View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9361A_low_261 (Length: 228)

Name: NF9361A_low_261
Description: NF9361A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9361A_low_261
NF9361A_low_261
[»] chr4 (61 HSPs)
chr4 (1-224)||(34633465-34633688)
chr4 (6-97)||(40699440-40699531)
chr4 (6-60)||(34526289-34526343)
chr4 (20-96)||(42697285-42697363)
chr4 (6-67)||(29877719-29877780)
chr4 (6-67)||(48591369-48591430)
chr4 (28-88)||(825784-825844)
chr4 (20-67)||(488329-488376)
chr4 (4-67)||(7148850-7148913)
chr4 (20-67)||(18630840-18630887)
chr4 (20-67)||(36254981-36255028)
chr4 (4-67)||(43699394-43699457)
chr4 (24-67)||(48667768-48667811)
chr4 (6-60)||(11256613-11256667)
chr4 (41-87)||(36740886-36740932)
chr4 (9-67)||(42153107-42153165)
chr4 (39-88)||(7148753-7148802)
chr4 (6-59)||(17222909-17222962)
chr4 (6-67)||(23297515-23297576)
chr4 (39-88)||(28663409-28663458)
chr4 (6-67)||(36740984-36741045)
chr4 (6-67)||(48687014-48687075)
chr4 (39-87)||(488440-488488)
chr4 (4-72)||(24101880-24101948)
chr4 (39-87)||(28074347-28074395)
chr4 (20-60)||(42611821-42611861)
chr4 (4-67)||(9153527-9153590)
chr4 (4-83)||(10046310-10046389)
chr4 (20-67)||(12495589-12495636)
chr4 (24-67)||(38345767-38345810)
chr4 (20-59)||(48721914-48721953)
chr4 (43-97)||(825654-825708)
chr4 (34-88)||(9319156-9319210)
chr4 (8-58)||(14987554-14987604)
chr4 (6-60)||(22273860-22273914)
chr4 (6-64)||(22397253-22397311)
chr4 (6-60)||(23335722-23335776)
chr4 (7-60)||(8130560-8130613)
chr4 (39-88)||(39932810-39932859)
chr4 (6-67)||(41228983-41229044)
chr4 (26-58)||(18424232-18424264)
chr4 (39-91)||(52274176-52274228)
chr4 (4-67)||(15179895-15179958)
chr4 (6-65)||(31022480-31022539)
chr4 (6-53)||(33534008-33534055)
chr4 (20-67)||(41071444-41071491)
chr4 (39-90)||(43136673-43136724)
chr4 (6-60)||(897050-897104)
chr4 (6-60)||(2702667-2702721)
chr4 (29-67)||(38876067-38876105)
chr4 (22-67)||(2547992-2548037)
chr4 (26-67)||(3564306-3564347)
chr4 (6-67)||(8601281-8601342)
chr4 (6-67)||(19414195-19414256)
chr4 (6-67)||(28074444-28074505)
chr4 (34-67)||(35405791-35405824)
chr4 (6-67)||(948153-948216)
chr4 (6-58)||(4603286-4603338)
chr4 (6-54)||(15184626-15184674)
chr4 (6-58)||(23284745-23284797)
chr4 (6-58)||(47202905-47202957)
[»] chr6 (34 HSPs)
chr6 (21-97)||(10874079-10874155)
chr6 (143-219)||(14301685-14301761)
chr6 (4-66)||(9201667-9201729)
chr6 (21-67)||(35071373-35071419)
chr6 (22-67)||(3210934-3210979)
chr6 (8-60)||(10755235-10755287)
chr6 (20-67)||(23239341-23239388)
chr6 (19-65)||(7267875-7267921)
chr6 (42-96)||(10755339-10755393)
chr6 (18-72)||(30534044-30534098)
chr6 (6-67)||(2034174-2034235)
chr6 (6-58)||(2255814-2255866)
chr6 (6-60)||(12816853-12816908)
chr6 (6-65)||(32675836-32675895)
chr6 (6-67)||(6758707-6758769)
chr6 (6-60)||(10687390-10687444)
chr6 (26-88)||(24419501-24419563)
chr6 (39-88)||(2034285-2034334)
chr6 (6-67)||(6752892-6752953)
chr6 (20-57)||(9202354-9202391)
chr6 (39-88)||(21025283-21025332)
chr6 (20-97)||(25430681-25430758)
chr6 (24-67)||(2027121-2027164)
chr6 (20-67)||(12817053-12817100)
chr6 (24-67)||(21891283-21891326)
chr6 (20-67)||(29623423-29623469)
chr6 (6-68)||(8010989-8011050)
chr6 (6-60)||(9764343-9764397)
chr6 (4-58)||(17915023-17915077)
chr6 (34-67)||(21025164-21025197)
chr6 (6-67)||(32165206-32165267)
chr6 (40-88)||(2027233-2027281)
chr6 (40-88)||(12817228-12817276)
chr6 (6-58)||(35111304-35111356)
[»] chr5 (66 HSPs)
chr5 (11-99)||(13060515-13060603)
chr5 (6-88)||(41419581-41419663)
chr5 (6-67)||(24030294-24030355)
chr5 (4-67)||(42852099-42852162)
chr5 (6-95)||(17657322-17657410)
chr5 (6-65)||(28625560-28625619)
chr5 (9-60)||(41059741-41059792)
chr5 (6-77)||(43268571-43268642)
chr5 (26-88)||(28357241-28357303)
chr5 (6-67)||(5559864-5559925)
chr5 (6-59)||(11163235-11163288)
chr5 (6-66)||(1943075-1943135)
chr5 (20-72)||(7364249-7364301)
chr5 (20-60)||(35083333-35083373)
chr5 (20-67)||(3977567-3977614)
chr5 (6-67)||(10537171-10537233)
chr5 (6-60)||(11912054-11912108)
chr5 (42-88)||(28625461-28625507)
chr5 (39-101)||(41534591-41534653)
chr5 (4-60)||(14243902-14243959)
chr5 (22-67)||(39154706-39154751)
chr5 (20-99)||(12986924-12987006)
chr5 (7-67)||(29659141-29659201)
chr5 (20-60)||(41125768-41125808)
chr5 (24-67)||(3520452-3520495)
chr5 (20-67)||(6125380-6125427)
chr5 (21-60)||(29136778-29136817)
chr5 (20-67)||(29922134-29922181)
chr5 (20-67)||(40452422-40452469)
chr5 (6-86)||(7984185-7984258)
chr5 (4-58)||(15167668-15167722)
chr5 (9-67)||(28357435-28357493)
chr5 (42-88)||(42706777-42706823)
chr5 (41-98)||(6144709-6144766)
chr5 (7-60)||(9477417-9477470)
chr5 (6-59)||(11991384-11991437)
chr5 (28-65)||(15364103-15364140)
chr5 (6-67)||(27805995-27806056)
chr5 (20-65)||(29658002-29658047)
chr5 (6-67)||(35536925-35536985)
chr5 (39-88)||(40696982-40697031)
chr5 (26-59)||(40697106-40697139)
chr5 (6-67)||(43265877-43265938)
chr5 (4-67)||(2577373-2577437)
chr5 (22-65)||(40152823-40152866)
chr5 (18-85)||(42706897-42706964)
chr5 (56-94)||(3520589-3520627)
chr5 (6-60)||(6144818-6144872)
chr5 (20-58)||(7364121-7364159)
chr5 (20-65)||(12467359-12467407)
chr5 (6-67)||(1576710-1576771)
chr5 (6-67)||(1608044-1608105)
chr5 (6-67)||(2878622-2878683)
chr5 (29-58)||(9251712-9251741)
chr5 (10-67)||(13625465-13625522)
chr5 (6-67)||(15414072-15414133)
chr5 (26-67)||(17868149-17868190)
chr5 (7-60)||(29418704-29418757)
chr5 (39-87)||(35536823-35536872)
chr5 (10-55)||(43319087-43319132)
chr5 (20-67)||(589246-589294)
chr5 (24-88)||(3432727-3432790)
chr5 (20-60)||(3714978-3715018)
chr5 (6-58)||(12298925-12298977)
chr5 (29-65)||(13739332-13739368)
chr5 (26-58)||(36106689-36106721)
[»] chr7 (36 HSPs)
chr7 (6-85)||(46744033-46744112)
chr7 (7-65)||(33204915-33204973)
chr7 (6-67)||(29378725-29378786)
chr7 (6-67)||(34923013-34923074)
chr7 (39-95)||(29378619-29378675)
chr7 (8-60)||(38372640-38372692)
chr7 (39-90)||(47511022-47511073)
chr7 (6-60)||(1401153-1401207)
chr7 (10-60)||(14691251-14691301)
chr7 (7-65)||(47654361-47654419)
chr7 (7-68)||(22032843-22032904)
chr7 (20-60)||(30181644-30181684)
chr7 (23-67)||(37465831-37465875)
chr7 (7-67)||(43818823-43818883)
chr7 (40-91)||(35713561-35713612)
chr7 (24-67)||(44613418-44613461)
chr7 (29-67)||(26331868-26331906)
chr7 (6-60)||(29390503-29390557)
chr7 (21-67)||(30094674-30094720)
chr7 (6-59)||(39279509-39279563)
chr7 (6-59)||(33288028-33288081)
chr7 (62-102)||(1400940-1400980)
chr7 (20-56)||(23356447-23356483)
chr7 (20-60)||(32358703-32358743)
chr7 (39-83)||(33288155-33288199)
chr7 (41-87)||(17944509-17944555)
chr7 (39-88)||(1054124-1054173)
chr7 (20-65)||(8180538-8180583)
chr7 (6-67)||(35809170-35809231)
chr7 (8-72)||(12473435-12473499)
chr7 (6-66)||(25908374-25908434)
chr7 (24-72)||(28759777-28759825)
chr7 (20-96)||(29778424-29778500)
chr7 (6-58)||(35246749-35246801)
chr7 (39-91)||(46743928-46743980)
chr7 (20-60)||(49104320-49104360)
[»] chr8 (50 HSPs)
chr8 (6-88)||(9130941-9131023)
chr8 (6-60)||(32131520-32131574)
chr8 (6-67)||(25333646-25333707)
chr8 (7-67)||(31079111-31079171)
chr8 (39-83)||(32213078-32213122)
chr8 (39-91)||(34286619-34286671)
chr8 (24-88)||(35168362-35168426)
chr8 (23-91)||(35286025-35286093)
chr8 (1-60)||(2019592-2019651)
chr8 (20-67)||(10213789-10213836)
chr8 (24-67)||(28879153-28879196)
chr8 (21-67)||(32975782-32975828)
chr8 (6-60)||(34286516-34286570)
chr8 (21-58)||(8752901-8752938)
chr8 (6-67)||(9131073-9131134)
chr8 (10-67)||(24350464-24350521)
chr8 (26-67)||(25465792-25465833)
chr8 (6-67)||(36907589-36907650)
chr8 (7-67)||(30974070-30974130)
chr8 (20-67)||(28280803-28280850)
chr8 (20-67)||(32212960-32213007)
chr8 (26-87)||(35453392-35453454)
chr8 (46-94)||(10480063-10480112)
chr8 (6-67)||(16972301-16972362)
chr8 (39-88)||(28879039-28879088)
chr8 (6-67)||(35055502-35055562)
chr8 (39-87)||(10213707-10213755)
chr8 (20-60)||(16926680-16926720)
chr8 (40-88)||(18396917-18396965)
chr8 (28-67)||(2669750-2669789)
chr8 (47-90)||(9781194-9781237)
chr8 (39-90)||(13265463-13265514)
chr8 (20-67)||(25671835-25671882)
chr8 (20-58)||(32924167-32924205)
chr8 (22-67)||(10298872-10298916)
chr8 (6-67)||(12607159-12607220)
chr8 (24-65)||(14724912-14724953)
chr8 (6-59)||(19925342-19925395)
chr8 (26-67)||(24087271-24087312)
chr8 (6-67)||(34338328-34338389)
chr8 (6-67)||(42363262-42363323)
chr8 (43-91)||(8752784-8752832)
chr8 (40-88)||(11460727-11460775)
chr8 (40-88)||(11461240-11461288)
chr8 (6-58)||(11988276-11988328)
chr8 (24-60)||(14942522-14942558)
chr8 (23-67)||(16706045-16706089)
chr8 (7-67)||(24866896-24866956)
chr8 (11-67)||(38338796-38338852)
chr8 (20-60)||(41145348-41145388)
[»] chr2 (35 HSPs)
chr2 (6-67)||(8832537-8832598)
chr2 (6-67)||(38216099-38216160)
chr2 (4-100)||(5516154-5516250)
chr2 (4-60)||(29774823-29774879)
chr2 (6-67)||(4027005-4027066)
chr2 (20-67)||(36501460-36501507)
chr2 (34-88)||(9140654-9140708)
chr2 (6-68)||(23956208-23956270)
chr2 (11-72)||(42064936-42064997)
chr2 (39-87)||(37419899-37419947)
chr2 (24-67)||(887510-887553)
chr2 (20-67)||(1120379-1120426)
chr2 (24-88)||(17317160-17317226)
chr2 (10-65)||(21788541-21788596)
chr2 (6-60)||(7480851-7480905)
chr2 (6-67)||(4533402-4533463)
chr2 (22-67)||(5903634-5903679)
chr2 (20-65)||(25836660-25836704)
chr2 (21-58)||(35235200-35235237)
chr2 (23-67)||(755656-755700)
chr2 (7-67)||(4004900-4004960)
chr2 (6-77)||(4090569-4090640)
chr2 (29-60)||(37420009-37420040)
chr2 (6-57)||(44475474-44475525)
chr2 (41-88)||(45163944-45163991)
chr2 (10-60)||(12950067-12950117)
chr2 (9-67)||(42839266-42839324)
chr2 (6-67)||(1768772-1768833)
chr2 (22-67)||(15155909-15155954)
chr2 (6-67)||(33321257-33321318)
chr2 (6-58)||(446507-446559)
chr2 (20-60)||(11777078-11777118)
chr2 (6-58)||(12238440-12238492)
chr2 (23-59)||(13056280-13056316)
chr2 (7-59)||(38471744-38471796)
[»] chr1 (55 HSPs)
chr1 (20-88)||(38781172-38781239)
chr1 (43-94)||(45267440-45267491)
chr1 (20-67)||(48819393-48819440)
chr1 (6-67)||(1005420-1005481)
chr1 (6-67)||(15515292-15515353)
chr1 (6-67)||(22593352-22593413)
chr1 (6-57)||(3069809-3069860)
chr1 (20-67)||(9572729-9572776)
chr1 (6-65)||(37329359-37329418)
chr1 (41-83)||(31378809-31378851)
chr1 (6-67)||(4068195-4068256)
chr1 (6-67)||(6337701-6337762)
chr1 (6-67)||(37712147-37712208)
chr1 (39-91)||(16889021-16889073)
chr1 (20-60)||(28870297-28870337)
chr1 (21-64)||(10082346-10082389)
chr1 (20-67)||(28690098-28690145)
chr1 (6-65)||(37156867-37156926)
chr1 (6-59)||(391255-391309)
chr1 (42-88)||(1005321-1005367)
chr1 (7-97)||(1683816-1683906)
chr1 (6-60)||(16888918-16888972)
chr1 (42-88)||(36178517-36178563)
chr1 (21-66)||(23544887-23544931)
chr1 (20-88)||(35282518-35282586)
chr1 (6-67)||(41196655-41196716)
chr1 (4-65)||(46689497-46689558)
chr1 (4-88)||(15631982-15632066)
chr1 (20-60)||(41003481-41003521)
chr1 (6-54)||(45267546-45267594)
chr1 (4-59)||(10850019-10850074)
chr1 (20-67)||(13039041-13039088)
chr1 (4-67)||(17814268-17814331)
chr1 (39-86)||(26936842-26936889)
chr1 (4-51)||(49738262-49738309)
chr1 (6-64)||(14460989-14461047)
chr1 (26-60)||(26988248-26988282)
chr1 (6-59)||(35590210-35590264)
chr1 (6-72)||(36259231-36259297)
chr1 (29-67)||(47413475-47413513)
chr1 (6-67)||(10365250-10365311)
chr1 (7-72)||(12256687-12256752)
chr1 (6-67)||(15791463-15791524)
chr1 (6-67)||(17628370-17628431)
chr1 (22-67)||(20169360-20169405)
chr1 (6-67)||(32497217-32497278)
chr1 (28-89)||(34265671-34265732)
chr1 (20-57)||(37431228-37431265)
chr1 (20-65)||(46500947-46500992)
chr1 (39-83)||(6337812-6337856)
chr1 (6-58)||(8410213-8410265)
chr1 (26-58)||(14862933-14862965)
chr1 (26-58)||(14868485-14868517)
chr1 (44-88)||(37431147-37431191)
chr1 (24-60)||(46473192-46473228)
[»] chr3 (48 HSPs)
chr3 (26-95)||(21720907-21720974)
chr3 (6-67)||(40240522-40240583)
chr3 (8-65)||(40581023-40581080)
chr3 (7-60)||(52895357-52895410)
chr3 (38-90)||(29270462-29270514)
chr3 (6-65)||(42956126-42956185)
chr3 (6-60)||(48597818-48597873)
chr3 (10-72)||(10449061-10449123)
chr3 (9-67)||(38524171-38524229)
chr3 (6-67)||(20174885-20174946)
chr3 (6-59)||(43079887-43079940)
chr3 (11-67)||(3845939-3845995)
chr3 (20-88)||(23816095-23816163)
chr3 (39-87)||(43079990-43080038)
chr3 (23-67)||(46573399-46573443)
chr3 (28-67)||(4974413-4974452)
chr3 (20-91)||(10521248-10521319)
chr3 (6-65)||(34707660-34707719)
chr3 (26-72)||(27769749-27769795)
chr3 (21-67)||(37243561-37243607)
chr3 (39-93)||(52421197-52421250)
chr3 (6-67)||(53261712-53261774)
chr3 (6-67)||(17752076-17752137)
chr3 (6-67)||(19053396-19053457)
chr3 (22-67)||(33946495-33946540)
chr3 (6-67)||(45331240-45331301)
chr3 (22-67)||(53787697-53787742)
chr3 (24-60)||(22809145-22809181)
chr3 (6-58)||(29830593-29830645)
chr3 (26-89)||(37600981-37601044)
chr3 (6-58)||(37778213-37778265)
chr3 (7-67)||(43376776-43376836)
chr3 (39-91)||(52021224-52021276)
chr3 (6-54)||(53217998-53218046)
chr3 (71-101)||(16072948-16072978)
chr3 (53-99)||(35480301-35480347)
chr3 (1-67)||(38631067-38631133)
chr3 (6-67)||(1516043-1516104)
chr3 (26-67)||(3876208-3876249)
chr3 (28-65)||(7292779-7292816)
chr3 (6-59)||(20685865-20685918)
chr3 (6-67)||(21720987-21721048)
chr3 (42-87)||(23555523-23555568)
chr3 (6-67)||(48816795-48816856)
chr3 (20-88)||(10667492-10667560)
chr3 (28-60)||(30383867-30383899)
chr3 (4-60)||(37586270-37586326)
chr3 (41-89)||(52895431-52895479)
[»] scaffold0332 (2 HSPs)
scaffold0332 (6-65)||(14693-14752)
scaffold0332 (26-77)||(14788-14840)
[»] scaffold0015 (1 HSPs)
scaffold0015 (25-67)||(48573-48615)
[»] scaffold0157 (1 HSPs)
scaffold0157 (20-67)||(24841-24888)
[»] scaffold0512 (1 HSPs)
scaffold0512 (5-67)||(4143-4205)
[»] scaffold0022 (2 HSPs)
scaffold0022 (39-87)||(89309-89357)
scaffold0022 (18-60)||(89233-89275)
[»] scaffold0004 (1 HSPs)
scaffold0004 (6-60)||(227787-227841)
[»] scaffold0024 (1 HSPs)
scaffold0024 (6-42)||(97179-97215)


Alignment Details
Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 34633465 - 34633688
Alignment:
Q  1 atgaaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtcctaagtg 100  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34633465 atgaaatacaattttcataagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtcctaagtg 34633564  T
Q  101 taacaacatatgtttgtgcagttgcggataaccttcaatcaaaaagaaacttacgaagacggtggttttccacattcaagcccaatcgaagaagcacgaa 200  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34633565 taacaacatatgtttgtgtagttgcggataaccttcaatctaaaagaaacttacgaagacggtggttttccacattcaagcccaatcgaagaagcatgaa 34633664  T
Q  201 cagcaaccaaaaaagcaagtcctg 224  Q
    ||||| ||||||||||||||||||    
T  34633665 cagcatccaaaaaagcaagtcctg 34633688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 40699440 - 40699531
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtcctaa 97  Q
    ||||| |||||| |||||||||||||||||||||||||||| ||||||| ||||| |||||| |||||||||| |||| ||||||| |||||    
T  40699440 atacagttttcgtaagtgagaacttatgaattaacataaaatcttatttgtttgcataagctcaaaaataagttaatcaaaacaggccctaa 40699531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 34526343 - 34526289
