View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9360_high_6 (Length: 323)
Name: NF9360_high_6
Description: NF9360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9360_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 6917841 - 6917535
Alignment:
| Q |
1 |
aagccatttgacttttcaacaccagtggacaaattatgttaacatcatagcctctcaaccaaccataacacaggcgtggaaacagcatgcatgtgtgcca |
100 |
Q |
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| T |
6917841 |
aagccatttgacttttcaacaccagtggacaaattatgttaacatcatagcctctcaaccaaccataacacaggcgtggaaacatcatgcatatgtgcca |
6917742 |
T |
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| Q |
101 |
agaacagtcatcaaatagtgcaaaaattacttatcacttggccctgcaccatctcttagtggaaactgagtgtttgtgatcaatattattattgaataat |
200 |
Q |
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| T |
6917741 |
agaacagtcatcaaatagtgcaaaaattacttatcacttggccctgcaccatctcttagtggaaactgagtgtttgtgatcaatattattattgaataat |
6917642 |
T |
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| Q |
201 |
aagtctgtgcatttagcattttatattgagtgtgctcaaacaacaagcaaaaggaaaatcagaacctatatgtttcggaatcaacctcgccgcgctcaat |
300 |
Q |
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| T |
6917641 |
aagtctgtgcatttagcattttatattgagtgtgctcaaacaacaagcaaatggaaaatcagaacctatatgtttcgaaatcaacctcgccgcgctcaat |
6917542 |
T |
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| Q |
301 |
cttgatg |
307 |
Q |
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||||||| |
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| T |
6917541 |
cttgatg |
6917535 |
T |
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