View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9359_low_26 (Length: 391)

Name: NF9359_low_26
Description: NF9359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9359_low_26
NF9359_low_26
[»] scaffold0006 (1 HSPs)
scaffold0006 (259-376)||(212410-212529)
[»] chr3 (20 HSPs)
chr3 (259-376)||(33162322-33162437)
chr3 (251-375)||(55092474-55092600)
chr3 (259-376)||(14545833-14545953)
chr3 (259-319)||(32315374-32315434)
chr3 (259-376)||(17109849-17109968)
chr3 (259-376)||(49500109-49500228)
chr3 (259-376)||(50645738-50645857)
chr3 (259-319)||(46962580-46962640)
chr3 (261-376)||(29838294-29838411)
chr3 (259-319)||(27934776-27934836)
chr3 (258-319)||(52835871-52835931)
chr3 (269-376)||(26582621-26582729)
chr3 (259-319)||(33162645-33162705)
chr3 (259-376)||(42093393-42093512)
chr3 (260-319)||(32315700-32315759)
chr3 (260-319)||(38807863-38807922)
chr3 (261-319)||(14546161-14546219)
chr3 (261-319)||(26582937-26582995)
chr3 (261-310)||(17109747-17109796)
chr3 (259-319)||(55092203-55092263)
[»] chr7 (16 HSPs)
chr7 (259-376)||(19157959-19158078)
chr7 (259-376)||(20757358-20757477)
chr7 (251-319)||(40729388-40729456)
chr7 (258-319)||(24353-24414)
chr7 (259-376)||(44483492-44483611)
chr7 (259-317)||(830006-830064)
chr7 (259-317)||(1195186-1195244)
chr7 (261-376)||(34595318-34595436)
chr7 (261-319)||(44219294-44219352)
chr7 (261-319)||(42517192-42517250)
chr7 (260-317)||(22364656-22364713)
chr7 (260-319)||(19476720-19476780)
chr7 (261-319)||(13426325-13426383)
chr7 (257-319)||(13426617-13426679)
chr7 (258-319)||(34595644-34595705)
chr7 (258-319)||(35026442-35026503)
[»] chr1 (16 HSPs)
chr1 (259-376)||(28031913-28032032)
chr1 (259-376)||(50625032-50625149)
chr1 (259-376)||(20061796-20061915)
chr1 (260-376)||(43191655-43191773)
chr1 (259-376)||(39288150-39288271)
chr1 (260-376)||(39027480-39027598)
chr1 (260-376)||(12322358-12322478)
chr1 (259-307)||(14602345-14602393)
chr1 (259-319)||(26244547-26244607)
chr1 (259-319)||(37172246-37172306)
chr1 (254-376)||(42155016-42155139)
chr1 (260-319)||(50096132-50096191)
chr1 (262-309)||(47829295-47829342)
chr1 (258-305)||(50096472-50096519)
chr1 (259-319)||(33882-33942)
chr1 (259-307)||(26244886-26244934)
[»] scaffold0817 (1 HSPs)
scaffold0817 (254-376)||(4248-4372)
[»] chr6 (16 HSPs)
chr6 (259-319)||(9571721-9571781)
chr6 (258-376)||(19661347-19661466)
chr6 (259-376)||(30608864-30608983)
chr6 (259-319)||(5404895-5404955)
chr6 (259-319)||(5409220-5409280)
chr6 (258-375)||(8926456-8926575)
chr6 (258-375)||(8936713-8936832)
chr6 (259-376)||(17238300-17238419)
chr6 (260-376)||(3345019-3345137)
chr6 (259-375)||(26272247-26272365)
chr6 (262-319)||(5924153-5924210)
chr6 (259-376)||(28853751-28853870)
chr6 (257-319)||(16525518-16525580)
chr6 (259-319)||(3485099-3485159)
chr6 (261-310)||(5140690-5140739)
chr6 (259-319)||(19661674-19661734)
[»] scaffold0137 (1 HSPs)
scaffold0137 (259-376)||(36765-36882)
[»] chr4 (24 HSPs)
chr4 (262-319)||(42239398-42239455)
chr4 (259-376)||(17865242-17865361)
chr4 (259-376)||(4712444-4712562)
chr4 (258-319)||(16959760-16959821)
chr4 (257-376)||(13492880-13493001)
chr4 (258-319)||(26314473-26314534)
chr4 (259-319)||(37815667-37815727)
chr4 (259-310)||(17107765-17107816)
chr4 (259-376)||(16491913-16492031)
chr4 (259-317)||(22487545-22487603)
chr4 (262-376)||(32592744-32592860)
chr4 (259-310)||(2184422-2184473)
chr4 (259-310)||(46480944-46480995)
chr4 (259-310)||(46481251-46481302)
chr4 (262-319)||(989078-989135)
chr4 (330-376)||(2184465-2184511)
chr4 (269-319)||(13683322-13683372)
chr4 (259-309)||(16491645-16491695)
chr4 (260-310)||(43750279-43750329)
chr4 (257-319)||(46081422-46081484)
chr4 (259-319)||(989400-989460)
chr4 (259-319)||(12792570-12792630)
chr4 (259-319)||(13683002-13683062)
chr4 (259-319)||(39385180-39385240)
[»] chr8 (13 HSPs)
chr8 (259-319)||(2835418-2835478)
chr8 (259-376)||(26479324-26479442)
chr8 (260-319)||(6892073-6892132)
chr8 (257-318)||(31186670-31186731)
chr8 (259-319)||(6943982-6944042)
chr8 (259-319)||(18764283-18764343)
chr8 (262-317)||(24332585-24332640)
chr8 (257-319)||(3273045-3273107)
chr8 (259-319)||(31402910-31402970)
chr8 (259-310)||(31685976-31686027)
chr8 (260-376)||(13154505-13154623)
chr8 (261-376)||(9180311-9180428)
chr8 (254-319)||(31186367-31186432)
[»] chr2 (27 HSPs)
chr2 (262-376)||(14379114-14379230)
chr2 (259-376)||(18369011-18369130)
chr2 (254-319)||(2395482-2395547)
chr2 (260-376)||(29683440-29683558)
chr2 (261-319)||(42705277-42705335)
chr2 (259-319)||(30432594-30432654)
chr2 (259-376)||(12806815-12806934)
chr2 (259-376)||(28921459-28921578)
chr2 (259-376)||(33940679-33940798)
chr2 (262-374)||(4171793-4171907)
chr2 (261-376)||(3948364-3948481)
chr2 (260-374)||(10748493-10748609)
chr2 (259-319)||(30432920-30432980)
chr2 (260-319)||(41594276-41594335)
chr2 (262-319)||(13572796-13572853)
chr2 (258-310)||(6879999-6880051)
chr2 (251-319)||(17457708-17457776)
chr2 (259-319)||(32521801-32521860)
chr2 (252-310)||(3948699-3948757)
chr2 (259-309)||(13278127-13278177)
chr2 (253-319)||(37608949-37609014)
chr2 (258-319)||(25318619-25318680)
chr2 (262-319)||(41593952-41594009)
chr2 (259-319)||(13572470-13572530)
chr2 (259-319)||(19204918-19204978)
chr2 (259-319)||(29683174-29683234)
chr2 (259-319)||(37609280-37609340)
[»] chr5 (16 HSPs)
chr5 (257-319)||(3598738-3598800)
chr5 (253-319)||(43196893-43196959)
chr5 (251-376)||(10461335-10461462)
chr5 (262-319)||(14868997-14869054)
chr5 (254-319)||(24490837-24490902)
chr5 (259-319)||(6497517-6497577)
chr5 (259-319)||(22394122-22394182)
chr5 (258-376)||(4122576-4122694)
chr5 (261-319)||(3598413-3598471)
chr5 (262-319)||(25329098-25329155)
chr5 (259-319)||(6542257-6542317)
chr5 (259-319)||(7133124-7133183)
chr5 (259-310)||(5933123-5933174)
chr5 (262-317)||(41137467-41137522)
chr5 (257-307)||(7133465-7133515)
chr5 (259-319)||(24491168-24491228)
[»] scaffold0147 (2 HSPs)
scaffold0147 (259-319)||(25461-25521)
scaffold0147 (330-376)||(25377-25424)
[»] scaffold0103 (1 HSPs)
scaffold0103 (259-376)||(43275-43394)
[»] scaffold0170 (1 HSPs)
scaffold0170 (257-376)||(8537-8659)
[»] scaffold0126 (1 HSPs)
scaffold0126 (259-320)||(36317-36378)
[»] scaffold0021 (1 HSPs)
scaffold0021 (258-376)||(118298-118417)


Alignment Details
Target: scaffold0006 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 212410 - 212529
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaattt 356  Q
    |||||||||||||||||||||| |||||||||| |||||||| ||||||||| |||| ||||||        |||| ||| |||||||||||||||||||    
T  212410 ggcttaaatatgaaaatagtccccgcaaatatcagacattttggttttagtccctgtaaaaatatttttttggtttaagtccctgcaaattaaaaaattt 212509  T
Q  357 tggttttggtccttggtatt 376  Q
    ||||||||||||||||||||    
T  212510 tggttttggtccttggtatt 212529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 33162322 - 33162437
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaatannnnnnnngttttagt-cctgcaaattaaaaaatttt 357  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |        |||||||| |||||||||||||||| |||    
T  33162322 ggcttaaatatgaaaatagtccccgcaaatatctgacatttta-ttttagtctctgtaaaaaa--aaattggttttagtccctgcaaattaaaaaaattt 33162418  T
Q  358 ggttttggtccttggtatt 376  Q
    ||||||| |||||||||||    
T  33162419 ggttttgatccttggtatt 33162437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 251 - 375
Target Start/End: Complemental strand, 55092600 - 55092474
Alignment:
Q  251 ttatttatggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagtc-ctgcaaatta 348  Q
    ||||||| ||||||||||||||||||||||   ||||||||||||||||| |||||| ||||||| ||||||        ||||||||| ||||||||      
T  55092600 ttatttaaggcttaaatatgaaaatagtccctccaaatatctgacattttggttttattctctgtaaaaatatttttttggttttagtctctgcaaatat 55092501  T
Q  349 aaaaattttggttttggtccttggtat 375  Q
    ||||| |||| ||||||||||||||||    
T  55092500 aaaaaatttgattttggtccttggtat 55092474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 14545833 - 14545953
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa-tannnnnnnngttttagt-cctgcaaat-taaaaaatt 355  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||||||  ||||||| ||         ||||||| ||||||||| ||||||| |    