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  34526343 atacaattttccatagtgagaacttatgaattaacataaaagcttatttatttgc 34526289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 42697363 - 42697285
Alignment:
Q  20 agtgagaacttatgaattaacataaaa-gcttatttatttgcgtaagct-taaaaataagtcaatccaaacaggtccta 96  Q
    ||||||||||||| ||||||||||||| |||||||||||||| ||||||  ||||||||| ||||||||||||| ||||    
T  42697363 agtgagaacttataaattaacataaaaagcttatttatttgcataagctaaaaaaataagccaatccaaacaggcccta 42697285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 29877719 - 29877780
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  29877719 atacaatttttgttagtgagaacttatgaattaacataaaagcttatatatttgcataagct 29877780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 48591430 - 48591369
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  | ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  48591430 atacaattttcgttaatgagaacttatgaattaacgtaaaagcttatttatttgcataagct 48591369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 825784 - 825844
Alignment:
Q  28 cttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||||||||||||| ||||||||||||| |||||| |||||| || ||||||||||    
T  825784 cttatgaattaacataaaatcttatttatttgcataagctaaaaaattagccaatccaaac 825844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 488376 - 488329
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||    
T  488376 agtgagaacttatgaattaacataaaagcttatttatttccataagct 488329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 7148850 - 7148913
Alignment:
Q  4 aaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||   ||| ||||||||||||||| ||||||||||||||||||||| ||||||    
T  7148850 aaatacaattttctttagtcagaacttatgaattagcataaaagcttatttatttgcataagct 7148913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 18630887 - 18630840
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  18630887 agtgagaacttatgaattaatataaaagcttatttatttgcataagct 18630840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 36255028 - 36254981
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  36255028 agtgagaacttatgaattaacataaaagcttatttatctgcataagct 36254981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 43699457 - 43699394
Alignment:
Q  4 aaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||   |||| |||||||||||||||||||||| ||||||||||||| ||||||    
T  43699457 aaatacaattttcactagtgggaacttatgaattaacataaaaacttatttatttgcataagct 43699394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 48667768 - 48667811
Alignment:
Q  24 agaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  48667768 agaacttatgaattaacataaaagcttatttatttgcataagct 48667811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 11256667 - 11256613
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||||| |  || ||||||||||||||||||||||||||||||||||||||    
T  11256667 atacaattttagttagcgagaacttatgaattaacataaaagcttatttatttgc 11256613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 36740932 - 36740886
Alignment:
Q  41 ataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaa 87  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||    
T  36740932 ataaaagcttatttatttgcataagctcaaaaataagtcaatccaaa 36740886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 42153165 - 42153107
Alignment:
Q  9 caattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||  ||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  42153165 caattttcgttagtgacaactcatgaattaacataaaagcttatttatttgcataagct 42153107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 7148802 - 7148753
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    |||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  7148802 acataaaagcttatttatttgcataagctcaaaaataagccaatccaaac 7148753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 17222909 - 17222962
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttg 59  Q
    ||||||||||||  ||| ||||||||||||||||||||||| ||||||||||||    
T  17222909 atacaattttcgttagttagaacttatgaattaacataaaaacttatttatttg 17222962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 23297515 - 23297576
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| |  || |||||||||||||||| ||||||||||||||||||||| ||||||    
T  23297515 atacaatttttgttagcgagaacttatgaattagcataaaagcttatttatttgcataagct 23297576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 28663458 - 28663409
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||||||||    
T  28663458 acataaaagctcatttatttgcataagctcaaaaataagtcaatccaaac 28663409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 36740984 - 36741045
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||   ||||||||||||||||| |||| |||||||||||||||||| ||||||    
T  36740984 atacaattttcattagtgagaacttatgaatcaacacaaaagcttatttatttgcataagct 36741045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 48687014 - 48687075
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||   |||||||||||||||||||||||| ||| |||||||||||| ||||||    
T  48687014 atacaattttcattagtgagaacttatgaattaacatataagtttatttatttgcataagct 48687075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 488440 - 488488
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaa 87  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||||||    
T  488440 acataaaagcttacttatttgcataagctcaaaaataagtcaatccaaa 488488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 24101948 - 24101880
Alignment:
Q  4 aaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaa 72  Q
    |||||||||||| |   |||||||||||| ||||||||||||| ||||||||||||| |||||| ||||    
T  24101948 aaatacaatttttgtccgtgagaacttataaattaacataaaaacttatttatttgcataagctcaaaa 24101880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 28074395 - 28074347
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaa 87  Q
    |||||||||||||||||||||| |||||  |||||||||||||||||||    
T  28074395 acataaaagcttatttatttgcataagcgaaaaaataagtcaatccaaa 28074347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 42611861 - 42611821
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  42611861 agtgacaacttatgaattaacataaaagcttatttatttgc 42611821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 9153590 - 9153527
Alignment:
Q  4 aaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||   |||||||| |||| |||||||||||||| |||||||||||| ||||||    
T  9153590 aaatacaattttcatcagtgagaatttataaattaacataaaagtttatttatttgcataagct 9153527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 10046310 - 10046389
Alignment:
Q  4 aaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatc 83  Q
    ||||||||||||||  | ||| ||| ||| |||||||||||||||||| |||||| | |||||| |||||||||| ||||    
T  10046310 aaatacaattttcgttattgaaaacatataaattaacataaaagcttaattatttacataagctcaaaaataagttaatc 10046389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 12495636 - 12495589
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||| ||||||||||||| ||||||||||||| ||||||    
T  12495636 agtgagaacttataaattaacataaaaacttatttatttgcataagct 12495589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 38345810 - 38345767
Alignment:
Q  24 agaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||||||||||||||||||||| | ||||||    
T  38345810 agaacttatgaattaacataaaagcttatttatttacataagct 38345767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 48721914 - 48721953
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttg 59  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  48721914 agtgagaacttatgaattaatataaaagcttatttatttg 48721953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 825708 - 825654
Alignment:
Q  43 aaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtcctaa 97  Q
    |||||||||||||||||| |||||| ||||| ||| ||||||||||||| |||||    
T  825708 aaaagcttatttatttgcataagctcaaaaagaagccaatccaaacaggccctaa 825654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 9319156 - 9319210
Alignment:
Q  34 aattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||||||||||||||||||| | |||||| ||||||||| ||| ||||||    
T  9319156 aattaacataaaagcttatttatttacataagctaaaaaataagccaaaccaaac 9319210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 14987604 - 14987554
Alignment:
Q  8 acaattttcgaaagtgagaacttatgaattaacataaaagcttatttattt 58  Q
    ||||||||||  |||||||||||||||||||| |||||| |||||||||||    
T  14987604 acaattttcgttagtgagaacttatgaattaatataaaaacttatttattt 14987554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 22273860 - 22273914
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||||| |  |||||||| ||||||||||||||||||| ||||||||||||    
T  22273860 atacaatttttgttagtgagaagttatgaattaacataaaagtttatttatttgc 22273914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 22397311 - 22397253
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaa 64  Q
    ||||||||||||  ||| ||| ||||||||||||| |||||||||| ||||||||||||    
T  22397311 atacaattttcgttagtaagatcttatgaattaacttaaaagcttaattatttgcgtaa 22397253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 23335722 - 23335776
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||||||  |||||||||||||||||||||||||||| ||| |||| ||||    
T  23335722 atacaattttcataagtgagaacttatgaattaacataaaaacttgtttaattgc 23335776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 8130560 - 8130613
Alignment:
Q  7 tacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||| |  ||||| ||||||||||||||||||||| |||||||||||||    
T  8130560 tacaatttttgttagtgaaaacttatgaattaacataaaaacttatttatttgc 8130613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 39932810 - 39932859
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||| |||||||||||| |||| ||||||||||||||||| ||||    
T  39932810 acataaaagtttatttatttgcataagtttaaaaataagtcaatcgaaac 39932859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 41228983 - 41229044
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||   ||| |||||||||||||||| ||||||||| |||||||||| ||||||    
T  41228983 atacaattttcattagttagaacttatgaattaatataaaagctaatttatttgcataagct 41229044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 18424264 - 18424232
Alignment:
Q  26 aacttatgaattaacataaaagcttatttattt 58  Q
    |||||||||||||||||||||||||||||||||    
T  18424264 aacttatgaattaacataaaagcttatttattt 18424232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 52274176 - 52274228
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacagg 91  Q
    ||||||||| |||||||||||| |||||| ||||||||| |||| ||||||||    
T  52274176 acataaaagtttatttatttgcataagctcaaaaataagccaattcaaacagg 52274228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 15179895 - 15179958
Alignment:
Q  4 aaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||  ||| |||||||||  ||||| |||||||||||||||||| | ||||||    
T  15179895 aaatacaattttcgttagtcagaacttatagattaaaataaaagcttatttatttacataagct 15179958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 31022480 - 31022539
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    ||||||||||||  ||||| ||||||||||||||  |||| |||||||||||||| ||||    
T  31022480 atacaattttcgtcagtgaaaacttatgaattaaggtaaatgcttatttatttgcataag 31022539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 33534008 - 33534055
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatt 53  Q
    ||||||||||||  |||||||||||||||| |||||||||| ||||||    
T  33534008 atacaattttcgttagtgagaacttatgaactaacataaaaacttatt 33534055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 41071444 - 41071491
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||| | ||||||||||||||||||||||||| | ||||||    
T  41071444 agtgagaacttgtaaattaacataaaagcttatttattttcttaagct 41071491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 43136673 - 43136724
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacag 90  Q
    |||||||  |||||||||| || |||||| ||||||||||||||||||||||    
T  43136673 acataaagacttatttattcgcataagctcaaaaataagtcaatccaaacag 43136724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 897050 - 897104
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||| |||||||  ||||| ||||||| |||||| ||||||||||||||||||||    
T  897050 atacgattttcgttagtgaaaacttataaattaatataaaagcttatttatttgc 897104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 2702721 - 2702667
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||||||   ||| ||| |||||||||||||||||||||||| ||||||||    
T  2702721 atacaattttcattagtaagatcttatgaattaacataaaagcttaattatttgc 2702667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 38876105 - 38876067
Alignment:
Q  29 ttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  38876105 ttatgaattaacataaaagtttatttatttgcataagct 38876067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 2548037 - 2547992
Alignment:
Q  22 tgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||| |||||| |||||| ||||||||||||| ||||||    
T  2548037 tgagaacttataaattaatataaaaacttatttatttgcataagct 2547992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 3564306 - 3564347
Alignment:
Q  26 aacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||| |||||||||||||| |||||||||||| ||||||    
T  3564306 aacttataaattaacataaaagattatttatttgcataagct 3564347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 8601281 - 8601342
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| |  ||||| || |||| ||||||||| ||||||||||||||||| ||||||    
T  8601281 atacaatttttgttagtgaaaaattataaattaacattaaagcttatttatttgcataagct 8601342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 19414195 - 19414256
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||||||| ||||| || ||| |||||||||||||||||| | ||||||    
T  19414195 atacaattttcgttagtgagagcttataaagtaaaataaaagcttatttatttacataagct 19414256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 28074444 - 28074505
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  || || ||||| |||| |||||||||| ||||||||||||| ||||||    
T  28074444 atacaattttcgttagcgaaaacttgtgaaataacataaaatcttatttatttgcataagct 28074505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 35405791 - 35405824
Alignment:
Q  34 aattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||||||||||||| ||||||    
T  35405791 aattaacataaaagcttatttatttgcataagct 35405824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 948153 - 948216
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaaca--taaaagcttatttatttgcgtaagct 67  Q
    |||||||||| |  || |||||||||||||||||||  |||||||||||| |||||| ||||||    
T  948153 atacaatttttgtcagagagaacttatgaattaacacataaaagcttattcatttgcataagct 948216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 4603338 - 4603286
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttattt 58  Q
    ||||||||||||  |||||||  |||| |||||| ||||||||||||||||||    
T  4603338 atacaattttcgttagtgagagtttataaattaaaataaaagcttatttattt 4603286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 15184626 - 15184674
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttattt 54  Q
    ||||||||||||  ||||||||||||| |||||| |||||| |||||||    
