View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9361A_low_3 (Length: 534)

Name: NF9361A_low_3
Description: NF9361A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9361A_low_3
NF9361A_low_3
[»] chr8 (19 HSPs)
chr8 (7-241)||(45451029-45451263)
chr8 (271-428)||(35812981-35813138)
chr8 (271-432)||(30436009-30436171)
chr8 (285-393)||(45450872-45450980)
chr8 (284-427)||(2350418-2350561)
chr8 (271-432)||(3653969-3654130)
chr8 (428-516)||(9107613-9107702)
chr8 (275-427)||(23221730-23221882)
chr8 (327-427)||(42738508-42738608)
chr8 (270-408)||(15244599-15244737)
chr8 (271-375)||(28968944-28969048)
chr8 (271-393)||(3940954-3941076)
chr8 (384-427)||(32018940-32018983)
chr8 (384-427)||(38895290-38895333)
chr8 (270-428)||(6143509-6143667)
chr8 (382-427)||(5913935-5913980)
chr8 (403-446)||(958107-958150)
chr8 (399-427)||(24101209-24101237)
chr8 (399-427)||(41377739-41377767)
[»] chr5 (25 HSPs)
chr5 (40-241)||(6453686-6453887)
chr5 (271-427)||(6238585-6238741)
chr5 (271-427)||(6900295-6900451)
chr5 (284-428)||(36016555-36016699)
chr5 (271-427)||(38355684-38355840)
chr5 (271-427)||(4695472-4695628)
chr5 (271-427)||(33907498-33907654)
chr5 (306-427)||(24477703-24477824)
chr5 (271-427)||(37205226-37205382)
chr5 (271-427)||(9996533-9996684)
chr5 (271-393)||(31230814-31230936)
chr5 (271-393)||(21732007-21732129)
chr5 (295-369)||(75644-75718)
chr5 (385-427)||(20337728-20337770)
chr5 (271-393)||(42860003-42860125)
chr5 (384-429)||(21151191-21151236)
chr5 (384-429)||(21158332-21158377)
chr5 (285-372)||(1845709-1845796)
chr5 (298-389)||(6955485-6955576)
chr5 (384-427)||(17017072-17017115)
chr5 (271-361)||(35038471-35038561)
chr5 (327-391)||(10641756-10641820)
chr5 (295-376)||(4970241-4970322)
chr5 (386-427)||(19646397-19646438)
chr5 (387-427)||(7344200-7344240)
[»] chr4 (28 HSPs)
chr4 (271-427)||(43285413-43285569)
chr4 (271-428)||(52463234-52463391)
chr4 (271-427)||(951653-951809)
chr4 (295-427)||(32594802-32594929)
chr4 (284-427)||(20033949-20034092)
chr4 (295-427)||(47295889-47296016)
chr4 (284-427)||(32768387-32768530)
chr4 (268-424)||(7137610-7137766)
chr4 (271-427)||(27870297-27870448)
chr4 (271-370)||(34858316-34858415)
chr4 (295-427)||(45522812-45522939)
chr4 (271-389)||(17544151-17544269)
chr4 (270-427)||(44341768-44341925)
chr4 (271-393)||(2323490-2323612)
chr4 (295-372)||(3409835-3409912)
chr4 (297-376)||(41361981-41362060)
chr4 (384-427)||(41882605-41882648)
chr4 (295-393)||(1324060-1324158)
chr4 (387-427)||(19823063-19823103)
chr4 (387-427)||(31615960-31616000)
chr4 (384-427)||(16624099-16624142)
chr4 (392-427)||(52278249-52278284)
chr4 (306-393)||(54134191-54134278)
chr4 (398-428)||(1324040-1324070)
chr4 (399-429)||(26706352-26706382)
chr4 (295-373)||(44857024-44857102)
chr4 (359-427)||(1604114-1604182)
chr4 (307-351)||(1704514-1704558)
[»] chr3 (23 HSPs)
chr3 (271-435)||(6884238-6884402)
chr3 (271-427)||(27877816-27877972)
chr3 (271-427)||(43745832-43745988)
chr3 (271-426)||(33986116-33986271)
chr3 (271-427)||(46312150-46312299)
chr3 (271-427)||(43736569-43736715)
chr3 (271-368)||(26843539-26843636)
chr3 (284-373)||(50737162-50737251)
chr3 (284-373)||(50775604-50775693)
chr3 (271-372)||(46219389-46219490)
chr3 (284-427)||(19976428-19976572)
chr3 (385-431)||(1459728-1459774)
chr3 (384-428)||(51884762-51884806)
chr3 (384-427)||(29522253-29522296)
chr3 (284-361)||(21075611-21075688)
chr3 (285-337)||(24311736-24311788)
chr3 (384-427)||(36638698-36638741)
chr3 (384-427)||(48912743-48912786)
chr3 (384-427)||(49507962-49508005)
chr3 (399-427)||(9300523-9300551)
chr3 (387-427)||(14740477-14740517)
chr3 (387-427)||(35603283-35603323)
chr3 (399-427)||(41208841-41208869)
[»] chr7 (17 HSPs)
chr7 (271-427)||(10993591-10993747)
chr7 (270-427)||(35710574-35710731)
chr7 (335-427)||(16526532-16526624)
chr7 (285-427)||(7505873-7506015)
chr7 (284-427)||(17471288-17471426)
chr7 (284-427)||(17581788-17581926)
chr7 (357-427)||(39489006-39489076)
chr7 (271-389)||(1873931-1874049)
chr7 (271-372)||(23025448-23025549)
chr7 (384-427)||(40921241-40921284)
chr7 (295-372)||(4267655-4267732)
chr7 (271-368)||(49113342-49113439)
chr7 (271-354)||(41202597-41202680)
chr7 (270-337)||(19106601-19106668)
chr7 (384-428)||(18833680-18833724)
chr7 (387-427)||(31325980-31326020)
chr7 (387-427)||(33889806-33889846)
[»] chr2 (21 HSPs)
chr2 (271-427)||(21104290-21104446)
chr2 (270-393)||(26555832-26555955)
chr2 (271-427)||(15613306-15613461)
chr2 (270-393)||(4469899-4470022)
chr2 (295-429)||(15560243-15560377)
chr2 (271-421)||(17921483-17921632)
chr2 (284-427)||(20921886-20922030)
chr2 (271-392)||(42730052-42730173)
chr2 (271-427)||(38837283-38837439)
chr2 (284-393)||(40860731-40860840)
chr2 (271-393)||(29205686-29205808)
chr2 (284-372)||(40000507-40000595)
chr2 (271-389)||(25096569-25096687)
chr2 (271-372)||(9471630-9471731)
chr2 (384-432)||(30556239-30556287)
chr2 (384-427)||(10710422-10710465)
chr2 (270-368)||(38571366-38571464)
chr2 (392-427)||(19944238-19944273)
chr2 (392-427)||(25868379-25868414)
chr2 (399-427)||(1345733-1345761)
chr2 (392-428)||(12847303-12847339)
[»] scaffold0564 (1 HSPs)
scaffold0564 (271-427)||(9780-9936)
[»] chr6 (13 HSPs)
chr6 (271-427)||(26519856-26520012)
chr6 (271-427)||(11369202-11369359)
chr6 (271-427)||(15071092-15071248)
chr6 (270-427)||(31654852-31655009)
chr6 (324-427)||(3045029-3045132)
chr6 (308-430)||(12075818-12075940)
chr6 (285-427)||(12271376-12271518)
chr6 (270-373)||(17878232-17878335)
chr6 (271-373)||(17868449-17868551)
chr6 (271-362)||(31470975-31471066)
chr6 (284-426)||(27965775-27965917)
chr6 (295-372)||(10998049-10998126)
chr6 (384-427)||(32464863-32464906)
[»] chr1 (21 HSPs)
chr1 (284-427)||(33189324-33189467)
chr1 (271-427)||(4221851-4222007)
chr1 (271-427)||(9660488-9660639)
chr1 (265-373)||(43263174-43263282)
chr1 (271-393)||(46158358-46158480)
chr1 (306-427)||(45566573-45566693)
chr1 (271-372)||(45756955-45757055)
chr1 (295-427)||(32058150-32058282)
chr1 (271-393)||(12749875-12749997)
chr1 (271-389)||(17332081-17332198)
chr1 (284-393)||(43780864-43780973)
chr1 (270-401)||(31488814-31488946)
chr1 (280-355)||(6502012-6502087)
chr1 (387-427)||(23973640-23973680)
chr1 (271-355)||(47188277-47188361)
chr1 (384-427)||(700561-700604)
chr1 (399-428)||(28472822-28472851)
chr1 (392-429)||(50511429-50511466)
chr1 (387-427)||(21720446-21720486)
chr1 (387-427)||(27415615-27415655)
chr1 (384-428)||(40411980-40412024)
[»] scaffold0041 (1 HSPs)
scaffold0041 (384-427)||(51811-51854)


Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 7 - 241
Target Start/End: Complemental strand, 45451263 - 45451029
Alignment:
Q  7 atcatacccaatttgccaatctacaatgttacatgttattctgcttgttgatttgtgttttttgttgtactgttcttgttcctccttcttaggtagtgat 106  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  45451263 atcagacccaatttgccaatctacaatgttacttgttattctgcttgttgatttgtgttttctgttgtactgttcttgttcctccttcttaggtagtgat 45451164  T
Q  107 tcattgtttgcactttagtggcttttgggttgggaggcactcttttatttctttctgccaatgtttttctttgttgttgtaggcttgtagtcacttggct 206  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45451163 tcattgtttgcaatttagtggcttttgggttgggaggtactcttttatttctttctgccaatgtttttctttgttgttgtaggcttgtagttacttggct 45451064  T
Q  207 tttgcaaatcttcttaatttaacgaatatgccgtt 241  Q
    |||||||||||||||||||||| ||||||||||||    
T  45451063 tttgcaaatcttcttaatttaatgaatatgccgtt 45451029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 271 - 428
Target Start/End: Complemental strand, 35813138 - 35812981
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  35813138 gggctggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaactgggctttttagcccggcccttaaaagc 35813039  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctctat 428  Q
    || | | ||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  35813038 ccttggcccggccgggccgggcctaaacgggccgggccgcccgttttgacagctctat 35812981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 271 - 432
Target Start/End: Complemental strand, 30436171 - 30436009
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattc-cagcccatattcaaacagagctttttagctcggccctaaaaag 369  Q
    |||||||| ||| ||||||| || |||||||||| |||||||| ||||  || ||  |||||||||||||||| | |||||||||| ||||||| |||||    
T  30436171 gggctggcccgttagcccgggagcccgtatagggccgggctcgggctcatttttttgcagcccatattcaaaccgggctttttagcccggcccttaaaag 30436072  T
Q  370 cccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctctatatat 432  Q
