View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9361A_low_17 (Length: 450)

Name: NF9361A_low_17
Description: NF9361A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9361A_low_17
NF9361A_low_17
[»] chr8 (28 HSPs)
chr8 (1-104)||(40584382-40584485)
chr8 (344-435)||(40584557-40584648)
chr8 (209-323)||(15882230-15882344)
chr8 (210-323)||(40891044-40891156)
chr8 (209-350)||(38629504-38629652)
chr8 (209-323)||(29780987-29781100)
chr8 (209-314)||(37114268-37114372)
chr8 (209-323)||(17426656-17426771)
chr8 (209-323)||(23940832-23940946)
chr8 (209-323)||(38520048-38520161)
chr8 (209-323)||(12234496-12234610)
chr8 (250-323)||(4262004-4262077)
chr8 (208-314)||(38405167-38405273)
chr8 (210-323)||(24741851-24741963)
chr8 (249-320)||(11828627-11828698)
chr8 (209-349)||(24211272-24211419)
chr8 (209-314)||(8210353-8210457)
chr8 (209-323)||(33100673-33100786)
chr8 (250-323)||(14834700-14834770)
chr8 (253-323)||(35467243-35467313)
chr8 (254-323)||(9775226-9775297)
chr8 (250-301)||(25264277-25264328)
chr8 (210-323)||(40393754-40393865)
chr8 (209-291)||(10778687-10778768)
chr8 (251-286)||(29869938-29869973)
chr8 (251-315)||(7959856-7959920)
chr8 (209-237)||(33100675-33100703)
chr8 (251-323)||(33390717-33390789)
[»] chr3 (57 HSPs)
chr3 (209-323)||(25446279-25446393)
chr3 (210-353)||(4072262-4072414)
chr3 (184-322)||(22101170-22101307)
chr3 (208-323)||(3970519-3970633)
chr3 (209-323)||(8831770-8831884)
chr3 (209-323)||(10254598-10254712)
chr3 (209-323)||(21969185-21969298)
chr3 (209-323)||(21991621-21991734)
chr3 (184-323)||(22176114-22176252)
chr3 (208-323)||(13078191-13078305)
chr3 (209-345)||(45487829-45487972)
chr3 (210-320)||(55340324-55340434)
chr3 (210-323)||(12789637-12789749)
chr3 (209-320)||(12838107-12838217)
chr3 (209-320)||(32237425-32237535)
chr3 (209-321)||(26906484-26906595)
chr3 (209-321)||(36278786-36278897)
chr3 (209-323)||(10117545-10117654)
chr3 (209-345)||(36822758-36822901)
chr3 (209-323)||(43639109-43639223)
chr3 (209-323)||(25488369-25488482)
chr3 (209-323)||(25561041-25561154)
chr3 (248-320)||(35368801-35368873)
chr3 (209-345)||(36657431-36657574)
chr3 (209-323)||(50099462-50099577)
chr3 (209-323)||(404074-404188)
chr3 (209-319)||(43150510-43150619)
chr3 (209-309)||(45712945-45713044)
chr3 (209-299)||(10017144-10017233)
chr3 (248-323)||(46679329-46679404)
chr3 (210-321)||(42105413-42105523)
chr3 (209-323)||(5529921-5530035)
chr3 (252-313)||(39677312-39677373)
chr3 (220-323)||(44920674-44920776)
chr3 (210-323)||(13724016-13724128)
chr3 (209-283)||(36329248-36329321)
chr3 (257-323)||(26976870-26976936)
chr3 (210-321)||(26977721-26977831)
chr3 (209-320)||(39850375-39850486)
chr3 (209-292)||(10441317-10441399)
chr3 (249-310)||(44611422-44611483)
chr3 (210-314)||(37506164-37506266)
chr3 (250-311)||(157008-157069)
chr3 (209-323)||(1476579-1476692)
chr3 (210-288)||(38125242-38125319)
chr3 (250-309)||(49984001-49984060)
chr3 (250-323)||(297565-297638)
chr3 (255-320)||(46222059-46222124)
chr3 (248-314)||(32363122-32363188)
chr3 (210-288)||(46664207-46664284)
chr3 (298-353)||(22101161-22101217)
chr3 (251-314)||(37536941-37537004)
chr3 (210-240)||(32362892-32362922)
chr3 (253-318)||(51579000-51579065)
chr3 (298-345)||(22176113-22176161)
chr3 (209-237)||(35368579-35368607)
chr3 (209-237)||(36822790-36822818)
[»] chr6 (24 HSPs)
chr6 (180-320)||(13439690-13439836)
chr6 (210-323)||(15546663-15546775)
chr6 (186-323)||(8091063-8091205)
chr6 (209-345)||(885415-885558)
chr6 (209-345)||(21379939-21380082)
chr6 (209-323)||(14393591-14393707)
chr6 (248-323)||(4238922-4238997)
chr6 (183-320)||(4890511-4890654)
chr6 (209-349)||(11687137-11687284)
chr6 (209-323)||(3369015-3369128)
chr6 (209-310)||(18998157-18998258)
chr6 (208-314)||(31764362-31764467)
chr6 (210-323)||(20501737-20501849)
chr6 (209-323)||(29609031-29609144)
chr6 (210-320)||(13172605-13172713)
chr6 (210-323)||(7808640-7808752)
chr6 (254-351)||(17279601-17279703)
chr6 (274-323)||(6433751-6433800)
chr6 (250-314)||(30905046-30905110)
chr6 (250-291)||(17367117-17367158)
chr6 (248-289)||(34522322-34522363)
chr6 (251-323)||(7187633-7187705)
chr6 (209-237)||(7808722-7808750)
chr6 (209-237)||(20501819-20501847)
[»] chr4 (32 HSPs)
chr4 (209-346)||(1298942-1299086)
chr4 (210-349)||(42274486-42274633)
chr4 (209-346)||(18417687-18417831)
chr4 (199-323)||(21048733-21048854)
chr4 (209-323)||(530697-530810)
chr4 (209-323)||(20435168-20435281)
chr4 (248-323)||(24915822-24915897)
chr4 (210-320)||(35360707-35360816)
chr4 (208-321)||(13204406-13204518)
chr4 (210-323)||(4688275-4688388)
chr4 (209-323)||(24969569-24969685)
chr4 (248-323)||(32318748-32318823)
chr4 (209-349)||(55107554-55107701)
chr4 (209-314)||(4552815-4552919)
chr4 (248-344)||(23928567-23928670)
chr4 (209-323)||(27434640-27434753)
chr4 (251-323)||(56552132-56552204)
chr4 (257-349)||(3422423-3422523)
chr4 (252-323)||(9355581-9355652)
chr4 (209-320)||(24294497-24294607)
chr4 (209-297)||(28809901-28809988)
chr4 (248-323)||(2272434-2272509)
chr4 (210-342)||(4895003-4895134)
chr4 (248-323)||(55049428-55049503)
chr4 (249-320)||(16995585-16995656)
chr4 (209-288)||(52824269-52824347)
chr4 (252-320)||(19600971-19601039)
chr4 (278-321)||(43486230-43486273)
chr4 (249-283)||(52587383-52587417)
chr4 (250-283)||(36030998-36031031)
chr4 (251-323)||(47452838-47452910)
chr4 (250-310)||(23481962-23482022)
[»] chr2 (29 HSPs)
chr2 (210-349)||(1923974-1924121)
chr2 (209-344)||(9933569-9933710)
chr2 (209-323)||(3116906-3117019)
chr2 (210-323)||(45408656-45408768)
chr2 (209-320)||(42713808-42713919)
chr2 (209-323)||(24101860-24101973)
chr2 (209-321)||(23835906-23836018)
chr2 (209-321)||(9281377-9281488)
chr2 (209-320)||(2818696-2818806)
chr2 (210-323)||(9850786-9850897)
chr2 (209-323)||(16705763-16705876)
chr2 (209-323)||(27920602-27920715)
chr2 (209-314)||(12850579-12850683)
chr2 (210-347)||(34490487-34490631)
chr2 (209-323)||(7737094-7737208)
chr2 (209-320)||(34455915-34456025)
chr2 (209-323)||(20892914-20893028)
chr2 (248-320)||(43476014-43476086)
chr2 (210-323)||(22269753-22269865)
chr2 (208-320)||(29229394-29229506)
chr2 (208-320)||(29342694-29342806)
chr2 (250-320)||(40362553-40362622)
chr2 (221-323)||(6605777-6605877)
chr2 (208-320)||(7116399-7116510)
chr2 (250-320)||(17500037-17500107)
chr2 (278-320)||(17434728-17434770)
chr2 (323-352)||(3116867-3116896)
chr2 (210-276)||(17434755-17434821)
chr2 (209-237)||(34490569-34490597)
[»] chr1 (49 HSPs)
chr1 (209-323)||(15324656-15324770)
chr1 (210-323)||(47940598-47940711)
chr1 (209-323)||(9978079-9978193)
chr1 (209-345)||(27240922-27241065)
chr1 (209-323)||(5189499-5189612)
chr1 (208-323)||(19954939-19955053)
chr1 (209-323)||(3607757-3607870)
chr1 (183-320)||(957596-957729)
chr1 (210-319)||(14387047-14387155)
chr1 (210-322)||(6079415-6079526)
chr1 (209-321)||(48954244-48954355)
chr1 (209-349)||(50162532-50162680)
chr1 (209-323)||(26208454-26208568)
chr1 (209-323)||(42561323-42561436)
chr1 (210-346)||(4299403-4299535)
chr1 (209-321)||(2854562-2854673)
chr1 (209-321)||(23698532-23698643)
chr1 (210-323)||(27928326-27928438)
chr1 (209-323)||(50627161-50627274)
chr1 (209-323)||(27926279-27926393)
chr1 (209-323)||(2125098-2125211)
chr1 (209-323)||(1387808-1387921)
chr1 (209-323)||(19797009-19797122)
chr1 (209-345)||(40647146-40647291)
chr1 (248-314)||(49284331-49284397)
chr1 (210-320)||(21930411-21930518)
chr1 (209-354)||(51789586-51789736)
chr1 (208-294)||(9895282-9895367)
chr1 (250-323)||(51276723-51276796)
chr1 (253-345)||(36880584-36880684)
chr1 (215-323)||(27670179-27670286)
chr1 (209-323)||(48645042-48645154)
chr1 (248-323)||(50856349-50856424)
chr1 (250-307)||(29598393-29598450)
chr1 (249-309)||(5059604-5059664)
chr1 (209-312)||(22339023-22339125)
chr1 (258-310)||(2302481-2302533)
chr1 (251-311)||(36007860-36007920)
chr1 (248-323)||(35547728-35547803)
chr1 (218-280)||(28243997-28244058)
chr1 (251-319)||(39015225-39015293)
chr1 (250-314)||(42010437-42010501)
chr1 (209-240)||(49285085-49285116)
chr1 (248-298)||(16518353-16518403)
chr1 (251-292)||(25559214-25559255)
chr1 (323-355)||(2854683-2854715)
chr1 (251-291)||(18651310-18651350)
chr1 (278-314)||(28447927-28447963)
chr1 (209-237)||(36880624-36880652)
[»] scaffold0122 (1 HSPs)
scaffold0122 (209-323)||(45864-45977)
[»] chr7 (36 HSPs)
chr7 (209-323)||(30259094-30259207)
chr7 (209-323)||(20184266-20184380)
chr7 (209-323)||(24836050-24836163)
chr7 (209-323)||(30594723-30594836)
chr7 (209-323)||(34052309-34052422)
chr7 (209-323)||(31231642-31231757)
chr7 (209-345)||(39617839-39617983)
chr7 (208-323)||(35339306-35339420)
chr7 (215-320)||(12142228-12142333)
chr7 (208-321)||(3953072-3953184)
chr7 (182-323)||(9285742-9285888)
chr7 (182-323)||(9289809-9289955)
chr7 (215-323)||(45997536-45997643)
chr7 (209-323)||(10936498-10936611)
chr7 (209-323)||(38883251-38883364)
chr7 (210-323)||(40358146-40358258)
chr7 (248-323)||(31521553-31521628)
chr7 (172-321)||(37093755-37093909)
chr7 (250-323)||(39143740-39143813)
chr7 (248-320)||(16876487-16876559)
chr7 (209-320)||(25742466-25742572)
chr7 (208-291)||(24123815-24123899)
chr7 (178-297)||(38528464-38528590)
chr7 (249-314)||(33749713-33749778)
chr7 (210-323)||(48103399-48103508)
chr7 (251-323)||(10398390-10398462)
chr7 (255-310)||(44148722-44148777)
chr7 (208-306)||(29277867-29277963)
chr7 (249-320)||(38989102-38989173)
chr7 (250-323)||(47237460-47237526)
chr7 (251-293)||(1402990-1403032)
chr7 (251-293)||(25572883-25572925)
chr7 (209-239)||(47237539-47237569)
chr7 (257-314)||(21581183-21581240)
chr7 (298-344)||(24123875-24123918)
chr7 (209-237)||(35665663-35665691)
[»] chr5 (32 HSPs)
chr5 (209-323)||(1138589-1138702)
chr5 (184-323)||(21259758-21259902)
chr5 (209-314)||(24397283-24397387)
chr5 (209-323)||(20476461-20476574)
chr5 (209-314)||(21261973-21262077)
chr5 (210-323)||(33629373-33629487)
chr5 (209-323)||(15855873-15855986)
chr5 (209-323)||(16472985-16473098)
chr5 (209-323)||(35420640-35420753)
chr5 (185-311)||(37655192-37655316)
chr5 (210-320)||(4266013-4266122)
chr5 (210-323)||(19976292-19976405)
chr5 (214-323)||(1456050-1456158)
chr5 (185-354)||(37552298-37552473)
chr5 (210-320)||(13754322-13754431)
chr5 (210-320)||(43539138-43539247)
chr5 (210-301)||(12744857-12744947)
chr5 (210-320)||(12807942-12808051)
chr5 (250-321)||(780824-780895)
chr5 (249-320)||(32623246-32623317)
chr5 (252-313)||(8364668-8364729)
chr5 (209-302)||(1164844-1164937)
chr5 (248-320)||(18236536-18236608)
chr5 (209-314)||(35806965-35807069)
chr5 (264-323)||(21591241-21591300)
chr5 (264-323)||(21595358-21595417)
chr5 (249-314)||(35276329-35276394)
chr5 (265-323)||(2529066-2529124)
chr5 (251-291)||(2538467-2538507)
chr5 (267-314)||(28056179-28056226)
chr5 (251-285)||(12257580-12257614)
chr5 (250-282)||(735346-735378)
[»] scaffold0086 (1 HSPs)
scaffold0086 (209-323)||(48156-48269)
[»] scaffold0188 (1 HSPs)
scaffold0188 (210-323)||(7117-7229)
[»] scaffold0653 (1 HSPs)
scaffold0653 (182-323)||(3421-3567)
[»] scaffold0107 (1 HSPs)
scaffold0107 (209-321)||(51093-51204)
[»] scaffold0137 (1 HSPs)
scaffold0137 (214-323)||(10151-10258)
[»] scaffold0163 (1 HSPs)
scaffold0163 (216-323)||(1967-2074)
[»] scaffold0013 (1 HSPs)
scaffold0013 (248-339)||(94240-94333)
[»] scaffold0118 (1 HSPs)
scaffold0118 (210-323)||(14473-14585)
[»] scaffold0595 (2 HSPs)
scaffold0595 (272-323)||(5797-5848)
scaffold0595 (209-240)||(5731-5762)
[»] scaffold0018 (1 HSPs)
scaffold0018 (248-322)||(138306-138380)


Alignment Details
Target: chr8 (Bit Score: 88; Significance: 4e-42; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 40584382 - 40584485
Alignment:
Q  1 tcggtaattgagaaaagttaagtctattattgatgaatgctcgtggaaggagagaaaatgtttatctttctcatatgtaaaataaatattacatagagat 100  Q
    |||||| |||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40584382 tcggtatttgagagaggtcaagtctattattgatgaatgctcgtggaaggagagaaaatgtttatctttctcatatgtaaaataaatattacatagagat 40584481  T
Q  101 gtaa 104  Q
    ||||    
T  40584482 gtaa 40584485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 344 - 435
Target Start/End: Original strand, 40584557 - 40584648
Alignment:
Q  344 tattttaaattccctatttaggtgatttagttctatattgacgatatttttctgtcacgaaaaatttcatcgagccacatgcatgattttat 435  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40584557 tattttaaattccctatttaggtgattcagttctatattgacgatatttttctgtcacgaaaaatttcatcgagccacatgcatgattttat 40584648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 15882230 - 15882344
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||| ||||||||||||||||||||||||||       ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  15882230 ctttttgtatggttcttaactaaaaatacatatttttttggatataactaactttgagaatattatggatttgagaaaatcatggtgaatttagttaaga 15882329  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  15882330 accatacgaaaagca 15882344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 40891044 - 40891156
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||| ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  40891044 ttttcgtacggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 40891142  T
Q  310 ccatatgaaaagca 323  Q
    ||||| ||||||||    
T  40891143 ccatacgaaaagca 40891156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 350
Target Start/End: Original strand, 38629504 - 38629652
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  38629504 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataataaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaaga 38629602  T
Q  309 accatatgaa--------aagcaattgtacctaagttttctcctatttta 350  Q
    |||||| |||        ||| ||||||||||||||||||||||| ||||    
T  38629603 accatacgaaaaacacctaaggaattgtacctaagttttctcctaattta 38629652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 29781100 - 29780987
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||| ||||| |||||| |||| |    
T  29781100 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaattatggtaaatttagttaaaa 29781002  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  29781001 accatacgaaaagca 29780987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 209 - 314
Target Start/End: Original strand, 37114268 - 37114372
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||| ||||||||||||       |||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  37114268 cttttcgtatggttcttaattaaaaatacatatttttt-ggatataataaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaaga 37114366  T
Q  309 accata 314  Q
    ||||||    
T  37114367 accata 37114372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 17426771 - 17426656
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnn-ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 307  Q
    |||||||||||||||||||||||||||  |||        ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  17426771 cttttcgtatggttcttaactaaaaatgtatattttttttggatataacaaactttgagaaaattatagatttgaggaaatcatggtgaatttagttaag 17426672  T
Q  308 aaccatatgaaaagca 323  Q
    ||||||| ||||||||    
T  17426671 aaccatacgaaaagca 17426656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 23940946 - 23940832
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||||| |||||||||||||||||         |||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  23940946 cttttcgtatggtttttaactaaaaatacatatttttttaaatataacaaactttgagaaaattacggatttgaggaaatcatggtgaatttagttaaga 23940847  T
Q  309 accatatgaaaagca 323  Q
    | |||| ||||||||    
T  23940846 atcatacgaaaagca 23940832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 38520048 - 38520161
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||| |    
T  38520048 cttttcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaaaa 38520146  T
Q  309 accatatgaaaagca 323  Q
    | |||| ||||||||    
T  38520147 aacatacgaaaagca 38520161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 12234496 - 12234610
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaa-ctttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 307  Q
    ||||||||||||||||||||||||||||||||       |||||||||||| |||||||||||||||| ||||||| ||||||| ||||||||| ||||     
T  12234496 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaaactttgagaaaattatgaatttgaggaaatcatcgtgaatttagttaat 12234594  T
Q  308 aaccatatgaaaagca 323  Q
    ||||||| ||||||||    
T  12234595 aaccatacgaaaagca 12234610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 250 - 323
Target Start/End: Complemental strand, 4262077 - 4262004
