View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9359_low_76 (Length: 212)
Name: NF9359_low_76
Description: NF9359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9359_low_76 |
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Alignment Details
Target: chr1 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 6014258 - 6014437
Alignment:
| Q |
13 |
gagtttggtgttaaagatttgttaaaccaaattctaccactcttgatgcaacctaatttggaaaatcatgagtagtggtgacctttaacatggttgggag |
112 |
Q |
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| T |
6014258 |
gagtttggtgttaaagatttgttaaaccaaattctaccactcttgatgcaacctaatttggaaaatcatgagtagtggtgacctttaacatggttgggag |
6014357 |
T |
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| Q |
113 |
cgacagtcgtccggggcactggtatttttagcaggcaatatgtatattatttatatatatgtttggaggatcgttatttt |
192 |
Q |
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| T |
6014358 |
cgacagtcgttcggggcactggtatttttagcaggcaatatgtatattatttatatatatgtttggaggatcgttatttt |
6014437 |
T |
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