T  15184626 atacaattttcgttagtgagaacttataaattaaaataaaaacttattt 15184674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 23284797 - 23284745
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttattt 58  Q
    ||||||||||||  ||||||| ||||| |||||| |||||| |||||||||||    
T  23284797 atacaattttcgttagtgagagcttataaattaaaataaaaacttatttattt 23284745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 47202905 - 47202957
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttattt 58  Q
    ||||||||||||  ||||||| ||||| |||||| ||||||||||| ||||||    
T  47202905 atacaattttcgttagtgagatcttataaattaaaataaaagcttacttattt 47202957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 6e-24; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 10874079 - 10874155
Alignment:
Q  21 gtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtcctaa 97  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| |||||    
T  10874079 gtgaaaacttatgaattaacataaaagcttatttatttgcataagctaaaaaataagtcattccaaacaggccctaa 10874155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 14301685 - 14301761
Alignment:
Q  143 aaagaaacttacgaagacggtggttttccacattcaagcccaatcgaagaagcacgaacagcaaccaaaaaagcaag 219  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||    
T  14301685 aaagaaacttacaaagatggtggttttccaccttcaagcccaatcgaagaagcacgaacagcatccaagaaagcaag 14301761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 9201729 - 9201667
Alignment:
Q  4 aaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagc 66  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  9201729 aaatacaatttccgttagtgagaacttatgaattaacataaaagcttatttatttgcataagc 9201667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 35071419 - 35071373
Alignment:
Q  21 gtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  35071419 gtgagaacttatgaattaacataaaagcttatttatttgcataagct 35071373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 3210979 - 3210934
Alignment:
Q  22 tgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  3210979 tgagaacttatgaattaacataaaagcttatttatttgcataagct 3210934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 10755287 - 10755235
Alignment:
Q  8 acaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||||||||    
T  10755287 acaattttcgttagtaagaacttatgaattaacataaaagcttatttatttgc 10755235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 23239341 - 23239388
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  23239341 agtgagaacttatgaattaatataaaagcttatttatttgcataagct 23239388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 7267875 - 7267921
Alignment:
Q  19 aagtgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  7267875 aagtgagaacttacgaattaacataaaagcttatttatttgcataag 7267921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 10755339 - 10755393
Alignment:
Q  42 taaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtccta 96  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  10755339 taaaagcttatttatttgcataagctaaaaaataagccaatccaaacaggcccta 10755393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 30534044 - 30534098
Alignment:
Q  18 aaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaa 72  Q
    ||||||||||||||| |||||| |||||||||||||||||||| |||||| ||||    
T  30534044 aaagtgagaacttataaattaatataaaagcttatttatttgcataagctcaaaa 30534098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 2034235 - 2034174
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||| |||| | ||||||||| | ||||||||||||||||||||||| ||||||    
T  2034235 atacaattttcgtaagtaataacttatgattcaacataaaagcttatttatttgcataagct 2034174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 2255814 - 2255866
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttattt 58  Q
    |||||||||| |  ||||||||| |||||||||||||||||||||||||||||    
T  2255814 atacaatttttggtagtgagaacatatgaattaacataaaagcttatttattt 2255866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 12816908 - 12816853
Alignment:
Q  6 atacaattttcgaaagtgagaactta-tgaattaacataaaagcttatttatttgc 60  Q
    |||| |||||||  |||||||||||| |||||||||||||||||||||||||||||    
T  12816908 ataccattttcgttagtgagaacttaatgaattaacataaaagcttatttatttgc 12816853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 32675895 - 32675836
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    |||||||||||   |||||||||||||||||||| |||||| ||||||||||||| ||||    
T  32675895 atacaattttcattagtgagaacttatgaattaatataaaaacttatttatttgcataag 32675836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 6758707 - 6758769
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacat-aaaagcttatttatttgcgtaagct 67  Q
    |||||| |||||  |||||||||||||||||||| || |||||||||||||||||| ||||||    
T  6758707 atacaaatttcgttagtgagaacttatgaattaatataaaaagcttatttatttgcataagct 6758769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 10687390 - 10687444
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||||  || ||||||||||||| | ||||||||||||||||||||||    
T  10687390 atacaattttcgttagcgagaacttatgaactgacataaaagcttatttatttgc 10687444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 24419501 - 24419563
Alignment:
Q  26 aacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||| ||||||||||| | ||||||||||||| |||| |||||||||||  |||||||||    
T  24419501 aacttataaattaacataataacttatttatttgcataagtttaaaaataagctaatccaaac 24419563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 2034285 - 2034334
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    |||||||||||||||||||||| |||||| ||||| ||| ||||||||||    
T  2034285 acataaaagcttatttatttgcataagctcaaaaacaagccaatccaaac 2034334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 6752892 - 6752953
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||   |||||| | ||||||||||| |||||||||||||||||||| ||||||    
T  6752892 atacaattttcattagtgaggatttatgaattaatataaaagcttatttatttgcataagct 6752953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 9202391 - 9202354
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatt 57  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  9202391 agtgataacttatgaattaacataaaagcttatttatt 9202354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 21025283 - 21025332
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    |||||||||||||||||||||| |||||| |||||| || ||||||||||    
T  21025283 acataaaagcttatttatttgcataagctaaaaaattagccaatccaaac 21025332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 25430758 - 25430681
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtcctaa 97  Q
    |||||||| |||||||||||  |||||| |||||| ||||| ||||||  |||||||| |||||||||| || |||||    
T  25430758 agtgagaaattatgaattaaggtaaaagtttatttctttgcataagctacaaaataagccaatccaaacgggccctaa 25430681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 2027164 - 2027121
Alignment:
Q  24 agaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||    
T  2027164 agaacttatgaattaacataaaagtttatctatttgcataagct 2027121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 12817100 - 12817053
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||| ||| ||| ||||||||||||||||||||||||||| ||||||    
T  12817100 agtgaaaacatataaattaacataaaagcttatttatttgcataagct 12817053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 21891326 - 21891283
Alignment:
Q  24 agaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||||||||||||||||||| ||| || ||||||    
T  21891326 agaacttatgaattaacataaaagcttattcattcgcataagct 21891283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 29623469 - 29623423
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  29623469 agtgagaacttatgaattaacat-aaatcttatttatttgcataagct 29623423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 8011050 - 8010989
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagctt 68  Q
    ||||||||||||  ||| ||| ||||||||| |||||||||||||| |||||||| |||||||    
T  8011050 atacaattttcgttagtaagatcttatgaat-aacataaaagcttaattatttgcataagctt 8010989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 9764397 - 9764343
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||||  | |||  |||||| |||||||||||||||||||||||||||    
T  9764397 atacaattttcgttaatgaacacttataaattaacataaaagcttatttatttgc 9764343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 17915023 - 17915077
Alignment:
Q  4 aaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttattt 58  Q
    ||||||||||||||  ||| |||||||||  ||||| ||||||||||||||||||    
T  17915023 aaatacaattttcgttagtcagaacttatagattaaaataaaagcttatttattt 17915077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 21025197 - 21025164
Alignment:
Q  34 aattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||||||||||||| ||||||    
T  21025197 aattaacataaaagcttatttatttgcataagct 21025164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 32165267 - 32165206
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||||||| ||||| |||||| |||||| ||||||||||| | ||||||    
T  32165267 atacaattttcgttagtgagagcttataaattaaaataaaaacttatttatttacataagct 32165206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 2027233 - 2027281
Alignment:
Q  40 cataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||||||||||||||| ||||||  |||| ||| ||||||||||    
T  2027233 cataaaagcttatttatttgcataagctggaaaacaagccaatccaaac 2027281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 12817228 - 12817276
Alignment:
Q  40 cataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||| ||||||||||  |||||||||||||||| || |||||||    
T  12817228 cataaaagcatatttatttgtataagcttaaaaataagccagtccaaac 12817276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 35111356 - 35111304
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttattt 58  Q
    ||||||||||||  || ||||||||| ||||||| ||||||| ||||||||||    
T  35111356 atacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 35111304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 1e-21; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 13060603 - 13060515
Alignment:
Q  11 attttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtcctaagt 99  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||| | |||| |||||| || | ||||||||||| |||||||    
T  13060603 attttcgttagtgagaacttatgaattaacataaaagcttatttatttgcattagctaaaaaattagcctatccaaacaggccctaagt 13060515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 41419581 - 41419663
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||||||  ||||||||||||| ||||||||||||| ||||||||||| | |||||| |||| |||||||||||||||    
T  41419581 atacaattttcgttagtgagaacttatcaattaacataaaaacttatttattttcataagctcaaaagtaagtcaatccaaac 41419663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 24030294 - 24030355
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24030294 atacaattttcgttagtgagaacttatgaattaacataaaagcttatttatttgcataagct 24030355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 42852099 - 42852162
Alignment:
Q  4 aaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  42852099 aaatacaattttcgttagtgagaacttatgaattaacataaaagcttatttagttgcataagct 42852162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 17657322 - 17657410
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtcct 95  Q
    |||| |||||||  |||||||||||||||||||||||||||| |||||||||||| |||||| || |||||| ||| |||||| ||||||    
T  17657322 atacgattttcgttagtgagaacttatgaattaacataaaaggttatttatttgcataagctaaacaataagccaa-ccaaacgggtcct 17657410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 28625560 - 28625619
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  28625560 atacaattttcgttagtgagaacctatgaattaacataaaagcttatttatttgcataag 28625619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 41059792 - 41059741
Alignment:
Q  9 caattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  41059792 caattttcgttagtgagaacttatgaattaacataaaagcttatttatttgc 41059741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 43268642 - 43268571
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataag 77  Q
    |||||||||| |  ||||||||||||| ||||||||||||||||||||||||| | |||||| |||||||||    
T  43268642 atacaatttttgttagtgagaacttataaattaacataaaagcttatttattttcataagctcaaaaataag 43268571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 28357241 - 28357303
Alignment:
Q  26 aacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||| ||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||    
T  28357241 aacttataaattaacataaaagcttatttatttgcataagctaaaaaataagccaatacaaac 28357303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 5559925 - 5559864
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  |||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  5559925 atacaattttcgttagtgagaatttatgaatttacataaaagcttatttatttgcataagct 5559864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 11163288 - 11163235
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttg 59  Q
    ||||||||||||  |||| |||||||||||||||||||||||||||||||||||    
T  11163288 atacaattttcgttagtgcgaacttatgaattaacataaaagcttatttatttg 11163235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 1943075 - 1943135
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagc 66  Q
    |||||||||||   ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  1943075 atacaattttcattagtgagaacttatgaattagcataaaagcttatttatttgcataagc 1943135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 7364301 - 7364249
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaa 72  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  7364301 agtgagaacttatgaattaatataaaagcttatttatttgcataagctcaaaa 7364249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 35083333 - 35083373
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35083333 agtgagaacttatgaattaacataaaagcttatttatttgc 35083373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 3977567 - 3977614
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  3977567 agtgagaacgtatgaattaacataaaagcttatttatttgcataagct 3977614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 10537233 - 10537171
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacat-aaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||| ||||||| ||||||    
T  10537233 atacaattttcgttagtgagaacttatgaattaacataaaaagcttatatatttgcataagct 10537171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 11912108 - 11912054
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||||| |  ||||||||||||||||||||||| |||||||||||||||||    
T  11912108 atacaatttttgttagtgagaacttatgaattaacatgaaagcttatttatttgc 11912054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 28625507 - 28625461
Alignment:
Q  42 taaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  28625507 taaaagcttatttatttgcataagctaaaaaataagtcaatccaaac 28625461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 41534653 - 41534591
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtcctaagtgt 101  Q
    |||||||||||||||||||||| ||| || ||||||||| ||||||||||||  |||||||||    
T  41534653 acataaaagcttatttatttgcataatctgaaaaataagccaatccaaacagtccctaagtgt 41534591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 14243902 - 14243959
Alignment:
Q  4 aaatacaatttt-cgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||||||| |||||||||||||||||||||||||  |||| |||||||||||||    
T  14243902 aaatacaatttttcgaaagtgagaacttatgaattaactgaaaaacttatttatttgc 14243959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 39154751 - 39154706
Alignment:
Q  22 tgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||    
T  39154751 tgagaacttatgaattaacacaaaagcttatttatttgcataagct 39154706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 12987006 - 12986924
Alignment:
Q  20 agtgagaacttatgaatta---acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtcctaagt 99  Q
    |||||||||||||||||||   |||||||||||||||||||||| | |||| |||||| || | |||||||| || |||||||    
T  12987006 agtgagaacttatgaattattaacataaaagcttatttatttgcattagctaaaaaattagcctatccaaacgggccctaagt 12986924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 29659141 - 29659201
Alignment:
Q  7 tacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||   |||||||||||||||||||| |||||| ||||||||||||| ||||||    
T  29659141 tacaattttcattagtgagaacttatgaattaagataaaaacttatttatttgcataagct 29659201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 41125768 - 41125808
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  41125768 agtgagaacttatgaattaacataaaagcttatatatttgc 41125808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 3520495 - 3520452
Alignment:
Q  24 agaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||| ||||| |||||||||||||||||||||||||||||    
T  3520495 agaacttaagaatttacataaaagcttatttatttgcgtaagct 3520452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 6125380 - 6125427
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  6125380 agtgagaaattatgaattaatataaaagcttatttatttgcataagct 6125427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 29136817 - 29136778
Alignment:
Q  21 gtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  29136817 gtgaggacttatgaattaacataaaagcttatttatttgc 29136778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 29922181 - 29922134
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||| |||||||||||| |||||||||||||||||||| ||||||    
T  29922181 agtgagagcttatgaattaatataaaagcttatttatttgcataagct 29922134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 40452469 - 40452422
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||| ||||||| ||||||||||||||| ||||||    
T  40452469 agtgagaacttatgaataaacataatagcttatttatttgcataagct 40452422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 7984185 - 7984258
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaa 86  Q
    |||||||||||  |||||||||||||||||||||||       |||||||||| | |||||| ||||||||||||||||||    
T  7984185 atacaattttcataagtgagaacttatgaattaaca-------ttatttatttacataagctaaaaaataagtcaatccaa 7984258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 15167722 - 15167668
Alignment:
Q  4 aaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttattt 58  Q
    ||||||||||||||  | |||||| ||||||||||||||||||||| ||||||||    
T  15167722 aaatacaattttcgttaatgagaatttatgaattaacataaaagctaatttattt 15167668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 28357435 - 28357493
Alignment:
Q  9 caattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||  |||||||||||| ||||||| |||||| ||||||||||||| ||||||    
T  28357435 caattttcgttagtgagaacttacgaattaagataaaaacttatttatttgcataagct 28357493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 42706823 - 42706777
Alignment:
Q  42 taaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  42706823 taaaagcttatttatttgcataagctcaaaaataagccaatccaaac 42706777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 6144766 - 6144709
Alignment:
Q  41 ataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtcctaag 98  Q
    |||||||||||||||||| | | |||| ||||||||||||||| ||||||| ||||||    
T  6144766 ataaaagcttatttatttacatgagctcaaaaataagtcaatctaaacaggacctaag 6144709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 9477417 - 9477470
Alignment:
Q  7 tacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||||||  | |||||||||||||||||| |||||| |||||||||||||    
T  9477417 tacaattttcgttactgagaacttatgaattaagataaaaacttatttatttgc 9477470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 11991384 - 11991437
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttg 59  Q
    ||||||||||||  |||||||  |||| ||||||||||||||||||||||||||    
T  11991384 atacaattttcgttagtgagagtttataaattaacataaaagcttatttatttg 11991437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 15364103 - 15364140
Alignment:
Q  28 cttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  15364103 cttatgaattaacataaaagcttatttatttgcataag 15364140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 27805995 - 27806056
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| |  ||||| ||||||| |||||||||||||| |||||||||||| ||||||    
T  27805995 atacaatttttgttagtgaaaacttataaattaacataaaagtttatttatttgcataagct 27806056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 29658047 - 29658002
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  29658047 agtgagaacttataaattaacataaaagcttatttttttgcataag 29658002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 35536925 - 35536985
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  | ||||||||||||||| || |||||||||||||||||||| ||||||    
T  35536925 atacaattttcgttactgagaacttatgaat-aatataaaagcttatttatttgcataagct 35536985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 40697031 - 40696982
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    |||||||| ||||||||||||| |||||| |||||||||||||| |||||    
T  40697031 acataaaaacttatttatttgcataagctcaaaaataagtcaattcaaac 40696982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 40697106 - 40697139
Alignment:
Q  26 aacttatgaattaacataaaagcttatttatttg 59  Q
    ||||||||||||||||||||||||||||||||||    
T  40697106 aacttatgaattaacataaaagcttatttatttg 40697139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 43265938 - 43265877
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||| |||||| ||||||  || |||||||||||||||||||||| | ||||||    
T  43265938 atacaattttcgtaagtgacaacttacaaaataacataaaagcttatttatttccttaagct 43265877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 2577437 - 2577373
Alignment:
Q  4 aaatacaatttt-cgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||| ||  ||||||||||||||||||||||||| |  |||||||||||| ||||||    
T  2577437 aaatacaatttttcgttagtgagaacttatgaattaacataacaatttatttatttgcataagct 2577373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 40152866 - 40152823
Alignment:
Q  22 tgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    |||||||||||||||||| ||||||| |||||||||||| ||||    
T  40152866 tgagaacttatgaattaatataaaagattatttatttgcataag 40152823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 42706897 - 42706964
Alignment:
Q  18 aaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatcca 85  Q
    ||||||| ||||||||||||||||| ||| ||||||||||| | ||||||   ||||||||| |||||    
T  42706897 aaagtgaaaacttatgaattaacattaaaacttatttattttcataagctcgtaaataagtcgatcca 42706964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 3520589 - 3520627
Alignment:
Q  56 tttgcgtaagcttaaaaataagtcaatccaaacaggtcc 94  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  3520589 tttgcataagctaaaaaataagtcaatccaaacaggtcc 3520627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 6144818 - 6144872
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||||| |  || ||||||||||||||||| |||||||||| |||||||||    
T  6144818 atacaatttttgttagcgagaacttatgaattaatataaaagcttgtttatttgc 6144872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 7364159 - 7364121
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttattt 58  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  7364159 agtgagaagttatgaattaacataaaagcttaattattt 7364121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 12467359 - 12467407
Alignment:
Q  20 agtgagaacttatgaatta---acataaaagcttatttatttgcgtaag 65  Q
    |||||||||||||||||||   |||||||||||||||||||||| ||||    
T  12467359 agtgagaacttatgaattactaacataaaagcttatttatttgcataag 12467407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 1576710 - 1576771
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| |  |||||||||||| ||||||||||||||   ||||||||||| ||||||    
T  1576710 atacaatttttgttagtgagaacttaagaattaacataaaactgtatttatttgcataagct 1576771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 1608105 - 1608044
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| |  |||||||||||| ||||||||||||||   ||||||||||| ||||||    
T  1608105 atacaatttttgttagtgagaacttaagaattaacataaaactgtatttatttgcataagct 1608044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 2878683 - 2878622
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| |  ||||| ||||| | ||||||||||||||||||||||||| | ||||||    
T  2878683 atacaatttttgttagtgaaaacttttaaattaacataaaagcttatttatttacataagct 2878622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 58
Target Start/End: Complemental strand, 9251741 - 9251712
Alignment:
Q  29 ttatgaattaacataaaagcttatttattt 58  Q
    ||||||||||||||||||||||||||||||    
T  9251741 ttatgaattaacataaaagcttatttattt 9251712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 13625522 - 13625465
Alignment:
Q  10 aattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||  ||||| ||||||| |||||| ||||||| |||||||||||| ||||||    
T  13625522 aattttcgttagtgaaaacttataaattaatataaaagtttatttatttgcataagct 13625465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 15414072 - 15414133
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| |  ||| ||| |||||||||||||||||||||||| ||||| || ||||||    
T  15414072 atacaatttttgttagtaagatcttatgaattaacataaaagcttaattattcgcataagct 15414133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 17868190 - 17868149
Alignment:
Q  26 aacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||| |||||||||||||| |||||||||||| ||||||    
T  17868190 aacttatcaattaacataaaaggttatttatttgcataagct 17868149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 29418757 - 29418704
Alignment:
Q  7 tacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||||||  |||||||| |||| |||||| |||||| |||||||||||||    
T  29418757 tacaattttcgttagtgagaatttataaattaagataaaaacttatttatttgc 29418704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 35536872 - 35536823
Alignment:
Q  39 acataaaagcttatttatttgcgtaagct-taaaaataagtcaatccaaa 87  Q
    |||||||||||||| ||||||| ||||||  |||||||||||||||||||    
T  35536872 acataaaagcttatgtatttgcataagctaaaaaaataagtcaatccaaa 35536823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 43319087 - 43319132
Alignment:
Q  10 aattttcgaaagtgagaacttatgaattaacataaaagcttattta 55  Q
    ||||||||  |||||||||||||||||||| |||||| ||||||||    
T  43319087 aattttcgttagtgagaacttatgaattaagataaaaacttattta 43319132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 589246 - 589294
Alignment:
Q  20 agtgagaacttatgaattaacat-aaaagcttatttatttgcgtaagct 67  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| ||||||    
T  589246 agtgaaaacttatgaattaacataaaaaacttatttatttgcataagct 589294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 3432790 - 3432727
Alignment:
Q  24 agaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||| ||||||||| |||||| |||||||||| | ||| || |||||||| |||||||||||    
T  3432790 agaacttgtgaattaacttaaaagtttatttattt-cataaactcaaaaataaatcaatccaaac 3432727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 3715018 - 3714978
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||| ||| |||||| ||||||||||||||||||||    
T  3715018 agtgagaacatataaattaatataaaagcttatttatttgc 3714978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 12298925 - 12298977
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttattt 58  Q
    ||||||||||||| | | ||||||||||| |||||||||||  ||||||||||    
T  12298925 atacaattttcgataataagaacttatgatttaacataaaaatttatttattt 12298977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 13739332 - 13739368
Alignment:
Q  29 ttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  13739332 ttatgaattatcataaaagcttatttatttgcataag 13739368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 36106721 - 36106689
Alignment:
Q  26 aacttatgaattaacataaaagcttatttattt 58  Q
    |||||||||||||||||||||| ||||||||||    
T  36106721 aacttatgaattaacataaaagattatttattt 36106689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 1e-18; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 46744033 - 46744112
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatcca 85  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||||||||| | ||||||  |||||||||| |||||    
T  46744033 atacaattttcgttagtgagaacttacgaattaacataaaagcttatttattttcataagctataaaataagtcgatcca 46744112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 33204915 - 33204973
Alignment:
Q  7 tacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    ||||||| |||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  33204915 tacaattatcgttagtgagaacttatgaattaacataaaagcttatttatttgcataag 33204973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 29378725 - 29378786
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||| ||||||||||||||||| ||||||||||||||||||| ||||||    
T  29378725 atacaattttcgttagtaagaacttatgaattaacgtaaaagcttatttatttgcataagct 29378786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 34923013 - 34923074
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||| ||||||  |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  34923013 atacacttttcgttagtgagaacttatgaactaacataaaagcttatttatttgcataagct 34923074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 29378675 - 29378619
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtcct 95  Q
    |||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||||    
T  29378675 acataaaagcttatttatttgcataagctcaaagataagccaatccaaacaggtcct 29378619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 38372640 - 38372692
Alignment:
Q  8 acaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||  |||||||||||||||||||||||||||||| ||||||||||    
T  38372640 acaattttcgttagtgagaacttatgaattaacataaaagctgatttatttgc 38372692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 47511073 - 47511022
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacag 90  Q
    |||||||||||||||||||||| |||||| ||||||||| ||||||||||||    
T  47511073 acataaaagcttatttatttgcataagctcaaaaataagccaatccaaacag 47511022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 1401153 - 1401207
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||| |||| | |||| |||||||||||||||||||||||||||||||||||||    
T  1401153 atacactttttgtaagtaagaacttatgaattaacataaaagcttatttatttgc 1401207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 14691301 - 14691251
Alignment:
Q  10 aattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||  |||||||||||||||||||||||||||| ||||||||||||    
T  14691301 aattttcgttagtgagaacttatgaattaacataaaaggttatttatttgc 14691251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 47654419 - 47654361
