View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9359_low_72 (Length: 223)
Name: NF9359_low_72
Description: NF9359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9359_low_72 |
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Alignment Details
Target: chr1 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 14 - 211
Target Start/End: Complemental strand, 48495380 - 48495183
Alignment:
| Q |
14 |
tcatcaaattccacacaaaaatcatgttagaaataaatatatactttgtcttcatgtaacttataaggagattgtttcttaagagatacgtttcctttga |
113 |
Q |
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| T |
48495380 |
tcattaaattccacacaaaaatcatgttagaaataaatatatactttgtcttcatgtaacttataaggagattgtttcgtaagagatacgtttcctttga |
48495281 |
T |
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| Q |
114 |
taccaaaaacggagaattgtccattcttccttgttattttaccaaacctctttcatggcatgtttgacatcaactcaatagacacttcagtattatct |
211 |
Q |
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| T |
48495280 |
taccaaaaacggagaattgtccatttttccttgttattttatcaaacctctttcatggcatgtttgacatcaactcaatagacacttcagtattatct |
48495183 |
T |
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