Alignment:
Q  250 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||||||||||||||||||||||||| ||||| ||||||| ||||||||| |||||||||||| ||||||||    
T  4262077 atataacaaactttgagaaaattatggacttgaggaaatcatagtgaatttagttaagaaccatacgaaaagca 4262004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 208 - 314
Target Start/End: Original strand, 38405167 - 38405273
Alignment:
Q  208 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 307  Q
    |||||| |||||||||||||||||||||||||        |||||||||||||||||||||||||| | |||| ||||||||||  |||||||| |||||    
T  38405167 actttttgtatggttcttaactaaaaatacatctttttttggatataacaaactttgagaaaattacgaatttaagaaaatcattatgaatttagttaag 38405266  T
Q  308 aaccata 314  Q
    |||||||    
T  38405267 aaccata 38405273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 24741963 - 24741851
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||||||||||||||||||||||         | |||||| ||||| ||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  24741963 ttttcgtatggttcttaactaaaaatacac-ctatgttgcatataataaactctgagaaaatcatggatttgaggaaatcatggtgaatttagttaagaa 24741865  T
Q  310 ccatatgaaaagca 323  Q
    ||||| ||||||||    
T  24741864 ccatacgaaaagca 24741851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 249 - 320
Target Start/End: Complemental strand, 11828698 - 11828627
Alignment:
Q  249 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 320  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||| |||||||||||| |||||    
T  11828698 gatataacaaactttgagaaaataatggatttgaggaaattatggtgaatttagttaagaaccatacgaaaa 11828627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 209 - 349
Target Start/End: Complemental strand, 24211419 - 24211272
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||| || |||||||||       | |||||||||||| ||||||||||||||| || || |||| | |||||||||||||||||    
T  24211419 cttttcgtatggttcttaaatagaaatacatattttttag-atataacaaactatgagaaaattatggaattaaggaaattacggtgaatttaattaaga 24211321  T
Q  309 accatatgaaaagc--------aattgtacctaagttttctcctatttt 349  Q
    |||||| |||||||        |||||||||||||||||||||| ||||    
T  24211320 accatacgaaaagcacctaaagaattgtacctaagttttctcctttttt 24211272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 314
Target Start/End: Original strand, 8210353 - 8210457
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||| |||||||||||| ||| |||       |||||||||||||||||||||||||||||||||||| |||||||| |||||||  ||||||    
T  8210353 cttttcgtatgattcttaactaaatatatatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttggttaaga 8210451  T
Q  309 accata 314  Q
    | ||||    
T  8210452 atcata 8210457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 33100786 - 33100673
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||| |||||||||||||||| |||||       | |||||||||||||||||||||||||||||||||| |||| | |||   |||| ||||||    
T  33100786 cttttcgtacggttcttaactaaaaaaacatatttttttg-atataacaaactttgagaaaattatggatttgaggaaataacggtatttttagttaaga 33100688  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  33100687 accatacgaaaagca 33100673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 250 - 323
Target Start/End: Complemental strand, 14834770 - 14834700
Alignment:
Q  250 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    ||||||||||||||||   ||||||| |||| |||||||||||||||||||| |||||||||||| ||||||||    
T  14834770 atataacaaactttga---aattatgaatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagca 14834700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 35467243 - 35467313
Alignment:
Q  253 taacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    ||||||||||| |||||||||||||||| |  |||||||| |||||||| |||||||||||| ||||||||    
T  35467243 taacaaactttaagaaaattatggatttaaagaaatcatgatgaatttagttaagaaccatacgaaaagca 35467313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 9775297 - 9775226
Alignment:
Q  254 aacaaactttgagaaaattatggatttgagaaaatcatggtgaatt--taattaagaaccatatgaaaagca 323  Q
    |||||||||||||||||||||| ||||||||||||  |||||||||  ||||||| || |||| ||||||||    
T  9775297 aacaaactttgagaaaattatgaatttgagaaaattttggtgaatttataattaaaaatcatacgaaaagca 9775226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 301
Target Start/End: Complemental strand, 25264328 - 25264277
Alignment:
Q  250 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaattta 301  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||||||||    
T  25264328 atataacaaactttaagaaaattatgaatttgaggaaatcattgtgaattta 25264277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 40393754 - 40393865
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    ||||| |||| ||||||||||||||||||||       |||||||||||| |||||||||||||   ||||||| |||| ||||||||||||  ||||||    
T  40393754 ttttcttatgattcttaactaaaaatacatatttttg-ggatataacaaattttgagaaaattaaa-atttgaggaaattatggtgaatttagctaagaa 40393851  T
Q  310 ccatatgaaaagca 323  Q
    |||||  |||||||    
T  40393852 ccataataaaagca 40393865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 10778687 - 10778768
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcat 291  Q
    |||||||||||||||||||||||||||||||        || |||||||||||||||||| ||| || ||||||| |||||||    
T  10778687 cttttcgtatggttcttaactaaaaatacat-tttttgtggctataacaaactttgagaagattgtgaatttgaggaaatcat 10778768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 286
Target Start/End: Complemental strand, 29869973 - 29869938
Alignment:
Q  251 tataacaaactttgagaaaattatggatttgagaaa 286  Q
    |||||||||||||||||||||| |||||||||||||    
T  29869973 tataacaaactttgagaaaattgtggatttgagaaa 29869938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 7959920 - 7959856
Alignment:
Q  251 tataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatat 315  Q
    ||||||||||||||||| || ||| ||||| || ||||||| |  |||||| |||||||||||||    
T  7959920 tataacaaactttgagacaactatagattttaggaaatcatagcaaatttagttaagaaccatat 7959856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 237
Target Start/End: Original strand, 33100675 - 33100703
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatac 237  Q
    |||||||||||||||||||||||||||||    
T  33100675 cttttcgtatggttcttaactaaaaatac 33100703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 33390717 - 33390789
Alignment:
Q  251 tataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||| ||||||||||||||| || ||||||| ||||| ||   ||||||  ||| ||||||||||||||||    
T  33390717 tataacgaactttgagaaaattgtgaatttgaggaaatcgtgagtaatttagctaaaaaccatatgaaaagca 33390789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 25446279 - 25446393
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  25446279 cttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaga 25446378  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  25446379 accatacgaaaagca 25446393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 210 - 353
Target Start/End: Complemental strand, 4072414 - 4072262
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  4072414 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaagaa 4072315  T
Q  310 ccatatgaaaagc--------aattgtacctaagttttctcct-attttaaat 353  Q
    ||||| |||||||        |||||||||||||||||||||| |||||||||    
T  4072314 ccatacgaaaagcacctaagaaattgtacctaagttttctcctaattttaaat 4072262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 184 - 322
Target Start/End: Original strand, 22101170 - 22101307
Alignment:
Q  184 aggagaaaatttagatacaattccacttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgag 283  Q
    ||||||||| ||||  |||||||  ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||    
T  22101170 aggagaaaacttaggaacaattcg-cttttcgtatggttcttaactaaaaatacatattttgttggatataacaaactttgagaaaattatggatttgag 22101268  T
Q  284 aaaatcatggtgaatttaattaagaaccatatgaaaagc 322  Q
     ||||||| ||||||||| |||||||||||| |||||||    
T  22101269 gaaatcatagtgaatttagttaagaaccatacgaaaagc 22101307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 208 - 323
Target Start/End: Complemental strand, 3970633 - 3970519
Alignment:
Q  208 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 307  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||    
T  3970633 acttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaag 3970535  T
Q  308 aaccatatgaaaagca 323  Q
    ||||||| ||||||||    
T  3970534 aaccatacgaaaagca 3970519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 8831770 - 8831884
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||||||| |||||||||||||||       |||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  8831770 cttttcgtatggttctaaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaagaaatcatggtgaatttagttaaga 8831869  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  8831870 accatacgaaaagca 8831884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 10254598 - 10254712
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||| |||||||||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  10254598 cttttcatatggttcttaactaaaaatacatatttttttggatataacaaactttgaaaaaattatggatttgagaaaatcatgatgaatttagttaaga 10254697  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  10254698 accatacgaaaagca 10254712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 21969298 - 21969185
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||    
T  21969298 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaaga 21969200  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  21969199 accatacgaaaagca 21969185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 21991734 - 21991621
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||    
T  21991734 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaaga 21991636  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  21991635 accatacgaaaagca 21991621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 184 - 323
Target Start/End: Original strand, 22176114 - 22176252
Alignment:
Q  184 aggagaaaatttagatacaattccacttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgag 283  Q
    ||||||||| ||||  |||||||  ||||||||||||||||||||||||||||||||       |||||| |||||||||||||||||||||||||||||    
T  22176114 aggagaaaacttaggaacaattcg-cttttcgtatggttcttaactaaaaatacatattttgttggatattacaaactttgagaaaattatggatttgag 22176212  T
Q  284 aaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
     ||||||| ||||||||| ||||||||||||  |||||||    
T  22176213 gaaatcatagtgaatttagttaagaaccatacaaaaagca 22176252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 323
Target Start/End: Complemental strand, 13078305 - 13078191
Alignment:
Q  208 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 307  Q
    |||||||||||| ||||||||||||||||||||       ||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||    
T  13078305 acttttcgtatgattcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaag 13078207  T
Q  308 aaccatatgaaaagca 323  Q
    ||||||| ||||||||    
T  13078206 aaccatacgaaaagca 13078191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 45487829 - 45487972
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  45487829 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaacattgagaaaattatgaatttgaggaaatcatggtgaatttagttaaga 45487927  T
Q  309 accatatgaaaagc--------aattgtacctaagttttctccta 345  Q
    |||||| |||||||        |||||||||||||||||||||||    
T  45487928 accatacgaaaagcacctaaggaattgtacctaagttttctccta 45487972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 210 - 320
Target Start/End: Complemental strand, 55340434 - 55340324
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    ||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  55340434 ttttcatatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatatagttaagaa 55340335  T
Q  310 ccatatgaaaa 320  Q
     |||| |||||    
T  55340334 tcatacgaaaa 55340324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 12789637 - 12789749
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  12789637 ttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgaaaaaattatgaatttgaggaaatcatggtgaatttaattaagaa 12789735  T
Q  310 ccatatgaaaagca 323  Q
    |||||  |||||||    
T  12789736 ccatacaaaaagca 12789749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 209 - 320
Target Start/End: Original strand, 12838107 - 12838217
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |    
T  12838107 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaaa 12838205  T
Q  309 accatatgaaaa 320  Q
    |||||| |||||    
T  12838206 accatacgaaaa 12838217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 209 - 320
Target Start/End: Complemental strand, 32237535 - 32237425
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  32237535 cttttcgtatggttcttaattaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatctgagaaaatcatggtaaatttagttaaga 32237437  T
Q  309 accatatgaaaa 320  Q
    |||||| |||||    
T  32237436 accatacgaaaa 32237425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 321
Target Start/End: Original strand, 26906484 - 26906595
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  26906484 cttttcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaaga 26906582  T
Q  309 accatatgaaaag 321  Q
    |||||| ||||||    
T  26906583 accatacgaaaag 26906595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 321
Target Start/End: Complemental strand, 36278897 - 36278786
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  36278897 cttttcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaaga 36278799  T
Q  309 accatatgaaaag 321  Q
    |||||| ||||||    
T  36278798 accatacgaaaag 36278786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 10117545 - 10117654
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||     |||||||| ||||||    
T  10117545 cttttcatatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgagaaaat-----tgaatttagttaaga 10117639  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  10117640 accatacgaaaagca 10117654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 209 - 345
Target Start/End: Complemental strand, 36822901 - 36822758
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||| ||||||||||   |||| ||||||    
T  36822901 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatctgaggaaatcatggtatttttagttaaga 36822803  T
Q  309 accatatgaaaagc--------aattgtacctaagttttctccta 345  Q
    |||||| |||||||        |||||||||||||||||||||||    
T  36822802 accatacgaaaagcagctaaggaattgtacctaagttttctccta 36822758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 43639223 - 43639109
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||| |||||||||||||||| |||       |||||||||||||||||||||||||||||||||||  ||||||||||||||||  ||||||    
T  43639223 cttttcgtatgattcttaactaaaaatatatatttttttggatataacaaactttgagaaaattatggatttgaagaaatcatggtgaatttggttaaga 43639124  T
Q  309 accatatgaaaagca 323  Q
    | |||| ||||||||    
T  43639123 atcatacgaaaagca 43639109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 25488482 - 25488369
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||| ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||    
T  25488482 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatatgaagaaatcatggtgaatttagttaaga 25488384  T
Q  309 accatatgaaaagca 323  Q
    || ||| ||||||||    
T  25488383 actatacgaaaagca 25488369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 25561041 - 25561154
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||| ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||    
T  25561041 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatatgaagaaatcatggtgaatttagttaaga 25561139  T
Q  309 accatatgaaaagca 323  Q
    || ||| ||||||||    
T  25561140 actatacgaaaagca 25561154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 248 - 320
Target Start/End: Original strand, 35368801 - 35368873
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||    
T  35368801 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaaaaccatacgaaaa 35368873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 209 - 345
Target Start/End: Complemental strand, 36657574 - 36657431
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||| |||||||| |   |||| ||||||    
T  36657574 cttttcgtatggttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaaga 36657476  T
Q  309 accatatgaaaagc--------aattgtacctaagttttctccta 345  Q
    |||||| |||||||        |||||||||||||||||||||||    
T  36657475 accatacgaaaagcatctaaggaattgtacctaagttttctccta 36657431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 50099462 - 50099577