Alignment:
Q  7 tacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    |||||||||||  |||||||||||||||||||| |||||| ||||||||||||| ||||    
T  47654419 tacaattttcgttagtgagaacttatgaattaagataaaaacttatttatttgcataag 47654361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 22032843 - 22032904
Alignment:
Q  7 tacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagctt 68  Q
    |||||||||||  ||||||||||||| |||||| |||||| ||||||||||||| |||||||    
T  22032843 tacaattttcgttagtgagaacttataaattaagataaaaacttatttatttgcataagctt 22032904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 30181644 - 30181684
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  30181644 agtgggaacttatgaattaacataaaagcttatttatttgc 30181684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 37465875 - 37465831
Alignment:
Q  23 gagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||    
T  37465875 gagaacttatgaattaatataaaagcttatttatttgcataagct 37465831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 43818883 - 43818823
Alignment:
Q  7 tacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||   |||||||||||||||||||| |||||| ||||||||||||| ||||||    
T  43818883 tacaattttcattagtgagaacttatgaattaagataaaaacttatttatttgcataagct 43818823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 35713612 - 35713561
Alignment:
Q  40 cataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacagg 91  Q
    |||||||| |||||||||||| ||||||||| |||||| |||||||||||||    
T  35713612 cataaaaggttatttatttgcataagcttaagaataagccaatccaaacagg 35713561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 44613461 - 44613418
Alignment:
Q  24 agaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||||| |||||||||||||||||||| ||||||    
T  44613461 agaacttatgaattaatataaaagcttatttatttgcataagct 44613418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 26331868 - 26331906
Alignment:
Q  29 ttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  26331868 ttatgaattaacataaaagcttatttatttgcataagct 26331906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 29390557 - 29390503
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||||  ||  |||| ||||||||||||||||||||||||||||||||    
T  29390557 atacaattttcgttagctagaatttatgaattaacataaaagcttatttatttgc 29390503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 30094720 - 30094674
Alignment:
Q  21 gtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||| |||||||||||| |||||||||||||||||||| ||||||    
T  30094720 gtgagatcttatgaattaagataaaagcttatttatttgcataagct 30094674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 39279509 - 39279563
Alignment:
Q  6 atacaattttcga-aagtgagaacttatgaattaacataaaagcttatttatttg 59  Q
    ||||||||||||  || ||||||| ||||||||||||||||||||||||||||||    
T  39279509 atacaattttcgttaattgagaacctatgaattaacataaaagcttatttatttg 39279563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 33288081 - 33288028
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttg 59  Q
    ||||| ||||||  ||||| ||||||||||||||||||||| ||||||||||||    
T  33288081 atacagttttcgttagtgaaaacttatgaattaacataaaaacttatttatttg 33288028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 1400980 - 1400940
Alignment:
Q  62 taagcttaaaaataagtcaatccaaacaggtcctaagtgta 102  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  1400980 taagcttaaaaataagtcaatccaaccaggtccttagtgta 1400940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 23356483 - 23356447
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttat 56  Q
    ||||||||| |||||||||||||||||||||||||||    
T  23356483 agtgagaacctatgaattaacataaaagcttatttat 23356447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 32358703 - 32358743
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  32358703 agtgagaacttataaattaacataaaagcttatttacttgc 32358743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 33288155 - 33288199
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatc 83  Q
    |||||||||||||||||||||| |||||| ||||||| |||||||    
T  33288155 acataaaagcttatttatttgcataagctcaaaaatatgtcaatc 33288199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 17944555 - 17944509
Alignment:
Q  41 ataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaa 87  Q
    |||||||||||||||||||| |||||| |||||| || |||||||||    
T  17944555 ataaaagcttatttatttgcataagctcaaaaattagccaatccaaa 17944509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 1054124 - 1054173
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    |||||||||||||||||||||| |||||| |||| ||||| ||| |||||    
T  1054124 acataaaagcttatttatttgcataagctcaaaactaagtgaatacaaac 1054173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 8180583 - 8180538
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    ||||| |||||||||||||| ||||||| |||||||||||| ||||    
T  8180583 agtgaaaacttatgaattaatataaaagtttatttatttgcataag 8180538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 35809170 - 35809231
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||| |||  ||||||||||||||||||||||| |||||| | ||||||    
T  35809170 atacaattttcgccagtaagattttatgaattaacataaaagcttaattatttacataagct 35809231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 12473435 - 12473499
Alignment:
Q  8 acaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaa 72  Q
    ||||||||||   |||||||||||| |||||| ||| |||||||||||||||  |||||| ||||    
T  12473435 acaattttcgtttgtgagaacttataaattaatatataagcttatttatttgaataagctcaaaa 12473499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 25908374 - 25908434
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagc 66  Q
    ||||||||||||   |||| || |||| ||||||||||||| ||||||||||||| |||||    
T  25908374 atacaattttcgtttgtgaaaagttataaattaacataaaaacttatttatttgcataagc 25908434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 28759825 - 28759777
Alignment:
Q  24 agaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaa 72  Q
    |||||||||||||| | |||||||||||||| ||||| |||||| ||||    
T  28759825 agaacttatgaattgatataaaagcttatttgtttgcataagctcaaaa 28759777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 29778500 - 29778424
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtccta 96  Q
    ||||| || |||| || ||| ||||||  |||||||||||| |||||| |||||||||||||| |||| || |||||    
T  29778500 agtgaaaatttataaactaatataaaaatttatttatttgcataagctaaaaaataagtcaattcaaatagatccta 29778424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 35246749 - 35246801
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttattt 58  Q
    ||||||||||||  ||||||  ||||| |||||| ||||||||||||||||||    
T  35246749 atacaattttcgttagtgagggcttataaattaaaataaaagcttatttattt 35246801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 46743980 - 46743928
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacagg 91  Q
    |||||||| ||||||||||||| | |||| |||| |||| |||||||||||||    
T  46743980 acataaaatcttatttatttgcatgagctcaaaagtaagccaatccaaacagg 46743928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 49104360 - 49104320
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||| ||||||||||||||||||  ||||||||||||    
T  49104360 agtgagaatttatgaattaacataaaaatttatttatttgc 49104320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 9131023 - 9130941
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||||||  |||  ||||||||||||||||||||||| |||||||||||| |||||| ||||  ||||||||||||||    
T  9131023 atacaattttcgttagtcggaacttatgaattaacataaaagtttatttatttgcataagctcaaaatcaagtcaatccaaac 9130941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 32131520 - 32131574
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  32131520 atacaattttcaatagtgagaacttatgaattaacataaaagcttatctatttgc 32131574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 25333707 - 25333646
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  25333707 atacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttacataagct 25333646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 31079171 - 31079111
Alignment:
Q  7 tacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||| ||||| |||||||||||||| |||||| ||||||||||||| ||||||    
T  31079171 tacaattttcgatagtgaaaacttatgaattaagataaaaacttatttatttgcataagct 31079111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 32213078 - 32213122
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatc 83  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  32213078 acataaaagcttatttatttgcataagcttaaaaataagtcaatc 32213122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 34286619 - 34286671
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacagg 91  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||||||||    
T  34286619 acataaaagcttatttatttacataagctcaaaaataagtcaatccaaacagg 34286671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 35168426 - 35168362
Alignment:
Q  24 agaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||||||||||| |||||||| |||||||| | |||||| ||||||||| ||||||||||    
T  35168426 agaacttatgaattaacttaaaagctgatttatttacataagctcaaaaataagccaatccaaac 35168362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 35286025 - 35286093
Alignment:
Q  23 gagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacagg 91  Q
    |||||||||||||||||| | ||||||||||||||||  |||||| ||||||||| ||||| |||||||    
T  35286025 gagaacttatgaattaacgtgaaagcttatttatttgtataagctaaaaaataagccaatctaaacagg 35286093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2019651 - 2019592
Alignment:
Q  1 atgaaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||| ||||||||  | |||||| ||||||||||||||||||||||||||||||||    
T  2019651 atgaaatataattttcgtcaatgagaatttatgaattaacataaaagcttatttatttgc 2019592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 10213789 - 10213836
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||    
T  10213789 agtgagaacttatgaattaacatacaagcttatttatttgcataagct 10213836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 28879153 - 28879196
Alignment:
Q  24 agaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  28879153 agaacttatgaattaacataaaagcttatttatttgcataagct 28879196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 32975782 - 32975828
Alignment:
Q  21 gtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||    
T  32975782 gtgagaacttatgaattaatataaaagcttatttatttgcataagct 32975828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 34286570 - 34286516
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||||  || ||||||||||||||||| ||||||||||||||||||||    
T  34286570 atacaattttcgttagggagaacttatgaattaatataaaagcttatttatttgc 34286516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 8752901 - 8752938
Alignment:
Q  21 gtgagaacttatgaattaacataaaagcttatttattt 58  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8752901 gtgagaacttatgaattaacataaaagcttatttattt 8752938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 9131134 - 9131073
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  |||  ||||||||||||||||||||||| |||||||||||| ||||||    
T  9131134 atacaattttcgttagtcggaacttatgaattaacataaaagtttatttatttgcataagct 9131073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 24350521 - 24350464
Alignment:
Q  10 aattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||  ||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  24350521 aattttcgttagtaagaacttatgaattaacataaaatcttatttatttgcataagct 24350464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 25465833 - 25465792
Alignment:
Q  26 aacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  25465833 aacttatgaattaacataaaagcttatttatttgcataagct 25465792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 36907650 - 36907589
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||| ||| ||||||||||| ||||||||||||||||||||| ||||||    
T  36907650 atacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagct 36907589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 30974070 - 30974130
Alignment:
Q  7 tacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||  ||| ||| ||||||||||| ||||||||||||||||||||| ||||||    
T  30974070 tacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagct 30974130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 28280803 - 28280850
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||||||||| |||||| ||||||||||||| ||||||    
T  28280803 agtgagaacttatgaattaagataaaaacttatttatttgcataagct 28280850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 32213007 - 32212960
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||| || |||||||||||||||||||||||| ||||||    
T  32213007 agtgagaacttataaaataacataaaagcttatttatttgcataagct 32212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 35453454 - 35453392
Alignment:
Q  26 aacttatgaatta-acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaa 87  Q
    ||||||||||| | |||||||||||||||||||||| |||||| ||||||||| |||| ||||    
T  35453454 aacttatgaataatacataaaagcttatttatttgcataagctaaaaaataagccaattcaaa 35453392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 10480063 - 10480112
Alignment:
Q  46 agcttatttatttgcgtaagcttaaaa-ataagtcaatccaaacaggtcc 94  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||||||||    
T  10480063 agcttatttatttgcataagctaaaaaaataagtcaatccaaacaggtcc 10480112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 16972362 - 16972301
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||||| ||||||||||| || ||||||| |||||||||||| ||||||    
T  16972362 atacaattttcgttagtgataacttatgaatcaatataaaagtttatttatttgcataagct 16972301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 28879088 - 28879039
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    |||||||||||||||||||||| |||||| ||||||||| |||| |||||    
T  28879088 acataaaagcttatttatttgcataagctcaaaaataagccaattcaaac 28879039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 35055502 - 35055562
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||||||| |||||||||||| |||||||||||||||||| | ||||||    
T  35055502 atacaattttcgttagtgagagcttatgaattaa-ataaaagcttatttatttacataagct 35055562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 10213755 - 10213707
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaa 87  Q
    |||||||| ||||||||||||| |||||||| ||||||| |||||||||    
T  10213755 acataaaaacttatttatttgcataagcttagaaataagccaatccaaa 10213707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 16926720 - 16926680
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  16926720 agtgagaacttataaattaacataaaaacttatttatttgc 16926680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 18396965 - 18396917
Alignment:
Q  40 cataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||||| ||||||||| |||||| ||||||||| ||||||||||    
T  18396965 cataaaagcttttttatttgcataagctcaaaaataagccaatccaaac 18396917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 2669750 - 2669789
Alignment:
Q  28 cttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  2669750 cttatgaattaacataaaagcttatttattttcataagct 2669789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 90
