View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9360_low_37 (Length: 254)
Name: NF9360_low_37
Description: NF9360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9360_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 35752042 - 35751802
Alignment:
| Q |
1 |
tataattggtctgttaatggtttcatagttcatgcatcatttcaacacactaaccaatgacatagaatgagttggaaaatgaaagttaaa-ggtgcgcca |
99 |
Q |
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| T |
35752042 |
tataattggtctgttaatggtttcagagttcatgcatcatttcaacacactaaccaataacatagaatgagttggaaaatgaaagttaaaaggtgcgcca |
35751943 |
T |
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| Q |
100 |
ccattctttttataactttttgaaaggttctttgcatatttatttgacatctagagttttacatatatttatatggcttaggtcttatcttatttgtaga |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |
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| T |
35751942 |
ccattctttttataactttttgaaaggttctttgcatatttatttgacatctagagttttacatatatttatatggcttaggtcttatcatatttctaga |
35751843 |
T |
|
| Q |
200 |
ccatatattcaagtgaagaaaatataattttgggccctatg |
240 |
Q |
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| T |
35751842 |
ccatatattcaagtgaagaaaatataattttgggccctatg |
35751802 |
T |
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