View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9361A_high_33 (Length: 287)

Name: NF9361A_high_33
Description: NF9361A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9361A_high_33
NF9361A_high_33
[»] chr6 (42 HSPs)
chr6 (21-275)||(6349646-6349924)
chr6 (121-171)||(7930290-7930340)
chr6 (133-202)||(8776966-8777035)
chr6 (133-202)||(34595131-34595200)
chr6 (133-201)||(426508-426576)
chr6 (28-85)||(6334400-6334457)
chr6 (133-182)||(17841602-17841651)
chr6 (123-187)||(1681745-1681809)
chr6 (123-187)||(7801164-7801228)
chr6 (143-194)||(5462693-5462744)
chr6 (135-182)||(5970121-5970168)
chr6 (144-195)||(7151420-7151471)
chr6 (120-187)||(10770682-10770749)
chr6 (120-187)||(16766681-16766748)
chr6 (133-187)||(853867-853921)
chr6 (143-189)||(4118339-4118385)
chr6 (121-187)||(9107378-9107444)
chr6 (133-187)||(16833305-16833359)
chr6 (144-202)||(33001282-33001340)
chr6 (144-201)||(403858-403915)
chr6 (120-201)||(5732504-5732585)
chr6 (120-180)||(7938100-7938160)
chr6 (139-187)||(31384923-31384971)
chr6 (144-187)||(7086803-7086846)
chr6 (133-200)||(7977825-7977892)
chr6 (144-187)||(10842540-10842583)
chr6 (146-200)||(4864073-4864127)
chr6 (133-187)||(8365527-8365581)
chr6 (133-187)||(12696321-12696375)
chr6 (121-187)||(15489740-15489806)
chr6 (144-202)||(28715303-28715361)
chr6 (133-202)||(1191693-1191762)
chr6 (143-195)||(6327518-6327570)
chr6 (121-196)||(7027226-7027302)
chr6 (144-200)||(7265588-7265644)
chr6 (135-182)||(8713978-8714026)
chr6 (144-180)||(8805587-8805623)
chr6 (144-188)||(10888981-10889025)
chr6 (144-200)||(12627572-12627628)
chr6 (136-187)||(17302556-17302608)
chr6 (135-183)||(25096422-25096470)
chr6 (136-180)||(34225824-34225868)
[»] chr3 (36 HSPs)
chr3 (121-202)||(55401060-55401141)
chr3 (120-187)||(10268494-10268561)
chr3 (136-195)||(15314876-15314935)
chr3 (129-187)||(55212956-55213014)
chr3 (133-202)||(10954949-10955018)
chr3 (133-182)||(34910314-34910363)
chr3 (133-189)||(4987297-4987353)
chr3 (131-187)||(32804548-32804604)
chr3 (144-187)||(1509547-1509590)
chr3 (133-187)||(14209110-14209164)
chr3 (133-187)||(39756233-39756287)
chr3 (144-201)||(7928458-7928515)
chr3 (133-182)||(15796307-15796356)
chr3 (134-195)||(16192750-16192811)
chr3 (135-195)||(3164025-3164085)
chr3 (144-188)||(11313807-11313851)
chr3 (118-201)||(25775490-25775574)
chr3 (131-187)||(49651794-49651850)
chr3 (143-194)||(4201403-4201454)
chr3 (136-187)||(17568691-17568742)
chr3 (144-195)||(25948887-25948938)
chr3 (144-187)||(26508118-26508161)
chr3 (144-187)||(28918009-28918052)
chr3 (144-187)||(49505162-49505205)
chr3 (133-187)||(8587029-8587083)
chr3 (133-187)||(10335294-10335348)
chr3 (133-182)||(14747558-14747608)
chr3 (133-179)||(14979178-14979224)
chr3 (133-187)||(20503462-20503516)
chr3 (133-187)||(28812512-28812566)
chr3 (144-193)||(29508452-29508501)
chr3 (133-181)||(21479115-21479163)
chr3 (144-180)||(25064917-25064953)
chr3 (144-180)||(27277853-27277889)
chr3 (133-169)||(40052329-40052365)
chr3 (144-200)||(51206348-51206404)
[»] chr7 (22 HSPs)
chr7 (134-187)||(9408342-9408395)
chr7 (133-210)||(25481899-25481976)
chr7 (131-187)||(7438701-7438757)
chr7 (143-194)||(38143230-38143281)
chr7 (122-187)||(15902808-15902873)
chr7 (133-182)||(7973136-7973187)
chr7 (139-195)||(35297672-35297728)
chr7 (123-179)||(35861951-35862007)
chr7 (135-182)||(11831431-11831478)
chr7 (133-187)||(24339639-24339693)
chr7 (134-187)||(3991322-3991375)
chr7 (134-187)||(11061084-11061137)
chr7 (123-182)||(32094033-32094093)
chr7 (144-187)||(26033469-26033512)
chr7 (135-202)||(41020495-41020562)
chr7 (144-187)||(42720898-42720941)
chr7 (143-189)||(5233636-5233682)
chr7 (136-194)||(11665441-11665499)
chr7 (144-201)||(3721101-3721158)
chr7 (139-195)||(7058429-7058485)
chr7 (134-182)||(8234144-8234192)
chr7 (121-185)||(23191881-23191945)
[»] chr1 (40 HSPs)
chr1 (133-202)||(22881609-22881678)
chr1 (134-187)||(40258941-40258994)
chr1 (133-189)||(32461469-32461525)
chr1 (144-202)||(22515880-22515938)
chr1 (134-187)||(32434724-32434777)
chr1 (133-202)||(46348376-46348445)
chr1 (120-179)||(15323147-15323206)
chr1 (144-187)||(16164323-16164366)
chr1 (136-187)||(24577194-24577245)
chr1 (135-202)||(38078654-38078721)
chr1 (133-187)||(113296-113350)
chr1 (133-171)||(9103637-9103675)
chr1 (133-195)||(18556456-18556518)
chr1 (134-187)||(1864888-1864941)
chr1 (131-202)||(51410019-51410091)
chr1 (144-187)||(5927348-5927391)
chr1 (144-195)||(6427358-6427409)
chr1 (131-189)||(13011221-13011280)
chr1 (131-202)||(14332635-14332706)
chr1 (145-200)||(18337338-18337393)
chr1 (134-189)||(23738676-23738731)
chr1 (144-187)||(48450595-48450638)
chr1 (133-187)||(1815254-1815308)
chr1 (133-187)||(6612179-6612233)
chr1 (133-187)||(14359530-14359583)
chr1 (144-194)||(18190109-18190159)
chr1 (144-194)||(27471567-27471617)
chr1 (121-187)||(28273096-28273162)
chr1 (133-187)||(47989495-47989548)
chr1 (134-187)||(1705000-1705053)
chr1 (144-201)||(9709828-9709885)
chr1 (144-189)||(11605941-11605986)
chr1 (134-195)||(35999322-35999383)
chr1 (133-202)||(37598829-37598897)
chr1 (144-201)||(41877464-41877521)
chr1 (144-180)||(398780-398816)
chr1 (144-180)||(1486724-1486760)
chr1 (137-169)||(9449034-9449066)
chr1 (136-180)||(25272482-25272526)
chr1 (134-182)||(31672908-31672956)
[»] chr8 (29 HSPs)
chr8 (133-187)||(4298894-4298948)
chr8 (144-210)||(20873077-20873143)
chr8 (133-180)||(15816144-15816191)
chr8 (133-202)||(36450747-36450816)
chr8 (135-187)||(2572064-2572116)
chr8 (131-187)||(41831948-41832004)
chr8 (144-187)||(8342980-8343023)
chr8 (144-187)||(8343324-8343367)
chr8 (120-187)||(28383838-28383905)
chr8 (144-202)||(4948660-4948718)
chr8 (126-187)||(11927094-11927155)
chr8 (133-182)||(18170495-18170544)
chr8 (133-182)||(18634063-18634112)
chr8 (122-187)||(22197750-22197815)
chr8 (144-189)||(36934678-36934723)
chr8 (144-200)||(34897093-34897149)
chr8 (120-187)||(13436972-13437039)
chr8 (144-187)||(14731720-14731763)
chr8 (144-187)||(25566849-25566892)
chr8 (143-202)||(33405377-33405436)
chr8 (135-169)||(3677785-3677819)
chr8 (133-187)||(4786346-4786400)
chr8 (133-187)||(22651973-22652027)
chr8 (144-186)||(39954288-39954330)
chr8 (133-202)||(5813589-5813658)
chr8 (133-182)||(31556994-31557042)
chr8 (144-200)||(13844591-13844647)
chr8 (131-187)||(18407714-18407770)
chr8 (135-187)||(29447118-29447170)
[»] chr4 (35 HSPs)
chr4 (135-187)||(27706185-27706237)
chr4 (136-187)||(6485619-6485670)
chr4 (133-202)||(12895267-12895336)
chr4 (131-194)||(11931275-11931338)
chr4 (133-195)||(19482665-19482727)
chr4 (133-195)||(40742588-40742650)
chr4 (136-202)||(54580016-54580082)
chr4 (122-187)||(21945489-21945554)
chr4 (133-202)||(23292979-23293048)
chr4 (133-202)||(36409505-36409573)
chr4 (133-202)||(36423671-36423739)
chr4 (134-202)||(2361968-2362036)
chr4 (131-187)||(3947774-3947830)
chr4 (135-187)||(5775366-5775418)
chr4 (122-202)||(34306797-34306876)
chr4 (143-187)||(44081585-44081629)
chr4 (144-187)||(11596360-11596403)
chr4 (144-183)||(14465087-14465126)
chr4 (144-195)||(15029773-15029824)
chr4 (144-187)||(28964256-28964299)
chr4 (144-187)||(29205452-29205495)
chr4 (133-180)||(35158000-35158047)
chr4 (144-187)||(37203272-37203315)
chr4 (143-194)||(48139271-48139322)
chr4 (136-202)||(4157150-4157215)
chr4 (122-180)||(21539882-21539940)
chr4 (136-202)||(40179629-40179695)
chr4 (122-163)||(12628617-12628658)
chr4 (146-195)||(13134460-13134509)
chr4 (144-180)||(7214537-7214573)
chr4 (144-204)||(12797329-12797388)
chr4 (130-178)||(17446065-17446113)
chr4 (135-187)||(24613709-24613761)
chr4 (144-188)||(36635332-36635376)
chr4 (144-188)||(51701266-51701310)
[»] scaffold0011 (1 HSPs)
scaffold0011 (136-187)||(17757-17808)
[»] chr5 (27 HSPs)
chr5 (121-200)||(21191051-21191130)
chr5 (123-202)||(21576738-21576817)
chr5 (133-200)||(33178022-33178089)
chr5 (133-187)||(14674266-14674320)
chr5 (133-195)||(31084320-31084382)
chr5 (133-201)||(6247619-6247687)
chr5 (121-187)||(10298554-10298620)
chr5 (121-187)||(16203803-16203869)
chr5 (121-187)||(19579686-19579752)
chr5 (133-169)||(19552569-19552605)
chr5 (135-182)||(12159951-12159998)
chr5 (136-187)||(15405063-15405114)
chr5 (133-187)||(30135310-30135365)
chr5 (122-165)||(30183535-30183578)
chr5 (144-187)||(39698549-39698592)
chr5 (133-180)||(41995468-41995515)
chr5 (121-187)||(13287407-13287473)
chr5 (121-187)||(17177031-17177097)
chr5 (118-187)||(3966485-3966554)
chr5 (131-180)||(38464379-38464428)
chr5 (144-189)||(38749569-38749614)
chr5 (134-187)||(42893358-42893411)
chr5 (144-189)||(43001808-43001853)
chr5 (131-187)||(21542025-21542081)
chr5 (144-180)||(35017045-35017081)
chr5 (121-169)||(40000561-40000609)
chr5 (146-202)||(43564891-43564947)
[»] chr2 (24 HSPs)
chr2 (133-200)||(18421960-18422027)
chr2 (133-202)||(15972870-15972939)
chr2 (133-182)||(30335414-30335463)
chr2 (122-201)||(20473308-20473387)
chr2 (144-195)||(30717530-30717581)
chr2 (131-202)||(37411237-37411308)
chr2 (121-187)||(21374707-21374773)
chr2 (133-187)||(30404858-30404912)
chr2 (136-194)||(40361755-40361813)
chr2 (121-182)||(15657849-15657910)
chr2 (133-201)||(19536391-19536460)
chr2 (135-187)||(20539682-20539734)
chr2 (136-187)||(18841021-18841072)
chr2 (133-200)||(38117154-38117221)
chr2 (144-202)||(2438712-2438770)
chr2 (136-182)||(12940948-12940994)
chr2 (133-171)||(34337200-34337238)
chr2 (146-180)||(36409642-36409676)
chr2 (133-187)||(37558974-37559028)
chr2 (144-201)||(18255974-18256031)
chr2 (144-185)||(28677917-28677958)
chr2 (135-187)||(974746-974798)
chr2 (144-172)||(3415013-3415041)
chr2 (143-187)||(30527603-30527647)
[»] scaffold0361 (1 HSPs)
scaffold0361 (133-182)||(14527-14576)
[»] scaffold0136 (1 HSPs)
scaffold0136 (122-187)||(3857-3922)
[»] scaffold0027 (1 HSPs)
scaffold0027 (133-182)||(46679-46728)
[»] scaffold0227 (1 HSPs)
scaffold0227 (133-189)||(7317-7373)
[»] scaffold0103 (1 HSPs)
scaffold0103 (133-189)||(51808-51864)
[»] scaffold0223 (2 HSPs)
scaffold0223 (133-187)||(20169-20223)
scaffold0223 (120-179)||(19439-19498)
[»] scaffold0021 (1 HSPs)
scaffold0021 (133-187)||(130479-130533)
[»] scaffold0652 (1 HSPs)
scaffold0652 (121-202)||(455-536)
[»] scaffold0053 (1 HSPs)
scaffold0053 (133-202)||(8795-8864)
[»] scaffold0722 (1 HSPs)
scaffold0722 (121-200)||(7027-7106)
[»] scaffold0050 (1 HSPs)
scaffold0050 (135-202)||(70277-70344)
[»] scaffold0018 (1 HSPs)
scaffold0018 (133-187)||(178826-178881)
[»] scaffold0003 (1 HSPs)
scaffold0003 (133-180)||(241591-241638)
[»] scaffold0450 (1 HSPs)
scaffold0450 (131-169)||(8661-8699)
[»] scaffold0306 (1 HSPs)
scaffold0306 (133-182)||(13397-13446)
[»] scaffold0152 (1 HSPs)
scaffold0152 (133-182)||(21881-21930)
[»] scaffold0066 (1 HSPs)
scaffold0066 (133-182)||(33376-33425)


Alignment Details
Target: chr6 (Bit Score: 112; Significance: 1e-56; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 6349924 - 6349646
Alignment:
Q  21 agtgaatattttgtctcattttattgtttgttggtcctacctaacttaaggacaatgtgcttggccttactatgagctaa--gaaggacggatatgaata 118  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| ||||||| ||  |||||||   |||| |||||||||||||    
