Q  157 tattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaatta 256  Q
    ||||||| ||||| |||||||  ||| |||||| ||||||  |||| || |||||||||| ||| ||   | | |||||||||||||||| ||||| |||    
T  10874014 tattattaataagcttgttaaggtagtttatgagaaaacagcttatgaagatacaattttagttggtgaaaacttatgaattaacataaaagcttattta 10874113  T
Q  257 tttgcataag 266  Q
    ||||||||||    
T  10874114 tttgcataag 10874123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 265
Target Start/End: Original strand, 16589778 - 16589886
Alignment:
Q  154 atgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaa 253  Q
    |||||||||| |||||||||| |||  || ||||||||||||||||||| || |||  |||||||||  |  || | ||||||||||||||   ||||||    
T  16589778 atgtattattcataagtttgtcaaaggagtttatgaaaaaacaatttatgaagatatgattttcgttattgagaacttatgaattaacata---gcttaa 16589874  T
Q  254 ttatttgcataa 265  Q
    | ||||||||||    
T  16589875 tcatttgcataa 16589886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 265
Target Start/End: Complemental strand, 16605602 - 16605494
Alignment:
Q  154 atgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaa 253  Q
    |||||||||| |||||||||| |||  || ||||||||||||||||||| || |||  |||||||||  |  || | ||||||||||||||   ||||||    
T  16605602 atgtattattcataagtttgtcaaaggagtttatgaaaaaacaatttatgaagatatgattttcgttattgagaacttatgaattaacata---gcttaa 16605506  T
Q  254 ttatttgcataa 265  Q
    | ||||||||||    
T  16605505 tcatttgcataa 16605494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 4272392 - 4272475
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgtt 220  Q
    ||||||||||| | || |||||||||  |||||||| | ||  ||| |||| ||||||||||||||||| | ||||||||||||    
T  4272392 caaataaataactttttatgtattatacataagtttataaatgtagtttataaaaaaacaatttataaagaaacaattttcgtt 4272475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 271
Target Start/End: Original strand, 10054391 - 10054523
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||  || |||||||||| |||||||||| ||  ||| ||||||||||| |||||||| |||  |||||||| || ||  || | ||  ||    
T  10054391 caaataaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaaaataatttatagata--caattttcattagtgggaacttacaaa 10054488  T
Q  237 ttaacataaaggcttaattatttgcataagttcaa 271  Q
    ||| |||||| || || ||||||||||||| ||||    
T  10054489 ttagcataaaagcctatttatttgcataagctcaa 10054523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 10730312 - 10730249
Alignment:
Q  142 aaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaa 205  Q
    |||||| |||| |||||||||||||||  |||||||  ||| ||||||||||||| ||||||||    
T  10730312 aaataaatatttatgtattatttataaacttgttaatgtagtttatgaaaaaacagtttataaa 10730249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 17914924 - 17915038
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataa 204  Q
    ||||||||||| |||||  ||| |||| ||| ||||||||||  | || ||||||||||||||||||| ||||  ||| |||||||||||    |||| |    
T  17914924 cttattttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttataagttt-ttaaggtagtttatgaaaaaatgggttatga 17915022  T
Q  205 atatacaattttcgtt 220  Q
    | ||||||||||||||    
T  17915023 aaatacaattttcgtt 17915038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 29052339 - 29052426
Alignment:
Q  133 tatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgtt 220  Q
    |||||||| ||||||   || ||||||||||||||||||||||||  ||  ||||||||||||| ||||| |  |||||||| |||||    
T  29052339 tatacaaaaaaataaacttttatgtattatttataagtttgttaaggtattttatgaaaaaacagtttatgatgatacaattctcgtt 29052426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 194
Target Start/End: Original strand, 9894743 - 9894833
Alignment:
Q  104 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaa 194  Q
    ||||||||| || ||||| |||| |||| ||  |||||||||||   || ||||||||||||||||||||||||  ||  |||||||||||    
T  9894743 gcttattttcgagcttatacaaaacagcttacgcaaataaataatcttttatgtattatttataagtttgttaaggtattttatgaaaaaa 9894833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 30533957 - 30534046
Alignment:
Q  103 ggcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaa 193  Q
    |||||||||| || ||| |||||| |||| ||| ||||||||||||  || |||||||||| |||||||||| ||  ||| ||||||||||    
T  30533957 ggcttatttt-gagcttgtgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaaa 30534046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 266
Target Start/End: Original strand, 23239253 - 23239386
Alignment:
Q  133 tatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcata 232  Q
