View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9359_low_65 (Length: 242)
Name: NF9359_low_65
Description: NF9359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9359_low_65 |
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Alignment Details
Target: chr6 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 6036146 - 6035922
Alignment:
| Q |
1 |
tctagttaaggttttgatttataaagaccaacaattctatcctttggaaaatgtcatatttcaccataaagcttactttaaagtcttaaattcacatttc |
100 |
Q |
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| T |
6036146 |
tctagttaaggttttgagttataaataccaacaattatctcctttggaaaatgtcatatttcaccataaagcttactttaaagtcttaaattcacatttc |
6036047 |
T |
|
| Q |
101 |
atatatttcaattgttggattttaatatcataatcatagatacaaattagtgtgcgtacctttaggttctatagattcgagagatgatgagagaattgtt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6036046 |
atatatttcaattgttggattttaatatcataatcatagatacaaattagtgtgcatacctttaggttctatagattcgagagatgatgagagaattgtt |
6035947 |
T |
|
| Q |
201 |
atttgtagagaaagatgcaatatct |
225 |
Q |
| |
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||||||||||||||||||||||||| |
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|
| T |
6035946 |
atttgtagagaaagatgcaatatct |
6035922 |
T |
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