T  6349924 agtgaatattttgtctcatattatattttgttggtcctacctaacttaaggacaatgtggttggcctgacattgagctatatgaagtacggatatgaata 6349825  T
Q  119 c-----------tggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatg-----------tcga 196  Q
    |           |||||| | ||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||           ||||    
T  6349824 ccggatattacatggacattgatatgccgacataattaataatttgaaaaaattacataattcattgtaattacatgtgttgatgccgtgttgatgtcga 6349725  T
Q  197 acacgataagtgtcgatgtcggacaccaagacatgccttcgaagagttttcgtgcttcatagacattaactcatatatt 275  Q
    ||||||||||||| |||||||| |||| |||||||||||||| |||| ||||||||||||||||||||| |||||||||    
T  6349724 acacgataagtgtagatgtcgggcaccgagacatgccttcgaggagtgttcgtgcttcatagacattaagtcatatatt 6349646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 7930290 - 7930340
Alignment:
Q  121 ggacactaatatgccgacacaattaataatttgaaaaaatcacataattta 171  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  7930290 ggacactgacatgccgacacaattaataatttgaaaaaatcacataattta 7930340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 8777035 - 8776966
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||||| ||||||||||||||||||||| |||| | |||||||||| |||||| ||||| ||||||    
T  8777035 gccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcggacacga 8776966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 34595131 - 34595200
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||||| |||||||||||||||||||||||||| | |||||||||| |||| | ||||| ||||||    
T  34595131 gccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 34595200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 426576 - 426508
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacg 201  Q
    ||||||||| ||||||||||||||||||||||||||| | |||||||||| |||| | ||||| |||||    
T  426576 gccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcggacacg 426508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 6334457 - 6334400
Alignment:
Q  28 attttgtctcattttattgtttgttggtcctacctaacttaaggacaatgtgcttggc 85  Q
    |||||||||||| ||||  ||||||||||| ||||||||||||||||||||| |||||    
T  6334457 attttgtctcatattatattttgttggtcccacctaacttaaggacaatgtggttggc 6334400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 17841651 - 17841602
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    |||||||||  |||||||||||||||||||||||||||| ||||||||||    
T  17841651 gccgacacagctaataatttgaaaaaatcacataatttagtgtaattaca 17841602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 1681745 - 1681809
Alignment:
Q  123 acactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||| | |||||||||| |||||||||||||||||||| ||||| | |||||||||| ||||    
T  1681745 acactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaattacaagtgt 1681809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 7801228 - 7801164
Alignment:
Q  123 acactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||| | |||||||||| |||||||||||||||||||||||||| |  ||||||||| ||||    
T  7801228 acactaacacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgt 7801164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 5462693 - 5462744
Alignment:
Q  143 ttaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtc 194  Q
    |||||||||||| |||||||||||||| |||||||||| || ||||||||||    
T  5462693 ttaataatttgagaaaatcacataattcattgtaattatatatgttgatgtc 5462744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 5970168 - 5970121
Alignment:
Q  135 cgacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  5970168 cgacacagttaataatttgaaaaaatcacataattcagtgtaattaca 5970121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 7151420 - 7151471
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcg 195  Q
    |||||||||||||||||||||||||| | |||||||| |||||||| |||||    
T  7151420 taataatttgaaaaaatcacataattaagtgtaattatatgtgttggtgtcg 7151471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 10770749 - 10770682
Alignment:
Q  120 tggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||| | | ||| |||||| |||||||||||||||||||||||||| | |||||||||| ||||    
T  10770749 tggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgt 10770682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 16766681 - 16766748
Alignment:
Q  120 tggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||| | | |||||||||  |||||||||||||||||||||||||| | |||||||||| ||||    
T  16766681 tggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 16766748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 853921 - 853867
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||| |||||||||||||||||||||||||| | || ||||||| ||||    
T  853921 gccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgt 853867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 4118385 - 4118339
Alignment:
Q  143 ttaataatttgaaaaaatcacataatttattgtaattacatgtgttg 189  Q
    ||||||||||||||||||||||||||| | |||||||||| ||||||    
T  4118385 ttaataatttgaaaaaatcacataattaaatgtaattacaagtgttg 4118339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 9107444 - 9107378
Alignment:
Q  121 ggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||| | |||||||||  ||||||||||||||||||||| |||| | |||||||||| ||||    
T  9107444 ggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgt 9107378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 16833305 - 16833359
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||| ||||||||||||||||||||||| || | |||||||||| ||||    
T  16833305 gccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgt 16833359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 33001340 - 33001282
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||||||||||||||||||||| | |||||||| |||||| | ||||| ||||||    
T  33001340 taataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcggacacga 33001282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 403915 - 403858
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacg 201  Q
    |||||||||||||||||||||||||||| ||||| |||| |||| | ||||| |||||    
T  403915 taataatttgaaaaaatcacataatttagtgtaactacaagtgtcggtgtcggacacg 403858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 5732585 - 5732504
Alignment:
Q  120 tggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacg 201  Q
    |||||||| | | ||||||||  |||||||||||| ||||||||||| |||| |||||||| |||||| | ||||| |||||    
T  5732585 tggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtcggacacg 5732504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 7938100 - 7938160
Alignment:
Q  120 tggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaatta 180  Q
    |||||||| | | |||||||||  ||||||||||||||||||| |||||||| ||||||||    
T  7938100 tggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaatta 7938160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 187
Target Start/End: Original strand, 31384923 - 31384971
Alignment:
Q  139 acaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||| |||||||||||||||||||||||||| | |||||||||| ||||    
T  31384923 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtgt 31384971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 7086803 - 7086846
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||||| |||||||||||||||| |||||||| ||||||    
T  7086803 taataatttgagaaaatcacataatttagtgtaattatatgtgt 7086846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 7977892 - 7977825
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacac 200  Q
    |||||||||  ||||||||||||||||| |||||||| | |||||||||| |||| | ||||| ||||    
T  7977892 gccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcggacac 7977825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 10842540 - 10842583
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||||||||||||||||||| |||||| | ||||||    
T  10842540 taataatttgaaaaaatcacataatttagtgtaatcatatgtgt 10842583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 4864073 - 4864127
Alignment:
Q  146 ataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacac 200  Q
    ||||||||||||||| |||||||||| | |||||| |||||||| ||||| ||||    
T  4864073 ataatttgaaaaaatgacataatttaatttaattatatgtgttggtgtcggacac 4864127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 8365581 - 8365527
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||| |||||||||||||| |||||||||||   |||||||||| ||||    
T  8365581 gccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgt 8365527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 12696321 - 12696375
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||  ||||||||||||||||| |||||||| | |||||||||| ||||    
T  12696321 gccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgt 12696375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 15489806 - 15489740
Alignment:
Q  121 ggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||| | | |||||||| ||||||||||||||||| ||| |||| | |||||||||| ||||    
T  15489806 ggacactaacacgtcgacacaactaataatttgaaaaaattacacaattcaatgtaattacaagtgt 15489740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 28715303 - 28715361
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    ||||||||||||||||| |||||||| | |||||||||| |||| | ||||| ||||||    
T  28715303 taataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacacga 28715361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 1191762 - 1191693
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||||  ||||||||||||||| ||||| |||| | |||||||||| |||| ||||| | ||||||    
T  1191762 gccgacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcgatgttggacacga 1191693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 6327570 - 6327518
Alignment:
Q  143 ttaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcg 195  Q
    |||||||||||||||||| | |||||| | |||||||||| |||| |||||||    
T  6327570 ttaataatttgaaaaaattatataattaagtgtaattacaagtgtcgatgtcg 6327518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 7027226 - 7027302
Alignment:
Q  121 ggacactaatatgccgacacaattaataatttgaaaa-aatcacataatttattgtaattacatgtgttgatgtcga 196  Q
    ||||||||||| ||||||||   | |||||||||||| |||||||||||| | |||||||| |||||| | ||||||    
T  7027226 ggacactaatacgccgacacccctgataatttgaaaaaaatcacataattcagtgtaattatatgtgtcggtgtcga 7027302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 7265644 - 7265588
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacac 200  Q
    ||||||||||| |||||||||||||| | |||||||| |||||| | ||||| ||||    
T  7265644 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 7265588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 8713978 - 8714026
Alignment:
Q  135 cgacacaattaataatttg-aaaaaatcacataatttattgtaattaca 182  Q
    ||||||| ||||||||||| |||||||||||||||| | ||||||||||    
T  8713978 cgacacagttaataatttgaaaaaaatcacataattcagtgtaattaca 8714026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 8805623 - 8805587
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaatta 180  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  8805623 taataatttgagaaaatcacataatttagtgtaatta 8805587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 10889025 - 10888981
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgtt 188  Q