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnn-ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 307  Q
    |||||||||||||| |||| ||||||||||||        |||||||||||||||||||||||||||| ||||||| |||| |||||||||||| |||||    
T  50099462 cttttcgtatggtttttaattaaaaatacatattttttttggatataacaaactttgagaaaattatgaatttgaggaaattatggtgaatttagttaag 50099561  T
Q  308 aaccatatgaaaagca 323  Q
    ||||||| ||||||||    
T  50099562 aaccatacgaaaagca 50099577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 404074 - 404188
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||| || ||||||||||||| |||       ||||||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||||    
T  404074 cttttcgtatgatttttaactaaaaataaatatttttttggatataacaaactttgagaaaattatagacttgaggaaatcatggtgaatttagttaaga 404173  T
Q  309 accatatgaaaagca 323  Q
    |||||| | ||||||    
T  404174 accatacggaaagca 404188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 43150510 - 43150619
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  43150510 cttttcgtatggtttttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaaga 43150608  T
Q  309 accatatgaaa 319  Q
    | |||| ||||    
T  43150609 atcatacgaaa 43150619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 45713044 - 45712945
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||||||| |||||||||||||||       |||||||||||||||||| |||||||||| |||||| ||||||||||||||||| ||||||    
T  45713044 cttttcgtatggttctaaactaaaaatacatatttttt-ggatataacaaactttgataaaattatggctttgaggaaatcatggtgaatttagttaaga 45712946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 209 - 299
Target Start/End: Original strand, 10017144 - 10017233
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatt 299  Q
    |||||| |||||||||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  10017144 cttttcatatggttcttaactaaaaatacatatttttt-ggatataacaaactttgaaaaaattatggatttgagaaaatcatgatgaatt 10017233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 323
Target Start/End: Original strand, 46679329 - 46679404
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||| ||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||| ||| |||||||    
T  46679329 ggatttaacaaactttgagaaaattatggatttgaggaaattatggtgaatttagttaagaaccgtataaaaagca 46679404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 210 - 321
Target Start/End: Complemental strand, 42105523 - 42105413
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||| |||||||||||||||||||||||| |        || |||||||||||||||| |||||||||||| ||||||||| |||||||||| |||||||    
T  42105523 tttttgtatggttcttaactaaaaataca-atttttttagagataacaaactttgagagaattatggatttaagaaaatcacggtgaatttagttaagaa 42105425  T
Q  310 ccatatgaaaag 321  Q
    ||||| ||||||    
T  42105424 ccataagaaaag 42105413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 5529921 - 5530035
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       ||||||| ||||||||||||||||||| ||||| |  ||||||||||   |||| |||| |    
T  5529921 cttttcgtatggttcttaactaaaaatacatatttttttggatatatcaaactttgagaaaattatagatttaaagaaatcatggtatttttagttaata 5530020  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  5530021 accatacgaaaagca 5530035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 39677373 - 39677312
Alignment:
Q  252 ataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccat 313  Q
    |||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||    
T  39677373 ataacaaactttgaaaaaattatgaatttgagaaaatcatagtgaatttaattaagaaccat 39677312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 220 - 323
Target Start/End: Complemental strand, 44920776 - 44920674
Alignment:
Q  220 gttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaa 319  Q
    |||||||||||||||||||||       |||||||| ||||||||||||||||||  ||||||||||||||| || |||||| |||||||||||| ||||    
T  44920776 gttcttaactaaaaatacatatttttt-ggatataataaactttgagaaaattataaatttgagaaaatcattgtaaatttagttaagaaccataagaaa 44920678  T
Q  320 agca 323  Q
    ||||    
T  44920677 agca 44920674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 13724128 - 13724016
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||  || |||||||||||||||||       |||||||||||||||||||||||||||| ||||||  |||||||||||||||| | ||||||    
T  13724128 ttttcgtataatttttaactaaaaatacatatttttttggatataacaaactttgagaaaattatgaatttgaagaaatcatggtgaattt-agtaagaa 13724030  T
Q  310 ccatatgaaaagca 323  Q
    |||||  |||||||    
T  13724029 ccatacaaaaagca 13724016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 209 - 283
Target Start/End: Complemental strand, 36329321 - 36329248
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgag 283  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||    
T  36329321 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgag 36329248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 26976936 - 26976870
Alignment:
Q  257 aaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||| ||||||||    
T  26976936 aaactttgagaaaattatggatttgagaaaatcatactaaatttaattaagaactatacgaaaagca 26976870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 26977721 - 26977831
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    ||||||||||||| ||||||||||||||||        | ||| || ||||||||||||||||||||||||||| |||||||  | |||||| |||||||    
T  26977721 ttttcgtatggtttttaactaaaaatacatctttttatg-atacaataaactttgagaaaattatggatttgaggaaatcatactaaatttagttaagaa 26977819  T
Q  310 ccatatgaaaag 321  Q
    ||||||||||||    
T  26977820 ccatatgaaaag 26977831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 320
Target Start/End: Complemental strand, 39850486 - 39850375
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactt-tgagaaaattatggatttgagaaaatcatggtgaatttaattaag 307  Q
    ||||||||||| |||||||||||||||| |||       ||||||||||||||| ||||||||||||||||||||| ||||||||||   |||| |||||    
T  39850486 cttttcgtatgattcttaactaaaaatatatatttttt-ggatataacaaacttgtgagaaaattatggatttgaggaaatcatggtatttttagttaag 39850388  T
Q  308 aaccatatgaaaa 320  Q
    ||||||| |||||    
T  39850387 aaccatacgaaaa 39850375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 10441399 - 10441317
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatg 292  Q
    ||||| ||| ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||    
T  10441399 cttttggtacggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatg 10441317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 249 - 310
Target Start/End: Complemental strand, 44611483 - 44611422
Alignment:
Q  249 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaac 310  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||    
T  44611483 gatataacaaactttgagaaaattatgaatttgaagaaatcatggtgaatttagttaagaac 44611422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 37506266 - 37506164
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    ||||||| ||||||||||||||||||||||        ||| |||||||||||||||||||||||| |||| |||||||||| || |||||| |||||||    
T  37506266 ttttcgtgtggttcttaactaaaaatacat-tttttttggagataacaaactttgagaaaattatgaatttaagaaaatcat-gtaaatttagttaagaa 37506169  T
Q  310 ccata 314  Q
    |||||    
T  37506168 ccata 37506164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 157069 - 157008
Alignment:
Q  250 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaacc 311  Q
    |||||||||||||||||||||||||||||||||| |||| ||| | |||||| |||||||||    
T  157069 atataacaaactttgagaaaattatggatttgaggaaattatgataaatttagttaagaacc 157008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 1476692 - 1476579
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||| ||||||||||||||||||||||| |        || |||||||||||||||| |||||||||||| || |||||||||||||||||  | |||    
T  1476692 cttttcatatggttcttaactaaaaataca-atttttttagagataacaaactttgagagaattatggatttaaggaaatcatggtgaatttaggttaga 1476594  T
Q  309 accatatgaaaagca 323  Q
    ||||||  |||||||    
T  1476593 accataccaaaagca 1476579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 288
Target Start/End: Complemental strand, 38125319 - 38125242
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaat 288  Q
    |||||||||||||||||||||||||||||||       | |||||||||||||| |||||||||||||||| |||||||    
T  38125319 ttttcgtatggttcttaactaaaaatacatatttttt-gtatataacaaactttaagaaaattatggatttaagaaaat 38125242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 309
Target Start/End: Original strand, 49984001 - 49984060
Alignment:
Q  250 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||| ||| ||||| |||||||||||||| |||||||||||||||||||| |||||||    
T  49984001 atataataaattttgaaaaaattatggatttaagaaaatcatggtgaatttagttaagaa 49984060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 323
Target Start/End: Complemental strand, 297638 - 297565
Alignment:
Q  250 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||||||||| |||||||||||||||||| |||||||  | || ||||||  ||||||||||| ||||||||    
T  297638 atataacaaactatgagaaaattatggatttcagaaaattgtagtaaatttagctaagaaccatacgaaaagca 297565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 46222124 - 46222059
Alignment:
Q  255 acaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 320  Q
    |||||||  |||||||||||| |||| |||||||||||||||||||| |||| ||||||| |||||    
T  46222124 acaaactaagagaaaattatgaatttaagaaaatcatggtgaatttagttaaaaaccatacgaaaa 46222059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 314
Target Start/End: Original strand, 32363122 - 32363188
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 314  Q
    |||||||||||| ||| | |||||||||||||||||||||| || || |||||| |||| |||||||    
T  32363122 ggatataacaaatttttaaaaaattatggatttgagaaaattattgtaaatttagttaataaccata 32363188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 288
Target Start/End: Original strand, 46664207 - 46664284
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaat 288  Q
    ||||||||| |||||||||||||||||||||         |||||||||||||||||||||||||| ||||||| ||||    
T  46664207 ttttcgtatagttcttaactaaaaatacatattttttta-atataacaaactttgagaaaattatgaatttgaggaaat 46664284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 353
Target Start/End: Complemental strand, 22101217 - 22101161
Alignment:
Q  298 tttaattaagaaccatatgaaaagc-aattgtacctaagttttctcctattttaaat 353  Q
    |||| |||||||||||| ||||||| |||||| ||||||||||||||||| ||||||    
T  22101217 tttagttaagaaccatacgaaaagcgaattgttcctaagttttctcctatattaaat 22101161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 37536941 - 37537004
Alignment:
Q  251 tataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 314  Q
    ||||||||||||||||||||||||||||| ||| |||| ||    |||||| ||||||||||||    
T  37536941 tataacaaactttgagaaaattatggattagaggaaattataaataatttagttaagaaccata 37537004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 32362892 - 32362922
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacata 240  Q
    |||||||||||||||||||||||||||||||    
T  32362892 ttttcgtatggttcttaactaaaaatacata 32362922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 51579065 - 51579000
Alignment:
Q  253 taacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaa 318  Q
    ||||||||||  | |||||||||||||||||||||| |||   | |||| ||||||||||||||||    
T  51579065 taacaaacttcaaaaaaattatggatttgagaaaattatgtatagtttagttaagaaccatatgaa 51579000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 22176161 - 22176113
Alignment:
Q  298 tttaattaagaaccatatgaaaagc-aattgtacctaagttttctccta 345  Q
    |||| |||||||||||| ||||||| |||||| ||||||||||||||||    
T  22176161 tttagttaagaaccatacgaaaagcgaattgttcctaagttttctccta 22176113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 237
Target Start/End: Original strand, 35368579 - 35368607
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatac 237  Q
    |||||||||||||||||||||||||||||    
T  35368579 cttttcgtatggttcttaactaaaaatac 35368607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 237
Target Start/End: Original strand, 36822790 - 36822818
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatac 237  Q
    |||||||||||||||||||||||||||||    
T  36822790 cttttcgtatggttcttaactaaaaatac 36822818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 9e-37; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 180 - 320
Target Start/End: Original strand, 13439690 - 13439836
Alignment:
Q  180 ttaaaggagaaaatttagatacaattcc------acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaatta 273  Q
    ||||||||||||| |||| |||||||||      ||||||||||||||||||| |||||||||||||       ||||||||||||||||||||||||||    
T  13439690 ttaaaggagaaaacttaggtacaattccttaagtacttttcgtatggttcttagctaaaaatacatatttttttggatataacaaactttgagaaaatta 13439789  T
Q  274 tggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 320  Q
    |||||||||| ||||||||||||||||| |||||||||||| |||||    
T  13439790 tggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 13439836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 15546663 - 15546775
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  15546663 tttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaatttaattaagaa 15546761  T
Q  310 ccatatgaaaagca 323  Q
    ||||| ||||||||    
T  15546762 ccatacgaaaagca 15546775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 186 - 323
Target Start/End: Original strand, 8091063 - 8091205
Alignment:
Q  186 gagaaaatttagatacaattcca------cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatt 279  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  8091063 gagaaaatttagatacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatt 8091161  T
Q  280 tgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    | || |||||| |||||||||| |||||||||||| ||||||||    
T  8091162 taaggaaatcacggtgaatttagttaagaaccatacgaaaagca 8091205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 885415 - 885558
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||| ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  885415 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgagaaaatcatgatgaatttagttaaga 885513  T
Q  309 accatatgaaaagc--------aattgtacctaagttttctccta 345  Q
    | |||| |||||||        |||||||||||||||||||||||    
T  885514 atcataggaaaagcacctaaggaattgtacctaagttttctccta 885558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 209 - 345
Target Start/End: Complemental strand, 21380082 - 21379939
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  21380082 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaacattgagaaaattatgaatttgaggaaatcatggtgaatttagttaaga 21379984  T
Q  309 accatatgaaaagc--------aattgtacctaagttttctccta 345  Q
    |||||| |||||||        |||||||||||||||||||||||    
T  21379983 accatacgaaaagcacctaaggaattgtacctaagttttctccta 21379939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 14393591 - 14393707
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnn--ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaa 306  Q
    ||||||||||| ||||||||||||||||||||         |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  14393591 cttttcgtatgattcttaactaaaaatacatatttctttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaa 14393690  T
Q  307 gaaccatatgaaaagca 323  Q
    ||||||||  |||||||    
T  14393691 gaaccatacaaaaagca 14393707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 248 - 323
Target Start/End: Original strand, 4238922 - 4238997
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  4238922 ggatataacaaactttgagaaaattaaggatttgagaaaatcatggtgaatttaattaagaaccatacaaaaagca 4238997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 183 - 320
Target Start/End: Complemental strand, 4890654 - 4890511
Alignment:
Q  183 aaggagaaaatttagatacaattcca------cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatgg 276  Q
    ||||||||||||||| |||||||||       ||||||||||||||||||||||||||  ||||       ||||||||||||||||||||||||||||     
T  4890654 aaggagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaacgcatatttttttggatataacaaactttgagaaaattatga 4890555  T
Q  277 atttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 320  Q
    ||||||| |||||||||| |||||| |||||||||||| |||||    
T  4890554 atttgaggaaatcatggtaaatttagttaagaaccatacgaaaa 4890511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 349
Target Start/End: Complemental strand, 11687284 - 11687137
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||| |||||||| |   |||| ||||||    
T  11687284 cttttcgtatggttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaaga 11687186  T
