View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9359_low_50 (Length: 290)
Name: NF9359_low_50
Description: NF9359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9359_low_50 |
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Alignment Details
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 9 - 273
Target Start/End: Original strand, 10119294 - 10119574
Alignment:
| Q |
9 |
gataatacttgctttttgttttgtttaatttgtggggaaacaatctcttcgcaattattcttagaaatcttacaaagaacttaattatccaattgcattt |
108 |
Q |
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| T |
10119294 |
gataatacttgctttttgttttgtttaatttgtggggaaacaatctcttcgcaattattcttagaaatcttacaaagaactcaattatccaattgcattt |
10119393 |
T |
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| Q |
109 |
gcattttacatgcataagaaatcttaaaactattgttgatatatgtaactaaacatcgaaatgttacgaaactttgtatatacatgcaatataagtgttt |
208 |
Q |
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| T |
10119394 |
gcattttacatgcataagaaatcttaaaactattgttgatatatgtaactaaacatcgaaatgttacgaaactttgtatatacatgtaatataagtgttt |
10119493 |
T |
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| Q |
209 |
tagcataagt----------------ctcaaaattcaatttttcgtatatacactattatttttgcgatttcgcacatttt |
273 |
Q |
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| T |
10119494 |
tagcataagtcttcgcaaaaactaagctcaaaattcaaattttcgtatatacactattatttttgcgattttgcacatttt |
10119574 |
T |
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