    ||||||||||| |||||||||||||||| ||| |||| |||||||    
T  10889025 taataatttgataaaatcacataatttagtgtgattatatgtgtt 10888981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 12627628 - 12627572
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacac 200  Q
    ||||||| |||||||||||||||||| | |||||| | |||||| ||||||| ||||    
T  12627628 taataatgtgaaaaaatcacataattcagtgtaataatatgtgtcgatgtcggacac 12627572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 17302556 - 17302608
Alignment:
Q  136 gacacaattaataatttgaaaa-aatcacataatttattgtaattacatgtgt 187  Q
    ||||||| |||||||||||||| |||||||||||| | |||||||||| ||||    
T  17302556 gacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagtgt 17302608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 25096422 - 25096470
Alignment:
Q  135 cgacacaattaataatttgaaaaaatcacataatttattgtaattacat 183  Q
    |||||| | ||||||||||| ||||||||||||| || |||||||||||    
T  25096422 cgacaccactaataatttgagaaaatcacataatctagtgtaattacat 25096470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 34225868 - 34225824
Alignment:
Q  136 gacacaattaataatttgaaaaaatcacataatttattgtaatta 180  Q
    ||||||| |||||||||||||||||| ||||||| | ||||||||    
T  34225868 gacacaactaataatttgaaaaaatcgcataattcagtgtaatta 34225824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 55401060 - 55401141
Alignment:
Q  121 ggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||||||||| |||||||||| |||| | ||||| ||||||    
T  55401060 ggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacga 55401141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 10268561 - 10268494
Alignment:
Q  120 tggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||| | | ||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||    
T  10268561 tggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgt 10268494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 15314935 - 15314876
Alignment:
Q  136 gacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcg 195  Q
    |||||||||| ||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  15314935 gacacaattattaatttgaaaaaatcacataatttagtgtaattatatgtgttggtgtcg 15314876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 55212956 - 55213014
Alignment:
Q  129 atatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||||||| |||||||||| |||||||||||||||||| || ||||||| ||||    
T  55212956 atatgccgacacagttaataattttaaaaaatcacataatttagtgcaattacaagtgt 55213014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 10954949 - 10955018
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||||| |||||||||||||||||||||||||| | |||||| ||| |||| | ||||| ||||||    
T  10954949 gccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcggacacga 10955018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 34910314 - 34910363
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    |||||||||| |||||||||||||||||||||||||| | ||||||||||    
T  34910314 gccgacacaactaataatttgaaaaaatcacataattcagtgtaattaca 34910363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 4987353 - 4987297
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttg 189  Q
    |||||||||  |||||||||||||||||||||||||| | |||||||||| ||||||    
T  4987353 gccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttg 4987297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 32804604 - 32804548
Alignment:
Q  131 atgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||||  |||||||||||| |||||||||||||||| |||||||| ||||||    
T  32804604 atgccgacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgt 32804548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 1509547 - 1509590
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  1509547 taataatttgaaaaaatcacataatttagtgtaattacaagtgt 1509590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 14209110 - 14209164
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||| ||||||||| |||||||||||||||| | |||||||||| ||||    
T  14209110 gccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgt 14209164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 39756233 - 39756287
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||| |||||||||||| |||||||||||||||||| | |||||||| ||||    
T  39756233 gccgacaaaattaataatttaaaaaaatcacataatttaatataattacaagtgt 39756287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 7928458 - 7928515
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacg 201  Q
    |||||||||||||||||||||||||| | |||||||| |||||| | ||||| |||||    
T  7928458 taataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacg 7928515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 15796356 - 15796307
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    ||||||||| |||||||||||||||||||| |||||| | ||||||||||    
T  15796356 gccgacacagttaataatttgaaaaaatcatataattcagtgtaattaca 15796307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 16192811 - 16192750
Alignment:
Q  134 ccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcg 195  Q
    |||||||  |||||||||||| ||||| |||||||| | |||||||| ||||||||||||||    
T  16192811 ccgacaccgttaataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcg 16192750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 3164085 - 3164025
Alignment:
Q  135 cgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcg 195  Q
    |||||||  |||||||||||||||||||||||||| | |||||  ||| ||||||||||||    
T  3164085 cgacacagctaataatttgaaaaaatcacataattcagtgtaagaacaagtgttgatgtcg 3164025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 11313851 - 11313807
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgtt 188  Q
    ||||||||||| |||||||||||||||| |||||||| |||||||    
T  11313851 taataatttgagaaaatcacataatttagtgtaattatatgtgtt 11313807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 201
Target Start/End: Original strand, 25775490 - 25775574
Alignment:
Q  118 actggacactaatatgccgacacaattaataatttgaaaa-aatcacataatttattgtaattacatgtgttgatgtcgaacacg 201  Q
    |||||||||| | | ||| ||||| ||||||||||||||| |||||||||||| | |||||||||| |||| | ||||| |||||    
T  25775490 actggacactgacacgccaacacatttaataatttgaaaataatcacataattcagtgtaattacaagtgtcggtgtcggacacg 25775574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 49651850 - 49651794
Alignment:
Q  131 atgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||||   |||||||||||||||||||||||||| | |||||||||| ||||    
T  49651850 atgccgacacggctaataatttgaaaaaatcacataattcactgtaattacaagtgt 49651794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 4201403 - 4201454
Alignment:
Q  143 ttaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtc 194  Q
    ||||||||||||||||||||||||||| | |||||||| || ||||| ||||    
T  4201403 ttaataatttgaaaaaatcacataattaagtgtaattatatatgttggtgtc 4201454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 17568742 - 17568691
Alignment:
Q  136 gacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||| ||||||||||||| ||||| |||||||||| |||||||||| ||||    
T  17568742 gacaccattaataatttgagaaaattacataatttaatgtaattacaagtgt 17568691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 25948938 - 25948887
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcg 195  Q
    |||||||||||||||||||||||||| | |||||||| | |||||| |||||    
T  25948938 taataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcg 25948887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 26508118 - 26508161
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||||||||||||||||| | |||||||||| ||||    
T  26508118 taataatttgaaaaaatcacataattcagtgtaattacaagtgt 26508161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 28918009 - 28918052
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||||||||||||||||| | |||||||||| ||||    
T  28918009 taataatttgaaaaaatcacataattcagtgtaattacaagtgt 28918052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 49505205 - 49505162
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||||| |||||||||||||||| |||||||| ||||||    
T  49505205 taataatttgagaaaatcacataatttagtgtaattatatgtgt 49505162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 8587083 - 8587029
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||  || ||||||||||||||||||||||| | |||||||||| ||||    
T  8587083 gccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgt 8587029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 10335348 - 10335294
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||| ||||||||||||||| ||||||| |||| ||||| |||| ||||    
T  10335348 gccgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgt 10335294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 14747558 - 14747608
Alignment:
Q  133 gccgacacaattaataatttgaaaa-aatcacataatttattgtaattaca 182  Q
    |||||||||  |||||||||||||| |||||||||||||| ||||||||||    
T  14747558 gccgacacagctaataatttgaaaaaaatcacataatttagtgtaattaca 14747608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 14979178 - 14979224
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaatt 179  Q
    |||||||||  |||||||||||||||||||||||||| | |||||||    
T  14979178 gccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 20503462 - 20503516
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||||  |||||||||||||||| |||||||| | |||||||||| ||||    
T  20503462 gccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgt 20503516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 28812512 - 28812566
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||| |||||||||||| ||||||||||||| | |||| ||||| ||||    
T  28812512 gccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgt 28812566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 29508452 - 29508501
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgt 193  Q
    ||||||||||||||||||| |||||| | |||||||| |||||| |||||    
T  29508452 taataatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgt 29508501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 21479115 - 21479163
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattac 181  Q
    |||||||||  ||||||||||||||||||||| |||| | |||||||||    
T  21479115 gccgacacagctaataatttgaaaaaatcacacaattcagtgtaattac 21479163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 25064917 - 25064953
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaatta 180  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  25064917 taatgatttgaaaaaatcacataatttagtgtaatta 25064953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 27277889 - 27277853
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaatta 180  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  27277889 taataatttgagaaaatcacataatttagtgtaatta 27277853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 40052329 - 40052365
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatt 169  Q
    |||||||||  ||||||||||||||||||||||||||    
T  40052329 gccgacacagctaataatttgaaaaaatcacataatt 40052365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 51206404 - 51206348
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacac 200  Q
    |||||||||||||||||||||||||| | ||||| |||| |||| | ||||| ||||    