T  14545833 ggcttaaatgtgaaaatagtccttgcaaatatctgacattttggttttagtccatgtaaaagtatttttttgattttagtccctgcaaatataaaaaaat 14545932  T
Q  356 ttggttttggtccttggtatt 376  Q
    |||||||||||||||||||||    
T  14545933 ttggttttggtccttggtatt 14545953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 32315374 - 32315434
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||| ||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  32315374 ggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtctctgtaaaa 32315434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 17109849 - 17109968
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaattt 356  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||| ||  ||| ||||||        |||||||| |||||||||  ||||| ||    
T  17109849 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttaatccttgtaaaaatatttttttggttttagtgcctgcaaatataaaaaatt 17109948  T
Q  357 tggttttggtccttggtatt 376  Q
    ||||||||||||||||||||    
T  17109949 tggttttggtccttggtatt 17109968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 259 - 376
Target Start/End: Complemental strand, 49500228 - 49500109
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagtcc-tgcaaattaaaaaattt 356  Q
    ||||||||||||||||||||||  |||||||| ||| ||||| ||||||||| |||| ||||||        |||||||||| |||||||  ||||| ||    
T  49500228 ggcttaaatatgaaaatagtccctgcaaatatttgatattttggttttagtccctgtaaaaatatttttttggttttagtccttgcaaatataaaaaatt 49500129  T
Q  357 tggttttggtccttggtatt 376  Q
    ||||||||||||||||||||    
T  49500128 tggttttggtccttggtatt 49500109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 259 - 376
Target Start/End: Complemental strand, 50645857 - 50645738
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaattt 356  Q
    ||||||||||||||||||||||  | |||||||||||||||||||||||||| || | ||||||        |||||||| |||||||||  ||||| ||    
T  50645857 ggcttaaatatgaaaatagtccctgtaaatatctgacattttagttttagtccctataaaaatatttttttggttttagtccctgcaaatataaaaaatt 50645758  T
Q  357 tggttttggtccttggtatt 376  Q
    |||||||||||||| |||||    
T  50645757 tggttttggtcctttgtatt 50645738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 46962580 - 46962640
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||||||||  |||||||||||| ||||| ||||||||| ||||||||    
T  46962580 ggcttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccctgtaaaa 46962640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 376
Target Start/End: Original strand, 29838294 - 29838411
Alignment:
Q  261 cttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctg-taaaatannnnnnnngttttagtc-ctgcaaattaaaaaattttg 358  Q
    ||||||||||||||||||||  |||||||||||| ||||| ||||||||| |||  ||||||        ||||||||| ||||||||  ||||| ||||    
T  29838294 cttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccctgcaaaaatatttttttcgttttagtctctgcaaatataaaaaatttg 29838393  T
Q  359 gttttggtccttggtatt 376  Q
    |||||||||||| |||||    
T  29838394 gttttggtcctttgtatt 29838411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 27934836 - 27934776
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||||||||  |||||||||||||||| | ||||||||| | ||||||    
T  27934836 ggcttaaatatgaaaatagtccctgcaaatatctgacattctggttttagtcccagtaaaa 27934776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 52835931 - 52835871
Alignment:
Q  258 tggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||||||||||||||  ||||||||| | |||||| ||||||||| ||||||||    
T  52835931 tggcttaaatatgaaaatagtccctgcaaatatccgtcattttggttttagtc-ctgtaaaa 52835871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 376
Target Start/End: Original strand, 26582621 - 26582729
Alignment:
Q  269 tgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagtcctgcaaattaaaaaattttggttttggtc 367  Q
    |||||||||||  ||||||||||||| ||||| ||||||||| |||| ||||||        || ||||||||||||||  | ||| |||||||||||||    
T  26582621 tgaaaatagtctccgcaaatatctgatattttggttttagtccctgtaaaaatattttgttggtgttagtcctgcaaatatagaaaatttggttttggtc 26582720  T
Q  368 cttggtatt 376  Q
    |||| ||||    
T  26582721 cttgatatt 26582729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 33162705 - 33162645
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||| |||| |||| || ||||||||||| |||||||||||||| || |||||    
T  33162705 ggcttaaatatggaaatggtccccgtaaatatctgacgttttagttttagtccctataaaa 33162645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 42093393 - 42093512
Alignment:
Q  259 ggcttaaatatgaaaatagtc-ctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagtc-ctgcaaattaaaaaatt 355  Q
    ||||||||||||||||||||| ||| | ||||||||||||||| | ||||||| |||| ||||||        ||||||||| ||||||||  ||||| |    
T  42093393 ggcttaaatatgaaaatagtctctc-ctaatatctgacattttggatttagtccctgtaaaaatatttttttggttttagtctctgcaaatataaaaaat 42093491  T
Q  356 ttggttttggtccttggtatt 376  Q
    ||||||||| |||||||||||    
T  42093492 ttggttttgatccttggtatt 42093512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 32315759 - 32315700
Alignment:
Q  260 gcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||| |||| ||||  |||||||||||| ||||| ||||||||| ||||||||    
T  32315759 gcttaaatatggaaatggtccctgcaaatatctgatattttggttttagtccctgtaaaa 32315700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 38807922 - 38807863
Alignment:
Q  260 gcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||| |||||||||  | ||||||||||||||||  |||||||| ||||||||    
T  38807922 gcttaaatatggaaatagtccctgtaaatatctgacattttgattttagtccctgtaaaa 38807863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 14546219 - 14546161
Alignment:
Q  261 cttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||| |||| ||||  |||||||||||||||||| |||| |||| ||||||||    
T  14546219 cttaaatatggaaatggtccctgcaaatatctgacattttggtttcagtcactgtaaaa 14546161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 26582995 - 26582937
Alignment:
Q  261 cttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||| |||| ||||  ||||||||||||||||||  |||||||| ||||||||    
T  26582995 cttaaatatggaaatggtccctgcaaatatctgacattttgattttagtccctgtaaaa 26582937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 17109747 - 17109796
Alignment:
Q  261 cttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtc 310  Q
    ||||||||||||||||||||  ||||||||||  |||||| |||||||||    
T  17109747 cttaaatatgaaaatagtccctgcaaatatctagcattttggttttagtc 17109796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 55092203 - 55092263
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||||||||  |||  | ||||||||||| |||| |||||||||||| |||||    
T  55092203 ggcttaaatatgaaaatgatccctgtaaatatctgacgttttggttttagtctctataaaa 55092263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 376
Target Start/End: Complemental strand, 19158078 - 19157959
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaattt 356  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||| ||||||        |||||||| |||||||||  ||||||||    
T  19158078 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttagttttagtccctgcaaatataaaaattt 19157979  T
Q  357 tggttttggtccttggtatt 376  Q
    ||||||||||||||||||||    
T  19157978 tggttttggtccttggtatt 19157959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 376
Target Start/End: Complemental strand, 20757477 - 20757358
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaattt 356  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||| ||||||        |||||||| |||||||||  ||||||||    
T  20757477 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttagttttagtccctgcaaatataaaaattt 20757378  T
Q  357 tggttttggtccttggtatt 376  Q
    ||||||||||||||||||||    
T  20757377 tggttttggtccttggtatt 20757358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 251 - 319
Target Start/End: Complemental strand, 40729456 - 40729388
Alignment:
Q  251 ttatttatggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||||||    
T  40729456 ttatttaaggcttaaatatgaaaatagtctttgcaaatatctgacattttggttttagtccctgtaaaa 40729388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 24353 - 24414
Alignment:
Q  258 tggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||||| ||||||||    