    ||| | | ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  30436071 cccttggcccggccgggccgggcctaaacgggccgggccgcccgttttgacagctctaaatat 30436009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 285 - 393
Target Start/End: Complemental strand, 45450980 - 45450872
Alignment:
Q  285 gcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgaccg 384  Q
    ||||||||| |||||||||| | |||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||  ||||| |||||||    
T  45450980 gcccggaagcccgtatagggccaggctcgggctccattattccagcccatattcaaacagggctttttagcccggccctaaaaagttcgttgcccgaccg 45450881  T
Q  385 ggccgggcc 393  Q
    |||| ||||    
T  45450880 ggcctggcc 45450872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 284 - 427
Target Start/End: Original strand, 2350418 - 2350561
Alignment:
Q  284 agcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgacc 383  Q
    ||||||| || | |||||||| |||||||| |||| |||||||| ||||||||| |||  | |||||| ||| ||| || ||||||||||||  ||| ||    
T  2350418 agcccgggagcctgtatagggccgggctcgggctcaattattcccgcccatatttaaatcgggcttttcagcccggtccgaaaaagcccgttacccggcc 2350517  T
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  2350518 gggccgggcctaaacgggccgggccgcccgttttgacagctcta 2350561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 271 - 432
Target Start/End: Complemental strand, 3654130 - 3653969
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||| ||| ||| ||||||| || | |||||||| |||| ||| ||||  || || |||||||||||||||| | |||||||||| ||||||| |||| |    
T  3654130 gggccggcccgttagcccgggagcctgtatagggccgggatcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaatc 3654031  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctctatatat 432  Q
    || | | ||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  3654030 ccttggcccggccgggccaggcctaaacgggccgggccgcccgttttgacagctctatatat 3653969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 428 - 516
Target Start/End: Original strand, 9107613 - 9107702
Alignment:
Q  428 tatatatacaactgttattttattttattt-aggatcatttgattttggttgtaattttacgtttcatagtcttgttatcaccttttgat 516  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||    
T  9107613 tatatatacaactattattttattttattttaggatcatttgattttggttgtaattttacattttacagtcttgttatcaccttttgat 9107702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 427
Target Start/End: Complemental strand, 23221882 - 23221730
Alignment:
Q  275 tggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgt 374  Q
    |||| ||| ||||||| || ||||||||||  ||||||| ||||  || || ||||||||||| |||| | |||||||||| ||||||| |||||||| |    
T  23221882 tggcccgttagcccgggagcccgtatagggcggggctcgggctcattttttgcagcccatattgaaaccgggctttttagcccggcccttaaaagccctt 23221783  T
Q  375 tgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
     | ||  |||||||||||||||||||| ||||| |||||| ||||||||||||    
T  23221782 ggccccgccgggccgggcctaaacgggccgggctgcccgtattgacagctcta 23221730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 327 - 427
Target Start/End: Complemental strand, 42738608 - 42738508
Alignment:
Q  327 cagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctct 426  Q
    |||||||||||||||| | |||||||||| ||||||| |||||||| | | ||||||||  |||||||||||||| | ||||||||||||||||||||||    
T  42738608 cagcccatattcaaaccgggctttttagcccggcccttaaaagcccttggcccgaccggatcgggcctaaacgggccaggccgcccgttttgacagctct 42738509  T
Q  427 a 427  Q
    |    
T  42738508 a 42738508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 408
Target Start/End: Original strand, 15244599 - 15244737
Alignment:
Q  270 cgggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaag 369  Q
    ||||||||| ||| |||||||||| |||||||||| ||| |||| |||| ||| ||  |||||||||| |||| | |||||||||| ||||||||||||     
T  15244599 cgggctggcccgttagcccggaagcccgtatagggccggactcgggctctatttttttagcccatatttaaaccgggctttttagcccggccctaaaaaa 15244698  T
Q  370 cccgttgtccgaccgggccgggcctaaacgggtcgggcc 408  Q
    ||| || ||||  ||||||||| ||||||||| ||||||    
T  15244699 cccattatccgttcgggccgggactaaacgggccgggcc 15244737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 28968944 - 28969048
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||||||| |||||||||| ||||| |||| |||||||| |||| ||| ||||||||||||||||||||  |||||| ||| ||||||| ||||||    
T  28968944 gggctggctcgttagcccggaagcccgtacagggccgggctcgggctctatttttccagcccatattcaaacaaggcttttcagcccggcccttaaaagc 28969043  T
Q  371 ccgtt 375  Q
     ||||    
T  28969044 tcgtt 28969048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 393
Target Start/End: Original strand, 3940954 - 3941076
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||| ||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  3940954 gggccggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaactgggctttttagcccggcccttaaaagc 3941053  T
Q  371 ccgttgtccgaccgggccgggcc 393  Q
    || | | ||| || |||||||||    
T  3941054 ccttggcccggccaggccgggcc 3941076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 384 - 427
Target Start/End: Original strand, 32018940 - 32018983
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| |||||||||| |||||||||||||||||||||||||    
T  32018940 gggccggccctaaacgggccgggccgcccgttttgacagctcta 32018983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 384 - 427
Target Start/End: Original strand, 38895290 - 38895333
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| |||||||||| |||||||||||||||||||||||||    
T  38895290 gggccggccctaaacgggccgggccgcccgttttgacagctcta 38895333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 428
Target Start/End: Original strand, 6143509 - 6143667
Alignment:
Q  270 cgggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaag 369  Q
    ||||||||| ||| ||||||| || | |||||||| |||||||| |||| |||||| || ||| |||| |||  | |||||| ||| || ||||||||||    
T  6143509 cgggctggcccgttagcccgggagcctgtatagggccgggctcgggctctattatttcatcccgtatttaaatcgggcttttcagcccgaccctaaaaag 6143608  T
Q  370 cccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctctat 428  Q
    ||||  | |||  |||||||| || ||| ||| |  |  ||||||||||||||||||||    
T  6143609 cccgcagcccgttcgggccggcccgaaaagggccccgtagcccgttttgacagctctat 6143667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 427
Target Start/End: Original strand, 5913935 - 5913980
Alignment:
Q  382 ccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||||  |||||||||| |||||||||||||||||||||||||    
T  5913935 ccgggccgaccctaaacgggccgggccgcccgttttgacagctcta 5913980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 446
Target Start/End: Original strand, 958107 - 958150
Alignment:
Q  403 cgggccgcccgttttgacagctctatatatatacaactgttatt 446  Q
    |||||||||||||||||||||| |||||||||| || |||||||    
T  958107 cgggccgcccgttttgacagctatatatatatataagtgttatt 958150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 427
Target Start/End: Complemental strand, 24101237 - 24101209
Alignment:
Q  399 gggtcgggccgcccgttttgacagctcta 427  Q
    |||||||||||||||||||||||||||||    
T  24101237 gggtcgggccgcccgttttgacagctcta 24101209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 427
Target Start/End: Original strand, 41377739 - 41377767
Alignment:
Q  399 gggtcgggccgcccgttttgacagctcta 427  Q
    |||||||||||||||||||||||||||||    
T  41377739 gggtcgggccgcccgttttgacagctcta 41377767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 186; Significance: 1e-100; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 40 - 241
Target Start/End: Original strand, 6453686 - 6453887
Alignment:
Q  40 tgttattctgcttgttgatttgtgttttttgttgtactgttcttgttcctccttcttaggtagtgattcattgtttgcactttagtggcttttgggttgg 139  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6453686 tgttattctgcttgttgatttgtgctttttgttgtactgttcttgttcctccttcttaggtagtgattcattgtttgcactttagtggcttttgggttgg 6453785  T
Q  140 gaggcactcttttatttctttctgccaatgtttttctttgttgttgtaggcttgtagtcacttggcttttgcaaatcttcttaatttaacgaatatgccg 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||    
T  6453786 gaggcactcttttatttctttctgccaatgtttttctttgttgttgtaggcttgtagttacttggcttttgcaaatcttcctaatttaatgaatatgccg 6453885  T
Q  240 tt 241  Q
    ||    
T  6453886 tt 6453887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 271 - 427
Target Start/End: Original strand, 6238585 - 6238741
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  6238585 gggctggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 6238684  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    || | | ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  6238685 ccttggcccggccgggccgggcctaaacgggccgggccgcccgttttgacagctcta 6238741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 271 - 427