Target Start/End: Complemental strand, 9781237 - 9781194
Alignment:
Q  47 gcttatttatttgcgtaagcttaaaaataagtcaatccaaacag 90  Q
    |||||||||||||| ||||||  |||||||||||||||||||||    
T  9781237 gcttatttatttgcataagctctaaaataagtcaatccaaacag 9781194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 13265514 - 13265463
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacag 90  Q
    |||||||||||||||||||||| ||| ||  |||| ||||||||||||||||    
T  13265514 acataaaagcttatttatttgcataaactcgaaaacaagtcaatccaaacag 13265463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 25671882 - 25671835
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||| ||||||| ||||||||||||||||||||||||| | ||||||    
T  25671882 agtgaaaacttataaattaacataaaagcttatttatttacataagct 25671835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 32924205 - 32924167
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttattt 58  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  32924205 agtgaaaacttatgaattaatataaaagcttatttattt 32924167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 10298916 - 10298872
Alignment:
Q  22 tgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||    
T  10298916 tgagaacttatgaattaacataaaagc-tatctatttgcataagct 10298872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 12607159 - 12607220
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||| ||  ||||||| ||||| |||||| |||||||||||||||||| | ||||||    
T  12607159 atacaatttccgttagtgagagcttataaattaaaataaaagcttatttatttacataagct 12607220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 14724953 - 14724912
Alignment:
Q  24 agaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    |||||||||||||||| |||||| ||||||||||||| ||||    
T  14724953 agaacttatgaattaagataaaaacttatttatttgcataag 14724912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 19925395 - 19925342
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttg 59  Q
    ||||||||||||  ||| |||  ||||||||||||||||||||||| |||||||    
T  19925395 atacaattttcgttagtaagatattatgaattaacataaaagcttaattatttg 19925342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 24087271 - 24087312
Alignment:
Q  26 aacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||| |||||| |||||||||||||||||||| ||||||    
T  24087271 aacttataaattaaaataaaagcttatttatttgcataagct 24087312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 34338389 - 34338328
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||| | |||||||  |||||||||||||||||||| ||||| ||||||    
T  34338389 atacaattttcgttagttaaaacttatagattaacataaaagcttatttttttgcataagct 34338328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 42363323 - 42363262
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| |  ||||||||||| | |||||| |||||||||||||||||| | ||||||    
T  42363323 atacaatttttgttagtgagaacttttaaattaaaataaaagcttatttatttacataagct 42363262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 8752832 - 8752784
Alignment:
Q  43 aaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacagg 91  Q
    |||||||||||| ||||| |||  | |||||||||||||||||||||||    
T  8752832 aaaagcttatttctttgcataaattaaaaaataagtcaatccaaacagg 8752784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 11460775 - 11460727
Alignment:
Q  40 cataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||||| ||||||||| |||| | |||||||||| |||||||||    
T  11460775 cataaaagcttttttatttgcataagatcaaaaataagtgaatccaaac 11460727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 11461240 - 11461288
Alignment:
Q  40 cataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||||| ||||||||| |||| | ||||||||| ||||||||||    
T  11461240 cataaaagcttttttatttgcataaggtcaaaaataagccaatccaaac 11461288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 11988276 - 11988328
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttattt 58  Q
    ||||||||||||  ||||||| ||||| |||||| |||||||| |||||||||    
T  11988276 atacaattttcgttagtgagagcttataaattaaaataaaagcatatttattt 11988328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 14942522 - 14942558
Alignment:
Q  24 agaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  14942522 agaacttataaattaacataaaaccttatttatttgc 14942558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 16706089 - 16706045
Alignment:
Q  23 gagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||| |||| ||||||||||||||| ||||||||||| ||||||    
T  16706089 gagaatttataaattaacataaaagcgtatttatttgcataagct 16706045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 24866956 - 24866896
Alignment:
Q  7 tacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||  |  |||||||||| |||||| |||||| ||||||||||||| ||||||    
T  24866956 tacaattttcgttatcgagaacttataaattaagataaaaacttatttatttgcataagct 24866896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 38338852 - 38338796
Alignment:
Q  11 attttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||  ||||||||||||| |||||| |||||| ||||||||||| | ||||||    
T  38338852 attttcgttagtgagaacttataaattaaaataaaaacttatttatttacataagct 38338796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 41145388 - 41145348
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||||||||||||||| ||| || |||||||||||||    
T  41145388 agtgagaacttatgaattaatatataaacttatttatttgc 41145348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 8832537 - 8832598
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  8832537 atacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttgcataagct 8832598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 38216099 - 38216160
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  38216099 atacaattttcgttagtgagaacttatgagttaacataaaagcttatttatttgcataagct 38216160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 5516154 - 5516250
Alignment:
Q  4 aaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtcctaagtg 100  Q
    ||||||||||||||  ||||||| ||||| |||||||| |||||||||||||||||| |||||| ||||  ||   |||||||||||| ||||||||    
T  5516154 aaatacaattttcgttagtgagagcttataaattaacacaaaagcttatttatttgcataagctcaaaataaacctaatccaaacaggccctaagtg 5516250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 29774823 - 29774879
Alignment:
Q  4 aaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||    
T  29774823 aaatacaattttcgttagtgagaacttatgaattaacgtaaaagcttatttatttgc 29774879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 4027005 - 4027066
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| |  ||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  4027005 atacaatttttgttagtgagaacttatgaattaacataatagcttatttatttgcataagct 4027066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 36501507 - 36501460
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  36501507 agtgagaactcatgaattaacataaaagcttatttatttgcataagct 36501460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 9140708 - 9140654
Alignment:
Q  34 aattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    |||||||||||||| |||||||| ||| |||||| ||||||||||||||||||||    
T  9140708 aattaacataaaagtttatttatatgcataagctcaaaaataagtcaatccaaac 9140654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 23956270 - 23956208
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagctt 68  Q
    ||||||||||||  | ||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  23956270 atacaattttcgttaatgagaacttataaattaacataaaaacttatttatttgcataagctt 23956208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 42064936 - 42064997
Alignment:
Q  11 attttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaa 72  Q
    |||||||  ||| |||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  42064936 attttcgttagtaagaacttatgaattaatataaaagcttatttatttgcataagctcaaaa 42064997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 37419947 - 37419899
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaa 87  Q
    |||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  37419947 acataaaagcttatttatttgcataagctcaaaattaagtcaatccaaa 37419899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 887510 - 887553
Alignment:
Q  24 agaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||    
T  887510 agaacttatgaattaacataaaagcttatctatttgcataagct 887553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 1120379 - 1120426
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| ||||||||||||||||| |||||||||||| ||||||    
T  1120379 agtgagaactcatgaattaacataaaagattatttatttgcataagct 1120426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 17317226 - 17317160
Alignment:
Q  24 agaacttatgaattaacataaaa--gcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||| ||| |||||||||  |||||||||||| | |||||| ||||||||||||||||||||    
T  17317226 agaacttatcaataaacataaaaaagcttatttatttacataagctcaaaaataagtcaatccaaac 17317160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 21788541 - 21788596
Alignment:
Q  10 aattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    ||||||||  ||||||| |||||||||||| |||||||||||||||||||| ||||    
T  21788541 aattttcgttagtgagagcttatgaattaatataaaagcttatttatttgcataag 21788596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 7480905 - 7480851
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||||||   ||| ||||||||||||||||||||||| |||||||||||||    
T  7480905 atacaattttcattagtcagaacttatgaattaacataaaaacttatttatttgc 7480851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 4533402 - 4533463
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| |  ||||| ||||||||||||| |||| |||||||||||||||| ||||||    
T  4533402 atacaatttttgttagtgacaacttatgaattagcatagaagcttatttatttgcataagct 4533463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 5903634 - 5903679
Alignment:
Q  22 tgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| |||| ||||||||||||||||||||||| ||||||    
T  5903634 tgagaacttaagaataaacataaaagcttatttatttgcataagct 5903679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 25836704 - 25836660
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  25836704 agtgagaacttatgaat-aacataaaagcttatttatttgcataag 25836660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 35235200 - 35235237
Alignment:
Q  21 gtgagaacttatgaattaacataaaagcttatttattt 58  Q
    |||||||||||||||||||||||||| |||||||||||    
T  35235200 gtgagaacttatgaattaacataaaatcttatttattt 35235237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 755700 - 755656
Alignment:
Q  23 gagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||||    
T  755700 gagaactaatgaattaacataaaagcttctttatttgcataagct 755656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 4004900 - 4004960
Alignment:
Q  7 tacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||  |||||||||||||||||||  |||||||||| ||||| ||| ||||||    
T  4004900 tacaattttcgttagtgagaacttatgaattactataaaagcttttttatctgcataagct 4004960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 4090569 - 4090640
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataag 77  Q
    ||||||||||||  |  ||||||||||||||||||| || | ||||||||||||| ||||||  ||||||||    
T  4090569 atacaattttcgttaccgagaacttatgaattaacacaacaacttatttatttgcataagctggaaaataag 4090640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 60
Target Start/End: Original strand, 37420009 - 37420040
Alignment:
Q  29 ttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||||||||||||||||||||||||    
T  37420009 ttatgaattaacataaaagcttatttatttgc 37420040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 44475525 - 44475474
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatt 57  Q
    |||||||||||   |||||||||||| |||||||||||||| ||||||||||    
T  44475525 atacaattttcattagtgagaacttacgaattaacataaaaacttatttatt 44475474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 45163944 - 45163991
Alignment:
Q  41 ataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    |||||||||||||| ||||| |||||| |||||||| |||||||||||    
T  45163944 ataaaagcttatttgtttgcataagctaaaaaataactcaatccaaac 45163991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 12950117 - 12950067
Alignment:
Q  10 aattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||  ||| ||| |||||||||||||||||||||||| ||||||||    
T  12950117 aattttcgttagtaagatcttatgaattaacataaaagcttaattatttgc 12950067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 42839324 - 42839266
Alignment:
Q  9 caattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||  || || ||||||| |||||||||||||||||||||| |||| ||||||    
T  42839324 caattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 42839266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 1768833 - 1768772
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  | | ||||||||| ||||||| ||||| ||||||||||||| ||||||    
T  1768833 atacaattttcgttactcagaacttataaattaacctaaaaacttatttatttgcataagct 1768772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 15155909 - 15155954
Alignment:
Q  22 tgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||||||| |||||| ||||||||||| | ||||||    
T  15155909 tgagaacttatgaattaagataaaaacttatttattttcataagct 15155954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 33321318 - 33321257
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| |  ||||||| ||| |||||||||||||| | |||||||||||| ||||||    
T  33321318 atacaatttttgttagtgagagcttgtgaattaacataaaggtttatttatttgcataagct 33321257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 446507 - 446559
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttattt 58  Q
    ||||||||||||  ||||||| ||||| |||||| ||||||||||| ||||||    
T  446507 atacaattttcgttagtgagagcttataaattaaaataaaagcttacttattt 446559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 11777078 - 11777118
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||||| || |||||||||| |||||||||||||    
T  11777078 agtgagaacttataaactaacataaaaccttatttatttgc 11777118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 12238492 - 12238440
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttattt 58  Q
    ||||||||||||  ||| ||| |||||||||||||||||| ||||| ||||||    
T  12238492 atacaattttcgttagtaagatcttatgaattaacataaatgcttaattattt 12238440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 13056316 - 13056280
Alignment:
Q  23 gagaacttatgaattaacataaaagcttatttatttg 59  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  13056316 gagaacttatgaattaacattaaagcttatctatttg 13056280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 38471796 - 38471744
Alignment:
Q  7 tacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttg 59  Q
    |||||||||||  |||||||||||||||||||| |||| |  |||||||||||    
T  38471796 tacaattttcgttagtgagaacttatgaattaagataacaatttatttatttg 38471744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 38781172 - 38781239
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||| || ||||||||| ||||||||||    
T  38781172 agtgagaacttatgaattaacataaaagcatatttatttgcataa-ctcaaaaataagccaatccaaac 38781239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 45267491 - 45267440
