View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9360_low_41 (Length: 243)
Name: NF9360_low_41
Description: NF9360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9360_low_41 |
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Alignment Details
Target: chr5 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 28053777 - 28053921
Alignment:
| Q |
18 |
actgcttccactcgacaatctagataacgaagcctccctttcaaaccttctatcaacatcaacaacatccttatccggcgaagacaccttcgccgaatcc |
117 |
Q |
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| T |
28053777 |
actgcttccactcgacaatctagataacgaagcctccctttcaaaccttctatcaacatcaacaacatccttatcaggcgaagacaccttctctgaatcc |
28053876 |
T |
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| Q |
118 |
ggaagcagaagctcacgatcctcctcgtcgtcttcatgtagaata |
162 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
28053877 |
ggaagcagaagctcacgatcctcctcgtcctcttcatgtagaata |
28053921 |
T |
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