Target Start/End: Original strand, 6900295 - 6900451
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  6900295 gggctggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 6900394  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    || | | ||| |||||||| ||||||||||| |||||||||||||||||||||||||    
T  6900395 ccttggcccggccgggccgagcctaaacgggccgggccgcccgttttgacagctcta 6900451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 284 - 428
Target Start/End: Original strand, 36016555 - 36016699
Alignment:
Q  284 agcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgacc 383  Q
    ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| |||||||| | | ||| ||    
T  36016555 agcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagcccttggcccggcc 36016654  T
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctctat 428  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  36016655 gggccgggcctaaacgggccgggccgcccgttttgacagctctat 36016699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 271 - 427
Target Start/End: Complemental strand, 38355840 - 38355684
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| |||| || || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| || |||| ||||||    
T  38355840 gggctggcccgttagccagggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccgacccttaaaagc 38355741  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    || | | ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38355740 ccttggcccggccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 38355684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 271 - 427
Target Start/End: Complemental strand, 4695628 - 4695472
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || |||||||||| |||||||| ||    || |  |||||||||||||||| | |||||||||| ||||||| ||||||    
T  4695628 gggctggcccgttagcccgggagcccgtatagggccgggctcgggcctgtttttagcagcccatattcaaaccgggctttttagcccggcccttaaaagc 4695529  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    || | | ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  4695528 ccttggcccggccgggccgggcctaaacgggccgggccgcccgttttgacagctcta 4695472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 271 - 427
Target Start/End: Complemental strand, 33907654 - 33907498
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||| ||| || ||||| |||| |||||||| |||| ||| |||||||||||||| |||  | |||||||||| ||||||| ||||||    
T  33907654 gggctggcccgttagctcgggagcccgtaaagggtcgggctcgggctctatttttccagcccatatttaaatcgggctttttagcccggcccttaaaagc 33907555  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    || |   ||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  33907554 ccttgacccggccggaccgggcctaaacgggtcgggccgcccgttttgacagctcta 33907498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 306 - 427
Target Start/End: Original strand, 24477703 - 24477824
Alignment:
Q  306 cgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgaccgggccgggcctaaacgggtcgg 405  Q
    |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| |||||||| | | ||| |||||||||||||||||||| |||    
T  24477703 cgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagcccttggcccggccgggccgggcctaaacgggccgg 24477802  T
Q  406 gccgcccgttttgacagctcta 427  Q
    ||||||||||||||||||||||    
T  24477803 gccgcccgttttgacagctcta 24477824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 271 - 427
Target Start/End: Complemental strand, 37205382 - 37205226
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || |||||||||| | |||||| |||| |||||| |||||| |||| |||| | |||||||||| ||||||||||||||    
T  37205382 gggctggcccgttagcccgggagcccgtatagggccaggctcgggctctattatttcagcccgtatttaaaccgggctttttagcccggccctaaaaagc 37205283  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||  | ||| ||||||| | || ||||||||||||  ||||| |||||||||||||    
T  37205282 ccgaagcccgtccgggccagcccgaaacgggtcgggtagcccgctttgacagctcta 37205226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 427
Target Start/End: Original strand, 9996533 - 9996684
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||| ||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| | ||||| ||||||    
T  9996533 gggccggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccagcccttaaaagc 9996632  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    || |     | || ||||||||||||||||| |||||||||||||||||||||||||    
T  9996633 cctt-----ggcccggccgggcctaaacgggccgggccgcccgttttgacagctcta 9996684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 393
Target Start/End: Original strand, 31230814 - 31230936
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || |||||||||| |||||||| || | ||| |||||||||||||| |||| | | |||||||| |||| ||||||||     
T  31230814 gggctggcccgttagcccgggagcccgtatagggccgggctcgggccctatttttccagcccatatttaaaccgggttttttagcccggctctaaaaagt 31230913  T
Q  371 ccgttgtccgaccgggccgggcc 393  Q
    | |||| |||| |||||||||||    
T  31230914 ctgttgcccgatcgggccgggcc 31230936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 393
Target Start/End: Original strand, 21732007 - 21732129
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||| ||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  21732007 gggccggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 21732106  T
Q  371 ccgttgtccgaccgggccgggcc 393  Q
    || | | ||| || |||||||||    
T  21732107 ccttggcccggcccggccgggcc 21732129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 295 - 369
Target Start/End: Original strand, 75644 - 75718
Alignment:
Q  295 ccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaag 369  Q
    |||||||||| |||||||| |||| ||||||||||||| |||| ||| || |||||||| | |||||||||||||    
T  75644 ccgtatagggccgggctcgggctcaattattccagcccttatttaaatagggctttttaacccggccctaaaaag 75718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 385 - 427
Target Start/End: Complemental strand, 20337770 - 20337728
Alignment:
Q  385 ggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  20337770 ggccgggcctaaacgggtcgggccgcccattttgacagctcta 20337728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 271 - 393
Target Start/End: Complemental strand, 42860125 - 42860003
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||| ||| ||| ||||||| || |||||||||| ||| |||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  42860125 gggccggcccgttagcccgggagcccgtatagggccggactcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 42860026  T
Q  371 ccgttgtccgaccgggccgggcc 393  Q
    || | | ||| || |||||||||    
T  42860025 ccttggcccggcccggccgggcc 42860003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 21151236 - 21151191
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctctata 429  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  21151236 gggccggccctaaacgggccgggccgcccgttttgacagctctata 21151191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 21158377 - 21158332
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctctata 429  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||    
T  21158377 gggccggccctaaacgggtcgggctgcccgttttgacagctctata 21158332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 372
Target Start/End: Original strand, 1845709 - 1845796
Alignment:
Q  285 gcccggaagtccgtatagggacgggctcgagctccattattc-cagcccatattcaaacagagctttttagctcggccctaaaaagccc 372  Q
    |||||| || |||||||||| |||||||| |||| ||||||  |||||||||||||||| | |||||||||| ||||||| ||||||||    
T  1845709 gcccgggagcccgtatagggccgggctcgggctc-attatttgcagcccatattcaaaccgggctttttagcccggcccttaaaagccc 1845796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 298 - 389
Target Start/End: Complemental strand, 6955576 - 6955485
Alignment:
Q  298 tatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgaccgggccg 389  Q
    ||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| |||||||| | | ||| ||||||||    
T  6955576 tatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagcccttggcccggccgggccg 6955485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 384 - 427
Target Start/End: Original strand, 17017072 - 17017115
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  17017072 gggccggacctaaacgggtcgggccgtccgttttgacagctcta 17017115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 361
Target Start/End: Complemental strand, 35038561 - 35038471