T  24353 tggcttaaatatgaaaatagtcccggcaaatatctgacattttggttttagtccctgtaaaa 24414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 259 - 376
Target Start/End: Complemental strand, 44483611 - 44483492
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaattt 356  Q
    ||||||||| |||||||||||| ||||||||| | ||||||| ||||||||| |||| ||||||        |||||||| |||||||||  ||||||||    
T  44483611 ggcttaaatgtgaaaatagtccccgcaaatatttaacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaattt 44483512  T
Q  357 tggttttggtccttggtatt 376  Q
    ||||||||||| ||||||||    
T  44483511 tggttttggtcattggtatt 44483492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 830064 - 830006
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaa 317  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||| || ||||||    
T  830064 ggcttaaatgtgaaaatagtccttgcaaatatctgacattttagttttaatccctgtaa 830006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 1195244 - 1195186
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaa 317  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||| || ||||||    
T  1195244 ggcttaaatgtgaaaatagtccttgcaaatatctgacattttagttttaatccctgtaa 1195186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 376
Target Start/End: Original strand, 34595318 - 34595436
Alignment:
Q  261 cttaaatatgaaaatagtcctcgcaaatatctgaca-ttttagttttagtctctgtaaaa-tannnnnnnngttttagtcc-tgcaaattaaaaaatttt 357  Q
    |||||||||||||||||||| || |||||||||||| |||| |||||| || |||||||| ||         ||||||||| |||||||||||||| |||    
T  34595318 cttaaatatgaaaatagtccccgtaaatatctgacaattttggttttaatccctgtaaaaatatttttttgattttagtccctgcaaattaaaaaaattt 34595417  T
Q  358 ggttttggtccttggtatt 376  Q
    |||||||||||||||||||    
T  34595418 ggttttggtccttggtatt 34595436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 44219294 - 44219352
Alignment:
Q  261 cttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||||||| ||||||||    
T  44219294 cttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtcactgtaaaa 44219352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 42517250 - 42517192
Alignment:
Q  261 cttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||| |||||||| ||| ||||||||||||||||||| ||||||||| ||||||||    
T  42517250 cttaaatgtgaaaataatccccgcaaatatctgacattttggttttagtccctgtaaaa 42517192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 317
Target Start/End: Original strand, 22364656 - 22364713
Alignment:
Q  260 gcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaa 317  Q
    |||||||| ||||||||||||  |||||||||||||||||| ||||||||| ||||||    
T  22364656 gcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaa 22364713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 19476780 - 19476720
Alignment:
Q  260 gcttaaatatgaaaatagtcctcgcaaatatctgaca-ttttagttttagtctctgtaaaa 319  Q
    |||||||||||||||||||||| |||||||||||| | |||||||||||||  ||||||||    
T  19476780 gcttaaatatgaaaatagtccttgcaaatatctgatatttttagttttagttcctgtaaaa 19476720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 13426325 - 13426383
Alignment:
Q  261 cttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||| ||||||||||  |||||||||||||||||| ||||||||  ||||||||    
T  13426325 cttaaatatcaaaatagtccctgcaaatatctgacattttggttttagttcctgtaaaa 13426383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 13426679 - 13426617
Alignment:
Q  257 atggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||  ||| ||||  ||||||||||||| |||||||||||||| || |||||    
T  13426679 atggcttaaatatgggaatggtccctgcaaatatctgacgttttagttttagtccctctaaaa 13426617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 34595705 - 34595644
Alignment:
Q  258 tggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||||||||| ||||  | ||||||||||| |||| ||||||||| || |||||    
T  34595705 tggcttaaatatgaaaatggtccctgtaaatatctgacgttttggttttagtccctataaaa 34595644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 35026442 - 35026503
Alignment:
Q  258 tggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||| |||| ||||  ||||| ||||||| |||| ||||||||| ||||||||    
T  35026442 tggcttaaatatggaaatggtccctgcaaacatctgacgttttggttttagtccctgtaaaa 35026503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 4e-23; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 376
Target Start/End: Complemental strand, 28032032 - 28031913
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaattt 356  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||| ||||||        |||||||| |||||||||  ||||||||    
T  28032032 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttagttttagtccctgcaaatataaaaattt 28031933  T
Q  357 tggttttggtccttggtatt 376  Q
    ||||||||||||||||||||    
T  28031932 tggttttggtccttggtatt 28031913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 376
Target Start/End: Complemental strand, 50625149 - 50625032
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaatannnnnnnngttttagt-cctgcaaattaaaaaatttt 357  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||||||| |        |||||||| |||||||||  ||||| |||    
T  50625149 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaa-aaaaatttggttttagtccctgcaaatataaaaaattt 50625051  T
Q  358 ggttttggtccttggtatt 376  Q
    |||||||||||||||||||    
T  50625050 ggttttggtccttggtatt 50625032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 20061796 - 20061915
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaattt 356  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||| ||||||        |||||||| |||||||||  ||||| ||    
T  20061796 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatt 20061895  T
Q  357 tggttttggtccttggtatt 376  Q
    || |||||||||||||||||    
T  20061896 tgattttggtccttggtatt 20061915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 376
Target Start/End: Original strand, 43191655 - 43191773
Alignment:
Q  260 gcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaatttt 357  Q
    |||||||||||||||| ||||  |||||||||||| ||||||||||||||| |||| ||||||        |||||||| |||||||||  |||||  ||    
T  43191655 gcttaaatatgaaaattgtccctgcaaatatctgatattttagttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaaatt 43191754  T
Q  358 ggttttggtccttggtatt 376  Q
    |||||||||||||||||||    
T  43191755 ggttttggtccttggtatt 43191773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 39288150 - 39288271
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnng-ttttagtc-ctgcaaat-taaaaaat 354  Q
    ||||||||||||||||||||||   ||||||| |||||||||  ||||||||||||| ||||||        | |||||||| |||||||| ||||||||    
T  39288150 ggcttaaatatgaaaatagtccctccaaatatatgacattttgattttagtctctgtaaaaatattttttttgattttagtcactgcaaatataaaaaat 39288249  T
Q  355 tttggttttggtccttggtatt 376  Q
    ||||||||||||||||||||||    
T  39288250 tttggttttggtccttggtatt 39288271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 376
Target Start/End: Original strand, 39027480 - 39027598
Alignment:
Q  260 gcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaatttt 357  Q
    |||||||| |||||||||||| || ||||||||||||||||  |||||||| |||| ||||||        |||||||| |||||||||  ||||| |||    
T  39027480 gcttaaatgtgaaaatagtccccggaaatatctgacattttgcttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaattt 39027579  T
Q  358 ggttttggtccttggtatt 376  Q
    ||||||| |||||||||||    
T  39027580 ggttttgatccttggtatt 39027598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 376
Target Start/End: Complemental strand, 12322478 - 12322358
Alignment:
Q  260 gcttaaatatgaaaatagtcctcgcaaatatctgac-attttagttttagtctctgt-aaaatannnnnnnng-ttttagt-cctgcaaattaaaaaatt 355  Q
    ||||||||||||||||||||| || ||||||||||| ||||| |||||| || |||| ||||||        | ||||||| |||||||||||||||| |    
T  12322478 gcttaaatatgaaaatagtccccgtaaatatctgacaattttggttttaatccctgtaaaaatattttttttgattttagtccctgcaaattaaaaaaat 12322379  T
Q  356 ttggttttggtccttggtatt 376  Q
    |||||||||||||||| ||||    
T  12322378 ttggttttggtccttgatatt 12322358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 14602393 - 14602345