T  51206404 taataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcggacac 51206348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 9408395 - 9408342
Alignment:
Q  134 ccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  9408395 ccgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagtgt 9408342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 25481899 - 25481976
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacgataagtgtc 210  Q
    |||||||||  |||||||||||||||||||||||||| | |||||||||| |||||| ||||| |||||||| |||||    
T  25481899 gccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcggacacgatatgtgtc 25481976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 7438701 - 7438757
Alignment:
Q  131 atgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||||| ||||||||||||||||||||||||||| | |||||||||| ||||    
T  7438701 atgccgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgt 7438757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 38143230 - 38143281
Alignment:
Q  143 ttaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtc 194  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  38143230 ttaataatttgaaaaaatcacataatttaatgtaattatatgtgttggtgtc 38143281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 15902808 - 15902873
Alignment:
Q  122 gacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||| | |||||||||| | ||||||||||| |||||||||||||||| |||||||| ||||||    
T  15902808 gacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgt 15902873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 7973187 - 7973136
Alignment:
Q  133 gccgacacaattaataatttgaa--aaaatcacataatttattgtaattaca 182  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||||||    
T  7973187 gccgacacaattaataatttgaaaaaaaatcacataatttaatgtaattaca 7973136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 35297728 - 35297672
Alignment:
Q  139 acaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcg 195  Q
    |||||||||||||||| |||||||||||||| ||| |||||| |||||||| |||||    
T  35297728 acaattaataatttgagaaaatcacataattcattataattatatgtgttggtgtcg 35297672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 35861951 - 35862007
Alignment:
Q  123 acactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaatt 179  Q
    ||||||| | |||||||||| |||||||||||||||||||||||||| | |||||||    
T  35861951 acactaacacgccgacacaactaataatttgaaaaaatcacataattcaatgtaatt 35862007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 11831431 - 11831478
Alignment:
Q  135 cgacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    |||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  11831431 cgacacaactaataatttgaaaaaatcatataatttagtgtaattaca 11831478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 24339639 - 24339693
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||  |||||||||||||||||||||||||| | |||||||||| ||||    
T  24339639 gccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 24339693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 3991322 - 3991375
Alignment:
Q  134 ccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||| |||||||||||||||||||||||||| | | |||||||| ||||    
T  3991322 ccgacacaactaataatttgaaaaaatcacataattcagtataattacaagtgt 3991375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 11061137 - 11061084
Alignment:
Q  134 ccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||  |||||||||||||||||||||||||||| | |||||||| ||||    
T  11061137 ccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgt 11061084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 32094093 - 32094033
Alignment:
Q  123 acactaatatgccgacacaattaataatttgaa-aaaatcacataatttattgtaattaca 182  Q
    ||||||| ||||| |||||| |||||||||||| |||||||||||||| | ||||||||||    
T  32094093 acactaacatgccaacacaactaataatttgaaaaaaatcacataattcagtgtaattaca 32094033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 26033512 - 26033469
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||||||||||||||||| | |||||||||| ||||    
T  26033512 taataatttgaaaaaatcacataattcagtgtaattacaagtgt 26033469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 41020495 - 41020562
Alignment:
Q  135 cgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||| |||||||||  ||||||||||||||||| |||||||| ||| || | ||| ||||||||    
T  41020495 cgacacaactaataatttacaaaaatcacataatttagtgtaattatatgcgtcggtgttgaacacga 41020562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 42720941 - 42720898
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||||||||||||||||| | |||||||| ||||||    
T  42720941 taataatttgaaaaaatcacataattaaatgtaattatatgtgt 42720898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 5233636 - 5233682
Alignment:
Q  143 ttaataatttgaaaaaatcacataatttattgtaattacatgtgttg 189  Q
    |||||||||||| ||||||||||||| || |||||||| ||||||||    
T  5233636 ttaataatttgagaaaatcacataatctagtgtaattatatgtgttg 5233682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 11665499 - 11665441
Alignment:
Q  136 gacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtc 194  Q
    ||||||| |||||||||||||||||||||||||| | | |||||| | |||| ||||||    
T  11665499 gacacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtc 11665441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 3721101 - 3721158
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacg 201  Q
    ||||||||||| |||||||||||||||| | |||||| |||||| | ||||| |||||    
T  3721101 taataatttgagaaaatcacataatttagtataattatatgtgtcggtgtcggacacg 3721158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 7058429 - 7058485
Alignment:
Q  139 acaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcg 195  Q
    |||| |||||||||||||||||||  ||||| | |||||||||| |||||| |||||    
T  7058429 acaactaataatttgaaaaaatcatgtaattcagtgtaattacaagtgttggtgtcg 7058485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 8234144 - 8234192
Alignment:
Q  134 ccgacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    ||||||||| ||||||||||||||||| |||||||| | |||| |||||    
T  8234144 ccgacacaactaataatttgaaaaaataacataattcagtgtagttaca 8234192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 23191881 - 23191945
Alignment:
Q  121 ggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgt 185  Q
    ||||||| ||| ||||||||   ||||||||||| ||||||||||| || | |||||||||||||    
T  23191881 ggacactgatacgccgacaccgctaataatttgagaaaatcacatatttcagtgtaattacatgt 23191945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 22881678 - 22881609
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||| |||| | ||||| ||||||    
T  22881678 gccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacga 22881609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 40258994 - 40258941
Alignment:
Q  134 ccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||| ||||    
T  40258994 ccgacacaattaataatttgaaaaaatcacataattcagtgtaattacaagtgt 40258941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 32461525 - 32461469
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttg 189  Q
    |||| ||||| |||||||||||||||||||||||||||| |||||||||| ||||||    
T  32461525 gccggcacaactaataatttgaaaaaatcacataatttaatgtaattacaagtgttg 32461469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 22515938 - 22515880
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||||||||||||||||||||||| |||||||||| |||| | ||||| ||||||    
T  22515938 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacga 22515880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 32434777 - 32434724
Alignment:
Q  134 ccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||||| ||||    
T  32434777 ccgacacaactaataatttgaaaaagtcacataattcattgtaattacaagtgt 32434724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 46348445 - 46348376
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||||  ||||||||||||||||||| |||||||| |||||||||| |||| | ||||| ||||||    
T  46348445 gccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcggacacga 46348376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 15323147 - 15323206
Alignment:
Q  120 tggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaatt 179  Q
    |||||||| | ||| ||| ||| ||||||||||||||||||||||||||||| |||||||    
T  15323147 tggacactgacatgtcgatacagttaataatttgaaaaaatcacataatttagtgtaatt 15323206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 16164366 - 16164323
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||||||||||||||||||| |||||||| ||||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgt 16164323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 24577245 - 24577194
Alignment:
Q  136 gacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||| |||||||||||||||||||||||||| | |||||||||| ||||    
T  24577245 gacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgt 24577194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 38078721 - 38078654
Alignment:
Q  135 cgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||  |||||||||||||||||||||||||| | |||||||||| |||| | ||||| ||||||    
T  38078721 cgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacacga 38078654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 113296 - 113350
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||  |||||||||||||||||||||||||| | |||||||||| ||||    
T  113296 gccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 113350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 9103637 - 9103675
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataattta 171  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  9103637 gccgacacagttaataatttgaaaaaatcacataattta 9103675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 18556518 - 18556456
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcg 195  Q
    |||||||||  |||||||||||||| ||||||||||||| |||||||||| || ||| |||||    
T  18556518 gccgacacagctaataatttgaaaatatcacataatttaatgtaattacaagtattggtgtcg 18556456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 1864941 - 1864888
Alignment:
Q  134 ccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||| |||||||||||| |||||||||||||| | |||||||| ||||||    
T  1864941 ccgacacagttaataatttgagaaaatcacataattcagtgtaattatatgtgt 1864888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 51410019 - 51410091
Alignment:
Q  131 atgccgacacaattaataatttgaaaa-aatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||||||  |||||||||||||| |||||||||||| | |||||||||| |||| | ||||| ||||||    
T  51410019 atgccgacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 51410091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 5927391 - 5927348
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||    
T  5927391 taataatttgaaaaaatcatataatttaatgtaattacaagtgt 5927348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 6427358 - 6427409
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcg 195  Q
    ||||||||||| |||||||||||||| | |||||||| |||||||| |||||    
T  6427358 taataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcg 6427409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 13011280 - 13011221
Alignment:
Q  131 atgccgacacaattaataatttgaaaaaa-tcacataatttattgtaattacatgtgttg 189  Q
