View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9361A_low_143 (Length: 268)
Name: NF9361A_low_143
Description: NF9361A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9361A_low_143 |
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Alignment Details
Target: chr1 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 7 - 262
Target Start/End: Complemental strand, 48684580 - 48684325
Alignment:
| Q |
7 |
tcaataaccaaaatcatacatatctccaaacctaaatactacaatagtcatggttggaaaacaccaatacttaaacttcttccttatttttctttctttg |
106 |
Q |
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| T |
48684580 |
tcaataaccaaaatcatacatatctccaaacctaaatactacaatagtcatggttggaaaacaccaatactttaacttcttccttatttttctttctttg |
48684481 |
T |
|
| Q |
107 |
tccttgttgtgcatccaatatgggatgtcaaggccactgaacaccttggaactaaaagagagtatctttatgaaatcacgacacaatatggttgtgaaga |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
48684480 |
tccttgttgtgcatccaatatgggatgtcaaggccactgaacaccttggaactaaaagagagtatctttatgaaatcaccacacaatatggttgtgaaga |
48684381 |
T |
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| Q |
207 |
actccttggttgtggaaggtcataaacagaataaaaacattaggagactggaaatt |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48684380 |
actccttggttgtggaaggtcataaacagaataaaaacattaggagactggaaatt |
48684325 |
T |
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