Q  309 accatatgaaaagc--------aattgtacctaagttttctcctatttt 349  Q
    |||||| |||||||        |||||||||||||||||||||||||||    
T  11687185 accatacgaaaagcatctaaggaattgtacctaagttttctcctatttt 11687137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 3369015 - 3369128
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||    
T  3369015 cttttcgtatggttcttaactaaaaatacatatttttt-gaatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttagga 3369113  T
Q  309 accatatgaaaagca 323  Q
    || ||| ||||||||    
T  3369114 acgatacgaaaagca 3369128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 18998258 - 18998157
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||| ||||||||||||        ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||    
T  18998258 cttttcgtatggttcttaattaaaaatacatattttttttgatataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaaga 18998159  T
Q  309 ac 310  Q
    ||    
T  18998158 ac 18998157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 208 - 314
Target Start/End: Complemental strand, 31764467 - 31764362
Alignment:
Q  208 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 307  Q
    ||||||||||| ||||||||||||| |||||||       ||||| |||||||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  31764467 acttttcgtatagttcttaactaaagatacatatttttt-ggatacaacaaactttgagaaaattatgaatttgagaaaataatggtgaatttagttaag 31764369  T
Q  308 aaccata 314  Q
    |||||||    
T  31764368 aaccata 31764362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 20501737 - 20501849
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||||  ||||||||||   |||| |||||||    
T  20501737 ttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaacttcgagaaaattatggatttgaagaaatcatggtatttttagttaagaa 20501835  T
Q  310 ccatatgaaaagca 323  Q
    ||||| ||||||||    
T  20501836 ccatacgaaaagca 20501849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 29609031 - 29609144
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||| ||||||||||||||||||||||        ||| ||||||||||||||||||||||||||||| || |||||| |||||||||| |||| |    
T  29609031 cttttcgtgtggttcttaactaaaaatacat-cttttttggagataacaaactttgagaaaattatggatttaaggaaatcacggtgaatttagttaaaa 29609129  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  29609130 accatacgaaaagca 29609144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 210 - 320
Target Start/End: Complemental strand, 13172713 - 13172605
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||||||||||| ||||||||||||       |||||||||||||||||||||||||||||||||||| |||| ||  |||||||| |||||||    
T  13172713 ttttcgtatggttcttaagtaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatgat-atgaatttagttaagaa 13172616  T
Q  310 ccatatgaaaa 320  Q
    ||||| |||||    
T  13172615 ccatacgaaaa 13172605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 7808640 - 7808752
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    ||||||| ||||| |||||||||||||||||       ||||||||||||||||||||||||||| |||||||| ||||||||||   |||| |||||||    
T  7808640 ttttcgtttggtttttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatagatttgaggaaatcatggtatttttagttaagaa 7808738  T
Q  310 ccatatgaaaagca 323  Q
    ||||| ||||||||    
T  7808739 ccatacgaaaagca 7808752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 351
Target Start/End: Original strand, 17279601 - 17279703
Alignment:
Q  254 aacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaa-----aagcaattgtacctaagttttctcctattt 348  Q
    |||||||||||| ||||||||| ||||||  |||||||| |||||||| |||||||| ||| |||     ||| |||||||||||||||||||||||| |    
T  17279601 aacaaactttgataaaattatgaatttgaagaaatcatgatgaatttagttaagaactatacgaacacctaagaaattgtacctaagttttctcctatat 17279700  T
Q  349 taa 351  Q
    |||    
T  17279701 taa 17279703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 323
Target Start/End: Original strand, 6433751 - 6433800
Alignment:
Q  274 tggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||||||| ||||||| ||||||||| |||||||||||| ||||||||    
T  6433751 tggatttgaggaaatcatagtgaatttagttaagaaccatacgaaaagca 6433800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 30905046 - 30905110
Alignment:
Q  250 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 314  Q
    |||||| |||||||||||||||||| |||||||| | |||| | |||||||| |||| |||||||    
T  30905046 atataaaaaactttgagaaaattatagatttgagtagatcacgatgaatttagttaaaaaccata 30905110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 17367158 - 17367117
Alignment:
Q  250 atataacaaactttgagaaaattatggatttgagaaaatcat 291  Q
    |||||||||||||||||||||||||| ||||||  |||||||    
T  17367158 atataacaaactttgagaaaattatgaatttgatgaaatcat 17367117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 34522363 - 34522322
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatc 289  Q
    |||||||||||||||| ||||||||||| |||| ||||||||    
T  34522363 ggatataacaaactttaagaaaattatgaatttaagaaaatc 34522322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 7187633 - 7187705
Alignment:
Q  251 tataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    ||||| |||||||||||||| |||| ||||||| ||||||||||  ||||| |||| ||| |||  |||||||    
T  7187633 tataataaactttgagaaaaatatgaatttgagtaaatcatggtttatttagttaataactatacaaaaagca 7187705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 237
Target Start/End: Complemental strand, 7808750 - 7808722
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatac 237  Q
    |||||||||||||||||||||||||||||    
T  7808750 cttttcgtatggttcttaactaaaaatac 7808722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 237
Target Start/End: Complemental strand, 20501847 - 20501819
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatac 237  Q
    |||||||||||||||||||||||||||||    
T  20501847 cttttcgtatggttcttaactaaaaatac 20501819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 9e-37; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 209 - 346
Target Start/End: Original strand, 1298942 - 1299086
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1298942 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaga 1299040  T
Q  309 accatatgaaaagc--------aattgtacctaagttttctcctat 346  Q
    |||||| |||||||        ||||||||||||||||||||||||    
T  1299041 accataagaaaagcacctaaggaattgtacctaagttttctcctat 1299086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 210 - 349
Target Start/End: Complemental strand, 42274633 - 42274486
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    ||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  42274633 ttttcgtatggttcttaactaaaaatatatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 42274534  T
Q  310 ccatatgaaaagc--------aattgtacctaagttttctcctatttt 349  Q
    ||||| |||||||        |||||||||||||||||||||| ||||    
T  42274533 ccatacgaaaagcatctaaggaattgtacctaagttttctcctttttt 42274486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 209 - 346
Target Start/End: Original strand, 18417687 - 18417831
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18417687 cttttcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttaattaaga 18417785  T
Q  309 accatatgaaaagc--------aattgtacctaagttttctcctat 346  Q
    ||||||  ||||||        ||||||||||||||||||||||||    
T  18417786 accatacaaaaagcacctaaggaattgtacctaagttttctcctat 18417831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 199 - 323
Target Start/End: Complemental strand, 21048854 - 21048733
Alignment:
Q  199 tacaattccacttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaat 298  Q
    ||||||||| ||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  21048854 tacaattcc-cttttcgtatggttcttaactaaaaatacatatttttt--gatataacaaacttcgagaaaattatggatttgaggaaatcatggtgaat 21048758  T
Q  299 ttaattaagaaccatatgaaaagca 323  Q
    ||| |||||||||||| ||||||||    
T  21048757 ttagttaagaaccatacgaaaagca 21048733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 530810 - 530697
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||    
T  530810 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatgatggtgaatttagttaaga 530712  T
Q  309 accatatgaaaagca 323  Q
    ||||||  |||||||    
T  530711 accatacaaaaagca 530697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 20435281 - 20435168
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||||    
T  20435281 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaacttcgagaaaattatggatttgaggaaatcatgatgaatttagttaaga 20435183  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  20435182 accatacgaaaagca 20435168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 248 - 323
Target Start/End: Complemental strand, 24915897 - 24915822
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  24915897 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccatacgaaaagca 24915822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 210 - 320
Target Start/End: Original strand, 35360707 - 35360816
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||    
T  35360707 ttttcgtatggttcttaactaaaaatacatattttttag-atataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaa 35360805  T
Q  310 ccatatgaaaa 320  Q
    ||||| |||||    
T  35360806 ccatacgaaaa 35360816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 208 - 321
Target Start/End: Original strand, 13204406 - 13204518
Alignment:
Q  208 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 307  Q
    |||||| ||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||     
T  13204406 actttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgtgaaaattatggatttgaggaaatcatggtgaatttagttaaa 13204504  T
Q  308 aaccatatgaaaag 321  Q
    ||||||| ||||||    
T  13204505 aaccatacgaaaag 13204518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 4688388 - 4688275
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||| || ||||||| ||||||  ||||||||| |||||||    
T  4688388 ttttcgtatggttcttaattaaaaatacatatttttttggatataacaaactttgagaaaattgtgaatttgaggaaatcacagtgaatttagttaagaa 4688289  T
Q  310 ccatatgaaaagca 323  Q
    ||||| ||||||||    
T  4688288 ccatacgaaaagca 4688275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 24969685 - 24969569
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnn--ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaa 306  Q
    |||||||||| ||||||||||||||||||||          |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  24969685 cttttcgtatagttcttaactaaaaatacatttttttttttggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaa 24969586  T
Q  307 gaaccatatgaaaagca 323  Q
    |||||||| ||||||||    
T  24969585 gaaccatacgaaaagca 24969569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 323
Target Start/End: Complemental strand, 32318823 - 32318748
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||| ||||||||    
T  32318823 ggatataacaaactttgagaaaattatggatctgaggaaatcatggtgaatttagttaagaaccatacgaaaagca 32318748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 209 - 349
Target Start/End: Original strand, 55107554 - 55107701
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||||| ||||||| |||||||||| |||||| | ||||    
T  55107554 cttttcatatggttcttaactaaaaatacatattattt-ggatataacaaactttgagaaaattatgcatttgaggaaatcatggtaaatttagtaaaga 55107652  T
Q  309 accatatgaaaagc--------aattgtacctaagttttctcctatttt 349  Q
    ||||||  ||||||        |||||||||||||||||||||| ||||    
T  55107653 accatacaaaaagcacctaaggaattgtacctaagttttctcctttttt 55107701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 209 - 314
Target Start/End: Original strand, 4552815 - 4552919
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||| ||||||| ||||||||||||| |||       |||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  4552815 cttttcatatggtttttaactaaaaataaatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttagttaaga 4552913  T
Q  309 accata 314  Q
    ||||||    
T  4552914 accata 4552919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 248 - 344
Target Start/End: Complemental strand, 23928670 - 23928567
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaa-------aagcaattgtacctaagttttc 340  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||| |||       ||| ||||||||||||||||||    
T  23928670 ggatataacaaattttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaatcatacgaaaaacactaaggaattgtacctaagttttc 23928571  T
Q  341 tcct 344  Q
    ||||    
T  23928570 tcct 23928567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 27434640 - 27434753
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||| |||| ||||||||||||||||||||        |||||||||||||||||||||||||||| ||||||| |||| ||||| |||||| ||||||    
T  27434640 ctttttgtatagttcttaactaaaaatacat-tttttttggatataacaaactttgagaaaattatgaatttgaggaaattatggtaaatttagttaaga 27434738  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  27434739 accatacgaaaagca 27434753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 56552132 - 56552204
Alignment:
Q  251 tataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| || |||||    
T  56552132 tataacaaactttgagaaaattatggatttgaggaaatcatggttaatttatttaagaaccatacgataagca 56552204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 3422523 - 3422423
Alignment:
Q  257 aaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagc--------aattgtacctaagttttctcctattt 348  Q
    |||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||| |||||||        ||||||||||||||||||||||||||    
T  3422523 aaactttgagaaaattatggatttgagaaaatcatactaaatttaattaagaactatacgaaaagcacctaagaaattgtacctaagttttctcctattt 3422424  T
Q  349 t 349  Q
    |    
T  3422423 t 3422423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 252 - 323
Target Start/End: Complemental strand, 9355652 - 9355581
Alignment:
Q  252 ataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||||| | |||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||    
T  9355652 ataacaaattctgagaaaattatggatttaaggaaatcatggtgaatttagttaagaaccatatgaaaagca 9355581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 209 - 320
Target Start/End: Original strand, 24294497 - 24294607
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||| ||||||| ||||||||||||       | |||||||||||||||||||||||| | ||||||| |||| |||||||||||| ||||||    
T  24294497 cttttcgtatgattcttaattaaaaatacatatttttttg-atataacaaactttgagaaaattacgaatttgaggaaattatggtgaatttagttaaga 24294595  T
Q  309 accatatgaaaa 320  Q
    |||||| |||||    
T  24294596 accatacgaaaa 24294607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 209 - 297
Target Start/End: Complemental strand, 28809988 - 28809901
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaa 297  Q
    ||||| |||||||||||||||| |||||||||       |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28809988 cttttggtatggttcttaactagaaatacatatttttt-ggatataacaaattttgagaaaattatggatttgagaaaatcatggtgaa 28809901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 248 - 323
Target Start/End: Original strand, 2272434 - 2272509
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    ||||| |||||||||||| |||||||||||||| || |||||||||||||||||  ||||||||||| ||||||||    
T  2272434 ggatagaacaaactttgataaaattatggatttaaggaaatcatggtgaatttagctaagaaccatacgaaaagca 2272509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 342
Target Start/End: Original strand, 4895003 - 4895134
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag-a 308  Q
    |||| |||| |||||||||||||||||||||       | |||||||||||||||||||||||||| ||||||| |||||||||| |||||| ||||| |    
T  4895003 tttttgtatagttcttaactaaaaatacatatttttt-gaatataacaaactttgagaaaattatgaatttgaggaaatcatggtaaatttagttaagaa 4895101  T
Q  309 accatatgaaaagcaattgtacctaagttttctc 342  Q
    |||||| ||||| | | ||||| |||||||||||    
T  4895102 accatacgaaaatc-actgtacataagttttctc 4895134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 248 - 323
Target Start/End: Complemental strand, 55049503 - 55049428
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||||||||||||||| |||||||||| |||||| ||||||| ||||||||| |||||||| ||| ||||||||    
T  55049503 ggatataacaaactttgaaaaaattatgggtttgaggaaatcatagtgaatttagttaagaactatacgaaaagca 55049428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 249 - 320
Target Start/End: Complemental strand, 16995656 - 16995585
Alignment:
Q  249 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 320  Q
    ||||||||||||| ||| ||||| |||| ||||||||||||||| ||||||||||||| ||||||| |||||    
T  16995656 gatataacaaactctgaaaaaatgatgggtttgagaaaatcatgttgaatttaattaaaaaccatacgaaaa 16995585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 209 - 288