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggcc 361  Q
    |||| ||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| || ||||||||| |||||    
T  35038561 gggccggcccgttagcccgggagcccgtatagggtcgggctcgggctcattttttgcagcccatattcaaaccgaactttttagcccggcc 35038471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 391
Target Start/End: Complemental strand, 10641820 - 10641756
Alignment:
Q  327 cagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgaccgggccggg 391  Q
    |||||||||||||||| | |||||||||| ||||||| |||||||| | | ||| ||||||||||    
T  10641820 cagcccatattcaaaccgggctttttagcccggcccttaaaagcccttggcccggccgggccggg 10641756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 376
Target Start/End: Complemental strand, 4970322 - 4970241
Alignment:
Q  295 ccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttg 376  Q
    |||||| ||| |||||||| |||| | | ||||||| |||||| |||| | |||||||| | ||||||| ||||||||||||    
T  4970322 ccgtattgggccgggctcgggctctaattttccagctcatatttaaactgggctttttaacccggccctcaaaagcccgttg 4970241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 427
Target Start/End: Complemental strand, 19646438 - 19646397
Alignment:
Q  386 gccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||    
T  19646438 gccggccctaaacggatcgggccacccgttttgacagctcta 19646397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 7344240 - 7344200
Alignment:
Q  387 ccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||| ||||||| |||||||||| |||||||||||||||||    
T  7344240 ccggccctaaacaggtcgggccgtccgttttgacagctcta 7344200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 3e-40; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 271 - 427
Target Start/End: Complemental strand, 43285569 - 43285413
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || |||||||||| |||||||| |||| ||| || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  43285569 gggctggcccgttagcccgggagcccgtatagggccgggctcgggctctatttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 43285470  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    || | | ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  43285469 ccttggcccgtccgggccgggcctaaacgggccgggccgcccgttttgacagctcta 43285413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 271 - 428
Target Start/End: Complemental strand, 52463391 - 52463234
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || |||||||||| |||||||| |||| ||| || |||||||||||||||  | |||||||||| ||||||| ||||||    
T  52463391 gggctggcccgttagcccgggagcccgtatagggccgggctcgggctctatttttgcagcccatattcaaatcgggctttttagcccggcccttaaaagc 52463292  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctctat 428  Q
    || | | |||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  52463291 ccttggcccgatcgggccgggcctaaacgggccgggccgcccgttttgacagctctat 52463234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 271 - 427
Target Start/End: Original strand, 951653 - 951809
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||| ||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  951653 gggccggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 951752  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    || | | ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  951753 ccttggcccggccgggccgggcctaaacgggccgggccgcccgttttgacagctcta 951809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 295 - 427
Target Start/End: Original strand, 32594802 - 32594929
Alignment:
Q  295 ccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgaccgggccgggcct 394  Q
    |||||||||| ||||||||||||| |||||||||||||||||| |||| | |||||| ||| |||||| ||||||||||||     ||| ||||| ||||    
T  32594802 ccgtatagggccgggctcgagctcaattattccagcccatatttaaaccgggcttttcagcccggcccgaaaaagcccgtt-----acccggccgagcct 32594896  T
Q  395 aaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| ||||||| |||||||||||||||||    
T  32594897 aaacgggccgggccgtccgttttgacagctcta 32594929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 284 - 427
Target Start/End: Complemental strand, 20034092 - 20033949
Alignment:
Q  284 agcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgacc 383  Q
    ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| |||||||| |   ||| ||    
T  20034092 agcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagcccttgacccggcc 20033993  T
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
     ||||||| ||||||||| |||||||||||||||||||||||||    
T  20033992 cggccggggctaaacgggccgggccgcccgttttgacagctcta 20033949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 295 - 427
Target Start/End: Original strand, 47295889 - 47296016
Alignment:
Q  295 ccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgaccgggccgggcct 394  Q
    |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| |||||||| |     | || ||||||||||    
T  47295889 ccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagccctt-----ggcccggccgggcct 47295983  T
Q  395 aaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||||||||||||||||||||||||||||||||    
T  47295984 aaacgggtcgggccgcccgttttgacagctcta 47296016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 284 - 427
Target Start/End: Original strand, 32768387 - 32768530
Alignment:
Q  284 agcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgacc 383  Q
    ||||||| || |||||||||| || ||||| |||| ||| |||  ||||||||| |||  | |||||||||| ||||||| ||||| |||||| |||  |    
T  32768387 agcccgggagcccgtatagggccgtgctcgggctctatttttcaggcccatatttaaatcgggctttttagcccggccctcaaaagtccgttgcccgttc 32768486  T
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  32768487 gggccgggcctaaacgggccggaccgcccgttttgacagctcta 32768530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 424
Target Start/End: Complemental strand, 7137766 - 7137610
Alignment:
Q  268 tccgggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaa 367  Q
    ||||||||||  ||| | ||||| || |||||||||| |||||||   ||| |||||| |||| |||||||||||||  ||||||||| |  || |||||    
T  7137766 tccgggctggtccgttaacccgggagcccgtatagggccgggctcagactcgattatttcagcacatattcaaacaggactttttagcccaaccttaaaa 7137667  T
Q  368 agcccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagct 424  Q
    ||||| |||||||||||| |||| |||||||||| | ||||||||||||||| ||||    
T  7137666 agcccattgtccgaccggaccggacctaaacgggccaggccgcccgttttgatagct 7137610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 271 - 427
Target Start/End: Original strand, 27870297 - 27870448
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||| ||| ||| ||||||| || |||||||||| |||||||| ||||  || || | |||||||||||||| | |||||||||| ||||||| ||||||    
T  27870297 gggccggcccgtcagcccgggagcccgtatagggccgggctcgggctcattttttgcggcccatattcaaaccgggctttttagcccggcccttaaaagc 27870396  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    || |     | || || ||||||||||||||||||||||||| ||||||||||||||    
T  27870397 cctt-----ggcccggtcgggcctaaacgggtcgggccgcccattttgacagctcta 27870448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 370
Target Start/End: Complemental strand, 34858415 - 34858316
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||||||| |||||||||| ||||| |||| |||||||| |||| ||| ||||||||||||||||||||  |||||| ||| ||||||| ||||||    
T  34858415 gggctggctcgttagcccggaagcccgtacagggccgggctcgggctctatttttccagcccatattcaaacaaggcttttcagcccggcccttaaaagc 34858316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 427
Target Start/End: Original strand, 45522812 - 45522939
Alignment:
Q  295 ccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgaccgggccgggcct 394  Q
    |||||||||| |||||||| ||||  || || ||  |||||||||||| | |||||||||| ||||||| |||||||| |     | || ||||||||||    
T  45522812 ccgtatagggccgggctcgggctcattttttgcaatccatattcaaaccgggctttttagcccggcccttaaaagccctt-----ggcccggccgggcct 45522906  T
Q  395 aaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| |||||||||||||||||||||||||    
T  45522907 aaacggggcgggccgcccgttttgacagctcta 45522939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 389
Target Start/End: Original strand, 17544151 - 17544269
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  17544151 gggctggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 17544250  T
Q  371 ccgttgtccgaccgggccg 389  Q
    || | | ||| ||||||||    
T  17544251 ccttggcccggccgggccg 17544269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 270 - 427
Target Start/End: Original strand, 44341768 - 44341925
Alignment:
Q  270 cgggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaag 369  Q
    |||| |||| ||| ||||||| || |||||||||| |||||||| |||| |||||| |||||| |||| |||| | |||||| ||| ||| |||||||||    
T  44341768 cgggttggcccgttagcccgggagcccgtatagggccgggctcgggctctattatttcagcccgtatttaaaccgggcttttcagcccggtcctaaaaag 44341867  T
Q  370 cccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||  | |||   ||||||| || ||| ||||||||  ||||||||||| |||||||    
T  44341868 cccgcagcccgtttgggccggcccaaaaagggtcgggtagcccgttttgatagctcta 44341925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 271 - 393
Target Start/End: Complemental strand, 2323612 - 2323490
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| | | ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | | |||||||| || |||| ||||||    
T  2323612 gggctggcccattagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggttttttagcccgacccttaaaagc 2323513  T
Q  371 ccgttgtccgaccgggccgggcc 393  Q
    || | ||||| | ||||||||||    
T  2323512 ccttggtccggcggggccgggcc 2323490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 3409912 - 3409835
Alignment:
Q  295 ccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagccc 372  Q
    |||||||||| |||||||| |||| ||| || ||||||||||||||||   |||||||||| ||||||| ||||||||    
T  3409912 ccgtatagggccgggctcgggctctatttttgcagcccatattcaaaccaggctttttagcccggcccttaaaagccc 3409835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 41361981 - 41362060
Alignment:
Q  297 gtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttg 376  Q
    |||||||| |||||||| |||| ||||||||||||| |||| ||| || | | |||||| ||||| ||||||||||||||    
T  41361981 gtatagggccgggctcgggctcaattattccagcccttatttaaatagggatgtttagcccggccttaaaaagcccgttg 41362060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 384 - 427
Target Start/End: Complemental strand, 41882648 - 41882605
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| |||||||||| |||||||||||||||||||||||||    
T  41882648 gggccggccctaaacgggccgggccgcccgttttgacagctcta 41882605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 393
Target Start/End: Complemental strand, 1324158 - 1324060
Alignment:
Q  295 ccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgaccgggccgggcc 393  Q
    |||||||||| | | |||| |||||||| ||| ||  ||||||||||| | |||||| ||  |||||||||||||| ||||| ||||||||| ||||||    
T  1324158 ccgtatagggccagactcgggctccatttttcaagttcatattcaaaccgggcttttcagtccggccctaaaaagctcgttgcccgaccgggtcgggcc 1324060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 19823103 - 19823063
Alignment:
Q  387 ccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  19823103 ccggccctaaacgggtcggaccgcccgttttgacagctcta 19823063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 31616000 - 31615960
Alignment:
Q  387 ccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  31616000 ccggtcctaaacgggtcggtccgcccgttttgacagctcta 31615960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 427
Target Start/End: Original strand, 16624099 - 16624142
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| || ||||||| |||||||||||||||||||||||||    
T  16624099 gggccggccccaaacgggccgggccgcccgttttgacagctcta 16624142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 427
Target Start/End: Complemental strand, 52278284 - 52278249
Alignment:
Q  392 cctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||||| |||||||||||||||||||||||||||||    
T  52278284 cctaaatgggtcgggccgcccgttttgacagctcta 52278249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 393
Target Start/End: Complemental strand, 54134278 - 54134191
Alignment:
Q  306 cgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgaccgggccgggcc 393  Q
    |||||||| ||||  || || |||||||||||||||| | |||||||||| |||||||  ||||||| | | ||| ||||||||||||    
T  54134278 cgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttgaaagcccttggcccggccgggccgggcc 54134191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 428
Target Start/End: Complemental strand, 1324070 - 1324040
Alignment:
Q  398 cgggtcgggccgcccgttttgacagctctat 428  Q
    |||||||||||||||||||||||||||||||    
T  1324070 cgggtcgggccgcccgttttgacagctctat 1324040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 429
Target Start/End: Complemental strand, 26706382 - 26706352
Alignment:
Q  399 gggtcgggccgcccgttttgacagctctata 429  Q
    |||||||||||||||||||||||||||||||    
T  26706382 gggtcgggccgcccgttttgacagctctata 26706352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 373
Target Start/End: Complemental strand, 44857102 - 44857024
Alignment:
Q  295 ccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccg 373  Q
    |||||||||| ||||||| || || ||||||||||||| |||| |||| | |||| ||||| ||| ||||||| |||||    
T  44857102 ccgtatagggccgggctcaagatctattattccagcccgtatttaaaccgggcttattagcccggtcctaaaatgcccg 44857024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 427
Target Start/End: Complemental strand, 1604182 - 1604114
Alignment:
Q  359 gccctaaaaagcccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||| |||||||||||  |||  |||||||||||||||||||  ||  ||||||||||||||| ||||    
T  1604182 gcccttaaaagcccgttacccggtcgggccgggcctaaacgggctggatcgcccgttttgacagttcta 1604114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 1704558 - 1704514
Alignment:
Q  307 gggctcgagctccattattccagcccatattcaaacagagctttt 351  Q
    ||||||| |||| ||| ||||||||||||||||||||| ||||||    
T  1704558 gggctcgggctctatttttccagcccatattcaaacagggctttt 1704514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 3e-40; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 271 - 435
Target Start/End: Complemental strand, 6884402 - 6884238
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  6884402 gggctggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 6884303  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctctatatatata 435  Q
    || | | ||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  6884302 ccttggcccggccgggccgggcctaaacgggccgggccgcccgttttgacagctctaaatatata 6884238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 271 - 427
Target Start/End: Original strand, 27877816 - 27877972
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| || |||| ||||||    
T  27877816 gggctggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccgacccttaaaagc 27877915  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    || | | ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27877916 ccttggcccggccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 27877972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 271 - 427
Target Start/End: Complemental strand, 43745988 - 43745832
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  43745988 gggctggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 43745889  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    || | | ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  43745888 ccttggcccggccgggccgggcctaaacgggccgggccgcccgttttgacagctcta 43745832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 426
Target Start/End: Original strand, 33986116 - 33986271
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| || |||| || |||||||||| |||||||| |||| ||| || ||||||||||| |||| | |||||||||| ||||||| ||||||    
T  33986116 gggctggcccgttagtccgggagcccgtatagggccgggctcgggctctatttttgcagcccatattaaaaccgggctttttagcccggcccttaaaagc 33986215  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctct 426  Q
    || | | |||||||| | |  |||||||||| ||| ||||||||||||||||||||    
T  33986216 ccttggcccgaccggactgaacctaaacgggacggaccgcccgttttgacagctct 33986271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 271 - 427
Target Start/End: Original strand, 46312150 - 46312299
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||| ||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||  ||||||| ||||||    
T  46312150 gggccggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagtccggcccttaaaagc 46312249  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||| |       ||||||||||||||||||| |||||||||||||||||||||||||    
T  46312250 ccggt-------cgggccgggcctaaacgggccgggccgcccgttttgacagctcta 46312299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 427
Target Start/End: Original strand, 43736569 - 43736715
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || ||||| |||| |||||||| |||| | | ||||||||||||||||||| | |||||||||| |||||||           
