View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9361A_low_112 (Length: 296)
Name: NF9361A_low_112
Description: NF9361A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9361A_low_112 |
 | |
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| [»] chr8 (2 HSPs) |
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| [»] chr6 (1 HSPs) |
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| [»] chr4 (5 HSPs) |
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| [»] chr3 (3 HSPs) |
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| [»] chr2 (1 HSPs) |
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| [»] chr5 (2 HSPs) |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 259; Significance: 1e-144; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 18 - 296
Target Start/End: Complemental strand, 9442765 - 9442487
Alignment:
| Q |
18 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatttatacatgcttctgggagatacattgcaagaggcggatgcatcagttgcagcagcaagcc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9442765 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatctatacatgcttctgggagatacattgcaagaggcggatgcatcagttgcagcagcaagcc |
9442666 |
T |
|
| Q |
118 |
aagaagaaacaacgatgatgtggcatcaaagactaggccatatatcagaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagac |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9442665 |
aagaagaaacaacgatgatgtggcatcaaagactaggccatatgtctgaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagac |
9442566 |
T |
|
| Q |
218 |
agtaaatttaccattctgtgagcactgtgtgatgagtaagcaacatagattgaagtttgctagagtaactactagaagc |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9442565 |
agtaaatttaccattctgtgagcactgtgtgataagcaagcaacatagattgaagtttgctagagtaactactagaagc |
9442487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 24 - 296
Target Start/End: Complemental strand, 24597155 - 24596883
Alignment:
| Q |
24 |
gtggtgatgaaagcagaaaagatcacaagtaatttatacatgcttctgggagatacattgcaagaggcggatgcatcagttgcagcagcaagccaagaag |
123 |
Q |
| |
|
||||||||||||||| ||||| |||||| ||| ||||||||||| |||| |||||||||||||| || |||||| ||| | ||| |||||||||| |
|
|
| T |
24597155 |
gtggtgatgaaagcaaaaaagctcacaaacaatctatacatgcttgtgggggatacattgcaagatgctaatgcattgactgctgtagcgagccaagaag |
24597056 |
T |
|
| Q |
124 |
aaacaacgatgatgtggcatcaaagactaggccatatatcagaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagacagtaaa |
223 |
Q |
| |
|
|||| || ||| |||||||||| | ||||||||||||||| |||||||| ||||||| |||| ||||| ||||| || | |||||||||||||| || |
|
|
| T |
24597055 |
aaacgacaatggtgtggcatcataaactaggccatatatcggaacgtggtttgaaagctcttgaggaacaaaatcttctacctgggctcaagacagtgaa |
24596956 |
T |
|
| Q |
224 |
tttaccattctgtgagcactgtgtgatgagtaagcaacatagattgaagtttgctagagtaactactagaagc |
296 |
Q |
| |
|
||| | ||||||||||||||||||| || ||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
24596955 |
tttgtctttctgtgagcactgtgtgacaagcaagcaacatagattgaagttttccagagtaactactagaagc |
24596883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 18 - 296
Target Start/End: Complemental strand, 27877382 - 27877104
Alignment:
| Q |
18 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatttatacatgcttctgggagatacattgcaagaggcggatgcatcagttgcagcagcaagcc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27877382 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatctatacatgcttctgggagatacattgcaagaggcggatgcatcagttgcagcagcaagcc |
27877283 |
T |
|
| Q |
118 |
aagaagaaacaacgatgatgtggcatcaaagactaggccatatatcagaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagac |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27877282 |
aagaagaaacaacgatgatgtggcatcaaagactaggccatatgtctgaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagac |
27877183 |
T |
|
| Q |
218 |
agtaaatttaccattctgtgagcactgtgtgatgagtaagcaacatagattgaagtttgctagagtaactactagaagc |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27877182 |
agtaaatttaccattctgtgagcactgtgtgataagcaagcaacatagattgaagtttgctagagtaactactagaagc |
27877104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 259; Significance: 1e-144; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 18 - 296