    |||||||||||  |||||||||||||||| |||||||||| | |||||||||| ||||||    
T  13011280 atgccgacacagctaataatttgaaaaaaatcacataattaagtgtaattacaagtgttg 13011221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 14332706 - 14332635
Alignment:
Q  131 atgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    ||||| |||| | ||||||||||| |||||||||||||||| |||||||| |||| | | ||||| ||||||    
T  14332706 atgcccacaccactaataatttgagaaaatcacataatttagtgtaattatatgtctcggtgtcggacacga 14332635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 18337338 - 18337393
Alignment:
Q  145 aataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacac 200  Q
    ||||||||||||||||||||||||| | |||||||||| |||| | ||||| ||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 18337393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 23738676 - 23738731
Alignment:
Q  134 ccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttg 189  Q
    ||||||||  |||||||||||||||||||||||||| | || ||||| ||||||||    
T  23738676 ccgacacagctaataatttgaaaaaatcacataattcagtgcaattaaatgtgttg 23738731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 48450638 - 48450595
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||||||||||| |||||||||| |||||||||| ||||    
T  48450638 taataatttgaaaaaataacataatttagtgtaattacaagtgt 48450595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 1815254 - 1815308
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||| |||| |||| |||||||||||||||| | |||||||||| ||||    
T  1815254 gccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgt 1815308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 6612233 - 6612179
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||| ||| |||||||||||||||||| |||||||| | |||||||||| ||||    
T  6612233 gccgatacagttaataatttgaaaaaattacataattcagtgtaattacaagtgt 6612179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 14359583 - 14359530
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||  ||||||||||||||| |||||||||||| |||||||||| ||||    
T  14359583 gccgacacagctaataatttgaaaaa-tcacataatttagtgtaattacaagtgt 14359530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 18190159 - 18190109
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtc 194  Q
    ||||||||||||||||| |||||||| | |||||||||| |||| ||||||    
T  18190159 taataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtc 18190109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 27471617 - 27471567
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtc 194  Q
    ||||||||||| |||| ||||||||| | ||||||||||||||||| ||||    
T  27471617 taataatttgagaaaagcacataattcagtgtaattacatgtgttggtgtc 27471567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 28273162 - 28273096
Alignment:
Q  121 ggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||| | |||| ||||||| |||| |||||||||||||| |||||| | |||||||||| ||||    
T  28273162 ggacactgacatgctgacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgt 28273096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 47989495 - 47989548
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||||| |||||||| |||||||||||||||| | |||||||||| ||||    
T  47989495 gccgacacaat-aataatttaaaaaaatcacataattcagtgtaattacaagtgt 47989548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 1705053 - 1705000
Alignment:
Q  134 ccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||  |||||||||||||||||||||||||| |  ||||||||| ||||    
T  1705053 ccgacacatctaataatttgaaaaaatcacataattcagggtaattacaagtgt 1705000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 9709828 - 9709885
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacg 201  Q
    ||||||||||| ||||||||||||||  ||||||||| |||||| | ||||| |||||    
T  9709828 taataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgtcggacacg 9709885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 11605986 - 11605941
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttg 189  Q
    ||||||||||||||||||| |||||| | || ||||||||||||||    
T  11605986 taataatttgaaaaaatcatataattcagtgaaattacatgtgttg 11605941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 35999383 - 35999322
Alignment:
Q  134 ccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcg 195  Q
    |||| |||| ||||||||| | ||||||| |||||||| | |||||| ||||||||||||||    
T  35999383 ccgatacaactaataatttaagaaaatcatataatttagtataattatatgtgttgatgtcg 35999322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 37598829 - 37598897
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||||| ||||||||||||||||||||| |||| | |||||||| | |||| | ||||| ||||||    
T  37598829 gccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtcggacacga 37598897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 41877521 - 41877464
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacg 201  Q
    ||||||||||| ||||| |||||||||| |||||||||| |||| | ||||| |||||    
T  41877521 taataatttgagaaaattacataatttagtgtaattacaagtgtcggtgtcggacacg 41877464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 398816 - 398780
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaatta 180  Q
    |||||||||||||||||||||||||| | ||||||||    
T  398816 taataatttgaaaaaatcacataattcagtgtaatta 398780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 1486760 - 1486724
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaatta 180  Q
    |||||||||||||||||||||||||| | ||||||||    
T  1486760 taataatttgaaaaaatcacataattcagtgtaatta 1486724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 9449066 - 9449034
Alignment:
Q  137 acacaattaataatttgaaaaaatcacataatt 169  Q
    |||| ||||||||||||||||||||||||||||    
T  9449066 acaccattaataatttgaaaaaatcacataatt 9449034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 25272482 - 25272526
Alignment:
Q  136 gacacaattaataatttgaaaaaatcacataatttattgtaatta 180  Q
    |||||| |||| ||||||| |||||||||||||||| ||||||||    
T  25272482 gacacagttaacaatttgagaaaatcacataatttagtgtaatta 25272526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 31672956 - 31672908
Alignment:
Q  134 ccgacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    ||||||||  |||||||||||||||||||| ||||| | ||||||||||    
T  31672956 ccgacacagctaataatttgaaaaaatcacttaattcagtgtaattaca 31672908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 4298948 - 4298894
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||    
T  4298948 gccgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgt 4298894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 20873077 - 20873143
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacgataagtgtc 210  Q
    |||||||||||||||||||||||||||| |||||||||| |||| | ||||| |||||||| |||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgatacgtgtc 20873143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 15816191 - 15816144
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaatta 180  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||    
T  15816191 gccgacacaactaataatttgaaaaaatcacataatttagtgtaatta 15816144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 36450816 - 36450747
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||||| ||||||||||||||||||||| |||| | |||||||||| |||| | ||||| ||||||    
T  36450816 gccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcggacacga 36450747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 2572116 - 2572064
Alignment:
Q  135 cgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||  |||||||||||||||||||||||||||| |||||||||| ||||    
T  2572116 cgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgt 2572064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 41832004 - 41831948
Alignment:
Q  131 atgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||||| ||||||||||||||||||||||||||| | ||||| |||| ||||    
T  41832004 atgccgacacagttaataatttgaaaaaatcacataattcagtgtaactacaagtgt 41831948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 8342980 - 8343023
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  8342980 taataatttgaaaaaatcacataatttagtgtaattacaagtgt 8343023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 8343324 - 8343367
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  8343324 taataatttgaaaaaatcacataatttagtgtaattacaagtgt 8343367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 28383905 - 28383838
Alignment:
Q  120 tggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||   || |||| ||||||||||||| |||||||| ||||||||||| |||||||||||    
T  28383905 tggacactaatgcaccaacaccattaataatttgataaaatcacgtaatttattgttattacatgtgt 28383838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 4948660 - 4948718
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||||||||||||||||||||| | |||||||||| |||| | ||||| ||||||    
T  4948660 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 4948718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 11927155 - 11927094
Alignment:
Q  126 ctaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||| ||||||||  |||||||||||| |||||||||||||| | |||||||| ||||||    
T  11927155 ctaatacgccgacactgttaataatttgataaaatcacataattcagtgtaattatatgtgt 11927094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 18170544 - 18170495
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    |||||||||||||| ||||||||||||| |||||||| | ||||||||||    
T  18170544 gccgacacaattaaaaatttgaaaaaattacataattcaatgtaattaca 18170495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 18634112 - 18634063
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    |||||||||||||| ||||||||||||| |||||||| | ||||||||||    
T  18634112 gccgacacaattaaaaatttgaaaaaattacataattcaatgtaattaca 18634063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 22197815 - 22197750
Alignment:
Q  122 gacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||| | ||| |||||  ||||||||||||||| |||||||||||| |||||||||| ||||    
T  22197815 gacactaacacgccaacacagctaataatttgaaaaattcacataatttagtgtaattacaagtgt 22197750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 36934678 - 36934723
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttg 189  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||    
T  36934678 taataattcgaaaaaatcacataattcattgtaattatatgtgttg 36934723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 34897093 - 34897149
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacac 200  Q
    ||||||||||| |||||||||||||| | |||||||| |||||| ||||||| ||||    
T  34897093 taataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcggacac 34897149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 13437039 - 13436972
Alignment:
Q  120 tggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||| | | |||||||||  |||||||||||||||||||||||||| || ||||| ||| ||||    
T  13437039 tggacactgacacgccgacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgt 13436972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 14731720 - 14731763
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||||| |||||||||||||||| |||||||| ||||||    
T  14731720 taataatttgagaaaatcacataatttagtgtaattatatgtgt 14731763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 25566849 - 25566892
