View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9361A_high_43 (Length: 246)
Name: NF9361A_high_43
Description: NF9361A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9361A_high_43 |
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Alignment Details
Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 42686256 - 42686480
Alignment:
| Q |
1 |
tgagttcctctgtacctctctaattaacatatcgtagcttctggatattattttccttatactttatttatgacattccttttgtaacttccacacctgg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42686256 |
tgagttcctctgtacctctctaattaacatatcgtagcttctggatattattttccttatactttatttatgacattccttttgtaacttccacacctgg |
42686355 |
T |
|
| Q |
101 |
acaatggcattagttttagcacacatataacatgccattgtttacaccagttagcacctagaagaaatttcttatatatttcttaaatcaagttttattt |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42686356 |
acaatggcattagttttagcacacatataacatgccattgtttacaccagttagcacctagaagaaatttcttatatatttcttaaatcaagttttattt |
42686455 |
T |
|
| Q |
201 |
taccacctgatactaagatattctt |
225 |
Q |
| |
|
||||||||||||||||||||||||| |
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|
| T |
42686456 |
taccacctgatactaagatattctt |
42686480 |
T |
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