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagtttta 307  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  14602393 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggtttta 14602345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 26244547 - 26244607
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||| |||| ||||  |||||||||||||||||| ||||||||| ||||||||    
T  26244547 ggcttaaatatggaaatggtccctgcaaatatctgacattttggttttagtccctgtaaaa 26244607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 37172246 - 37172306
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||||||||||||   ||||||||||| |||||| ||||||||| ||||||||    
T  37172246 ggcttaaatatgaaaatagtctctgcaaatatctgtcattttggttttagtccctgtaaaa 37172306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 376
Target Start/End: Complemental strand, 42155139 - 42155016
Alignment:
Q  254 tttatggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaatannnnnnnngttttagt-cctgcaaattaaaaa 352  Q
    |||| ||||||||||||||||||||||  | |||||||||||||||| |||||||   ||||||||          |||||||| |||||||||  ||||    
T  42155139 tttaaggcttaaatatgaaaatagtccctgtaaatatctgacattttggttttagatcctgtaaaaatattttttggttttagtccctgcaaatataaaa 42155040  T
Q  353 attttggttttggtccttggtatt 376  Q
    | ||||||||||||||||| ||||    
T  42155039 aatttggttttggtccttgatatt 42155016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 50096132 - 50096191
Alignment:
Q  260 gcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||| |||| ||||  |||||||||||||||||| ||||||||| ||||||||    
T  50096132 gcttaaatatggaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaa 50096191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 309
Target Start/End: Complemental strand, 47829342 - 47829295
Alignment:
Q  262 ttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagt 309  Q
    |||||||||||||| ||||  |||||||||||||||||| ||||||||    
T  47829342 ttaaatatgaaaattgtccctgcaaatatctgacattttggttttagt 47829295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 50096519 - 50096472
Alignment:
Q  258 tggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttt 305  Q
    |||||||||| ||||||||||||  |||||||||||||||||| ||||    
T  50096519 tggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttt 50096472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 33942 - 33882
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||| ||||||| ||    ||||||||||||||||| ||||||||| ||||||||    
T  33942 ggcttaaataagaaaataatctctacaaatatctgacattttggttttagtccctgtaaaa 33882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 26244934 - 26244886
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagtttta 307  Q
    ||||||||| |||||||||| |  |||||||||||||||||| ||||||    
T  26244934 ggcttaaatgtgaaaatagttcctgcaaatatctgacattttggtttta 26244886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0817
Description:

Target: scaffold0817; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 376
Target Start/End: Complemental strand, 4372 - 4248
Alignment:
Q  254 tttatggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaa 351  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||| ||||||        |||||||| |||||||||  |||    
T  4372 tttaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaa 4273  T
Q  352 aattttggttttggtccttggtatt 376  Q
    || ||||||||||||||||||||||    
T  4272 aaatttggttttggtccttggtatt 4248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 9571781 - 9571721
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  9571781 ggcttaaatatgaaaatagtccttgcaaatatctgacattttagttttagtccctgtaaaa 9571721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 19661347 - 19661466
Alignment:
Q  258 tggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaatannnnnnnngttttagt-cctgcaaattaaaaaattt 356  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||||| |||||||||          |||||||| |||||||||  ||||| ||    
T  19661347 tggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtttctgtaaaaatattttttggttttagtccctgcaaatataaaaaatt 19661446  T
Q  357 tggttttggtccttggtatt 376  Q
    || |||||||||||||||||    
T  19661447 tgattttggtccttggtatt 19661466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 30608864 - 30608983
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaattt 356  Q
    ||||||||||||||||||||||  |||||||| ||| ||||||||||||||| |||| ||||||        |||||||| |||||||||  ||||| ||    
T  30608864 ggcttaaatatgaaaatagtccctgcaaatatttgatattttagttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatt 30608963  T
Q  357 tggttttggtccttggtatt 376  Q
    ||||||||||||||||||||    
T  30608964 tggttttggtccttggtatt 30608983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 5404955 - 5404895
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||    
T  5404955 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtctctataaaa 5404895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 5409280 - 5409220
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||    
T  5409280 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtctctataaaa 5409220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 375
Target Start/End: Complemental strand, 8926575 - 8926456
Alignment:
Q  258 tggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaatt 355  Q
    |||||||||||||||||||||||  | |||||||||||||||| ||||||||| |||| ||||||        |||||||| |||||||||  ||||| |    
T  8926575 tggcttaaatatgaaaatagtcccggtaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaat 8926476  T
Q  356 ttggttttggtccttggtat 375  Q
    ||||||||||||||| ||||    
T  8926475 ttggttttggtcctttgtat 8926456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 375
Target Start/End: Complemental strand, 8936832 - 8936713
Alignment:
Q  258 tggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaatt 355  Q
    |||||||||||||||||||||||  | |||||||||||||||| ||||||||| |||| ||||||        |||||||| |||||||||  ||||| |    
T  8936832 tggcttaaatatgaaaatagtcccggtaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaat 8936733  T
Q  356 ttggttttggtccttggtat 375  Q
    ||||||||||||||| ||||    
T  8936732 ttggttttggtcctttgtat 8936713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 259 - 376
Target Start/End: Complemental strand, 17238419 - 17238300
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaattt 356  Q
    ||||||||| ||||||||||||  |||||||||||||||||| ||||||||| |||| ||||||        |||||||| |||||||||  | ||| ||    
T  17238419 ggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaataattttttggttttagtccctgcaaatatagaaaatt 17238320  T
Q  357 tggttttggtccttggtatt 376  Q
    ||||||||||||||||||||    
T  17238319 tggttttggtccttggtatt 17238300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 376
Target Start/End: Original strand, 3345019 - 3345137
Alignment:
Q  260 gcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaatttt 357  Q
    |||||||||||||||||||||  ||| |||||||| ||||| |||||||||  ||| ||||||        |||||||| |||||||||  ||||| |||    
T  3345019 gcttaaatatgaaaatagtccctgcagatatctgatattttggttttagtccttgtaaaaatatttttttcgttttagtccctgcaaatataaaaaattt 3345118  T
Q  358 ggttttggtccttggtatt 376  Q
    |||||||||||||||||||    
T  3345119 ggttttggtccttggtatt 3345137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 26272365 - 26272247
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttag-tcctgcaaattaaaaaattt 356  Q
    ||||||||||||||||||||||  | |||||||||||||||| ||||||||| || | ||||||        ||||||| ||||||||||  ||||| ||    
T  26272365 ggcttaaatatgaaaatagtccctgtaaatatctgacattttggttttagtccctataaaaatatatttttggttttagttcctgcaaatataaaaaatt 26272266  T
Q  357 tggttttggtccttggtat 375  Q
    || ||||||||||||||||    
T  26272265 tgattttggtccttggtat 26272247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 5924210 - 5924153
Alignment:
Q  262 ttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||  ||||||||    
T  5924210 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagttcctgtaaaa 5924153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 376
Target Start/End: Complemental strand, 28853870 - 28853751
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttag-tcctgcaaattaaaaaattt 356  Q
    |||||||| |||||||||||||   ||||||||||||||||| ||||||||| || | ||||||        ||||||| ||||||||||  ||||| ||    