Alignment:
Q  43 aaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtcc 94  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  45267491 aaaagcttatttatttgcataagctcaaaaataagtcaatccaaacaggtcc 45267440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 48819393 - 48819440
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  48819393 agtgagaacttatgaattaacataaaagcttatttatttgcataagct 48819440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 1005420 - 1005481
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| || ||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  1005420 atacaatttttgatagtgagaacttatgaattaacatcaaagctcatttatttgagtaagct 1005481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 15515353 - 15515292
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||||||||||||||||||||||| ||||||||||||||| | ||||||    
T  15515353 atacaattttcgttagtgagaacttatgaattaacatgaaagcttatttatttacttaagct 15515292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 22593413 - 22593352
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| |  ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  22593413 atacaatttttgttagtgagaacttataaattaacataaaagcttatttatttgcataagct 22593352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 3069860 - 3069809
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatt 57  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  3069860 atacaattttcactagtgagaacttatgaattaacataaaagcttatttatt 3069809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 9572776 - 9572729
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  9572776 agtgagaacttatgaattaatataaaagcttatttatttgcataagct 9572729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 37329418 - 37329359
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    ||||||||||||   |||||||||||| ||||||||||||||||||||||||||| ||||    
T  37329418 atacaattttcgttggtgagaacttataaattaacataaaagcttatttatttgcataag 37329359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 31378809 - 31378851
Alignment:
Q  41 ataaaagcttatttatttgcgtaagcttaaaaataagtcaatc 83  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  31378809 ataaaagcttatttatttgcataagcttaaaaataagtcaatc 31378851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 4068195 - 4068256
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||| |||||||  |||||||||||||||||||| ||||||| |||||||||||| ||||||    
T  4068195 atactattttcgttagtgagaacttatgaattaatataaaagtttatttatttgcataagct 4068256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 6337762 - 6337701
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| |  || |||||||||||||||||||||||||||||||| ||||| ||||||    
T  6337762 atacaatttttgttagcgagaacttatgaattaacataaaagcttatttgtttgcataagct 6337701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 37712147 - 37712208
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||| |||||  ||| |||||||||||||||||||||||| |||||||||||| ||||||    
T  37712147 atacaactttcgttagtaagaacttatgaattaacataaaagtttatttatttgcataagct 37712208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 16889021 - 16889073
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacagg 91  Q
    ||||||||||||||||||||||| ||||| || |||||| |||||||||||||    
T  16889021 acataaaagcttatttatttgcgcaagctaaacaataagccaatccaaacagg 16889073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 28870297 - 28870337
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  28870297 agtgagaacttatgaatgaacataaaagcttatttatttgc 28870337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 10082346 - 10082389
Alignment:
Q  21 gtgagaacttatgaattaacataaaagcttatttatttgcgtaa 64  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||    
T  10082346 gtgagaacttatgaattaatataaaagcttatttatttgtgtaa 10082389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 28690098 - 28690145
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||    
T  28690098 agtgagaaattctgaattaacataaaagcttatttatttgcataagct 28690145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 37156926 - 37156867
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    ||||||||||||  ||| ||| |||||||||||||||||||||||| |||||||| ||||    
T  37156926 atacaattttcgctagtaagatcttatgaattaacataaaagcttaattatttgcataag 37156867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 391255 - 391309
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacat-aaaagcttatttatttg 59  Q
    ||||||||||||  || |||||||||||||||||||| |||||||||||||||||    
T  391255 atacaattttcgttagcgagaacttatgaattaacataaaaagcttatttatttg 391309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 1005367 - 1005321
Alignment:
Q  42 taaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||||||||||||| |||||||||||||||| |||| |||||    
T  1005367 taaaagcttatttatttgcataagcttaaaaataagccaattcaaac 1005321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 1683906 - 1683816
Alignment:
Q  7 tacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtcctaa 97  Q
    |||||||||||  ||  ||||||||||||||| ||| |||| ||||||||| || |||||| ||||||||| |||| ||||| || |||||    
T  1683906 tacaattttcgttagcaagaacttatgaattaccatcaaaggttatttattagcataagctaaaaaataaggcaatacaaacgggccctaa 1683816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 16888972 - 16888918
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||||||   |||||||| |||||| |||||||||||||||||||||||||    
T  16888972 atacaattttcattagtgagaatttatgacttaacataaaagcttatttatttgc 16888918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 36178563 - 36178517
Alignment:
Q  42 taaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||||    
T  36178563 taaaagcttatttatttgcataagctcaaaagtaagtcaatccaaac 36178517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 23544887 - 23544931
Alignment:
Q  21 gtgagaacttatgaattaacataaaagcttatttatttgcgtaagc 66  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||    
T  23544887 gtgagaactta-gaattaacataaaagcttatttatttgcataagc 23544931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 35282586 - 35282518
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataag-tcaatccaaac 88  Q
    ||||| |||||||||||||| |||||||  ||||||||||| ||||||||||| |||| |||||||||||    
T  35282586 agtgaaaacttatgaattaatataaaagtctatttatttgcataagcttaaaa-taagctcaatccaaac 35282518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 41196716 - 41196655
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||| |  ||||||| ||| |||||||||||||| |||||||||||||| ||||||    
T  41196716 atacaatttttgttagtgagagcttgtgaattaacataaaggcttatttatttgcataagct 41196655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 46689558 - 46689497
Alignment:
Q  4 aaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    ||||| ||||||||  |||||||||||||||||||| |||| || |||||||||||| ||||    
T  46689558 aaataaaattttcgttagtgagaacttatgaattaatataatagtttatttatttgcataag 46689497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 15631982 - 15632066
Alignment:
Q  4 aaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||||||||||||  ||||||| | ||| |||||| |||||| ||||||||||| | |||||| ||||  || |||||||||||    
T  15631982 aaatacaattttcgttagtgagagcatataaattaaaataaaaacttatttatttacataagctcaaaataaactcaatccaaac 15632066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 41003481 - 41003521
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  41003481 agtgagaacttattaattaacataaaagtttatttatttgc 41003521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 45267546 - 45267594
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttattt 54  Q
    ||||||||||||  ||| ||||||||||||| |||||||||||||||||    
T  45267546 atacaattttcgttagtaagaacttatgaataaacataaaagcttattt 45267594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 10850074 - 10850019
Alignment:
Q  4 aaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttg 59  Q
    ||||||||||||||  | ||| ||||||| ||||||||| ||||||||||||||||    
T  10850074 aaatacaattttcgttaatgaaaacttataaattaacatgaaagcttatttatttg 10850019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 13039041 - 13039088
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||| ||||||||||| ||||||| |||||||||||| ||||||    
T  13039041 agtgagaagttatgaattaatataaaagtttatttatttgcataagct 13039088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 17814268 - 17814331
Alignment:
Q  4 aaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||  ||| |||||||||  ||||| |||||||||||||||||| | ||||||    
T  17814268 aaatacaattttcgttagtcagaacttatagattaaaataaaagcttatttatttacataagct 17814331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 26936889 - 26936842
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaa 86  Q
    ||||| |||||||||||||||| |||||| ||||||||| ||||||||    
T  26936889 acatagaagcttatttatttgcataagctaaaaaataagccaatccaa 26936842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 49738309 - 49738262
Alignment:
Q  4 aaatacaattttcgaaagtgagaacttatgaattaacataaaagctta 51  Q
    ||||||||||||||  |||||||||||||||||||| ||| |||||||    
T  49738309 aaatacaattttcgttagtgagaacttatgaattaatatagaagctta 49738262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 14461047 - 14460989
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaa 64  Q
    |||||||||||   ||||||||||||| |||||||||||||  || |||||||||||||    
T  14461047 atacaattttcattagtgagaacttataaattaacataaaaatttgtttatttgcgtaa 14460989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 26988248 - 26988282
Alignment:
Q  26 aacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||||||||||||||||||| ||||||||||    
T  26988248 aacttatgaattaacataaaagctaatttatttgc 26988282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 35590210 - 35590264
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaaca-taaaagcttatttatttg 59  Q
    ||||||||||||  |||||||||||||||||||||| ||||| ||| ||||||||    
T  35590210 atacaattttcgtcagtgagaacttatgaattaacattaaaaacttttttatttg 35590264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 36259297 - 36259231
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaa 72  Q
    ||||||||||||  | |||  |||||| |||||| |||||||||||||||||||| |||||| ||||    
T  36259297 atacaattttcgttaatgaagacttataaattaatataaaagcttatttatttgcataagctcaaaa 36259231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 47413475 - 47413513
Alignment:
Q  29 ttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  47413475 ttataaattaacataaaagcttatttatttgcataagct 47413513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 10365250 - 10365311
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||| | ||||| | |||||||||||||||||||| |||||| ||||||    
T  10365250 atacaattttcgttagtaaaaacttttaaattaacataaaagcttattcatttgcataagct 10365311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 12256687 - 12256752
Alignment:
Q  7 tacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaa 72  Q
    |||||||||||  ||| |||||||||||||||| ||||||  |||||||||||  |||||| ||||    
T  12256687 tacaattttcgttagtaagaacttatgaattaaaataaaaatttatttatttgtataagctcaaaa 12256752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 15791463 - 15791524
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  | ||||| ||||| |||||| |||||||||||||||||| | ||||||    
T  15791463 atacaattttcgttaatgagagcttataaattaaaataaaagcttatttatttacataagct 15791524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 17628431 - 17628370
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||||||| ||| | |||||| |||||||||||||||||| | ||||||    
T  17628431 atacaattttcgttagtgagagcttctaaattaaaataaaagcttatttatttacataagct 17628370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 20169360 - 20169405
Alignment:
Q  22 tgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||  ||||||||||||| ||||||||||||| ||||||    
T  20169360 tgagaacttaaaaattaacataaaaacttatttatttgcataagct 20169405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 32497278 - 32497217
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||||||| ||||| |||||| ||||||| |||||||||| | ||||||    
T  32497278 atacaattttcgttagtgagagcttataaattaaaataaaagtttatttatttacataagct 32497217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 34265671 - 34265732
Alignment:
Q  28 cttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaaca 89  Q
    ||||| ||||||||| ||| ||||||||||||  |||||||||||  || ||||||||||||    
T  34265671 cttataaattaacattaaaacttatttatttgtataagcttaaaataaactcaatccaaaca 34265732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 37431228 - 37431265
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatt 57  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  37431228 agtgaaaacttatgaattaacaaaaaagcttatttatt 37431265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 46500992 - 46500947
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    ||||| ||||||| ||| ||||||||||||||||||||||| ||||    
T  46500992 agtgaaaacttataaatcaacataaaagcttatttatttgcataag 46500947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 6337812 - 6337856
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatc 83  Q
    |||||||||||||||||||| | ||||||  ||||||||||||||    
T  6337812 acataaaagcttatttatttacataagctctaaaataagtcaatc 6337856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 8410213 - 8410265
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttattt 58  Q
    ||||||||||||  ||||||| ||| | |||||| ||||||||||||||||||    
T  8410213 atacaattttcgttagtgagagcttgtaaattaaaataaaagcttatttattt 8410265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 14862933 - 14862965
Alignment:
Q  26 aacttatgaattaacataaaagcttatttattt 58  Q
    ||||||||||||||||||||| |||||||||||    
T  14862933 aacttatgaattaacataaaaacttatttattt 14862965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 14868485 - 14868517
Alignment:
Q  26 aacttatgaattaacataaaagcttatttattt 58  Q
    ||||||||||||||||||||| |||||||||||    
T  14868485 aacttatgaattaacataaaaacttatttattt 14868517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 37431191 - 37431147
Alignment:
Q  44 aaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||||    
T  37431191 aaagcttatttatttgcacaagctcaaaaataagccaatccaaac 37431147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 46473192 - 46473228
Alignment:
Q  24 agaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||||||||||| |||||| |||||||||||||    
T  46473192 agaacttatgaattaatataaaatcttatttatttgc 46473228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 21720974 - 21720907
Alignment:
Q  26 aacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtcct 95  Q
    ||||||||||| || ||||||||||||| |||||| |||||||||||| |||||||||||||||||||||    
T  21720974 aacttatgaat-aatataaaagcttatt-atttgcataagcttaaaaacaagtcaatccaaacaggtcct 21720907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 40240583 - 40240522
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||||||| |||||||||||| |||||||||||||||||||| ||||||    
T  40240583 atacaattttcgttagtgagagcttatgaattaagataaaagcttatttatttgcataagct 40240522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 40581080 - 40581023