    ||||||||||||||||  || || ||||||| ||||| |||||||  | | |||| ||||| ||| |||| |  |||||| |||| || ||  || | ||    
T  23239253 tatacaaataaataagcttttatttattattcataagcttgttaacgtggtttatcaaaaagcaaattatgacgatacaactttccttagtgagaactta 23239352  T
Q  233 tgaattaacataaaggcttaattatttgcataag 266  Q
    |||||||| ||||| ||||| |||||||||||||    
T  23239353 tgaattaatataaaagcttatttatttgcataag 23239386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 32675918 - 32675834
Alignment:
Q  184 ttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagtt 268  Q
    ||||||||||| || |||| || ||||||||||| || ||  || | |||||||||| |||||  |||| |||||||||||||||    
T  32675918 ttatgaaaaaataacttatgaagatacaattttcattagtgagaacttatgaattaatataaaaacttatttatttgcataagtt 32675834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 133 - 267
Target Start/End: Complemental strand, 14826 - 14692
Alignment:
Q  133 tatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcata 232  Q
    ||||||||||||||||  || |||||||||| |||||||| | ||  ||| |||||||||| || ||||||||||||||||||||||| ||  || | ||    
T  14826 tatacaaataaataagcttttatgtattattcataagtttttaaatgtagtttatgaaaaatcagtttataaatatacaattttcgttagtgagaactta 14727  T
Q  233 tgaattaacataaaggcttaattatttgcataagt 267  Q
    | ||||||||| || ||||| ||||||||||||||    
T  14726 taaattaacatgaaagcttatttatttgcataagt 14692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 266
Target Start/End: Original strand, 4076 - 4203
Alignment:
Q  138 aaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaat 237  Q
    |||||||||||  ||||||||||||||||||| |||| || |||| ||||||||||| |  ||||  | |||||||||||||| ||  || | ||| |||    
T  4076 aaataaataagctttaatgtattatttataagcttgtaaagatagtttatgaaaaaatagcttatgta-atacaattttcgttagtgggaacttataaat 4174  T
Q  238 taacataaaggcttaattatttgcataag 266  Q
    ||||||||| ||| | | |||||||||||    
T  4175 taacataaaagctcattgatttgcataag 4203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 106 - 266
Target Start/End: Original strand, 24724 - 24886
Alignment:
Q  106 ttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaa--tagcttatgaaaaaacaatttata 203  Q
    |||||||| | |||| ||||| |||| ||| ||||||||||||  || |||||||||| ||||| |||| ||||  ||| |||||||||||||  | ||     
T  24724 ttattttatagcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatc 24823  T
Q  204 aatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataag 266  Q
    || ||||||| ||| || ||  || | ||| ||||||||||||  |||| |||||||||||||    
T  24824 aagatacaatattcattagtgagaacttataaattaacataaaaacttatttatttgcataag 24886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 178478 - 178594
Alignment:
Q  105 cttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaaaatagcttatg-aaaaaacaatttata 203  Q
    |||||||| |||||||| | || || | ||| ||||||||||||  || ||||||||||||||||||| ||||  ||  ||||| |||||| | |||||     
T  178478 cttatttttgaacttatactaaacaacttatgcaaataaataagcttttatgtattatttataagtttcttaaggtattttatgaaaaaaatagtttatg 178577  T
Q  204 aatatacaattttcgtt 220  Q
    || ||||||||||||||    
T  178578 aagatacaattttcgtt 178594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 279067 - 278993
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaa 212  Q
    |||||| |||| | || ||||||||||||||||||| ||||  ||| |||||||||||| ||||||||| ||||||    
T  279067 caaatacataaatttttatgtattatttataagttt-ttaaggtagtttatgaaaaaaccatttataaagatacaa 278993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 265
Target Start/End: Complemental strand, 109068 - 108944
Alignment:
Q  137 caaataaataagtattaatgtattatttataagtttgttaaaatagcttatgaaaaaacaatttataaatatacaattttcgttcgtacgatcatatgaa 236  Q
    ||||||||||||  || |||||||| | ||||| |||| ||  | | |||||||||||  | |||| || |||||||||||||| ||| ||  |||||||    
T  109068 caaataaataagcctttatgtattactcataagcttgtcaaggtggtttatgaaaaaa--acttatgaagatacaattttcgttagtaaga--atatgaa 108973  T
Q  237 ttaacataaaggcttaattatttgcataa 265  Q
    |||||||| || |||| ||||||||||||    
T  108972 ttaacatacagccttatttatttgcataa 108944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 59249 - 59313
Alignment:
Q  108 attttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagttt 172  Q
    |||||||| |||||  ||| |||| ||| ||||||||||||| || | |||||||||||||||||    
T  59249 attttagagcttatataaaacagcttatgcaaataaataagtttttaagtattatttataagttt 59313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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