View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9361A_low_196 (Length: 245)
Name: NF9361A_low_196
Description: NF9361A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9361A_low_196 |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 2098096 - 2097883
Alignment:
| Q |
11 |
gtttggtgttcccgtgttggtgactttcctggtaatgtaataccacgggttggagataccctaataatggagtatttgttttttaattggaggacgacac |
110 |
Q |
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| T |
2098096 |
gtttggtgttcccgtgttggtgactttcctcgtaatgtaataccacgggttggagataccctaataatggagtatttgttttataattggaggacgacac |
2097997 |
T |
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| Q |
111 |
agaagtactagtataaaagtacgaaatcatgattgaaaagatacaacagttttaccatcctatcatcattgaggaaatgcaaacacctgaataaatagga |
210 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
2097996 |
agaagtactagtataaaagtacgaaatcatgaatgaaaagatacaacagttttaccatcctatcatcattgaggaaatgcaaacacctgaaaaaatagga |
2097897 |
T |
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| Q |
211 |
ggagaggcggaaat |
224 |
Q |
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|||||||||||||| |
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| T |
2097896 |
ggagaggcggaaat |
2097883 |
T |
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