Target Start/End: Complemental strand, 30948856 - 30948578
Alignment:
| Q |
18 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatttatacatgcttctgggagatacattgcaagaggcggatgcatcagttgcagcagcaagcc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
30948856 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatctatacatgcttctgggagatacattgcaagaggcggatgcatcggttgcagcagcaagcc |
30948757 |
T |
|
| Q |
118 |
aagaagaaacaacgatgatgtggcatcaaagactaggccatatatcagaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagac |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30948756 |
aagaagaaacaacgatgatgtggcatcaaagactaggccatatgtcagaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagac |
30948657 |
T |
|
| Q |
218 |
agtaaatttaccattctgtgagcactgtgtgatgagtaagcaacatagattgaagtttgctagagtaactactagaagc |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30948656 |
agtaaatttaccattctgtgagcactgtgtgataagcaagcaacatagattgaagtttgctagagtaactactagaagc |
30948578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 18 - 296
Target Start/End: Original strand, 42267547 - 42267825
Alignment:
| Q |
18 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatttatacatgcttctgggagatacattgcaagaggcggatgcatcagttgcagcagcaagcc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42267547 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatctatacatgcttctgggagatacattgcaagaggcggatgcatcagttgcagcagcaagcc |
42267646 |
T |
|
| Q |
118 |
aagaagaaacaacgatgatgtggcatcaaagactaggccatatatcagaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagac |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42267647 |
aagaagaaacaacgatgatgtggcatcaaagactaggccatatgtctgaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagac |
42267746 |
T |
|
| Q |
218 |
agtaaatttaccattctgtgagcactgtgtgatgagtaagcaacatagattgaagtttgctagagtaactactagaagc |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42267747 |
agtaaatttaccattctgtgagcactgtgtgataagcaagcaacatagattgaagtttgctagagtaactactagaagc |
42267825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 18 - 296
Target Start/End: Complemental strand, 48700494 - 48700216
Alignment:
| Q |
18 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatttatacatgcttctgggagatacattgcaagaggcggatgcatcagttgcagcagcaagcc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48700494 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatctatacatgcttctgggagatacattgcaagaggcggatgcatcagttgcagcagcaagcc |
48700395 |
T |
|
| Q |
118 |
aagaagaaacaacgatgatgtggcatcaaagactaggccatatatcagaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagac |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48700394 |
aagaagaaacaacgatgatgtggcatcaaagactaggccatatgtctgaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagac |
48700295 |
T |
|
| Q |
218 |
agtaaatttaccattctgtgagcactgtgtgatgagtaagcaacatagattgaagtttgctagagtaactactagaagc |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48700294 |
agtaaatttaccattctgtgagcactgtgtgataagcaagcaacatagattgaagtttgctagagtaactactagaagc |
48700216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 24 - 296
Target Start/End: Original strand, 2000535 - 2000807
Alignment:
| Q |
24 |
gtggtgatgaaagcagaaaagatcacaagtaatttatacatgcttctgggagatacattgcaagaggcggatgcatcagttgcagcagcaagccaagaag |
123 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| ||||||||||| |||| |||| ||||||||| || |||||| || | |||||||||||||| |
|
|
| T |
2000535 |
gtggtgatgaaagcagaaaagctcacaaataatctatacatgcttgtgggggatatattgcaagatgctaatgcattgactgttgtagcaagccaagaag |
2000634 |
T |
|
| Q |
124 |
aaacaacgatgatgtggcatcaaagactaggccatatatcagaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagacagtaaa |
223 |
Q |
| |
|
||| || ||| |||||||||| | |||||||||||| || |||| ||| ||||||| |||| ||||| ||||| || | |||||||||||| | || |
|
|
| T |
2000635 |
aaatgacaatggtgtggcatcacaaactaggccatatgtcggaacatggtttgaaagctcttgcggaacaaaatcttctacctgggctcaagacaatgaa |
2000734 |
T |
|
| Q |
224 |
tttaccattctgtgagcactgtgtgatgagtaagcaacatagattgaagtttgctagagtaactactagaagc |
296 |