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||||||||||||||||| | |||||||||| ||||    
T  25566849 taataatttgaaaaaatcacataattcagtgtaattacaagtgt 25566892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 33405436 - 33405377
Alignment:
Q  143 ttaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||||||| |||| ||||||||||| |||||||| |||||| | ||||| ||||||    
T  33405436 ttaataatttgagaaaaacacataatttagtgtaattatatgtgtcggtgtcggacacga 33405377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 169
Target Start/End: Original strand, 3677785 - 3677819
Alignment:
Q  135 cgacacaattaataatttgaaaaaatcacataatt 169  Q
    |||||||||||||||||| ||||||||||||||||    
T  3677785 cgacacaattaataattttaaaaaatcacataatt 3677819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 4786400 - 4786346
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||| ||||||||||| | |||||||||||||| | |||||||| ||||||    
T  4786400 gccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgt 4786346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 22651973 - 22652027
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||  |||||||||||||||||||||||||| | | |||||||| ||||    
T  22651973 gccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgt 22652027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 39954330 - 39954288
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtg 186  Q
    ||||||||||| |||||||||||||||| |||||||| |||||    
T  39954330 taataatttgagaaaatcacataatttagtgtaattatatgtg 39954288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 5813589 - 5813658
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||||  ||||||||||||||| ||||||| |||| ||||| |||| |||| | ||||| ||||||    
T  5813589 gccgacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcggacacga 5813658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 31556994 - 31557042
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    ||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  31556994 gccgacacagttaataatttg-aaaaatcacataattcagtgtaattaca 31557042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 13844647 - 13844591
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacac 200  Q
    ||||||||||| |||||||||||||| | |||||||| |||||| | ||||| ||||    
T  13844647 taataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcggacac 13844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 18407714 - 18407770
Alignment:
Q  131 atgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||  ||||||||  |||||||||||||||| | |||||||||| ||||    
T  18407714 atgccgacacagctaataattcaaaaaaatcacataattcagtgtaattacaagtgt 18407770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 29447170 - 29447118
Alignment:
Q  135 cgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||| ||||||||||| |||||||||||||| | ||||| |||| ||||    
T  29447170 cgacacaactaataatttgagaaaatcacataattcaatgtaactacaagtgt 29447118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 27706237 - 27706185
Alignment:
Q  135 cgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||| ||||    
T  27706237 cgacacaattaataatttaaaaaaatcacataatttagtgtaattacaagtgt 27706185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 6485670 - 6485619
Alignment:
Q  136 gacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| ||||    
T  6485670 gacaaaattaataatttgaaaaaatcacataatttagtgtaattacaagtgt 6485619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 12895336 - 12895267
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||||| |||||||||||||||||||||||||||  |||||||| | |||| | ||||| ||||||    
T  12895336 gccgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtcggacacga 12895267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 11931275 - 11931338
Alignment:
Q  131 atgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtc 194  Q
    ||||||||||  |||||||| |||||||||||||||||||| ||||| || |||||| ||||||    
T  11931275 atgccgacaccgttaataatatgaaaaaatcacataatttagtgtaaatatatgtgtcgatgtc 11931338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 19482665 - 19482727
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcg 195  Q
    |||||||||| |||||||||||||| |||||||||||   |||||||||| |||||| |||||    
T  19482665 gccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtcg 19482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 40742588 - 40742650
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcg 195  Q
    |||||||| ||||||||||||| ||||||| ||||| || |||||||| |||||| |||||||    
T  40742588 gccgacaccattaataatttgagaaaatcatataatctagtgtaattatatgtgtcgatgtcg 40742650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 54580082 - 54580016
Alignment:
Q  136 gacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    ||||||| |||||||||||||||||||||||||| | |||||||| | |||| | ||||| ||||||    
T  54580082 gacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggacacga 54580016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 21945489 - 21945554
Alignment:
Q  122 gacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||| | |||||||||||  ||||||||||||||||| |||||||| | |||||||||| ||||    
T  21945489 gacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgt 21945554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 23293048 - 23292979
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||||  |||||||||||||||||||||||||| | | |||||||| |||| | ||||| ||||||    
T  23293048 gccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacacga 23292979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 36409573 - 36409505
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||| |||||||||| |||||| |||||||||||| |||||||| | |||| | ||||||||||||    
T  36409573 gccgacaccattaataatt-gaaaaagtcacataatttagtgtaattataggtgtcggtgtcgaacacga 36409505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 36423739 - 36423671
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||| |||||||||| |||||| |||||||||||| |||||||| | |||| | ||||||||||||    
T  36423739 gccgacaccattaataatt-gaaaaagtcacataatttagtgtaattataggtgtcggtgtcgaacacga 36423671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 2362036 - 2361968
Alignment:
Q  134 ccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    ||||||||  ||||||||||||||||| |||||||||| |||||||| | |||| | ||||| ||||||    
T  2362036 ccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtcggacacga 2361968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 3947830 - 3947774
Alignment:
Q  131 atgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||  |||||||||||||||||| ||||||| | |||||||||| ||||    
T  3947830 atgccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgt 3947774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 5775418 - 5775366
Alignment:
Q  135 cgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||| ||||||||||||| |||||||||||||| | |||||||| ||||||    
T  5775418 cgacaccattaataatttgagaaaatcacataattaagtgtaattatatgtgt 5775366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 34306876 - 34306797
Alignment:
Q  122 gacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||| ||| |||||||||| ||||||||||| ||||||| ||||| || |||||||||| |||| | ||||| ||||||    
T  34306876 gacactgatacgccgacacaactaataatttga-aaaatcagataatgtagtgtaattacaagtgtcggtgtcggacacga 34306797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 44081629 - 44081585
Alignment:
Q  143 ttaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||||||||||| |||||||| |||||||| ||||||    
T  44081629 ttaataatttgaaaaaatcatataatttaatgtaattatatgtgt 44081585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 11596403 - 11596360
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||||||||||||||||| | |||||||||| ||||    
T  11596403 taataatttgaaaaaatcacataattcagtgtaattacaagtgt 11596360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 14465126 - 14465087
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacat 183  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  14465126 taataatttgaaaaaatcacataattcaatgtaattacat 14465087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 15029773 - 15029824
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcg 195  Q
    |||||||||||||| ||||||||||| | |||||||| |||||||| |||||    
T  15029773 taataatttgaaaatatcacataattcagtgtaattatatgtgttggtgtcg 15029824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 28964299 - 28964256
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||||||||||||||||| | |||||||||| ||||    
T  28964299 taataatttgaaaaaatcacataattcagtgtaattacaagtgt 28964256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 29205452 - 29205495
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||||||||||||||||| | |||||||||| ||||    
T  29205452 taataatttgaaaaaatcacataattcagtgtaattacaagtgt 29205495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 35158047 - 35158000
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaatta 180  Q
    |||||| ||| |||||||||| ||||||||||||||||| ||||||||    
T  35158047 gccgacgcaactaataatttggaaaaatcacataatttagtgtaatta 35158000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 37203272 - 37203315
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||||||||||| |||||||||| |||||||||| ||||    
T  37203272 taataatttgaaaaaatgacataatttagtgtaattacaagtgt 37203315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 48139271 - 48139322
Alignment:
Q  143 ttaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtc 194  Q
    |||||||||||| | |||| ||||||||| |||||||| |||||||||||||    
T  48139271 ttaataatttgagataatctcataatttaatgtaattatatgtgttgatgtc 48139322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 4157150 - 4157215
Alignment:
Q  136 gacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    ||||||| |||||||||||||| ||||||||||||| || ||||||| |||| | ||||| ||||||    
T  4157150 gacacaactaataatttgaaaa-atcacataatttagtgcaattacaagtgtcggtgtcggacacga 4157215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 21539940 - 21539882
Alignment:
Q  122 gacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaatta 180  Q
    |||||| | |||||||||| ||||||||||| | ||||||| |||||||| ||||||||    
T  21539940 gacactgacatgccgacaccattaataatttaagaaaatcatataatttagtgtaatta 21539882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 40179695 - 40179629
Alignment:
Q  136 gacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    ||||| ||||||| |||||||||||||||||||| | |||||||| ||| || | ||||| ||||||    
T  40179695 gacaccattaatagtttgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcggacacga 40179629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 12628658 - 12628617
Alignment:
Q  122 gacactaatatgccgacacaattaataatttgaaaaaatcac 163  Q
    |||||| | ||||||||||| |||||||||||||||||||||    
T  12628658 gacactgacatgccgacacagttaataatttgaaaaaatcac 12628617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 13134460 - 13134509
Alignment:
Q  146 ataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcg 195  Q
    ||||||| | |||||||||||||||| |||||||| |||||| |||||||    