T  43736569 gggctggcccgttagcccgggagcccgtaaagggccgggctcgggctctacttttccagcccatattcaaactgggctttttagcccggccct------- 43736661  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
       | | ||| ||||||||||| |||||||| |||||||||||||||||||||||||    
T  43736662 ---tggcccggccgggccgggcttaaacgggccgggccgcccgttttgacagctcta 43736715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 271 - 368
Target Start/End: Complemental strand, 26843636 - 26843539
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaa 368  Q
    |||||||| ||| ||||||| ||||||||||||| ||||||||  ||| ||| ||||||| |||||| |||| | |||||||||| ||||||||||||    
T  26843636 gggctggcccgttagcccgggagtccgtatagggccgggctcggcctctatttttccagcacatatttaaactgggctttttagcccggccctaaaaa 26843539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 373
Target Start/End: Complemental strand, 50737251 - 50737162
Alignment:
Q  284 agcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccg 373  Q
    ||||||| || ||||| |||| |||||||| |||| ||| ||||||||||||||||||| | |||||||||| ||||||| |||||||||    
T  50737251 agcccgggagcccgtaaagggccgggctcgggctctatttttccagcccatattcaaaccgggctttttagcccggcccttaaaagcccg 50737162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 50775604 - 50775693
Alignment:
Q  284 agcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccg 373  Q
    ||||||| || ||||| |||| |||||||| |||| ||| ||||||||||||||||||| | |||||||||| ||||||| |||||||||    
T  50775604 agcccgggagcccgtaaagggccgggctcgggctctatttttccagcccatattcaaaccgggctttttagcccggcccttaaaagcccg 50775693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 372
Target Start/End: Original strand, 46219389 - 46219490
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||| ||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  46219389 gggccggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 46219488  T
Q  371 cc 372  Q
    ||    
T  46219489 cc 46219490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 284 - 427
Target Start/End: Original strand, 19976428 - 19976572
Alignment:
Q  284 agcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctc-ggccctaaaaagcccgttgtccgac 382  Q
    ||||||| || |||||||||| |||||||| |||| | ||||||||| |||||| |||| | |||||||||| | ||||| |||||||||| |  |||      
T  19976428 agcccgggagcccgtatagggccgggctcgggctctaatattccagcacatatttaaactgggctttttagccccggcccgaaaaagcccgcttcccgtt 19976527  T
Q  383 cgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||||||  || ||||||  ||||  |||||||||||||||||||    
T  19976528 cgggccgacccgaaacggaccgggtagcccgttttgacagctcta 19976572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 385 - 431
Target Start/End: Complemental strand, 1459774 - 1459728
Alignment:
Q  385 ggccgggcctaaacgggtcgggccgcccgttttgacagctctatata 431  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||    
T  1459774 ggccggccctaaacgggtcgggccgcccgttttaacagctctatata 1459728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 51884806 - 51884762
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctctat 428  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||    
T  51884806 gggccggccctaaacggatcgggccgcccgttttgacagctctat 51884762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 384 - 427
Target Start/End: Complemental strand, 29522296 - 29522253
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||    
T  29522296 gggccggccctaaacgggtcgggccgcccattttgacagctcta 29522253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 284 - 361
Target Start/End: Complemental strand, 21075688 - 21075611
Alignment:
Q  284 agcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggcc 361  Q
    ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| |||||    
T  21075688 agcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcc 21075611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 24311736 - 24311788
Alignment:
Q  285 gcccggaagtccgtatagggacgggctcgagctccattattccagcccatatt 337  Q
    ||||||||| |||||||||| ||||||||||||| |||||| |||||| ||||    
T  24311736 gcccggaagcccgtatagggtcgggctcgagctctattatttcagcccgtatt 24311788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 427
Target Start/End: Original strand, 36638698 - 36638741
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| |||||||||| ||| |||||||||||||||||||||    
T  36638698 gggccggccctaaacgggccggaccgcccgttttgacagctcta 36638741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 427
Target Start/End: Complemental strand, 48912786 - 48912743
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| |||||||||| ||||||||||||||||| |||||||    
T  48912786 gggccggccctaaacgggccgggccgcccgttttgatagctcta 48912743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 427
Target Start/End: Original strand, 49507962 - 49508005
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| |||| ||||| |||||||||||||||||||||||||    
T  49507962 gggccggccctagacgggccgggccgcccgttttgacagctcta 49508005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 427
Target Start/End: Complemental strand, 9300551 - 9300523
Alignment:
Q  399 gggtcgggccgcccgttttgacagctcta 427  Q
    |||||||||||||||||||||||||||||    
T  9300551 gggtcgggccgcccgttttgacagctcta 9300523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 14740517 - 14740477
Alignment:
Q  387 ccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||| |||||| |||||| ||||||||||||||||||||||    
T  14740517 ccggccctaaatgggtcgtgccgcccgttttgacagctcta 14740477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 35603323 - 35603283
Alignment:
Q  387 ccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||| ||||||||||  ||||||||||||||||||||||||    
T  35603323 ccggtcctaaacgggctgggccgcccgttttgacagctcta 35603283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 427
Target Start/End: Complemental strand, 41208869 - 41208841
Alignment:
Q  399 gggtcgggccgcccgttttgacagctcta 427  Q
    |||||||||||||||||||||||||||||    
T  41208869 gggtcgggccgcccgttttgacagctcta 41208841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 7e-38; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 271 - 427
Target Start/End: Original strand, 10993591 - 10993747
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  10993591 gggctggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 10993690  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    || | | ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  10993691 ccttggcccggccgggccgggcctaaacgggccgggccgcccgttttgacagctcta 10993747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 270 - 427
Target Start/End: Original strand, 35710574 - 35710731
Alignment:
Q  270 cgggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaag 369  Q
    ||||||||| ||| ||||||| || |||||||||| |||||||| |||| ||||||||||||| |||| ||| || |||||||||| |||||||||||||    
T  35710574 cgggctggcccgttagcccgggagcccgtatagggccgggctcgggctcaattattccagcccttatttaaatagggctttttagcccggccctaaaaag 35710673  T
Q  370 cccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||  |||    | |||| || ||||||| ||||  |||||||||||||||||||    
T  35710674 cccgttacccgtttagcccggcccgaaacgggccgggtagcccgttttgacagctcta 35710731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 16526532 - 16526624
Alignment:
Q  335 attcaaacagagctttttagctcggccctaaaaagcccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||||||| | |||||||||| ||||||| |||||||| | | ||| |||||||||||||||||||| |||||||||| ||||||||||||||    
T  16526532 attcaaaccgggctttttagcccggcccttaaaagcccttggcccggccgggccgggcctaaacgggccgggccgcccattttgacagctcta 16526624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 285 - 427
Target Start/End: Original strand, 7505873 - 7506015
Alignment:
Q  285 gcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgaccg 384  Q
    |||||| || |||||||||| || ||||| |||| | ||||||||||| |||| |||||| |||||||||| |||| | ||||| |||| || |||  ||    
T  7505873 gcccgggagcccgtatagggccgagctcgggctctaatattccagcccgtatttaaacagggctttttagcccggctcgaaaaaacccgctgcccgttcg 7505972  T
Q  385 ggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||||| || ||||||| ||||  |||||||||||||||||||    
T  7505973 ggccggcccgaaacggggcgggtagcccgttttgacagctcta 7506015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 427
Target Start/End: Complemental strand, 17471426 - 17471288
Alignment:
Q  284 agcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgacc 383  Q
    ||||||| |||||||| |||| |||||||| |||| ||| ||||| || |||||||||| |  ||||||||| ||||||| |||||||| | | |||       