T  28853870 ggcttaaacatgaaaatagtccctacaaatatctgacattttggttttagtccctataaaaatatttttttggttttagttcctgcaaatataaaaaatt 28853771  T
Q  357 tggttttggtccttggtatt 376  Q
    ||||||||||||||| ||||    
T  28853770 tggttttggtccttgatatt 28853751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 16525580 - 16525518
Alignment:
Q  257 atggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||||| |||  ||||||||||||||||||| | |||||||  |||||||    
T  16525580 atggcttaaatatgaaaatcgtctccgcaaatatctgacattttggatttagtccttgtaaaa 16525518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 3485159 - 3485099
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||| ||||||||||||  |||||||| ||||||||| ||||||||| ||| ||||    
T  3485159 ggcttaaatgtgaaaatagtccctgcaaatatgtgacattttggttttagtccctgcaaaa 3485099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 5140690 - 5140739
Alignment:
Q  261 cttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtc 310  Q
    |||||||||| |||| ||||  |||||||||||||||||| |||||||||    
T  5140690 cttaaatatggaaatggtccctgcaaatatctgacattttggttttagtc 5140739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 19661734 - 19661674
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||| |||| ||||| ||||||||||| | |||| ||||||||| || |||||    
T  19661734 ggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctataaaa 19661674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 36765 - 36882
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaatannnnnnnngttttagt-cctgcaaattaaaaaatttt 357  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||| ||| ||||||        |||||||| |||||||||  ||||| |||    
T  36765 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctg-aaaatatttttttggttttagtccctgcaaatataaaaaattt 36863  T
Q  358 ggttttggtccttggtatt 376  Q
    |||||||||||||||||||    
T  36864 ggttttggtccttggtatt 36882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 42239455 - 42239398
Alignment:
Q  262 ttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  42239455 ttaaatatgaaaatagtccctgcaaatatctgacattttagttttagtctctgtaaaa 42239398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 376
Target Start/End: Complemental strand, 17865361 - 17865242
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaattt 356  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||| ||||||        |||||||| |||||||||  ||||| ||    
T  17865361 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatt 17865262  T
Q  357 tggttttggtccttggtatt 376  Q
    ||||||||||| ||||||||    
T  17865261 tggttttggtctttggtatt 17865242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 376
Target Start/End: Complemental strand, 4712562 - 4712444
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaatannnnnnnngttttagt-cctgcaaattaaaaaatttt 357  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||| || |||||          |||||||| |||||||||  ||||| |||    
T  4712562 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctataaaaatattttttggttttagtccctgcaaatataaaaaattt 4712463  T
Q  358 ggttttggtccttggtatt 376  Q
    |||||||||||||||||||    
T  4712462 ggttttggtccttggtatt 4712444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 16959760 - 16959821
Alignment:
Q  258 tggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||| || |||||    
T  16959760 tggcttaaatatgaaaatagtccctgcaaatatctgacattttagttttagtccctataaaa 16959821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 257 - 376
Target Start/End: Original strand, 13492880 - 13493001
Alignment:
Q  257 atggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaat 354  Q
    ||||||||||||||||||||||||  ||||||||||||| |||| ||||||||| || | ||||||        |||||||| ||||||||| ||||||     
T  13492880 atggcttaaatatgaaaatagtccctgcaaatatctgactttttggttttagtccctctaaaaatatttttttggttttagtccctgcaaataaaaaaaa 13492979  T
Q  355 tttggttttggtccttggtatt 376  Q
     |||||||||||| ||||||||    
T  13492980 attggttttggtctttggtatt 13493001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 26314473 - 26314534
Alignment:
Q  258 tggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||| ||||||||||||  |||||||||||||||||| ||||||||| ||||||||    
T  26314473 tggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaa 26314534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 37815727 - 37815667
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||| ||||  |||||||||||||||||| ||||||||| ||||||||    
T  37815727 ggcttaaatatgaaaattgtcccagcaaatatctgacattttggttttagtccctgtaaaa 37815667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 310
Target Start/End: Complemental strand, 17107816 - 17107765
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtc 310  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  17107816 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtc 17107765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 376
Target Start/End: Complemental strand, 16492031 - 16491913
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagtcctgcaaattaaaaaatttt 357  Q
    |||||||||||||||||||||   |||||||||||||||||| |||||| || |||| ||||||        ||||||| | |||||||  |||||  ||    
T  16492031 ggcttaaatatgaaaatagtcactgcaaatatctgacattttggttttaatccctgtaaaaatatttttttagttttagccttgcaaatataaaaaaatt 16491932  T
Q  358 ggttttggtccttggtatt 376  Q
    |||||||||||||||||||    
T  16491931 ggttttggtccttggtatt 16491913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 22487603 - 22487545
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaa 317  Q
    ||||||||||||||||||||||  |||||||| ||||||||| ||||||||| ||||||    
T  22487603 ggcttaaatatgaaaatagtccctgcaaatatttgacattttggttttagtccctgtaa 22487545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 376
Target Start/End: Original strand, 32592744 - 32592860
Alignment:
Q  262 ttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaattttgg 359  Q
    |||||| ||||||||||||  |||||||| ||||||||| |||||||||  ||| ||||||        |||||||| |||||||||  |||||||||||    
T  32592744 ttaaatgtgaaaatagtccctgcaaatatttgacattttggttttagtccttgtaaaaatatttttttggttttagtccctgcaaatataaaaattttgg 32592843  T
Q  360 ttttggtccttggtatt 376  Q
    |||||||||||| ||||    
T  32592844 ttttggtccttgatatt 32592860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 2184422 - 2184473
Alignment:
Q  259 ggcttaaatatgaaaatagtcctc-gcaaatatctgacattttagttttagtc 310  Q
    ||||||||||||||||||| |||| |||||||||||||||||| |||||||||    
T  2184422 ggcttaaatatgaaaatag-cctctgcaaatatctgacattttggttttagtc 2184473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 46480944 - 46480995
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtc 310  Q
    ||||||||||||||||| ||||| ||||||||||| | |||| |||||||||    
T  46480944 ggcttaaatatgaaaatggtccttgcaaatatctggcgttttggttttagtc 46480995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 310
Target Start/End: Complemental strand, 46481302 - 46481251
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtc 310  Q
    ||||||||||||||||||||||  |||||||||| ||||||| | |||||||    
T  46481302 ggcttaaatatgaaaatagtccctgcaaatatctaacattttggatttagtc 46481251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 989078 - 989135
Alignment:
Q  262 ttaaatatgaaaatagtcctcgc-aaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||||||||||  || |||||||||||||||| ||||||||| ||||||||    
T  989078 ttaaatatgaaaatagtccctgccaaatatctgacattttggttttagtc-ctgtaaaa 989135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 330 - 376
Target Start/End: Original strand, 2184465 - 2184511
Alignment:
Q  330 gttttagtcctgcaaattaaaaaattttggttttggtccttggtatt 376  Q
    |||||||||||||||||   |||| ||||||||||||||||||||||    
T  2184465 gttttagtcctgcaaatattaaaaatttggttttggtccttggtatt 2184511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 319
Target Start/End: Complemental strand, 13683372 - 13683322
Alignment:
Q  269 tgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||  ||||||||||||||||||  |||||||| ||||||||    
T  13683372 tgaaaatagtccctgcaaatatctgacattttgattttagtccctgtaaaa 13683322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 16491645 - 16491695