T  13134460 ataatttaagaaaatcacataatttagtgtaattatatgtgtcgatgtcg 13134509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 7214573 - 7214537
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaatta 180  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  7214573 taataatttgagaaaatcacataatttaatgtaatta 7214537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 12797388 - 12797329
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacgata 204  Q
    ||||||||||||||| |||||||||| | |||||||||| |||| | ||||| ||||||||    
T  12797388 taataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtgtcggacacgata 12797329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 178
Target Start/End: Original strand, 17446065 - 17446113
Alignment:
Q  130 tatgccgacacaattaataatttgaaaaaatcacataatttattgtaat 178  Q
    ||||||||||| | ||||||||| | |||||||||||||||| ||||||    
T  17446065 tatgccgacaccactaataatttaagaaaatcacataatttagtgtaat 17446113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 24613761 - 24613709
Alignment:
Q  135 cgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||| ||||||||||| |||||||||||||| | ||||| |||| ||||    
T  24613761 cgacacaactaataatttgagaaaatcacataattcaatgtaagtacaagtgt 24613709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 36635332 - 36635376
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgtt 188  Q
    ||||||||||| |||||||||||||| | |||||||| |||||||    
T  36635332 taataatttgagaaaatcacataattcagtgtaattatatgtgtt 36635376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 51701266 - 51701310
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgtt 188  Q
    ||||||||||||||||| |||||||| | |||||||||| |||||    
T  51701266 taataatttgaaaaaattacataattgagtgtaattacaagtgtt 51701310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 17808 - 17757
Alignment:
Q  136 gacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||| ||||    
T  17808 gacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgt 17757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 21191130 - 21191051
Alignment:
Q  121 ggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacac 200  Q
    ||||||| | |||||||||||  |||||||||||||||||||||||||| | |||||||||| |||| | ||||| ||||    
T  21191130 ggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 21191051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 21576817 - 21576738
Alignment:
Q  123 acactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    ||||| ||| ||| |||||  |||||||||||||||||||||||||| | |||||||||| |||| ||||||| ||||||    
T  21576817 acactgatacgccaacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcggacacga 21576738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 33178022 - 33178089
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacac 200  Q
    |||||||||| ||||||||| |||||||||||||||||| |||||||||| |||| | ||||| ||||    
T  33178022 gccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacac 33178089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 14674266 - 14674320
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||  |||||||||||||||||||||||||||| |||||||||| ||||    
T  14674266 gccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgt 14674320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 31084320 - 31084382
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcg 195  Q
    |||||||||  |||||||||||||||||||||||||| | |||||||||| |||| |||||||    
T  31084320 gccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcg 31084382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 6247619 - 6247687
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacg 201  Q
    |||||||||  |||||||||||||||||||||||||| | |||||||||| |||| | ||||| |||||    
T  6247619 gccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 6247687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 10298554 - 10298620
Alignment:
Q  121 ggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||| | |||||||||| ||||||||||||||| |||||||||  | |||||||||| ||||    
T  10298554 ggacactaacacgccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 10298620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 16203869 - 16203803
Alignment:
Q  121 ggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||| ||||||||||   ||||||||||| |||||| ||||||||| |||||||| ||||||    
T  16203869 ggacactaacatgccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgt 16203803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 19579686 - 19579752
Alignment:
Q  121 ggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||| ||| |||||||||  ||||||||||| |||||||||||||||| || ||||||| ||||    
T  19579686 ggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgt 19579752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 19552605 - 19552569
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatt 169  Q
    ||||||||| |||||||||||||||||||||||||||    
T  19552605 gccgacacagttaataatttgaaaaaatcacataatt 19552569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 12159951 - 12159998
Alignment:
Q  135 cgacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    |||||||| ||||||||| |||||| ||||||||||| ||||||||||    
T  12159951 cgacacaactaataatttaaaaaaaacacataatttaatgtaattaca 12159998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 15405114 - 15405063
Alignment:
Q  136 gacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||| ||||||||||||||||||| |||||| | |||||||||| ||||    
T  15405114 gacacaactaataatttgaaaaaatcatataattcaatgtaattacaagtgt 15405063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 30135310 - 30135365
Alignment:
Q  133 gccgacacaattaataatttg-aaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||| |||||||||| |||||||||||||| | |||||||||||| ||||    
T  30135310 gccgacacaactaataatttgaaaaaaatcacataactcattgtaattacaagtgt 30135365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 30183535 - 30183578
Alignment:
Q  122 gacactaatatgccgacacaattaataatttgaaaaaatcacat 165  Q
    |||||| |||||||||||||| |||||||||||||| |||||||    
T  30183535 gacactgatatgccgacacaactaataatttgaaaatatcacat 30183578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 39698549 - 39698592
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||||||||||||||||| | |||||||||| ||||    
T  39698549 taataatttgaaaaaatcacataattcagtgtaattacaagtgt 39698592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 41995468 - 41995515
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaatta 180  Q
    |||||||||| |||||||| ||||||||||||||||| | ||||||||    
T  41995468 gccgacacaactaataattcgaaaaaatcacataattcaatgtaatta 41995515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 13287473 - 13287407
Alignment:
Q  121 ggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||| | | |||||||  |||||||||||||||||||||||||| | ||||| |||| ||||    
T  13287473 ggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgt 13287407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 17177097 - 17177031
Alignment:
Q  121 ggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||| ||| ||| |||||  ||||||||||||||||||| | |||| |||||||||||| ||||    
T  17177097 ggacactgatacgccaacacagctaataatttgaaaaaatcaaaaaattcattgtaattacaagtgt 17177031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 3966485 - 3966554
Alignment:
Q  118 actggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||| | ||||||||||   ||||||||||| ||||||||| |||| | |||||||| ||||||    
T  3966485 actggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgt 3966554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 38464428 - 38464379
Alignment:
Q  131 atgccgacacaattaataatttgaaaaaatcacataatttattgtaatta 180  Q
    |||||||||||| ||||||||||| |||||||||| ||| |||| |||||    
T  38464428 atgccgacacaactaataatttgagaaaatcacattattcattgaaatta 38464379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 38749614 - 38749569
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttg 189  Q
    ||||||||||||||||| |||||||| | |||||||| ||||||||    
T  38749614 taataatttgaaaaaatgacataattcaatgtaattatatgtgttg 38749569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 42893358 - 42893411
Alignment:
Q  134 ccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||  |||||||||||||||||||||||||  | |||||||||| ||||    
T  42893358 ccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgt 42893411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 43001808 - 43001853
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttg 189  Q
    ||||||||||||||||| |||||||| | |||||||||| ||||||    
T  43001808 taataatttgaaaaaattacataattcagtgtaattacaagtgttg 43001853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 21542025 - 21542081
Alignment:
Q  131 atgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||| ||||||||| |||| || |||||||| | |||||||||| ||||    
T  21542025 atgccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgt 21542081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 35017045 - 35017081
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaatta 180  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  35017045 taataatttgagaaaatcacataatttagtgtaatta 35017081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 40000609 - 40000561
Alignment:
Q  121 ggacactaatatgccgacacaattaataatttgaaaaaatcacataatt 169  Q
    ||||||| | ||| ||||||  |||||||||||||||||||||||||||    
T  40000609 ggacactgacatgtcgacactcttaataatttgaaaaaatcacataatt 40000561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 43564891 - 43564947
Alignment:
Q  146 ataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||| ||||||||||||||||| |||||||| | |||| | ||||| ||||||    
T  43564891 ataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacga 43564947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 18421960 - 18422027
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacac 200  Q
    |||||||||||||||||||| |||| ||||||||||| | |||||||||| |||| | ||||||||||    
T  18421960 gccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtcgaacac 18422027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 15972870 - 15972939
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||||||||||||||||||||||| ||| |||| | |||||||||| |||| | ||||| ||||||    
T  15972870 gccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcggacacga 15972939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 30335414 - 30335463
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    |||||||||| ||||||||||||||||| |||||||||| ||||||||||    
T  30335414 gccgacacaactaataatttgaaaaaatgacataatttagtgtaattaca 30335463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 20473308 - 20473387
Alignment:
Q  122 gacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacg 201  Q
    |||||| | |||||||||||| ||||||||| ||||| ||| |||||| | |||||||||| |||| ||||||| |||||    
T  20473308 gacactgacatgccgacacaactaataatttaaaaaactcatataattcagtgtaattacaagtgtcgatgtcggacacg 20473387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 30717581 - 30717530
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcg 195  Q
    |||||||||||||||||||||||||| | |||||||||| |||| |||||||    