Alignment:
Q  8 acaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||||||||||| ||||    
T  40581080 acaattttcgttagtgagaacttatgaattaacataaaatcttatttatttgcataag 40581023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 52895410 - 52895357
Alignment:
Q  7 tacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||||||||  |||||||| ||||||||||||||||||||||||||||||||    
T  52895410 tacaattttcgttagtgagaatttatgaattaacataaaagcttatttatttgc 52895357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 29270462 - 29270514
Alignment:
Q  38 aacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacag 90  Q
    ||||||||||||||||||||||| |||||| ||||||||| ||||||||||||    
T  29270462 aacataaaagcttatttatttgcataagctaaaaaataagccaatccaaacag 29270514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 42956185 - 42956126
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    ||||||||||||  ||||||||||||| ||||||||||||| ||||||||||||| ||||    
T  42956185 atacaattttcgttagtgagaacttataaattaacataaaaacttatttatttgcataag 42956126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 48597873 - 48597818
Alignment:
Q  6 atacaattttcgaaagtgagaactta-tgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||||||||||||    
T  48597873 atacaattttcgtcagtgagaacttaatgaattaacataaaagcttatttatttgc 48597818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 10449061 - 10449123
Alignment:
Q  10 aattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaa 72  Q
    ||||||||  |||||||||||||||||||| |||||| ||||||||||||| |||||| ||||    
T  10449061 aattttcgttagtgagaacttatgaattaagataaaaacttatttatttgcataagctcaaaa 10449123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 38524171 - 38524229
Alignment:
Q  9 caattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||  ||| ||| ||||||||||||||||||||||||||||||||| ||||||    
T  38524171 caattttcgttagtaagatcttatgaattaacataaaagcttatttatttgcataagct 38524229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 20174946 - 20174885
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||| ||| ||||||||||| ||||||||||||||||||||| ||||||    
T  20174946 atacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagct 20174885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 43079940 - 43079887
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttg 59  Q
    ||||||||||||  | ||||||||||||||||||| ||||||||||||||||||    
T  43079940 atacaattttcgtgattgagaacttatgaattaacttaaaagcttatttatttg 43079887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 3845939 - 3845995
Alignment:
Q  11 attttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||  ||||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  3845939 attttcgctagtgaaaacatatgaattaacataaaagcttatttatttgcataagct 3845995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 23816163 - 23816095
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    |||||||||||||||||||||||| || ||| ||||||| | |||||| |||| | |||||||||||||    
T  23816163 agtgagaacttatgaattaacatacaaccttgtttatttacataagctaaaaatttagtcaatccaaac 23816095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 43079990 - 43080038
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaa 87  Q
    |||||||||||||||||||||| |||||| ||||||||| |||||||||    
T  43079990 acataaaagcttatttatttgcataagctaaaaaataagacaatccaaa 43080038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 46573443 - 46573399
Alignment:
Q  23 gagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||    
T  46573443 gagaatttatgaattaacataaaagcttatttatttgcataagct 46573399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 4974413 - 4974452
Alignment:
Q  28 cttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  4974413 cttatgaattaacataaaagcttatttatttgcataagct 4974452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 10521248 - 10521319
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacagg 91  Q
    ||||| ||||||| ||||| | ||||||||| ||||||||| ||| |||| |||||| ||||||||||||||    
T  10521248 agtgaaaacttataaattatcgtaaaagcttgtttatttgcataaacttataaataaatcaatccaaacagg 10521319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 34707719 - 34707660
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    ||||||||||||  || ||||||||| |||||||||||||| ||||||||||||| ||||    
T  34707719 atacaattttcgttagcgagaacttacgaattaacataaaaacttatttatttgcttaag 34707660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 27769749 - 27769795
Alignment:
Q  26 aacttatgaattaacataaaagcttatttatttgcgtaagcttaaaa 72  Q
    ||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  27769749 aacttataaattaacataaaagcttatttatttgcataagctcaaaa 27769795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 37243561 - 37243607
Alignment:
Q  21 gtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||||||    
T  37243561 gtgagaacttatgaattaagataaaagcttacttatttgcataagct 37243607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 52421197 - 52421250
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacaggtc 93  Q
    |||||||||||||||||||||||||||||| |||||||| |||| ||||| ||||    
T  52421197 acataaaagcttatttatttgcgtaagctt-aaaataagccaatacaaacgggtc 52421250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 53261774 - 53261712
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaac-ataaaagcttatttatttgcgtaagct 67  Q
    |||||| |||||  ||||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  53261774 atacaactttcgtcagtgagaacttatgaattaacaataaaagcttatttaattgcataagct 53261712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 17752137 - 17752076
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||| ||||||||| |||||||||||||| |||||||||| | ||||||    
T  17752137 atacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagct 17752076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 19053457 - 19053396
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||| ||||||||| |||||||||||||| |||||||||| | ||||||    
T  19053457 atacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagct 19053396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 33946540 - 33946495
Alignment:
Q  22 tgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||||||| ||||||||| |||||||||| ||||||    
T  33946540 tgagaacttatgaattaatataaaagctcatttatttgcataagct 33946495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 45331301 - 45331240
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||  ||||| |||||||||||||||||| |||||||||||| ||||||    
T  45331301 atacaattttcgctagcaagaacatatgaattaacataaaagtttatttatttgcataagct 45331240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 53787742 - 53787697
Alignment:
Q  22 tgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||    
T  53787742 tgagaacttatgaattaagataaaaacttatttatttgcataagct 53787697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 22809181 - 22809145
Alignment:
Q  24 agaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||||||||||||||| |||||||||||||    
T  22809181 agaacttatgaattaacataaaaacttatttatttgc 22809145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 29830645 - 29830593
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttattt 58  Q
    ||||||||||||  ||||||||||||| |||||| |||||| |||||||||||    
T  29830645 atacaattttcgttagtgagaacttataaattaaaataaaaacttatttattt 29830593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 37601044 - 37600981
Alignment:
Q  26 aacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagt-caatccaaaca 89  Q
    ||||||||||||||| |||||||||| |||||||| | ||||||||| ||||| |||||||||||    
T  37601044 aacttatgaattaacgtaaaagcttaattatttgcatcagcttaaaa-taagttcaatccaaaca 37600981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 37778213 - 37778265
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttattt 58  Q
    |||||||||| |  ||||||||||||| |||||| ||||||||||||||||||    
T  37778213 atacaatttttgttagtgagaacttataaattaaaataaaagcttatttattt 37778265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 43376776 - 43376836
Alignment:
Q  7 tacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||| || ||| |||||||||||||| |||||| |||||||| |||| ||||||    
T  43376776 tacaattttcgcaaatgaaaacttatgaattaatataaaaacttatttagttgcataagct 43376836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 52021276 - 52021224
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaacagg 91  Q
    |||||||||| ||||||||||| |||||| |||||| || |||||||||||||    
T  52021276 acataaaagcatatttatttgcataagctaaaaaatgagccaatccaaacagg 52021224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 53218046 - 53217998
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttattt 54  Q
    ||||||||||||  ||||||||||||| |||||| ||||||||||||||    
T  53218046 atacaattttcgttagtgagaacttataaattaaaataaaagcttattt 53217998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 101
Target Start/End: Complemental strand, 16072978 - 16072948
Alignment:
Q  71 aaataagtcaatccaaacaggtcctaagtgt 101  Q
    |||||||||||||||||||||||||||||||    
T  16072978 aaataagtcaatccaaacaggtcctaagtgt 16072948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 35480347 - 35480301
Alignment:
Q  53 ttatttgcgtaagcttaaaaataagtcaatccaaacaggtcctaagt 99  Q
    |||||| | |||||| ||||||||||||||||||||||| |||||||    
T  35480347 ttattttcataagctcaaaaataagtcaatccaaacaggccctaagt 35480301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 38631067 - 38631133
Alignment:
Q  1 atgaaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||||| |  | ||||||||||||||||||  ||||||  ||||||||||| ||||||    
T  38631067 atgaaatacaattttggttattgagaacttatgaattaatgtaaaagaatatttatttgcataagct 38631133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 1516104 - 1516043
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||   ||||||||||||| |||||| |||||| ||||||||||| | ||||||    
T  1516104 atacaattttcattagtgagaacttataaattaaaataaaaacttatttatttacataagct 1516043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 3876249 - 3876208
Alignment:
Q  26 aacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||| |||||| ||||||||||||| ||||||    
T  3876249 aacttatgaattaatataaaaacttatttatttgcataagct 3876208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 7292779 - 7292816
Alignment:
Q  28 cttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  7292779 cttaggaattaacataaaaacttatttatttgcgtaag 7292816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 20685865 - 20685918
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttg 59  Q
    |||||||||||   ||||||||||| ||||||| ||||||| ||||||||||||    
T  20685865 atacaattttcattagtgagaacttgtgaattatcataaaaacttatttatttg 20685918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 21720987 - 21721048
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||  ||||||||||||||| |||||||||||  ||| || ||||| ||||||    
T  21720987 atacaattttcgttagtgagaacttatgacttaacataaaaaattacttttttgcataagct 21721048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 23555523 - 23555568
Alignment:
Q  42 taaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaa 87  Q
    ||||||||||||||||||| |||||| ||||||||| |||| ||||    
T  23555523 taaaagcttatttatttgcataagctcaaaaataagccaatacaaa 23555568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 48816795 - 48816856
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||   || ||| ||||| ||||||| ||||||||||||||||||| ||||||    
T  48816795 atacaattttcgttggtaagatcttataaattaacttaaaagcttatttatttgcataagct 48816856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 10667492 - 10667560
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 88  Q
    ||||| |||||||  |||| | ||||||||| ||||||||| ||| |||| |||||| |||||||||||    
T  10667492 agtgaaaacttatatattatcgtaaaagcttgtttatttgcataaacttataaataaatcaatccaaac 10667560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 30383867 - 30383899
Alignment:
Q  28 cttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||||||||||| |||||||||||||    
T  30383867 cttatgaattaacataaaaacttatttatttgc 30383899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 37586326 - 37586270
Alignment:
Q  4 aaatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    |||||| |||||||   ||||||| |||| |||||| ||||||||||||||||||||    
T  37586326 aaatacgattttcgttggtgagaagttataaattaagataaaagcttatttatttgc 37586270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 52895431 - 52895479
Alignment:
Q  41 ataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaaca 89  Q
    ||||||| |||||||||||| |||||| |||| |||| |||||||||||    
T  52895431 ataaaagtttatttatttgcataagctaaaaattaaggcaatccaaaca 52895479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 14752 - 14693
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaag 65  Q
    ||||||||||||  ||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  14752 atacaattttcgttagtgagaacttataaattaacatgaaagcttatttatttgcataag 14693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 14788 - 14840
Alignment:
Q  26 aacttatgaatta-acataaaagcttatttatttgcgtaagcttaaaaataag 77  Q
    ||||||||||| | |||||||||||||||||||||  |||||| |||||||||    
T  14788 aacttatgaataatacataaaagcttatttatttgtataagctcaaaaataag 14840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 48615 - 48573
Alignment:
Q  25 gaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  48615 gaacttatgaattaacataaaagcttatttatttgcataagct 48573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 24841 - 24888
Alignment:
Q  20 agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    ||||||||||||| ||||||||||||| ||||||||||||| ||||||    
T  24841 agtgagaacttataaattaacataaaaacttatttatttgcataagct 24888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 4143 - 4205
Alignment:
Q  5 aatacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 67  Q
    |||||||||||||  |||| |||||||| |||||||||||||||| ||| |||||| ||||||    
T  4143 aatacaattttcgttagtgggaacttataaattaacataaaagctcattgatttgcataagct 4205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 89309 - 89357
Alignment:
Q  39 acataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaa 87  Q
    |||| ||| ||| ||||||||| ||||||||||||||||||||||||||    
T  89309 acattaaaacttttttatttgcataagcttaaaaataagtcaatccaaa 89357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 89275 - 89233
Alignment:
Q  18 aaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||| ||| |||||||||||||||||| ||||||||||||    
T  89275 aaagtgaaaacgtatgaattaacataaaagtttatttatttgc 89233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 227787 - 227841
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacataaaagcttatttatttgc 60  Q
    ||||||||||||  ||| ||| |||||||||||||||||||||||| || |||||    
T  227787 atacaattttcgttagtaagatcttatgaattaacataaaagcttaattctttgc 227841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 97215 - 97179
Alignment:
Q  6 atacaattttcgaaagtgagaacttatgaattaacat 42  Q
    ||||||||||||  |||||||||||||||||||||||    
T  97215 atacaattttcgttagtgagaacttatgaattaacat 97179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University