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagt 309  Q
    ||||||||||||||||| ||||| | ||||||||| ||||||| |||||||    
T  16491645 ggcttaaatatgaaaatggtccttgtaaatatctggcattttaattttagt 16491695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 43750329 - 43750279
Alignment:
Q  260 gcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtc 310  Q
    |||||||||||||||||||||  ||||||||| | |||||| |||||||||    
T  43750329 gcttaaatatgaaaatagtccctgcaaatatccgtcattttggttttagtc 43750279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 319
Target Start/End: Original strand, 46081422 - 46081484
Alignment:
Q  257 atggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||  |||||||||||   ||||||||||||||||| ||||||||| || |||||    
T  46081422 atggcttaaatcagaaaatagtccctccaaatatctgacatttttgttttagtccctataaaa 46081484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 989460 - 989400
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||| |||| ||||  ||||||||||||| |||| ||||||||| || |||||    
T  989460 ggcttaaatatggaaatggtccctgcaaatatctgacgttttggttttagtccctataaaa 989400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 12792570 - 12792630
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||| ||||||||  |  |||||||||| |||||| ||||||||| ||||||||    
T  12792570 ggcttaaatataaaaatagttatttcaaatatctgtcattttggttttagtccctgtaaaa 12792630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 13683002 - 13683062
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||| ||||  |||  |||||||||||||||||| ||||||||| || |||||    
T  13683002 ggcttaaatatggaaatgatccctgcaaatatctgacattttggttttagtccctataaaa 13683062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 39385180 - 39385240
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||| ||||   ||||||| ||||||||| | |||| |||||||||||    
T  39385180 ggcttaaatatgaaaatcgtccctccaaatatatgacattttggatttaatctctgtaaaa 39385240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 6e-19; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 2835478 - 2835418
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  2835478 ggcttaaatatgaaaatagtccccgcaaatatctgacattttggttttagtcgctgtaaaa 2835418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 26479324 - 26479442
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaatannnnnnnngttttagtc-ctgcaaattaaaaaatttt 357  Q
    ||||||||| ||||||||||||  |||||||| ||||||||| ||||||||| |||||||| |        ||||||||| ||||||||  |||||||||    
T  26479324 ggcttaaatgtgaaaatagtccctgcaaatatttgacattttggttttagtccctgtaaaaaaaaaaattggttttagtcactgcaaatataaaaatttt 26479423  T
Q  358 ggttttggtccttggtatt 376  Q
    |||||||||| ||||||||    
T  26479424 ggttttggtcattggtatt 26479442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 6892132 - 6892073
Alignment:
Q  260 gcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||| |||| | |||||||||||||||||||||||||| ||||||||    
T  6892132 gcttaaatatgaaaataatccttgtaaatatctgacattttagttttagtccctgtaaaa 6892073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 257 - 318
Target Start/End: Complemental strand, 31186731 - 31186670
Alignment:
Q  257 atggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaa 318  Q
    |||| |||||||||||||||||||  |||||||||||||||||| ||||||||| |||||||    
T  31186731 atggattaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaa 31186670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 6944042 - 6943982
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||  ||||||||    
T  6944042 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagttcctgtaaaa 6943982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 18764283 - 18764343
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||||  |||||||    
T  18764283 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccttgtaaaa 18764343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 24332640 - 24332585
Alignment:
Q  262 ttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaa 317  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||||| ||||||    
T  24332640 ttaaatatgaaaattgtccctgcaaatatctgacattttagttttagtccctgtaa 24332585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 3273107 - 3273045
Alignment:
Q  257 atggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||| ||||||||||||  |||||||||||||||||| ||||||||| || |||||    
T  3273107 atggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctataaaa 3273045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 31402910 - 31402970
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||||||||  |||||||||||| ||||| |||||||||  |||||||    
T  31402910 ggcttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccttgtaaaa 31402970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 310
Target Start/End: Complemental strand, 31686027 - 31685976
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtc 310  Q
    |||||||||||||| ||||||||  ||||||||||||||||| |||||||||    
T  31686027 ggcttaaatatgaatatagtccttacaaatatctgacattttggttttagtc 31685976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 376
Target Start/End: Complemental strand, 13154623 - 13154505
Alignment:
Q  260 gcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaatttt 357  Q
    |||||||||||||||||||||   |||||||||||||||||  ||||| || |||| ||||||        |||||||| |||||||||  |||||  ||    
T  13154623 gcttaaatatgaaaatagtccctacaaatatctgacattttgattttaatccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaaatt 13154524  T
Q  358 ggttttggtccttggtatt 376  Q
    |||||||||||||||||||    
T  13154523 ggttttggtccttggtatt 13154505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 376
Target Start/End: Complemental strand, 9180428 - 9180311
Alignment:
Q  261 cttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagtcc-tgcaaattaaaaaattttg 358  Q
    |||||||||||| ||| |||  |||||||||||||||||| |||||| || |||| ||||||        |||||||||| |||||||  ||||| ||||    
T  9180428 cttaaatatgaatataatccctgcaaatatctgacattttggttttaatccctgtaaaaatattgttttggttttagtccttgcaaatataaaaaatttg 9180329  T
Q  359 gttttggtccttggtatt 376  Q
    ||||||||||||| ||||    
T  9180328 gttttggtccttgatatt 9180311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 319
Target Start/End: Original strand, 31186367 - 31186432
Alignment:
Q  254 tttatggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||| |||| ||||  ||||||||||| | |||| ||||||||| || |||||    
T  31186367 tttatggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaa 31186432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 376
Target Start/End: Original strand, 14379114 - 14379230
Alignment:
Q  262 ttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaattttgg 359  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||| |||| ||||||        |||||||| |||||||||  ||||| |||||    
T  14379114 ttaaatatgaaaatagtccttgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatgtaaaaaatttgg 14379213  T
Q  360 ttttggtccttggtatt 376  Q
    ||||||||||| |||||    
T  14379214 ttttggtcctttgtatt 14379230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 18369011 - 18369130
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaattt 356  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||| ||||||        |||||||| |||||||||  ||||| ||    
T  18369011 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatattttttgggttttagtccctgcaaatataaaaaatt 18369110  T
Q  357 tggttttggtccttggtatt 376  Q
    ||||||||||| ||||||||    
T  18369111 tggttttggtctttggtatt 18369130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 319
Target Start/End: Complemental strand, 2395547 - 2395482
Alignment:
Q  254 tttatggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||| ||||||||| ||||||||    
T  2395547 tttaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaa 2395482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 376
Target Start/End: Complemental strand, 29683558 - 29683440
Alignment:
Q  260 gcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaatttt 357  Q
    ||||||||||| |||||||||  ||||||||||||||||||  |||||||| |||| ||||||        |||||||| |||||||||  ||||| |||    