T  30717581 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcg 30717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 37411308 - 37411237
Alignment:
Q  131 atgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    ||||||||||   ||||||||||| |||||||||||||| | ||| |||| |||||| ||||||||||||||    
T  37411308 atgccgacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcgatgtcgaacacga 37411237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 21374773 - 21374707
Alignment:
Q  121 ggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||| | |||||||||  ||||||||||||||||| |||||||| | |||||||||| ||||    
T  21374773 ggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgt 21374707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 30404912 - 30404858
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||  ||||||||||||||||||||||||||| | |||||||||| ||||    
T  30404912 gccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgt 30404858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 40361813 - 40361755
Alignment:
Q  136 gacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtc 194  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||| || ||||| ||||    
T  40361813 gacactattaataatttgaaaaaattacataatttagtgtaattatatctgttggtgtc 40361755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 15657849 - 15657910
Alignment:
Q  121 ggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    ||||||||| | |||||| ||| |||||||||| ||||||||||||||| | ||||||||||    
T  15657849 ggacactaacacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattaca 15657910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 19536460 - 19536391
Alignment:
Q  133 gccgacacaattaataatttgaaaaaa-tcacataatttattgtaattacatgtgttgatgtcgaacacg 201  Q
    |||||||||| |||||||||||||||| |||||||||| | |||||||||| |||| | ||||| |||||    
T  19536460 gccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 19536391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 20539734 - 20539682
Alignment:
Q  135 cgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||  ||||||||||||||||||| |||||||| |||||||||| ||||    
T  20539734 cgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgt 20539682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 18841072 - 18841021
Alignment:
Q  136 gacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||| ||||||||||||||||| |||||||| | |||||||||| ||||    
T  18841072 gacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgt 18841021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 38117221 - 38117154
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacac 200  Q
    |||||||||  ||||||||||||||||||||||| ||   |||||||||| |||||| ||||| ||||    
T  38117221 gccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgttggtgtcggacac 38117154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 2438770 - 2438712
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    ||||||||| |||||||||||||||| | |||||||||| |||| | ||||| ||||||    
T  2438770 taataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 2438712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 12940994 - 12940948
Alignment:
Q  136 gacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    ||||||| ||||||||||||||||||| |||||| | ||||||||||    
T  12940994 gacacaactaataatttgaaaaaatcatataattcagtgtaattaca 12940948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 34337238 - 34337200
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataattta 171  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  34337238 gccgacacagttgataatttgaaaaaatcacataattta 34337200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 180
Target Start/End: Complemental strand, 36409676 - 36409642
Alignment:
Q  146 ataatttgaaaaaatcacataatttattgtaatta 180  Q
    |||||||||||||||||||||||||| ||||||||    
T  36409676 ataatttgaaaaaatcacataatttagtgtaatta 36409642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 37558974 - 37559028
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||  |||||||||| ||||||||||||||| | |||||||||| ||||    
T  37558974 gccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgt 37559028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 18256031 - 18255974
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacg 201  Q
    ||||||||| |||||||||||||||||| |||||||| | |||| | ||||| |||||    
T  18256031 taataatttaaaaaaatcacataatttaatgtaattagaagtgtcggtgtcggacacg 18255974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 28677917 - 28677958
Alignment:
Q  144 taataatttgaaaaaatcacataatttattgtaattacatgt 185  Q
    |||||||||||||||||||||||||| | |||||||| ||||    
T  28677917 taataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 974746 - 974798
Alignment:
Q  135 cgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||| |||||||||||||| ||||||| ||| | |||||||||| ||||    
T  974746 cgacacaactaataatttgaaaagatcacattattcagtgtaattacaagtgt 974798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 172
Target Start/End: Complemental strand, 3415041 - 3415013
Alignment:
Q  144 taataatttgaaaaaatcacataatttat 172  Q
    |||||||||||||||||||||||||||||    
T  3415041 taataatttgaaaaaatcacataatttat 3415013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 30527647 - 30527603
Alignment:
Q  143 ttaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||    
T  30527647 ttaataatttgagaaaatcatataatttagtgtaattatatgtgt 30527603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 14527 - 14576
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    |||||||||| |||||||||||||||||||||||||| | ||||||||||    
T  14527 gccgacacaactaataatttgaaaaaatcacataattcagtgtaattaca 14576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 3922 - 3857
Alignment:
Q  122 gacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||| ||||||||||||  |||||||||| |||||||||||||||| | |||||||||| ||||    
T  3922 gacactgatatgccgacacggttaataatttaaaaaaatcacataattcagtgtaattacaagtgt 3857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 46679 - 46728
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    ||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  46679 gccgacacagttaataatttgaaaaaatcacataattcagtgtaattaca 46728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 7373 - 7317
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttg 189  Q
    |||||||||| |||||||||| ||||||||||||||||| |||||||| | ||||||    
T  7373 gccgacacaactaataatttggaaaaatcacataatttagtgtaattataagtgttg 7317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 51808 - 51864
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttg 189  Q
    |||||||||  |||||||||||||||||||||||||| | |||||||||| ||||||    
T  51808 gccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttg 51864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 20169 - 20223
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    |||||||||  |||||||||||||||||||||||||| | |||||||||| ||||    
T  20169 gccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 20223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 19439 - 19498
Alignment:
Q  120 tggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaatt 179  Q
    |||||||| ||| ||| |||| ||| |||| ||||||||||||||||||||| |||||||    
T  19439 tggacactgatacgccaacaccatttataaattgaaaaaatcacataatttaatgtaatt 19498  T

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Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 130479 - 130533
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgt 187  Q
    ||||||||| |||||| |||||||||||||||||||| | |||||||||| ||||    
T  130479 gccgacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgt 130533  T

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Target: scaffold0652 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 202
Target Start/End: Complemental strand, 536 - 455
Alignment:
Q  121 ggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    ||||||| ||| ||||||||   ||||||||||||||||||||| |||| | |||||||||| |||| | ||||| ||||||    
T  536 ggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacga 455  T

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Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 8795 - 8864
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    |||||||||  ||||||||||||||||||| || ||||| |||||||||| |||| | ||||| ||||||    
T  8795 gccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtcggacacga 8864  T

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Target: scaffold0722 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 7106 - 7027
Alignment:
Q  121 ggacactaatatgccgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacac 200  Q
    ||||||| ||| | |||||||  ||||||||||||||||| |||||||||| | |||||||| |||| | ||||| ||||    
T  7106 ggacactgatacgtcgacacagctaataatttgaaaaaattacataatttagtataattacaagtgtaggtgtcggacac 7027  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 70277 - 70344
Alignment:
Q  135 cgacacaattaataatttgaaaaaatcacataatttattgtaattacatgtgttgatgtcgaacacga 202  Q
    ||||||| |||||||||||||||||| |||||||| | |||||||| | |||| | ||||| ||||||    
T  70277 cgacacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcggtgtcggacacga 70344  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 178881 - 178826
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatca-cataatttattgtaattacatgtgt 187  Q
    |||||||||| ||||||||||||||||||| ||||||| | |||||||||| ||||    
T  178881 gccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgt 178826  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 241591 - 241638
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaatta 180  Q
    |||||||||  |||||||||| ||||||||||||||||| ||||||||    
T  241591 gccgacacagctaataatttggaaaaatcacataatttagtgtaatta 241638  T

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Target: scaffold0450 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 8699 - 8661
Alignment:
Q  131 atgccgacacaattaataatttgaaaaaatcacataatt 169  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  8699 atgccgacacaactaataatttgaaaatatcacataatt 8661  T

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Target: scaffold0306 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 13397 - 13446
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    |||||||||| ||||||||||| |||||||||||||| | || |||||||    
T  13397 gccgacacaactaataatttgagaaaatcacataattcagtgcaattaca 13446  T

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Target: scaffold0152 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 21930 - 21881
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    |||||||||| ||||||||||| |||||||||||||| | || |||||||    
T  21930 gccgacacaactaataatttgagaaaatcacataattcagtgcaattaca 21881  T

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Target: scaffold0066 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 33425 - 33376
Alignment:
Q  133 gccgacacaattaataatttgaaaaaatcacataatttattgtaattaca 182  Q
    |||||||||  ||||||||||||||||| |||||||| | ||||||||||    
T  33425 gccgacacagctaataatttgaaaaaataacataattcagtgtaattaca 33376  T

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