Target Start/End: Original strand, 52824269 - 52824347
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaat 288  Q
    ||||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||| ||||    
T  52824269 cttttcgtatggttcttaactaaaaatacatatttttta-gatataataaactttgagaaaattatggatttgaggaaat 52824347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 19601039 - 19600971
Alignment:
Q  252 ataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 320  Q
    |||||||||||||| || ||||||||||| | |||||||||| |||||||||||| |||||||| ||||    
T  19601039 ataacaaactttgaaaatattatggatttaacaaaatcatggcgaatttaattaaaaaccatataaaaa 19600971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 43486273 - 43486230
Alignment:
Q  278 tttgagaaaatcatggtgaatttaattaagaaccatatgaaaag 321  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  43486273 tttgagaaaatcatggtgaatttagttaagaaccataggaaaag 43486230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 52587417 - 52587383
Alignment:
Q  249 gatataacaaactttgagaaaattatggatttgag 283  Q
    |||||||||||||||||||||||||||||||||||    
T  52587417 gatataacaaactttgagaaaattatggatttgag 52587383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 36031031 - 36030998
Alignment:
Q  250 atataacaaactttgagaaaattatggatttgag 283  Q
    ||||||||||||||||||||||||||||||||||    
T  36031031 atataacaaactttgagaaaattatggatttgag 36030998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 47452910 - 47452838
Alignment:
Q  251 tataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||||||||| | ||||||| |||||||||| ||| |||||  | || | |||||||||||||||||||||    
T  47452910 tataacaaacttcgggaaaattgtggatttgaggaaaacatgggtagttaagttaagaaccatatgaaaagca 47452838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 23482022 - 23481962
Alignment:
Q  250 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaac 310  Q
    |||||||||| |||||||||||||| ||||| | || |||||  | |||||||||||||||    
T  23482022 atataacaaattttgagaaaattatagatttaaaaacatcataataaatttaattaagaac 23481962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 4e-36; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 210 - 349
Target Start/End: Complemental strand, 1924121 - 1923974
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  1924121 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaagaa 1924022  T
Q  310 ccatatgaaaagc--------aattgtacctaagttttctcctatttt 349  Q
    ||||| |||||||        |||||||||||||||||||||| ||||    
T  1924021 ccatacgaaaagcacctaagaaattgtacctaagttttctcctttttt 1923974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 209 - 344
Target Start/End: Complemental strand, 9933710 - 9933569
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       | |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9933710 cttttcgtatggttcttaactaaaaatacatattttttag-atataataaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaga 9933612  T
Q  309 accatatgaaaagc-------aattgtacctaagttttctcct 344  Q
    |||||| |||||||       ||||||||||||||||||||||    
T  9933611 accataggaaaagcactaatgaattgtacctaagttttctcct 9933569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 3116906 - 3117019
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  3116906 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgagaaaatcataatgaatttagttaaga 3117004  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  3117005 accatacgaaaagca 3117019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 45408656 - 45408768
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  45408656 tttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaatttaattaagaa 45408754  T
Q  310 ccatatgaaaagca 323  Q
    ||||| ||||||||    
T  45408755 ccatacgaaaagca 45408768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 209 - 320
Target Start/End: Complemental strand, 42713919 - 42713808
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||| ||| ||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42713919 cttttcgcatgattcttaactaaaaatacatatttttttggatataataaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaga 42713820  T
Q  309 accatatgaaaa 320  Q
    |||||| |||||    
T  42713819 accatacgaaaa 42713808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 24101973 - 24101860
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||  ||||| ||||||    
T  24101973 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtatatttagttaaga 24101875  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  24101874 accatacgaaaagca 24101860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 209 - 321
Target Start/End: Original strand, 23835906 - 23836018
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||||||| |||||  |||| |    
T  23835906 cttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaattttgttaaaa 23836005  T
Q  309 accatatgaaaag 321  Q
    |||||| ||||||    
T  23836006 accatacgaaaag 23836018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 321
Target Start/End: Complemental strand, 9281488 - 9281377
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  9281488 cttttcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaaga 9281390  T
Q  309 accatatgaaaag 321  Q
    |||||||||||||    
T  9281389 accatatgaaaag 9281377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 209 - 320
Target Start/End: Original strand, 2818696 - 2818806
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||| ||||||||||||||||||||       ||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  2818696 cttttcgtatgattcttaactaaaaatacatatttttt-ggatatatcaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaga 2818794  T
Q  309 accatatgaaaa 320  Q
    |||||| |||||    
T  2818795 accatacgaaaa 2818806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 9850897 - 9850786
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||||||||||||||||||||||||        ||||||||||| |||||||||||||||||||| ||||||||||||| |||||| |||||||    
T  9850897 ttttcgtatggttcttaactaaaaatacatatttttt--gatataacaaattttgagaaaattatggatttaagaaaatcatggtaaatttagttaagaa 9850800  T
Q  310 ccatatgaaaagca 323  Q
    ||||| ||||||||    
T  9850799 ccatacgaaaagca 9850786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 16705763 - 16705876
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||| |||||||||| |||||||||||||| ||||||||| |||| |    
T  16705763 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgataaaattatggctttgagaaaatcatagtgaatttagttaaaa 16705861  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  16705862 accatacgaaaagca 16705876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 27920602 - 27920715
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||| |||||||||||| ||||||       |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  27920602 cttttcgtatgggtcttaactaaaactacatatttttt-ggatataacaaactttgaaaaaattatggatttgaggaaatcatggtgaatttagttaaga 27920700  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  27920701 accatacgaaaagca 27920715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 209 - 314
Target Start/End: Complemental strand, 12850683 - 12850579
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||| |    
T  12850683 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaatttagttaaaa 12850585  T
Q  309 accata 314  Q
    ||||||    
T  12850584 accata 12850579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 210 - 347
Target Start/End: Original strand, 34490487 - 34490631
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||| ||||||||||   |||| |||||||    
T  34490487 ttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatctgaggaaatcatggtatttttagttaagaa 34490585  T
Q  310 ccatatgaaaagc--------aattgtacctaagttttctcctatt 347  Q
    ||||| |||||||        |||||||||||||||||||||||||    
T  34490586 ccatacgaaaagcacctaaggaattgtacctaagttttctcctatt 34490631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 7737094 - 7737208
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||| ||||| ||||||||||||||||||||       ||||||||||||||||||||||||||||| |||||| |||||||||| |||||| ||||||    
T  7737094 cttttggtatgattcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggctttgaggaaatcatggtaaatttagttaaga 7737193  T
Q  309 accatatgaaaagca 323  Q
    | |||| ||||||||    
T  7737194 atcatacgaaaagca 7737208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 209 - 320
Target Start/End: Original strand, 34455915 - 34456025
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||| |||||||| |||| ||| |||||||||||| ||    
T  34455915 cttttcgtatggttcttaattaaaaatacatatttttt-ggatataacaaactttgagaaaattatagatttgaggaaattatgatgaatttaattagga 34456013  T
Q  309 accatatgaaaa 320  Q
    |||||| |||||    
T  34456014 accatacgaaaa 34456025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 20892914 - 20893028
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||  |||| || ||   |||| ||||||    
T  20892914 cttttcgtatggttcttaactaaaaatacatatttttatggatataacaaactttgagaaaattatggatttgatgaaattattgtatttttagttaaga 20893013  T
Q  309 accatatgaaaagca 323  Q
    | |||| ||||||||    
T  20893014 atcatacgaaaagca 20893028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 248 - 320
Target Start/End: Original strand, 43476014 - 43476086
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 320  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||| |||||    
T  43476014 ggatataataaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 43476086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 22269753 - 22269865
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||| || |||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||||| |   |||| |||||||    
T  22269753 ttttcgtatgatttttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatgttttttttagttaagaa 22269851  T
Q  310 ccatatgaaaagca 323  Q
    ||||| ||||||||    
T  22269852 ccatacgaaaagca 22269865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 320
Target Start/End: Complemental strand, 29229506 - 29229394
Alignment:
Q  208 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaacttt-gagaaaattatggatttgagaaaatcatggtgaatttaattaa 306  Q
    |||||||||||||||||||||||||||||||||       |||||||| ||||||| |||||||||||||||||||| |||||||| ||||| || ||||    
T  29229506 acttttcgtatggttcttaactaaaaatacatatttttt-ggatataataaacttttgagaaaattatggatttgaggaaatcatgatgaatatagttaa 29229408  T
Q  307 gaaccatatgaaaa 320  Q
    ||| |||| |||||    
T  29229407 gaatcatacgaaaa 29229394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 320
Target Start/End: Complemental strand, 29342806 - 29342694
Alignment:
Q  208 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaacttt-gagaaaattatggatttgagaaaatcatggtgaatttaattaa 306  Q
    |||||||||||||||||||||||||||||||||       |||||||| ||||||| |||||||||||||||||||| |||||||| ||||| || ||||    
T  29342806 acttttcgtatggttcttaactaaaaatacatatttttt-ggatataataaacttttgagaaaattatggatttgaggaaatcatgatgaatatagttaa 29342708  T
Q  307 gaaccatatgaaaa 320  Q
    ||| |||| |||||    
T  29342707 gaatcatacgaaaa 29342694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 320
Target Start/End: Original strand, 40362553 - 40362622
Alignment:
Q  250 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||    
T  40362553 atataacaaactatgagaaaattatg-atttgagaaaatcatggtgaatttagttaagaaccatacgaaaa 40362622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 221 - 323
Target Start/End: Original strand, 6605777 - 6605877
Alignment:
Q  221 ttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 320  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||| ||||||| |||||||||| ||||| | |||||||||||  ||||    
T  6605777 ttcttaactaaaaatacatattattt-ggatataacaaactttgagaaaattatgcatttgaggaaatcatggtaaattt-agtaagaaccatacaaaaa 6605874  T
Q  321 gca 323  Q
    |||    
T  6605875 gca 6605877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 208 - 320
Target Start/End: Original strand, 7116399 - 7116510
Alignment:
Q  208 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 307  Q
    ||||||||||||||||| |||||||||||||         ||||| ||||| |||||||||||||||||||||||  |||| ||||| |||||| |||||    
T  7116399 acttttcgtatggttctcaactaaaaatacac-ctttgttggatagaacaatctttgagaaaattatggatttgatgaaattatggtaaatttatttaag 7116497  T
Q  308 aaccatatgaaaa 320  Q
    ||||||| |||||    
T  7116498 aaccatacgaaaa 7116510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 320
Target Start/End: Complemental strand, 17500107 - 17500037
Alignment:
Q  250 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 320  Q
    |||||||||||||||| ||||| | ||||||||||| || |  ||||||||| |||||||||||| |||||    
T  17500107 atataacaaactttgaaaaaataaaggatttgagaagattaccgtgaatttagttaagaaccatacgaaaa 17500037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 17434770 - 17434728
Alignment:
Q  278 tttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 320  Q
    ||||||||||| |||||||||||| |||||||||||| |||||    
T  17434770 tttgagaaaattatggtgaatttagttaagaaccatacgaaaa 17434728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 352
Target Start/End: Complemental strand, 3116896 - 3116867
Alignment:
Q  323 aattgtacctaagttttctcctattttaaa 352  Q
    ||||||||||||||||||||||||||||||    
T  3116896 aattgtacctaagttttctcctattttaaa 3116867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 17434821 - 17434755
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatgg 276  Q
    |||||||||| |||||||||||| | | |||       |||||||||||||||||||||||||||||    
T  17434821 ttttcgtatgattcttaactaaataaatatatttttttggatataacaaactttgagaaaattatgg 17434755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 237
Target Start/End: Complemental strand, 34490597 - 34490569
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatac 237  Q
    |||||||||||||||||||||||||||||    
T  34490597 cttttcgtatggttcttaactaaaaatac 34490569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 4e-36; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 15324656 - 15324770
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  15324656 cttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaaga 15324755  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  15324756 accatacgaaaagca 15324770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 47940711 - 47940598
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  47940711 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaagaa 47940612  T
Q  310 ccatatgaaaagca 323  Q
    ||||| ||||||||    
T  47940611 ccatacgaaaagca 47940598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 9978193 - 9978079
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  9978193 cttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaaga 9978094  T
Q  309 accatatgaaaagca 323  Q
    | |||| ||||||||    
T  9978093 atcatacgaaaagca 9978079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 209 - 345
Target Start/End: Complemental strand, 27241065 - 27240922
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||| ||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27241065 ctttgcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaga 27240967  T
Q  309 accatatgaaaagc--------aattgtacctaagttttctccta 345  Q
    |||||| |||||||        |||||||||||||||||||||||    
T  27240966 accatacgaaaagcacctaaggaattgtacctaagttttctccta 27240922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 5189499 - 5189612
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||    
T  5189499 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaaga 5189597  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  5189598 accatacgaaaagca 5189612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 323
Target Start/End: Complemental strand, 19955053 - 19954939
Alignment:
Q  208 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 307  Q
    |||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  19955053 actttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaag 19954955  T
Q  308 aaccatatgaaaagca 323  Q
    ||| ||| ||||||||    
T  19954954 aactatacgaaaagca 19954939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 3607870 - 3607757
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  3607870 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttagttaaga 3607772  T
Q  309 accatatgaaaagca 323  Q
    ||||||  |||||||    
T  3607771 accatacaaaaagca 3607757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 183 - 320
Target Start/End: Original strand, 957596 - 957729
Alignment:
Q  183 aaggagaaaatttagatacaattccacttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttga 282  Q
    ||||||||||||||| |||||     ||||||||||| ||||||||||||| ||||||        ||||||||||||||||||||||||||||||||||    
T  957596 aaggagaaaatttaggtacaag----cttttcgtatgattcttaactaaaattacatattttttttgatataacaaactttgagaaaattatggatttga 957691  T
Q  283 gaaaatcatggtgaatttaattaagaaccatatgaaaa 320  Q
    ||||||||||||||||||| ||||||| |||| |||||    
T  957692 gaaaatcatggtgaatttagttaagaatcatacgaaaa 957729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 210 - 319
Target Start/End: Complemental strand, 14387155 - 14387047
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  14387155 ttttcgtatggttcttaactaaaaatacatatttttt-ggatataataaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 14387057  T
Q  310 ccatatgaaa 319  Q
    ||||| ||||    
T  14387056 ccatacgaaa 14387047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 6079415 - 6079526
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||| ||||||| ||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  6079415 ttttcgtacggttcttcactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 6079513  T
Q  310 ccatatgaaaagc 322  Q
    ||||| |||||||    
T  6079514 ccatacgaaaagc 6079526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 321
Target Start/End: Complemental strand, 48954355 - 48954244
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  48954355 cttttcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaaga 48954257  T
Q  309 accatatgaaaag 321  Q
    |||||||||||||    
T  48954256 accatatgaaaag 48954244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 349
Target Start/End: Complemental strand, 50162680 - 50162532
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||| ||||||||||||||||||| ||||||       ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |    
T  50162680 ctttttgtatggttcttaactaaaattacatatttttttggatataacaaactttgagaaaattatagatttgagaaaatcacggtgaatttaattaaaa 50162581  T
Q  309 accatatgaa--------aagcaattgtacctaagttttctcctatttt 349  Q
    ||||||  ||        ||| |||||||||||||||||||||||||||    
T  50162580 accatacaaaaaatacctaaggaattgtacctaagttttctcctatttt 50162532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 26208454 - 26208568
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||||||| |||||||||||||||       |||||||||||||||||||||||||||||||||||  |||| |||||||||||| || |||    
T  26208454 cttttcgtatggttctcaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaagaaattatggtgaatttagttcaga 26208553  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  26208554 accatacgaaaagca 26208568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 42561436 - 42561323
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||| ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||    
T  42561436 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatatgaagaaatcatggtgaatttagttaaga 42561338  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  42561337 accatacgaaaagca 42561323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 210 - 346
Target Start/End: Complemental strand, 4299535 - 4299403
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnn--ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 307  Q
    |||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||    
T  4299535 ttttcgtatggttcttaactaaaaatacatatttttttttggatataacaaactttgagaaaattatggatttgaggaaataatggtgaatttagttaag 4299436  T
Q  308 aaccatatgaaaagcaattgtacctaagttttctcctat 346  Q
    | ||||| |||||      ||||||||||||||||||||    
T  4299435 agccatacgaaaa------gtacctaagttttctcctat 4299403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 321
Target Start/End: Complemental strand, 2854673 - 2854562
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  2854673 cttttcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaaga 2854575  T
Q  309 accatatgaaaag 321  Q
    |||||| ||||||    
T  2854574 accatacgaaaag 2854562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 321
Target Start/End: Complemental strand, 23698643 - 23698532
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  23698643 cttttcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaaga 23698545  T
Q  309 accatatgaaaag 321  Q
    |||||| ||||||    
T  23698544 accatacgaaaag 23698532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 27928438 - 27928326
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| ||||| ||||||  ||||||||| |||||||    
T  27928438 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatgga-ttgaggaaatcacagtgaatttagttaagaa 27928340  T
Q  310 ccatatgaaaagca 323  Q
    |||||  |||||||    
T  27928339 ccatacaaaaagca 27928326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 50627161 - 50627274
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||||| |   |||| ||||||    
T  50627161 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaaga 50627259  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  50627260 accatacgaaaagca 50627274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 27926393 - 27926279
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnn-ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 307  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||| ||||||  ||||||||| |||||    
T  27926393 cttttcgtatggttcttaactaaaaatacatattttttttggatataacaaactttgagaaaattatgga-ttgaggaaatcacagtgaatttagttaag 27926295  T
Q  308 aaccatatgaaaagca 323  Q
    ||||||| ||||||||    
T  27926294 aaccatacgaaaagca 27926279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 2125211 - 2125098
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||| |||||||||||||||||||||       | |||||||||||||||||||||||||  |||| | |||||||||||||||||| ||||||    
T  2125211 cttttcgtatagttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattataaatttaaaaaaatcatggtgaatttagttaaga 2125113  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  2125112 accatacgaaaagca 2125098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 1387808 - 1387921
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||| ||||||| ||||||||||   |||| ||||||    
T  1387808 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataataaactttgagaaaattatgaatttgaggaaatcatggtatctttagttaaga 1387906  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  1387907 accatacgaaaagca 1387921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 19797122 - 19797009
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||||||||||||| ||||||||||   |||| |||| |    
T  19797122 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgaaaaaattatggatttgaggaaatcatggtatttttagttaaaa 19797024  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  19797023 accatacgaaaagca 19797009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 40647146 - 40647291
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnngg-atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 307  Q
    |||||||| |||||||||||||||||||||||          |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||     
T  40647146 cttttcgtgtggttcttaactaaaaatacatattttttttttatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaa 40647245  T
Q  308 aaccatatgaaaagc--------aattgtacctaagttttctccta 345  Q
    || |||| |||||||        |||||||||||||||||||||||    
T  40647246 aatcatacgaaaagcacctaaggaattgtacctaagttttctccta 40647291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 314
Target Start/End: Complemental strand, 49284397 - 49284331
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 314  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||    
T  49284397 ggatataacaaactttgaaaaaattatggatttaagaaaatcatggtgaatttagttaagaaccata 49284331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 210 - 320
Target Start/End: Original strand, 21930411 - 21930518
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||||   |||   |||||||||||| |||||||    
T  21930411 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttaagaaaattatggattt---aaagaaatggtgaatttagttaagaa 21930507  T
Q  310 ccatatgaaaa 320  Q
    ||||| |||||    
T  21930508 ccatacgaaaa 21930518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 354
Target Start/End: Complemental strand, 51789736 - 51789586
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||||||||||||||||| ||||         ||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||| |    
T  51789736 cttttcgtatggttcttaactaaaaacacatttttta---gatataacatactttgagaaaattatggaattgaggaaatcatggtgaatttagttaaaa 51789640  T
Q  309 accatatgaa--------aagcaattgtacctaagttttctcctattttaaatt 354  Q
    |||||| |||        ||| |||||||||||||||||||||| ||| |||||    
T  51789639 accatacgaaaatcacctaaggaattgtacctaagttttctcctttttaaaatt 51789586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 9895282 - 9895367
Alignment:
Q  208 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggt 294  Q
    |||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||| ||||||| ||||||||||    
T  9895282 acttttcgtatggttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattatgtatttgaggaaatcatggt 9895367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 323
Target Start/End: Complemental strand, 51276796 - 51276723
Alignment:
Q  250 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||| ||||||||||||||||||||||||||| |||||||  |||||||| |||||||||||| ||||||||    
T  51276796 atataataaactttgagaaaattatggatttgaggaaatcataatgaatttagttaagaaccatacgaaaagca 51276723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 36880584 - 36880684
Alignment:
Q  253 taacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagc--------aattgtacctaagttttctcct 344  Q
    ||||||||||||||||||||||||||||||| ||||||||||   |||| |||||||||||| |||||||        ||||||||||||||||||||||    
T  36880584 taacaaactttgagaaaattatggatttgaggaaatcatggtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcct 36880683  T
Q  345 a 345  Q
    |    
T  36880684 a 36880684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 323
Target Start/End: Original strand, 27670179 - 27670286
Alignment:
Q  215 gtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 314  Q
    ||||| ||||||||||||||||||||       | |||||| |||||||||||||||||||||||| || |||||||| |||||||| |||| |||||||    
T  27670179 gtatgattcttaactaaaaatacatatttttt-gaatataaaaaactttgagaaaattatggatttaaggaaatcatgatgaatttagttaaaaaccata 27670277  T
Q  315 tgaaaagca 323  Q
     ||||||||    
T  27670278 cgaaaagca 27670286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 48645154 - 48645042
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||| ||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||| |||||||| |   |||| ||||||    
T  48645154 cttttcgta-ggttcttaactaaaaatacatattttttag-atataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaaga 48645057  T
Q  309 accatatgaaaagca 323  Q
    | |||| ||||||||    
T  48645056 agcatacgaaaagca 48645042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 248 - 323
Target Start/End: Complemental strand, 50856424 - 50856349
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||||||||| ||||||||||||||||| ||||| |||| ||||||||||||  |||||| |||| ||||||||    
T  50856424 ggatataacaaattttgagaaaattatggacttgaggaaataatggtgaatttagctaagaatcatacgaaaagca 50856349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 29598393 - 29598450
Alignment:
Q  250 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 307  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||||||||| |||||    
T  29598393 atataacaaactttgagaaaattatggatttaaggaaatcatagtgaatttagttaag 29598450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 309
Target Start/End: Complemental strand, 5059664 - 5059604
Alignment:
Q  249 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    ||||||||||||||||| |||||||||||||| | ||||| ||||| ||||||||||||||    
T  5059664 gatataacaaactttgataaaattatggatttaaaaaaattatggtaaatttaattaagaa 5059604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 209 - 312
Target Start/End: Complemental strand, 22339125 - 22339023
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||| |||||||||||||||||||||||         ||||| |||| ||||||||||||| ||||||||||  |||||||||||| |||| ||||||    
T  22339125 cttttcatatggttcttaactaaaaatacac-ctttgttggatagaacagactttgagaaaatgatggatttgatgaaatcatggtgagtttagttaaga 22339027  T
Q  309 acca 312  Q
    ||||    
T  22339026 acca 22339023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 2302481 - 2302533
Alignment:
Q  258 aactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaac 310  Q
    |||||||||||||||||| ||||||| ||||||||||||||||  ||||||||    
T  2302481 aactttgagaaaattatgaatttgaggaaatcatggtgaattttgttaagaac 2302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 36007920 - 36007860
Alignment:
Q  251 tataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaacc 311  Q
    ||||||||||||||||||||||||| ||||||| |||||||||  | |||| |||||||||    
T  36007920 tataacaaactttgagaaaattatgtatttgaggaaatcatggatagtttagttaagaacc 36007860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 323
Target Start/End: Complemental strand, 35547803 - 35547728
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    ||||||| |||||||  |||||||||||||||| |  |||| ||||||| |||| ||||||||||||| |||||||    
T  35547803 ggatatatcaaacttatagaaaattatggatttaaagaaattatggtgattttagttaagaaccatataaaaagca 35547728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 280
Target Start/End: Original strand, 28243997 - 28244058
Alignment:
Q  218 tggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggattt 280  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  28243997 tggttcttaactaaaaatacat-cttttttggatataacaaactttgagaaaattatggattt 28244058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 319
Target Start/End: Complemental strand, 39015293 - 39015225
Alignment:
Q  251 tataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaa 319  Q
    |||||| |||||||||||||||||||||||||  |||||||||| | || | | |||||||||| ||||    
T  39015293 tataacgaactttgagaaaattatggatttgaagaaatcatggttagttaattaaagaaccatacgaaa 39015225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 314
Target Start/End: Complemental strand, 42010501 - 42010437
Alignment:
Q  250 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 314  Q
    ||||||||||||||   |||||||||  ||| ||||||||||||| ||||||||||| |||||||    
T  42010501 atataacaaactttcgaaaaattatgattttaagaaaatcatggtaaatttaattaaaaaccata 42010437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Complemental strand, 49285116 - 49285085
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacata 240  Q
    ||||||||||||||||||||||||||||||||    
T  49285116 cttttcgtatggttcttaactaaaaatacata 49285085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 16518403 - 16518353
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaat 298  Q
    ||||| |||||||| ||||||||||||| | |||||||||| |||||||||    
T  16518403 ggatacaacaaactatgagaaaattatgtaattgagaaaattatggtgaat 16518353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 25559255 - 25559214
Alignment:
Q  251 tataacaaactttgagaaaattatggatttgagaaaatcatg 292  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||    
T  25559255 tataacaaactctgaaaaaattatgtatttgagaaaatcatg 25559214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 355
Target Start/End: Original strand, 2854683 - 2854715
Alignment:
Q  323 aattgtacctaagttttctcctattttaaattc 355  Q
    |||||||||||||||||||||||| ||||||||    
T  2854683 aattgtacctaagttttctcctatattaaattc 2854715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 18651350 - 18651310
Alignment:
Q  251 tataacaaactttgagaaaattatggatttgagaaaatcat 291  Q
    ||||||||| ||||||||||||||||||||| | |||||||    
T  18651350 tataacaaattttgagaaaattatggatttggggaaatcat 18651310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 28447963 - 28447927
Alignment:
Q  278 tttgagaaaatcatggtgaatttaattaagaaccata 314  Q
    |||||||||||||| || |||||||||||||||||||    
T  28447963 tttgagaaaatcatagtaaatttaattaagaaccata 28447927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 237
Target Start/End: Complemental strand, 36880652 - 36880624
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatac 237  Q
    |||||||||||||||||||||||||||||    
T  36880652 cttttcgtatggttcttaactaaaaatac 36880624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 45864 - 45977
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  45864 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaga 45962  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  45963 accataagaaaagca 45977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 30259207 - 30259094
