View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9361A_low_125 (Length: 286)
Name: NF9361A_low_125
Description: NF9361A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9361A_low_125 |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 35485366 - 35485647
Alignment:
| Q |
1 |
ataaaattaaaataaaaagggaacaaagataggaaagcaaaggacctgacacggtataaccacacaatcaaaccataacaggtgatatataacttgtcaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
35485366 |
ataaaattaaaataaaaagggaacaaagataggaaagcaaaggacctgacacggtataaccacacaatcaaaccataacaggtgatatataacttttcaa |
35485465 |
T |
|
| Q |
101 |
------cacaagagtgaaacaaaaaagagtaacaacaaccttaaacgagtattaagcaaaacctaaacaaacattatccaagacaatctcacagactcat |
194 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35485466 |
gttcaacacaagagtgaaacaaaaaagagtaacaacaaccttaaacgagtattaaacaaaacctaaacaaacattatccaagacaatctcacagactcat |
35485565 |
T |
|
| Q |
195 |
gtatgagtgcaaaaccaaattgcagaaaaagcgaagtgagtgttcagagtatctaaactagcgtatgaattatatgtcaacac |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |
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| T |
35485566 |
gtatgagtgcaaaaccaaattgcagaaaaagcgaagtgagtgttcagagtatctaaactagcg-atgaatcatatgtcaacac |
35485647 |
T |
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