T  29683558 gcttaaatatggaaatagtccctgcaaatatctgacattttgattttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaattt 29683459  T
Q  358 ggttttggtccttggtatt 376  Q
    |||||||||||||||||||    
T  29683458 ggttttggtccttggtatt 29683440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 42705335 - 42705277
Alignment:
Q  261 cttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||||||  |||||||||||||||||| | ||||||||||||||||    
T  42705335 cttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtctctgtaaaa 42705277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 30432594 - 30432654
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||| ||||||||||||  |||||||||||||||||| ||||||||| ||||||||    
T  30432594 ggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaa 30432654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 376
Target Start/End: Complemental strand, 12806934 - 12806815
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagtc-ctgcaaattaaaaaattt 356  Q
    ||||||||||||||||| ||||  |||||||||| ||||||| ||||||||| | || ||||||        ||||||||| ||||||||  ||||| ||    
T  12806934 ggcttaaatatgaaaattgtccctgcaaatatctaacattttggttttagtccccgtaaaaatatttttttggttttagtcactgcaaatataaaaaatt 12806835  T
Q  357 tggttttggtccttggtatt 376  Q
    ||||||||||||||||||||    
T  12806834 tggttttggtccttggtatt 12806815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 376
Target Start/End: Complemental strand, 28921578 - 28921459
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaattt 356  Q
    ||||||||||||||||||||||  |||||||| ||||||||| |||||| || |||| ||||||        |||||||| |||||||||  ||||| ||    
T  28921578 ggcttaaatatgaaaatagtccctgcaaatatatgacattttggttttaatccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatt 28921479  T
Q  357 tggttttggtccttggtatt 376  Q
    ||||||||||||||| ||||    
T  28921478 tggttttggtccttgatatt 28921459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 33940679 - 33940798
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttag-tcctgcaaattaaaaaattt 356  Q
    ||||||||||||||||||||||  |||||||||| |||||||  |||||||| |||| ||||||        ||||||| ||||||||||  ||||| ||    
T  33940679 ggcttaaatatgaaaatagtccctgcaaatatcttacattttgattttagtccctgtaaaaatatttttttagttttagttcctgcaaatataaaaaatt 33940778  T
Q  357 tggttttggtccttggtatt 376  Q
    ||||||||||||||| ||||    
T  33940779 tggttttggtccttgatatt 33940798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 262 - 374
Target Start/End: Complemental strand, 4171907 - 4171793
Alignment:
Q  262 ttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaattttgg 359  Q
    |||||| ||||||||||||  |||||||||||||||||| ||||||||||| || ||||||        |||||||| || ||||||  ||||| |||||    
T  4171907 ttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtctcggtaaaaatatttttttggttttagtcccagcaaatataaaaaatttgg 4171808  T
Q  360 ttttggtccttggta 374  Q
    |||||||||||||||    
T  4171807 ttttggtccttggta 4171793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 376
Target Start/End: Original strand, 3948364 - 3948481
Alignment:
Q  261 cttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaattttg 358  Q
    ||||||||||||||||||||  ||||||| ||||||||||| |||||||| || | ||||||        |||||||| |||||||||  ||||| ||||    
T  3948364 cttaaatatgaaaatagtccatgcaaatacctgacattttaattttagtccctataaaaatatttttttggttttagtccctgcaaatataaaaaatttg 3948463  T
Q  359 gttttggtccttggtatt 376  Q
    |||| |||||||||||||    
T  3948464 gtttcggtccttggtatt 3948481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 374
Target Start/End: Original strand, 10748493 - 10748609
Alignment:
Q  260 gcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaatttt 357  Q
    ||||||||||||||||||||   ||||| |||||||||||| ||||||||| |||| ||||||        |||||| | |||||||||  ||||| |||    
T  10748493 gcttaaatatgaaaatagtctctgcaaacatctgacattttggttttagtccctgtaaaaatatttttttggttttaatccctgcaaatataaaaaattt 10748592  T
Q  358 ggttttggtccttggta 374  Q
    |||||||||||||||||    
T  10748593 ggttttggtccttggta 10748609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 30432980 - 30432920
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||| |||| ||||  |||||||||||||||||| ||||||||| ||||||||    
T  30432980 ggcttaaatatggaaatggtcccggcaaatatctgacattttggttttagtccctgtaaaa 30432920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 41594335 - 41594276
Alignment:
Q  260 gcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||| |||| ||||  |||||||||||||||||| ||||||||| ||||||||    
T  41594335 gcttaaatatggaaatggtccctgcaaatatctgacattttggttttagtccctgtaaaa 41594276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 13572853 - 13572796
Alignment:
Q  262 ttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||| || |||||||| ||||||||| |||||| || ||||||||    
T  13572853 ttaaatatgaaaatagttcttgcaaatatatgacattttggttttaatccctgtaaaa 13572796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 6879999 - 6880051
Alignment:
Q  258 tggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtc 310  Q
    |||||||||||||||||| ||||   ||||||||||||||||| |||||||||    
T  6879999 tggcttaaatatgaaaattgtccctacaaatatctgacattttggttttagtc 6880051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 17457708 - 17457776
Alignment:
Q  251 ttatttatggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||| | ||||||||||  |||||||| ||| ||||| ||||||||  ||||||||    
T  17457708 ttatttatggcttaaatgtaaaaatagtccctgcaaatatttgaaattttggttttagttcctgtaaaa 17457776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 32521860 - 32521801
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||||||||||| || |||||||  ||||||||| ||||||||| ||||||||    
T  32521860 ggcttaaatatgaaaatagttct-gcaaataattgacattttggttttagtccctgtaaaa 32521801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 310
Target Start/End: Complemental strand, 3948757 - 3948699
Alignment:
Q  252 tatttatggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtc 310  Q
    |||||| || ||||||||| |||| ||||||  ||||||||||| ||||||||||||||    
T  3948757 tatttaaggtttaaatatggaaatggtcctcataaatatctgacgttttagttttagtc 3948699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 13278177 - 13278127
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagt 309  Q
    ||||||||||| |||||||||   |||||||| ||||||||||||||||||    
T  13278177 ggcttaaatataaaaatagtctctgcaaatatttgacattttagttttagt 13278127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 37608949 - 37609014
Alignment:
Q  253 atttatggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||| |||||||||||||||| |||||  ||||| |||||||||||| ||||||||| ||| ||||    
T  37608949 atttaaggcttaaatatgaaaaaagtccctgcaaa-atctgacattttggttttagtcactggaaaa 37609014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 25318680 - 25318619
Alignment:
Q  258 tggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||| |||| ||||| ||||||||||| | |||| ||||||||| || |||||    
T  25318680 tggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctctaaaa 25318619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 41593952 - 41594009
Alignment:
Q  262 ttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||| |||||||||| |  |||||||||||| ||||| ||||||||| ||||||||    
T  41593952 ttaaatgtgaaaatagttcctgcaaatatctgatattttggttttagtccctgtaaaa 41594009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 13572470 - 13572530
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||| |||| ||||  ||||||||||| | |||||||||||||| || |||||    
T  13572470 ggcttaaatatggaaatggtccctgcaaatatctggcgttttagttttagtccctataaaa 13572530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 19204978 - 19204918
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||||||||  | ||||||| | |||||| |||||||||  |||||||    
T  19204978 ggcttaaatatgaaaatagtccctgtaaatatccgtcattttggttttagtccttgtaaaa 19204918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 29683174 - 29683234
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||| ||||  ||||||||||| | |||| ||||||||| || |||||    
T  29683174 ggcttaaatatgaaaatggtccctgcaaatatctggcgttttggttttagtccctataaaa 29683234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 37609340 - 37609280