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30259207 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaga 30259109  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  30259108 accataggaaaagca 30259094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 20184380 - 20184266
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||| ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  20184380 cttttcgtatgattcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaga 20184281  T
Q  309 accatatgaaaagca 323  Q
    | |||| ||||||||    
T  20184280 atcatacgaaaagca 20184266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 24836050 - 24836163
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||||||| |||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  24836050 cttttcgtatggttctnaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaga 24836148  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  24836149 accatacgaaaagca 24836163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 30594723 - 30594836
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||| || |||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  30594723 cttttcgcatagttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaga 30594821  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  30594822 accatacgaaaagca 30594836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 34052309 - 34052422
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||| ||||||| |||||||||||||||||  |||||    
T  34052309 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagctaaga 34052407  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  34052408 accatacgaaaagca 34052422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 31231757 - 31231642
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnngg-atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 307  Q
    ||||||||||||||||||||||||||||||||       |  |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  31231757 cttttcgtatggttcttaactaaaaatacatattttttggacatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaag 31231658  T
Q  308 aaccatatgaaaagca 323  Q
    |||||||  |||||||    
T  31231657 aaccatacaaaaagca 31231642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 345
Target Start/End: Complemental strand, 39617983 - 39617839
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||| ||||||||||||||||| |||       |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||    
T  39617983 cttttcgtatagttcttaactaaaaataaatatttttttggatataacaaactttgagaaaattatggattggaggaaatcatggtgaatttagttaaga 39617884  T
Q  309 accatatgaa--------aagcaattgtacctaagttttctccta 345  Q
    |||||| |||        ||| |||||||||||||||||||||||    
T  39617883 accatacgaagaacatctaagaaattgtacctaagttttctccta 39617839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 208 - 323
Target Start/End: Complemental strand, 35339420 - 35339306
Alignment:
Q  208 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 307  Q
    |||||||||||||||||||| ||||||||||||       |||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||    
T  35339420 acttttcgtatggttcttaaataaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaagaaatcatgatgaatttagttaag 35339322  T
Q  308 aaccatatgaaaagca 323  Q
    ||||||| ||||||||    
T  35339321 aaccatacgaaaagca 35339306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 215 - 320
Target Start/End: Original strand, 12142228 - 12142333
Alignment:
Q  215 gtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 314  Q
    |||||||||||||||||||||| |||       ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  12142228 gtatggttcttaactaaaaatatatatatttttggatataacaatctttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaactata 12142327  T
Q  315 tgaaaa 320  Q
     |||||    
T  12142328 cgaaaa 12142333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 208 - 321
Target Start/End: Complemental strand, 3953184 - 3953072
Alignment:
Q  208 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 307  Q
    |||||| ||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||     
T  3953184 actttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgtgaaaattatggatttgaggaaatcatggtgaatttagttaaa 3953086  T
Q  308 aaccatatgaaaag 321  Q
    ||||||| ||||||    
T  3953085 aaccatacgaaaag 3953072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 182 - 323
Target Start/End: Complemental strand, 9285888 - 9285742
Alignment:
Q  182 aaaggagaaaatttagatacaattcc------acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatg 275  Q
    |||||||||||||||| ||||||||       |||||||||||||||||||| ||||||||||||       |||||||||||||||||| ||||||||     
T  9285888 aaaggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaaaatacatatttttt-ggatataacaaactttgataaaattata 9285790  T
Q  276 gatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
     ||||||| ||||||||||||||||||||||||||||||  |||||||    
T  9285789 aatttgaggaaatcatggtgaatttaattaagaaccatacaaaaagca 9285742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 182 - 323
Target Start/End: Complemental strand, 9289955 - 9289809
Alignment:
Q  182 aaaggagaaaatttagatacaattcc------acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatg 275  Q
    |||||||||||||||| ||||||||       |||||||||||||||||||| ||||||||||||       |||||||||||||||||| ||||||||     
T  9289955 aaaggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaaaatacatatttttt-ggatataacaaactttgataaaattata 9289857  T
Q  276 gatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
     ||||||| ||||||||||||||||||||||||||||||  |||||||    
T  9289856 aatttgaggaaatcatggtgaatttaattaagaaccatacaaaaagca 9289809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 215 - 323
Target Start/End: Complemental strand, 45997643 - 45997536
Alignment:
Q  215 gtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 314  Q
    ||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  45997643 gtatggttcttaactaaaaatacatatttttt-ggatataataaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccata 45997545  T
Q  315 tgaaaagca 323  Q
      |||||||    
T  45997544 caaaaagca 45997536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 10936611 - 10936498
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       || |||||||||||||||||||||||| |||||||| || |||||||||||||| ||||||    
T  10936611 cttttcgtatggttcttaactaaaaatacatatttttt-ggttataacaaactttgagaaaattatagatttgaggaagtcatggtgaatttagttaaga 10936513  T
Q  309 accatatgaaaagca 323  Q
    ||| || ||||||||    
T  10936512 accgtacgaaaagca 10936498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 38883251 - 38883364
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||||| |   |||| ||||||    
T  38883251 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaaga 38883349  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  38883350 accatacgaaaagca 38883364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 40358146 - 40358258
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||||||||||||||||||| ||||       | |||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||    
T  40358146 ttttcgtatggttcttaactaaaaatgcatatttttttg-atataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaa 40358244  T
Q  310 ccatatgaaaagca 323  Q
     |||| ||||||||    
T  40358245 tcataggaaaagca 40358258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 323
Target Start/End: Complemental strand, 31521628 - 31521553
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||||| ||||||||| ||||||||| |||||||||||||||||| |||||| |||||||||||| ||||||||    
T  31521628 ggatataataaactttgaaaaaattatgaatttgagaaaatcatggtaaatttagttaagaaccatacgaaaagca 31521553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 172 - 321
Target Start/End: Original strand, 37093755 - 37093909
Alignment:
Q  172 tttatattttaaaggagaaaatttagatacaattcc------acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttga 265  Q
    ||||| || ||||||||||||||||| ||||||| |      | |||||||||| ||||||| |||||||| |||       ||||||||||||||||||    
T  37093755 tttattttctaaaggagaaaatttaggtacaatttcttaggtatttttcgtatgattcttaattaaaaatatatatttttt-ggatataacaaactttga 37093853  T
Q  266 gaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaag 321  Q
    |||||||||  ||||||| ||||||||||||||||| |||| ||||||| ||||||    
T  37093854 gaaaattataaatttgaggaaatcatggtgaatttagttaaaaaccatacgaaaag 37093909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 323
Target Start/End: Complemental strand, 39143813 - 39143740
Alignment:
Q  250 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||||||| | |||||||||| ||||||||    
T  39143813 atataacaaactttgagaatattatggatttgaggaaattatggtgaatttagtcaagaaccatacgaaaagca 39143740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 16876559 - 16876487
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 320  Q
    |||||||||||||| | ||||||||| |||||||||||||||||||| ||||||| ||||||||||| |||||    
T  16876559 ggatataacaaactctaagaaaattacggatttgagaaaatcatggtaaatttaagtaagaaccatacgaaaa 16876487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 209 - 320
Target Start/End: Complemental strand, 25742572 - 25742466
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||     |||||||| ||||||    
T  25742572 cttttcgtatggttgttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaat----atgaatttagttaaga 25742478  T
Q  309 accatatgaaaa 320  Q
    |||||| |||||    
T  25742477 accataggaaaa 25742466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 208 - 291
Target Start/End: Complemental strand, 24123899 - 24123815
Alignment:
Q  208 acttttcgtatggttcttaactaaaaatacatannnnnnn-ggatataacaaactttgagaaaattatggatttgagaaaatcat 291  Q
    |||||||||||||||||||| ||||||||||||        |||||||||||||||||||||||||||||||||||| |||||||    
T  24123899 acttttcgtatggttcttaattaaaaatacatattttttttggatataacaaactttgagaaaattatggatttgaggaaatcat 24123815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 178 - 297
Target Start/End: Complemental strand, 38528590 - 38528464
Alignment:
Q  178 ttttaaaggagaaaatttagatacaattcca------cttttcgtatggttcttaactaaaaatacatannnnnnngg-atataacaaactttgagaaaa 270  Q
    ||||||||||||||| |||| |||||||||       ||||||||||||||||||||||||||||||||          |||||||||||||||||||||    
T  38528590 ttttaaaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatattttttttttatataacaaactttgagaaaa 38528491  T
Q  271 ttatggatttgagaaaatcatggtgaa 297  Q
    ||||||||| ||| || ||||||||||    
T  38528490 ttatggattcgaggaattcatggtgaa 38528464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 314
Target Start/End: Original strand, 33749713 - 33749778
Alignment:
Q  249 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 314  Q
    ||||||| ||||||||||||||||||| |||| || |||||||| |||||||| ||||||||||||    
T  33749713 gatataataaactttgagaaaattatgaatttaaggaaatcatgatgaatttagttaagaaccata 33749778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 48103399 - 48103508
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||| ||||||||||||||||||||       ||||||||||||||||||||  |||||||||||||| ||||||    ||||||| |||||||    
T  48103399 ttttcgtatgattcttaactaaaaatacatatttttt-ggatataacaaactttgagattattatggatttgaggaaatca---cgaatttagttaagaa 48103494  T
Q  310 ccatatgaaaagca 323  Q
    |||||  |||||||    
T  48103495 ccatacaaaaagca 48103508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 10398390 - 10398462
Alignment:
Q  251 tataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||||||||||||||| |||||| ||||||| |||||||||  |||||| ||||||||||||  |||||||    
T  10398390 tataacaaactttgagaagattatgtatttgaggaaatcatggataatttagttaagaaccatacaaaaagca 10398462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 44148722 - 44148777
Alignment:
Q  255 acaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaac 310  Q
    |||||||||||||||||||||||||| || ||||||  ||||||||||||||||||    
T  44148722 acaaactttgagaaaattatggatttaaggaaatcacagtgaatttaattaagaac 44148777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 208 - 306
Target Start/End: Original strand, 29277867 - 29277963
Alignment:
Q  208 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaa 306  Q
    |||||| ||||||||||||||||||||||||         ||||| |||||| |||||||||||| ||||||| || ||||||||||||||||| ||||    
T  29277867 actttttgtatggttcttaactaaaaataca--ctgttttggatacaacaaagtttgagaaaattttggatttaaggaaatcatggtgaatttagttaa 29277963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 320
Target Start/End: Complemental strand, 38989173 - 38989102
Alignment:
Q  249 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 320  Q
    |||||||||||||||||||||||||| ||||| ||||||| ||| | |||||| |||| ||| ||| |||||    
T  38989173 gatataacaaactttgagaaaattatagatttaagaaaattatgataaatttagttaaaaactatacgaaaa 38989102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 323
Target Start/End: Complemental strand, 47237526 - 47237460
Alignment:
Q  250 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||||||||||||||||||||||||||| ||| ||||       |||||| |||||||||||| ||||||||    
T  47237526 atataacaaactttgagaaaattatggattcgaggaaat-------aatttagttaagaaccataggaaaagca 47237460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 1402990 - 1403032
Alignment:
Q  251 tataacaaactttgagaaaattatggatttgagaaaatcatgg 293  Q
    ||||||||| |||||||||||||| |||||||| |||||||||    
T  1402990 tataacaaattttgagaaaattatagatttgaggaaatcatgg 1403032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 25572883 - 25572925
Alignment:
Q  251 tataacaaactttgagaaaattatggatttgagaaaatcatgg 293  Q
    |||||||||||||||||||||||||| |||||  |||||||||    
T  25572883 tataacaaactttgagaaaattatggttttgaagaaatcatgg 25572925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 239
Target Start/End: Complemental strand, 47237569 - 47237539
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacat 239  Q
    |||||||||||||||||||||||||||||||    
T  47237569 cttttcgtatggttcttaactaaaaatacat 47237539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 314
Target Start/End: Complemental strand, 21581240 - 21581183
Alignment:
Q  257 aaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 314  Q
    ||||||||  ||||| |||||||| | ||||||||| |||||||| ||||||||||||    
T  21581240 aaactttgcaaaaatcatggatttaaaaaaatcatgatgaatttagttaagaaccata 21581183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 24123875 - 24123918
Alignment:
Q  298 tttaattaagaaccatatgaaaagcaattgtacctaagttttctcct 344  Q
    ||||||||||||||||| ||||||   ||||||||||||||||||||    
T  24123875 tttaattaagaaccatacgaaaag---ttgtacctaagttttctcct 24123918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 237
Target Start/End: Original strand, 35665663 - 35665691
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatac 237  Q
    |||||||||||||||||||||||||||||    
T  35665663 cttttcgtatggttcttaactaaaaatac 35665691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 1138589 - 1138702
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  1138589 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgagaaaatcataatgaatttagttaaga 1138687  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  1138688 accatacgaaaagca 1138702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 184 - 323
Target Start/End: Complemental strand, 21259902 - 21259758
Alignment:
Q  184 aggagaaaatttagatacaattcc------acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatgga 277  Q
    |||||||||||||| |||||||||      ||||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||||      
T  21259902 aggagaaaatttaggtacaattccttaggtacttttcttatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatgat 21259804  T
Q  278 tttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||    
T  21259803 tttgaggaaatcatggtgaatttaactaagaaccatacgaaaagca 21259758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 209 - 314
Target Start/End: Complemental strand, 24397387 - 24397283
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  24397387 cttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcat-gtgaatttagttaaga 24397289  T
Q  309 accata 314  Q
    ||||||    
T  24397288 accata 24397283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 20476461 - 20476574