T  17471426 agcccgggagtccgtaaagggccgggctcgggctctatttttccaacctatattcaaaccggactttttagcccggcccttaaaagcccttggcccg--- 17471330  T
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
      |||||||||||| |||  ||||||||||||||||||||||||    
T  17471329 --gccgggcctaaaagggcagggccgcccgttttgacagctcta 17471288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 427
Target Start/End: Original strand, 17581788 - 17581926
Alignment:
Q  284 agcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgacc 383  Q
    ||||||| |||||||| |||| |||||||| |||| ||| ||||| || |||||||||| |  ||||||||| ||||||| |||||||| | | |||       
T  17581788 agcccgggagtccgtaaagggccgggctcgggctctatttttccaacctatattcaaaccggactttttagcccggcccttaaaagcccttggcccg--- 17581884  T
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
      |||||||||||| |||  ||||||||||||||||||||||||    
T  17581885 --gccgggcctaaaagggcagggccgcccgttttgacagctcta 17581926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 427
Target Start/End: Complemental strand, 39489076 - 39489006
Alignment:
Q  357 cggccctaaaaagcccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| |||||||| | | ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  39489076 cggcccttaaaagcccttggcccggccgggccgggcctaaacgggccgggccgcccgttttgacagctcta 39489006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 389
Target Start/End: Original strand, 1873931 - 1874049
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||| ||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  1873931 gggccggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 1874030  T
Q  371 ccgttgtccgaccgggccg 389  Q
    || | | ||| ||||||||    
T  1874031 ccttggcccggccgggccg 1874049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 372
Target Start/End: Original strand, 23025448 - 23025549
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||| ||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  23025448 gggccggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 23025547  T
Q  371 cc 372  Q
    ||    
T  23025548 cc 23025549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 427
Target Start/End: Complemental strand, 40921284 - 40921241
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  40921284 gggccggccctaaacgggtcgggccgcccgttttgacagctcta 40921241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 4267655 - 4267732
Alignment:
Q  295 ccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagccc 372  Q
    ||||| |||| |||||||| |||| ||| ||||||||||||||||||| | |||||||||| || |||| ||||||||    
T  4267655 ccgtaaagggccgggctcgggctctatttttccagcccatattcaaaccgggctttttagcccgacccttaaaagccc 4267732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 368
Target Start/End: Original strand, 49113342 - 49113439
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaa 368  Q
    |||||||| ||| ||||||| || ||||| |||| |||||||| |||| ||| ||||||||||||||||||| |   |||||||| ||||||| ||||    
T  49113342 gggctggcccgttagcccgggagcccgtaaagggccgggctcgggctctatttttccagcccatattcaaaccggattttttagcccggcccttaaaa 49113439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 354
Target Start/End: Original strand, 41202597 - 41202680
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttag 354  Q
    |||||||| ||| ||||||| ||  |||| |||| |||||||| |||| ||| ||||||||||||||||||| | |||||||||    
T  41202597 gggctggcccgttagcccgggagctcgtaaagggccgggctcgggctctatttttccagcccatattcaaaccgggctttttag 41202680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 337
Target Start/End: Original strand, 19106601 - 19106668
Alignment:
Q  270 cgggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatatt 337  Q
    |||| |||| ||| ||||||| || |||||||||  |||||||| |||| ||||||||||||||||||    
T  19106601 cgggatggcccgttagcccgggagcccgtataggaccgggctcgggctcaattattccagcccatatt 19106668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 18833724 - 18833680
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctctat 428  Q
    ||||||| |||| ||||| | ||||||||||||||||||||||||    
T  18833724 gggccggccctacacgggccaggccgcccgttttgacagctctat 18833680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 427
Target Start/End: Original strand, 31325980 - 31326020
Alignment:
Q  387 ccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||| ||||||| |||||||||||||||||||||| |||||    
T  31325980 ccggccctaaactggtcgggccgcccgttttgacaactcta 31326020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 427
Target Start/End: Original strand, 33889806 - 33889846
Alignment:
Q  387 ccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||| |||||| ||||||||||||||||||||||| |||||    
T  33889806 ccggccctaaatgggtcgggccgcccgttttgacaactcta 33889846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 7e-38; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 271 - 427
Target Start/End: Original strand, 21104290 - 21104446
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  21104290 gggctggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 21104389  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    || | | ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  21104390 ccttggcccggccgggccgggcctaaacgggccgggccgcccgttttgacagctcta 21104446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 270 - 393
Target Start/End: Complemental strand, 26555955 - 26555832
Alignment:
Q  270 cgggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaag 369  Q
    ||||||||| ||| ||||||| || | |||||||| |||||||| ||||||||||| ||||||||||| |||||| |||||||||| |||||||||||||    
T  26555955 cgggctggcccgttagcccgggagcctgtatagggccgggctcgggctccattatttcagcccatatttaaacagggctttttagcccggccctaaaaag 26555856  T
Q  370 cccgttgtccgaccgggccgggcc 393  Q
    ||||||||||||||||||||||||    
T  26555855 cccgttgtccgaccgggccgggcc 26555832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 271 - 427
Target Start/End: Complemental strand, 15613461 - 15613306
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || |||||||||| |||||||| |||| ||| ||   ||||||||| |||| | | |||| ||| ||||||| ||||||    
T  15613461 gggctggcccgttagcccgggagcccgtatagggccgggctcgggctctattttttaggcccatatttaaaccgggatttt-agcccggccctcaaaagc 15613363  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||||| |||  ||||||| |||||||||||||||||||||||||||||||||||||    
T  15613362 ccgttgcccgttcgggccgagcctaaacgggtcgggccgcccgttttgacagctcta 15613306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 270 - 393
Target Start/End: Complemental strand, 4470022 - 4469899
Alignment:
Q  270 cgggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaag 369  Q
    ||||||||| ||| ||||||| || |||||||||| |||||||| ||||||||||| ||| ||||||||||||||| ||||||||| ||| |||||||||    
T  4470022 cgggctggcccgttagcccgggagcccgtatagggccgggctcgggctccattatttcagtccatattcaaacagatctttttagcccgggcctaaaaag 4469923  T
Q  370 cccgttgtccgaccgggccgggcc 393  Q
    |  |||| ||||| ||||||||||    
T  4469922 catgttgcccgactgggccgggcc 4469899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 429
Target Start/End: Complemental strand, 15560377 - 15560243
Alignment:
Q  295 ccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgaccgggccgggcct 394  Q
    |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||| | ||||||| |||| ||| | | ||| ||||||||| |||    
T  15560377 ccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttaacccggcccttaaaatcccttggcccggccgggccggacct 15560278  T
Q  395 aaacgggtcgggccgcccgttttgacagctctata 429  Q
    ||||||| |||||||||||||||||||||||||||    
T  15560277 aaacgggccgggccgcccgttttgacagctctata 15560243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 271 - 421
Target Start/End: Original strand, 17921483 - 17921632
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||| | || ||| | |||| |||||||| |||| ||| |||||||||||||||||||   |||||||||| ||||||| ||||||    
T  17921483 gggctggcccgttagcccaggagcccgcaaagggccgggctcgggctctatt-ttccagcccatattcaaaccaggctttttagcccggcccttaaaagc 17921581  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgaca 421  Q
    || | |  || || ||||||||||||||||| |||||||||||||||||||    
T  17921582 ccttggctcggccaggccgggcctaaacgggccgggccgcccgttttgaca 17921632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 284 - 427
Target Start/End: Complemental strand, 20922030 - 20921886
Alignment:
Q  284 agcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagcttttt-agctcggccctaaaaagcccgttgtccgac 382  Q
    ||||||| ||||||||||||| ||  |||| |||| |||||||||||||||||| |||| | ||||||| |||||||||| |||||||  |||  ||       