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||| |||| ||||| ||||||||||| | |||| ||||||||| || |||||    
T  37609340 ggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctctaaaa 37609280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 3598800 - 3598738
Alignment:
Q  257 atggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| ||||||||| ||||||||    
T  3598800 atggcttaaatgtgaaaatagtccttgcaaatatctgacattttggttttagtccctgtaaaa 3598738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 43196893 - 43196959
Alignment:
Q  253 atttatggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||| ||||||||| ||||||||    
T  43196893 atttttggcttaaatatgaaaatagtccttacaaatatctgacattttggttttagtccctgtaaaa 43196959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 376
Target Start/End: Original strand, 10461335 - 10461462
Alignment:
Q  251 ttatttatggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaatta 348  Q
    |||||| |||||||||||||||||||||||  ||||||||| | |||||| |||||||||| ||| ||||||         ||||||| |||||||||      
T  10461335 ttatttttggcttaaatatgaaaatagtccctgcaaatatccgtcattttggttttagtctttgtaaaaatattttttttattttagtccctgcaaatat 10461434  T
Q  349 aaaaattttggttttggtccttggtatt 376  Q
    ||||| ||||||||||||||||||||||    
T  10461435 aaaaaatttggttttggtccttggtatt 10461462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 14869054 - 14868997
Alignment:
Q  262 ttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||| ||||||||    
T  14869054 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtcactgtaaaa 14868997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 254 - 319
Target Start/End: Original strand, 24490837 - 24490902
Alignment:
Q  254 tttatggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||| ||||||||| ||||||||||||  |||||||||||||||||| ||||||||| ||||||||    
T  24490837 tttaaggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaa 24490902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 6497577 - 6497517
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||| ||||  |||||||||||||||||| ||||||||| ||||||||    
T  6497577 ggcttaaatatgaaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaa 6497517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 22394122 - 22394182
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||| ||||  |||||||||||||||||| ||||||||| ||||||||    
T  22394122 ggcttaaatatgaaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaa 22394182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 4122576 - 4122694
Alignment:
Q  258 tggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaatannnnnnnngttttagt-cctgcaaattaaaaaattt 356  Q
    |||||||||||||||||||||||  |||||||| |||||||||  |||||||| |||||||| |         ||||||| |||||||||  ||||| ||    
T  4122576 tggcttaaatatgaaaatagtccctgcaaatatttgacattttgattttagtccctgtaaaa-aaaaaattgattttagtccctgcaaatataaaaaatt 4122674  T
Q  357 tggttttggtccttggtatt 376  Q
    ||||||||||||||||||||    
T  4122675 tggttttggtccttggtatt 4122694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 3598413 - 3598471
Alignment:
Q  261 cttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||| ||||  |||||||||||||||||| | ||||||| ||||||||    
T  3598413 cttaaatatgaaaatggtccctgcaaatatctgacattttggatttagtccctgtaaaa 3598471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 25329098 - 25329155
Alignment:
Q  262 ttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||||| ||||||||||||| |||||  |||||||  ||||||||    
T  25329098 ttaaatatgaaaatagtccccgcaaatatctgatattttgattttagttcctgtaaaa 25329155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 6542257 - 6542317
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||| || | ||||||||||||| ||||| |||||||||  |||||||    
T  6542257 ggcttaaatatgaaaattgttcccgcaaatatctgatattttggttttagtccatgtaaaa 6542317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 7133124 - 7133183
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    ||||||||||||||||| ||||| | |||||| || ||||||||||||||||||| |||||    
T  7133124 ggcttaaatatgaaaatggtcct-gtaaatatatggcattttagttttagtctctttaaaa 7133183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 5933123 - 5933174
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtc 310  Q
    ||||||||||||||||| ||||  |||||||| ||||||||| |||||||||    
T  5933123 ggcttaaatatgaaaattgtccctgcaaatatgtgacattttggttttagtc 5933174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 41137522 - 41137467
Alignment:
Q  262 ttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaa 317  Q
    |||||||||||||||||||  |||||||| ||| ||||| |||||||||| |||||    
T  41137522 ttaaatatgaaaatagtccctgcaaatatttgatatttttgttttagtctttgtaa 41137467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 7133515 - 7133465
Alignment:
Q  257 atggcttaaatatgaaaatagtcctcgcaaatatctgacattttagtttta 307  Q
    ||||||||||| |||||||||||  ||||||||||||| ||||| ||||||    
T  7133515 atggcttaaatgtgaaaatagtctccgcaaatatctgatattttggtttta 7133465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 24491228 - 24491168
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||| |||| ||||  ||||  |||||||||||| ||||||||| ||||||||    
T  24491228 ggcttaaatatggaaatggtccctgcaataatctgacattttggttttagtccctgtaaaa 24491168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 25521 - 25461
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaa 319  Q
    |||||||||||||||||||||| ||||||||||||| ||||| ||||||||| ||||||||    
T  25521 ggcttaaatatgaaaatagtccccgcaaatatctgatattttggttttagtccctgtaaaa 25461  T

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Target: scaffold0147; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 376
Target Start/End: Complemental strand, 25424 - 25377
Alignment:
Q  330 gttttagtcc-tgcaaattaaaaaattttggttttggtccttggtatt 376  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  25424 gttttagtccctgcaaattaaaaatttttggttttggtccttggtatt 25377  T

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Target: scaffold0103 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 43275 - 43394
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaattt 356  Q
    ||||||||| ||||||||||||  |||||||| ||||||||| ||||||||| |||| ||||||        |||||||| |||||||||  ||||| ||    
T  43275 ggcttaaatgtgaaaatagtccctgcaaatatttgacattttggttttagtccctgtaaaaatatattttttgttttagtccctgcaaatataaaaaatt 43374  T
Q  357 tggttttggtccttggtatt 376  Q
    ||||||||||||||||||||    
T  43375 tggttttggtccttggtatt 43394  T

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Target: scaffold0170 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 257 - 376
Target Start/End: Original strand, 8537 - 8659
Alignment:
Q  257 atggcttaaatatgaaaatagtcctcgcaaatatctgacattttag-ttttagtctctgt-aaaatannnnnnnngttttagt-cctgcaaattaaaaaa 353  Q
    ||||||||||||||||||| ||||  |||||||||| ||||||| | |||||||| |||| ||||||        |||||||| |||||||||  |||||    
T  8537 atggcttaaatatgaaaattgtccctgcaaatatctaacattttggtttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaa 8636  T
Q  354 ttttggttttggtccttggtatt 376  Q
     ||||||||||||||||||||||    
T  8637 atttggttttggtccttggtatt 8659  T

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Target: scaffold0126 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 36378 - 36317
Alignment:
Q  259 ggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgtaaaat 320  Q
    ||||||||||| ||||||||||  ||||||||||||| |||||||||||||| || ||||||    
T  36378 ggcttaaatataaaaatagtccctgcaaatatctgacgttttagttttagtccctataaaat 36317  T

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Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 118417 - 118298
Alignment:
Q  258 tggcttaaatatgaaaatagtcctcgcaaatatctgacattttagttttagtctctgt-aaaatannnnnnnngttttagtc-ctgcaaattaaaaaatt 355  Q
    ||||||||||||||||||  |||| |||||||||||| ||||| ||||| ||| |||| ||||||        ||||||||| ||||||||  ||||| |    
T  118417 tggcttaaatatgaaaattatcct-gcaaatatctgatattttggttttcgtccctgtaaaaatatttttttggttttagtcactgcaaatataaaaaat 118319  T
Q  356 ttggttttggtccttggtatt 376  Q
    |||||||||||||||||||||    
T  118318 ttggttttggtccttggtatt 118298  T

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