Q |
| |
|
||| | ||||||||||||||||||| || ||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
2000735 |
tttgtctttctgtgagcactgtgtgacaagcaagcaacatagattgaagttttctatagtaactactagaagc |
2000807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 21513708 - 21513658
Alignment:
| Q |
18 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatttatacatgctt |
68 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
21513708 |
aatcttgtggtgataaaagcagaaaagatgacaagtaatttatacatgctt |
21513658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 18 - 296
Target Start/End: Complemental strand, 5821948 - 5821670
Alignment:
| Q |
18 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatttatacatgcttctgggagatacattgcaagaggcggatgcatcagttgcagcagcaagcc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5821948 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatctatacatgcttctgggagatacattgcaagaggcggatgcatcagttgcagcagcaagcc |
5821849 |
T |
|
| Q |
118 |
aagaagaaacaacgatgatgtggcatcaaagactaggccatatatcagaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagac |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5821848 |
aagaagaaacaacgatgatgtggcatcaaagactaggccatatgtctgaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagac |
5821749 |
T |
|
| Q |
218 |
agtaaatttaccattctgtgagcactgtgtgatgagtaagcaacatagattgaagtttgctagagtaactactagaagc |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5821748 |
agtaaatttaccattctgtgagcactgtgtgataagcaagcaacatagattgaagtttgctagagtaactactagaagc |
5821670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 18 - 296
Target Start/End: Complemental strand, 2815936 - 2815658
Alignment:
| Q |
18 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatttatacatgcttctgggagatacattgcaagaggcggatgcatcagttgcagcagcaagcc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2815936 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatctatacatgcttctgggagatacattgcaagaggcggatacatcagttgcagcagcaagcc |
2815837 |
T |
|
| Q |
118 |
aagaagaaacaacgatgatgtggcatcaaagactaggccatatatcagaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagac |
217 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
2815836 |
aagaagaaacaatgatgacgtggcatcaaagactaggccatatgtcataacgtggcttgaaagtccttgcggaacgcaatctccttcacgggctcaattc |
2815737 |
T |
|
| Q |
218 |
agtaaatttaccattctgtgagcactgtgtgatgagtaagcaacatagattgaagtttgctagagtaactactagaagc |
296 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2815736 |
agtaaatttaccattttgtgagcactgtgtgataagcaagcaacatagattgaagtttgctagagtaactactagaagc |
2815658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 24 - 296
Target Start/End: Original strand, 42586601 - 42586873
Alignment:
| Q |
24 |
gtggtgatgaaagcagaaaagatcacaagtaatttatacatgcttctgggagatacattgcaagaggcggatgcatcagttgcagcagcaagccaagaag |
123 |
Q |
| |
|
||||||||||||||||||||| |||| | ||| ||||||||||| |||| |||||||||||||| || |||||| ||| | ||| |||||||||| |
|
|
| T |
42586601 |
gtggtgatgaaagcagaaaagctcactaacaatctatacatgcttgtgggggatacattgcaagacgctaatgcattgactgctgtagcgagccaagaag |
42586700 |
T |
|
| Q |
124 |
aaacaacgatgatgtggcatcaaagactaggccatatatcagaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagacagtaaa |
223 |
Q |
| |
|
|||| || ||| |||||||||| | |||||||||||| || |||||||| ||||||| |||| ||||| ||||| || | |||||||||||| | || |
|
|
| T |
42586701 |
aaacgacaatggtgtggcatcataaactaggccatatgtcggaacgtggtttgaaagctcttgcggaacaaaatcttctacctgggctcaagacaatgaa |
42586800 |
T |
|
| Q |
224 |
tttaccattctgtgagcactgtgtgatgagtaagcaacatagattgaagtttgctagagtaactactagaagc |
296 |
Q |
| |
|
||| | ||||||||||||||||||| || ||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
42586801 |
tttgtctttctgtgagcactgtgtgacaagcaagcaacatagattgaagttttccagagtaactactagaagc |
42586873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 18 - 296
Target Start/End: Original strand, 827123 - 827401
Alignment:
| Q |
18 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatttatacatgcttctgggagatacattgcaagaggcggatgcatcagttgcagcagcaagcc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