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       | |||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  20476461 cttttcgtatggttcttaactaaaaatacatatttttgtg-atataacaaattttgagaaaattatggatttgaggaaatcatgatgaatttagttaaga 20476559  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  20476560 accatacgaaaagca 20476574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 209 - 314
Target Start/End: Original strand, 21261973 - 21262077
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||    
T  21261973 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattgtggatttgaggaaatcatgatgaatttagttaaga 21262071  T
Q  309 accata 314  Q
    ||||||    
T  21262072 accata 21262077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 33629487 - 33629373
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnn-ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||| |||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  33629487 ttttcgtatgattcttaactaaaaatatatatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatagtgaatttagttaaga 33629388  T
Q  309 accatatgaaaagca 323  Q
    ||||||  |||||||    
T  33629387 accataccaaaagca 33629373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 15855873 - 15855986
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||| |||||||| |   |||| ||||||    
T  15855873 cttttcgtatggttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaaga 15855971  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  15855972 accatacgaaaagca 15855986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 16472985 - 16473098
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||| |||||||| |   |||| ||||||    
T  16472985 cttttcgtatggttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaaga 16473083  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  16473084 accatacgaaaagca 16473098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 35420753 - 35420640
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    ||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||| |||||||| |   |||| ||||||    
T  35420753 cttttcgtatggttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaaga 35420655  T
Q  309 accatatgaaaagca 323  Q
    |||||| ||||||||    
T  35420654 accatacgaaaagca 35420640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 311
Target Start/End: Complemental strand, 37655316 - 37655192
Alignment:
Q  185 ggagaaaatttagatacaattccacttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgaga 284  Q
    |||||||| |||| ||||||||  ||||| ||||||||||||||||||||||||||        | ||||||||||||||||||||||||| |||||||     
T  37655316 ggagaaaacttaggtacaattctgctttttgtatggttcttaactaaaaatacatatttttt--gttataacaaactttgagaaaattatgaatttgagg 37655219  T
Q  285 aaatcatggtgaatttaattaagaacc 311  Q
    || |||||||||||||| |||||||||    
T  37655218 aagtcatggtgaatttagttaagaacc 37655192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 210 - 320
Target Start/End: Original strand, 4266013 - 4266122
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||||||||||||||||||||||||       |||| ||||||||||| ||||||||||||||||||  |||||| |||||||||| |||||||    
T  4266013 ttttcgtatggttcttaactaaaaatacatatttttt-ggatgtaacaaactttaagaaaattatggatttgaagaaatcacggtgaatttagttaagaa 4266111  T
Q  310 ccatatgaaaa 320  Q
    ||||| |||||    
T  4266112 ccatacgaaaa 4266122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 19976292 - 19976405
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||||||||||||||||||||| ||       |||||| | ||||||||||||||||||||||||||| |||||||||| |||||||| || ||    
T  19976292 ttttcgtatggttcttaactaaaaatacgtatttttttggatatgataaactttgagaaaattatggatttgaggaaatcatggtaaatttaatcaataa 19976391  T
Q  310 ccatatgaaaagca 323  Q
    | ||| ||||||||    
T  19976392 ctatacgaaaagca 19976405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 214 - 323
Target Start/End: Complemental strand, 1456158 - 1456050
Alignment:
Q  214 cgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccat 313  Q
    |||||||||||| ||||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |  ||||||||| ||| |||||||    
T  1456158 cgtatggttcttgactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgagaaaattacagtgaatttagttatgaaccat 1456060  T
Q  314 atgaaaagca 323  Q
    || |||||||    
T  1456059 ataaaaagca 1456050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 185 - 354
Target Start/End: Complemental strand, 37552473 - 37552298
Alignment:
Q  185 ggagaaaatttagatacaattccacttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgaga 284  Q
    |||||||| |||| ||||||||  ||||| ||||||||||| ||||||||||||||       |  ||||||||||||||||||||||||| |||||||     
T  37552473 ggagaaaacttaggtacaattctgctttttgtatggttcttgactaaaaatacatatttttttgt-tataacaaactttgagaaaattatgaatttgagg 37552375  T
Q  285 aaatcatggtgaatttaattaagaaccatatgaaaagc--------aattgtacctaagttttctcctattttaaatt 354  Q
    || |||||||||||||| ||||||||| ||  ||||||        |||||||||||||||||||||| |||||||||    
T  37552374 aagtcatggtgaatttagttaagaaccgtacaaaaagcacggaatgaattgtacctaagttttctcct-ttttaaatt 37552298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 210 - 320
Target Start/End: Complemental strand, 13754431 - 13754322
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||||||||||||||||||||||||       | ||||| |||||||||||||||||||| ||||||| |||| |||||||||||| |||||||    
T  13754431 ttttcgtatggttcttaactaaaaatacatatttttttg-atatagcaaactttgagaaaattatgaatttgaggaaattatggtgaatttagttaagaa 13754333  T
Q  310 ccatatgaaaa 320  Q
     |||| |||||    
T  13754332 tcatacgaaaa 13754322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 210 - 320
Target Start/End: Original strand, 43539138 - 43539247
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    ||||||||||||||| ||||| |||||||||       ||||||||||||||||||||||||||||||||| ||||||||| | |||||||| ||||| |    
T  43539138 ttttcgtatggttctgaactataaatacatatttttt-ggatataacaaactttgagaaaattatggatttaagaaaatcacgatgaatttagttaagga 43539236  T
Q  310 ccatatgaaaa 320  Q
    ||||| |||||    
T  43539237 ccatacgaaaa 43539247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 301
Target Start/End: Original strand, 12744857 - 12744947
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaattta 301  Q
    |||| |||||||| |||||||||||||||||       |||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  12744857 tttttgtatggtttttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaattta 12744947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 320
Target Start/End: Original strand, 12807942 - 12808051
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    ||||||||||||| |||||||||||||||||       | |||||||||||||||| |||||||||||||| || ||||||||||||||||| | |||||    
T  12807942 ttttcgtatggtttttaactaaaaatacatattttttag-atataacaaactttgaaaaaattatggatttaaggaaatcatggtgaatttagtcaagaa 12808040  T
Q  310 ccatatgaaaa 320  Q
     |||| |||||    
T  12808041 tcatacgaaaa 12808051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 780895 - 780824
Alignment:
Q  250 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaag 321  Q
    |||||||||||||| |||||||||||||||| || ||||||||||||||||||| ||||  |||| ||||||    
T  780895 atataacaaactttaagaaaattatggatttaaggaaatcatggtgaatttaatcaagagtcatacgaaaag 780824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 249 - 320
Target Start/End: Complemental strand, 32623317 - 32623246
Alignment:
Q  249 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 320  Q
    ||||||||||||||||||||||||||||||||    ||||||| ||||||||| |||||||||||| |||||    
T  32623317 gatataacaaactttgagaaaattatggatttacagaaatcatagtgaatttagttaagaaccatacgaaaa 32623246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 8364729 - 8364668
Alignment:
Q  252 ataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccat 313  Q
    |||||||||||||||| ||||||  |||| |||||||||||||||||||| |||||||||||    
T  8364729 ataacaaactttgagagaattataaatttaagaaaatcatggtgaatttagttaagaaccat 8364668  T

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Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 209 - 302
Target Start/End: Complemental strand, 1164937 - 1164844
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaa 302  Q
    ||||||||||||||||||| |||||||| |||       |||||||| ||||||| | |||||||||||||| | ||||||||||| |||||||    
T  1164937 cttttcgtatggttcttaattaaaaataaatatttttttggatataataaacttttaaaaaattatggatttaaaaaaatcatggtaaatttaa 1164844  T

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Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 320
Target Start/End: Original strand, 18236536 - 18236608
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 320  Q
    |||||||||||||||||| ||||||||| |||| ||||||||| |  ||||||| |||||||||||| |||||    
T  18236536 ggatataacaaactttgaaaaaattatgtatttaagaaaatcacgacgaatttagttaagaaccatacgaaaa 18236608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 209 - 314
Target Start/End: Original strand, 35806965 - 35807069
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||| ||||||||||||||||||||||||        | |||||||||||||| | |||||||  ||||||||||||||||||||||||||  | |||    
T  35806965 cttttcatatggttcttaactaaaaatacat-cttttttgaatataacaaactttaaaaaaattaaagatttgagaaaatcatggtgaatttaggttaga 35807063  T
Q  309 accata 314  Q
    ||||||    
T  35807064 accata 35807069  T

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Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 323
Target Start/End: Complemental strand, 21591300 - 21591241
Alignment:
Q  264 gagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||||||||||||||||| ||||||||||||||||| || | ||||||| ||||||||    
T  21591300 gagaaaattatggatttgaggaaatcatggtgaatttagttcacaaccatacgaaaagca 21591241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 323
Target Start/End: Complemental strand, 21595417 - 21595358
Alignment:
Q  264 gagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||||||||||||||||| ||||||||||||||||| || | ||||||| ||||||||    
T  21595417 gagaaaattatggatttgaggaaatcatggtgaatttagttcacaaccatacgaaaagca 21595358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 314
Target Start/End: Complemental strand, 35276394 - 35276329
Alignment:
Q  249 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 314  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||||| |||||| |||  |||||||    
T  35276394 gatataataaactttaagaaaattatggatttgataaaatcatggtaaatttagttataaaccata 35276329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 2529066 - 2529124
Alignment:
Q  265 agaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||||||||||||| || |||||| |||||||||| |||||||||| | ||||||||    
T  2529066 agaaaattatggatttaaggaaatcacggtgaatttagttaagaaccacacgaaaagca 2529124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 2538467 - 2538507
Alignment:
Q  251 tataacaaactttgagaaaattatggatttgagaaaatcat 291  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  2538467 tataacaaactctgagaaaattatggatttgaaaaaatcat 2538507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 314
Target Start/End: Original strand, 28056179 - 28056226
Alignment:
Q  267 aaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 314  Q
    |||||||||||||| ||||||||||| | |||||| ||||||||||||    
T  28056179 aaaattatggatttaagaaaatcatgataaatttagttaagaaccata 28056226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 285
Target Start/End: Complemental strand, 12257614 - 12257580
Alignment:
Q  251 tataacaaactttgagaaaattatggatttgagaa 285  Q
    ||||||||||||||| |||||||||||||||||||    
T  12257614 tataacaaactttgaaaaaattatggatttgagaa 12257580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 735346 - 735378
Alignment:
Q  250 atataacaaactttgagaaaattatggatttga 282  Q
    |||||||||||||||||||||||||| ||||||    
T  735346 atataacaaactttgagaaaattatgaatttga 735378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 48156 - 48269
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||||| |||| ||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  48156 cttttcgtatggtttttaattaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaga 48254  T
Q  309 accatatgaaaagca 323  Q
    || ||| ||||||||    
T  48255 actatacgaaaagca 48269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 7117 - 7229
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    |||||||||| |||||||||||||||| |||       |||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||    
T  7117 ttttcgtatgattcttaactaaaaatatatatatttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttagttaagaa 7215  T
Q  310 ccatatgaaaagca 323  Q
    ||||| ||||||||    
T  7216 ccatacgaaaagca 7229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 182 - 323
Target Start/End: Complemental strand, 3567 - 3421
Alignment:
Q  182 aaaggagaaaatttagatacaattcc------acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatg 275  Q
    |||||||||||||||| ||||||||       |||||||||||||||||||| ||||||||||||       |||||||||||||||||| ||||||||     
T  3567 aaaggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaaaatacatatttttt-ggatataacaaactttgataaaattata 3469  T
Q  276 gatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
     ||||||| ||||||||||||||||||||||||||||||  |||||||    
T  3468 aatttgaggaaatcatggtgaatttaattaagaaccatacaaaaagca 3421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 321
Target Start/End: Original strand, 51093 - 51204
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 308  Q
    |||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||| |||| || ||||||| ||||||||| ||||||    
T  51093 cttttcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatgaatttaaggaaatcatagtgaatttagttaaga 51191  T
Q  309 accatatgaaaag 321  Q
    |||||||||||||    
T  51192 accatatgaaaag 51204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 214 - 323
Target Start/End: Original strand, 10151 - 10258
Alignment:
Q  214 cgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccat 313  Q
    ||||||||||||||||||||||| |||       ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||  ||    
T  10151 cgtatggttcttaactaaaaatatatattttt--ggatataacaaactttgagaaaattatggatgtgagaaaatcatggtgaatttacttaagaattat 10248  T
Q  314 atgaaaagca 323  Q
    | ||||||||    
T  10249 acgaaaagca 10258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 216 - 323
Target Start/End: Complemental strand, 2074 - 1967
Alignment:
Q  216 tatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatat 315  Q
    |||||||||||||||||||||| ||        |||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||     
T  2074 tatggttcttaactaaaaatacgtatttttttagatataacaaactttgtgaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatac 1975  T
Q  316 gaaaagca 323  Q
     |||||||    
T  1974 aaaaagca 1967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 339
Target Start/End: Original strand, 94240 - 94333
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatga--aaagcaattgtacctaagtttt 339  Q
    |||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||||||||||||   ||| |||| ||||||||||||    
T  94240 ggatataacaaactatgagaaaattttggatttgataaaatcatggtgaatttagttaagaaccatatgatttaaggaattttacctaagtttt 94333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 14473 - 14585
Alignment:
Q  210 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 309  Q
    ||||| |||||| ||||||||||||||||||       |||||||||| |||||||||||||||||||| |||  || | |||||||||||| |||||||    
T  14473 ttttcctatggtacttaactaaaaatacatattattt-ggatataacagactttgagaaaattatggatatgacgaagtaatggtgaatttagttaagaa 14571  T
Q  310 ccatatgaaaagca 323  Q
    | ||| ||||||||    
T  14572 cgatacgaaaagca 14585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 323
Target Start/End: Original strand, 5797 - 5848
Alignment:
Q  272 tatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 323  Q
    |||||||||||| ||||||||||||||||| |||||||||||| ||||||||    
T  5797 tatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaagca 5848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 5731 - 5762
Alignment:
Q  209 cttttcgtatggttcttaactaaaaatacata 240  Q
    ||||||||||||||||||||||||||||||||    
T  5731 cttttcgtatggttcttaactaaaaatacata 5762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 322
Target Start/End: Complemental strand, 138380 - 138306
Alignment:
Q  248 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagc 322  Q
    |||||||| ||||||| | |||| ||||||||| ||||||||||| |||||||| ||||||| |||| |||||||    
T  138380 ggatataataaactttaaaaaaaatatggatttaagaaaatcatgatgaatttagttaagaatcatacgaaaagc 138306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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