827123 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatctatacatgcttctgggagatacattgcaagaggaggatgcatcagttgcagcagcaagcc |
827222 |
T |
|
| Q |
118 |
aagaagaaacaacgatgatgtggcatcaaagactaggccatatatcagaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagac |
217 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
827223 |
aagaagaaacaacgatgatgtgacatcaaagactaggccatatgtctgaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagac |
827322 |
T |
|
| Q |
218 |
agtaaatttaccattctgtgagcactgtgtgatgagtaagcaacatagattgaagtttgctagagtaactactagaagc |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
827323 |
agtaaatttaccattctgtgagcactgtgtgataagcaagcaacatagattgaagtttgctagagtaactactagaagc |
827401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 18 - 296
Target Start/End: Original strand, 41720054 - 41720332
Alignment:
| Q |
18 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatttatacatgcttctgggagatacattgcaagaggcggatgcatcagttgcagcagcaagcc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||| |
|
|
| T |
41720054 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatctatacatgcttctgggagatacgttgcaagaggccgatgcatcagttgcagcatcaagcc |
41720153 |
T |
|
| Q |
118 |
aagaagaaacaacgatgatgtggcatcaaagactaggccatatatcagaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagac |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
41720154 |
aagaagaaacaacgatgatgtggcatcaaagactaggccatatgtcagaacgtggcttgaaagtccttgcggaacgcaatctccttcacgggctcaaggc |
41720253 |
T |
|
| Q |
218 |
agtaaatttaccattctgtgagcactgtgtgatgagtaagcaacatagattgaagtttgctagagtaactactagaagc |
296 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41720254 |
agtaaatttaccattttgtgagcactgtgtgataagcaagcaacatagattgaagtttgctagagtaactactagaagc |
41720332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 18 - 296
Target Start/End: Original strand, 34353654 - 34353932
Alignment:
| Q |
18 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatttatacatgcttctgggagatacattgcaagaggcggatgcatcagttgcagcagcaagcc |
117 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| ||||||||||||| || ||||| |||||||||| |||||||||||||||||| |||||| |
|
|
| T |
34353654 |
aatcttgtggtgataaaagcagaaaagatcacaagtaatctatacatgcttctaggggatacgttgcaagaggtcgatgcatcagttgcagcatcaagcc |
34353753 |
T |
|
| Q |
118 |
aagaagaaacaacgatgatgtggcatcaaagactaggccatatatcagaacgtggcttgaaagtccttgtggaacgcaatctccttcacgggctcaagac |
217 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
34353754 |
aagaagaaacagcgatgatgtggcatcaaagactaggccatatgtcagaacgtggcttgaaagtccttgctgaacgcaatctccttcacgggctcaaggc |
34353853 |
T |
|
| Q |
218 |
agtaaatttaccattctgtgagcactgtgtgatgagtaagcaacatagattgaagtttgctagagtaactactagaagc |
296 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
34353854 |
agtaaatttaccattttgtgagcactgtgtgataagcaagcaacatagattgaagtttgctagagtaactactaaaagc |
34353932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 18 - 296
Target Start/End: Complemental strand, 8137132 - 8136858
Alignment:
| Q |
18 |
aatcttgtggtgatgaaagcagaaaagatcacaagtaatttatacatgcttctgggagatacattgcaaga---ggcggatgcatcagttgcagcagcaa |
114 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||||||| ||||||||||| |||||| | | ||||||||||||| |||||| |||| |
|
|
| T |
8137132 |
aatcttgtggtgatgaaagaagaaaatatcacaagtaatctatacatgctt---------acattgttatattaggcggatgcatcaattgcagttgcaa |
8137042 |
T |
|
| Q |
115 |
gccaagaagaaacaacgatgatgtggcatcaaagactaggccatatatcagaacgtggcttgaaagtcctt-gtggaacgcaatctcctt-cacgggctc |
212 |
Q |
| |
|
||||| |||||||||||||||||||| ||| | |||||||||||||| |||| |||||| |||| | ||| | |||||||||||||||| ||| |||| |
|
|
| T |
8137041 |
gccaaaaagaaacaacgatgatgtggtatcgcaaactaggccatatattagaatgtggctggaaatttctttgcggaacgcaatctcctttcacaggctg |
8136942 |
T |
|
| Q |
213 |
aagacagtaaatttaccattctgtgagcactgtgtgatgagtaagcaacatagattgaagtttgctagagtaactactagaagc |
296 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8136941 |
aagacggtaaacttaccattctgtgagcactgtgtgataagcaagcaacatagattgaagtttgctagagtaactactagaagc |
8136858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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