T  20922030 agcccgggagtccgtatagggccgcactcgggctcaattattccagcccatatttaaaccgggctttttcagctcggcccaaaaaagcttgttacccagt 20921931  T
Q  383 cgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    | |||||||||||| || ||| |||||||||||||||||||||||    
T  20921930 caggccgggcctaagcgagtctggccgcccgttttgacagctcta 20921886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 392
Target Start/End: Complemental strand, 42730173 - 42730052
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| |||| |||||  |||| |||| |||||||| |||| ||| || |||||||||||||||||| |||||| ||| ||||||| ||||||    
T  42730173 gggctggcccgttagcctggaagcacgtacagggccgggctcgggctctattttttcagcccatattcaaacagggcttttcagcccggcccttaaaagc 42730074  T
Q  371 ccgttgtccgaccgggccgggc 392  Q
    |||||  |||| ||||||||||    
T  42730073 ccgttacccgatcgggccgggc 42730052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 271 - 427
Target Start/End: Complemental strand, 38837439 - 38837283
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || |||||||||| |||||||| |||| |||||| |||||  |||| |||| | |||||||||| |||||||||||||     
T  38837439 gggctggcccgttagcccgggagcccgtatagggccgggctcgggctctattatttcagcctgtatttaaaccgggctttttagcccggccctaaaaagt 38837340  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    | |  | ||| || |||||| || ||||||| ||||  |||| ||||||||||||||    
T  38837339 ctgaagcccgtccaggccggcccgaaacgggccgggtagcccattttgacagctcta 38837283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 40860840 - 40860731
Alignment:
Q  284 agcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgacc 383  Q
    ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| |||||||| | | ||| ||    
T  40860840 agcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagcccttggcccggcc 40860741  T
Q  384 gggccgggcc 393  Q
    ||||||||||    
T  40860740 gggccgggcc 40860731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 393
Target Start/End: Complemental strand, 29205808 - 29205686
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| ||  ||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  29205808 gggctggcccgttagcccgggagctcgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 29205709  T
Q  371 ccgttgtccgaccgggccgggcc 393  Q
    || | | | | ||||||||||||    
T  29205708 ccttggccgggccgggccgggcc 29205686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 284 - 372
Target Start/End: Complemental strand, 40000595 - 40000507
Alignment:
Q  284 agcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagccc 372  Q
    ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||||    
T  40000595 agcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagccc 40000507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 389
Target Start/End: Original strand, 25096569 - 25096687
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattc-cagcccatattcaaacagagctttttagctcggccctaaaaag 369  Q
    |||| ||| ||| ||||||| || |||||||||| |||||||| |||| ||||||  |||||||||||||||| | |||||||||| ||||||| |||||    
T  25096569 gggccggcccgttagcccgggagcccgtatagggccgggctcgggctc-attatttgcagcccatattcaaaccgggctttttagcccggcccttaaaag 25096667  T
Q  370 cccgttgtccgaccgggccg 389  Q
    ||| | | ||| ||||||||    
T  25096668 cccttggcccggccgggccg 25096687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 372
Target Start/End: Original strand, 9471630 - 9471731
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||| | ||| ||||||| || ||||| |||| |||||||| |||| ||| || |||||||||||||||| | |||||||||| ||| ||| ||||||    
T  9471630 gggctgccccgttagcccgggagcccgtaaagggccgggctcgggctctattttttcagcccatattcaaactgggctttttagcccgggccttaaaagc 9471729  T
Q  371 cc 372  Q
    ||    
T  9471730 cc 9471731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 432
Target Start/End: Original strand, 30556239 - 30556287
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctctatatat 432  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  30556239 gggccggccctaaacgggccgggccgcccgttttgacaactctatatat 30556287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 384 - 427
Target Start/End: Original strand, 10710422 - 10710465
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| |||||||||| |||||||||||||||||||||||||    
T  10710422 gggccggccctaaacgggccgggccgcccgttttgacagctcta 10710465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 368
Target Start/End: Original strand, 38571366 - 38571464
Alignment:
Q  270 cgggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaa 368  Q
    ||||||||| ||| || |||  || |||||||||| ||||||||||||| |||||| |||||| |||| |||  | |||||||||| | ||||||||||    
T  38571366 cgggctggcccgttagtccgagagcccgtatagggccgggctcgagctctattattacagcccgtatttaaatcgggctttttagcccagccctaaaaa 38571464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 427
Target Start/End: Complemental strand, 19944273 - 19944238
Alignment:
Q  392 cctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| ||||||||||||||||||||||||||||    
T  19944273 cctaaacaggtcgggccgcccgttttgacagctcta 19944238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 427
Target Start/End: Complemental strand, 25868414 - 25868379
Alignment:
Q  392 cctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||||||||||||||||||||||||||||| |||||    
T  25868414 cctaaacgggtcgggccgcccgttttgacaactcta 25868379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 427
Target Start/End: Complemental strand, 1345761 - 1345733
Alignment:
Q  399 gggtcgggccgcccgttttgacagctcta 427  Q
    |||||||||||||||||||||||||||||    
T  1345761 gggtcgggccgcccgttttgacagctcta 1345733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 428
Target Start/End: Complemental strand, 12847339 - 12847303
Alignment:
Q  392 cctaaacgggtcgggccgcccgttttgacagctctat 428  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  12847339 cctaaacgggtcgggccacccgttttgacatctctat 12847303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 271 - 427
Target Start/End: Complemental strand, 9936 - 9780
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || ||| | |||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  9936 gggctggcccgttagcccgggagcccgaagagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 9837  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    || | | ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  9836 ccttggcccggccgggccgggcctaaacgggccgggccgcccgttttgacagctcta 9780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 1e-30; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 271 - 427
Target Start/End: Original strand, 26519856 - 26520012
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| |  |||||||||| |||||||| |||| ||| || |||||||||||||||| | ||||||| || ||||||| ||||||    
T  26519856 gggctggcccgttagcccgggaacccgtatagggtcgggctcgggctctatttttgcagcccatattcaaactgggctttttcgcccggcccttaaaagc 26519955  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    || | | ||| |||||||||||||||||||| | |||| ||||||||||||||||||    
T  26519956 ccttggcccggccgggccgggcctaaacgggccaggccacccgttttgacagctcta 26520012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 271 - 427
Target Start/End: Complemental strand, 11369359 - 11369202
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattc-cagcccatattcaaacagagctttttagctcggccctaaaaag 369  Q
    |||| ||| ||| ||||||| || |||||||||| |||||||| ||||  || ||  |||||||||||||||| | |||||||||| ||||||| |||||    
T  11369359 gggccggcccgttagcccgggagcccgtatagggccgggctcgggctcatttttttgcagcccatattcaaaccgggctttttagcccggcccttaaaag 11369260  T
Q  370 cccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||| | | ||| ||||||| |||||||||||| |||||||||||||||||||||||||    
T  11369259 cccttggcccggccgggccaggcctaaacgggccgggccgcccgttttgacagctcta 11369202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 271 - 427
Target Start/End: Original strand, 15071092 - 15071248
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||| ||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  15071092 gggccggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 15071191  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    || | | |||  | ||||| ||||||||||  |||||||||||||||||||||||||    
T  15071192 ccttggcccggtccggccgagcctaaacggaccgggccgcccgttttgacagctcta 15071248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 270 - 427
Target Start/End: Complemental strand, 31655009 - 31654852
Alignment:
Q  270 cgggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccata-ttcaaacagagctttttagctcggccctaaaaa 368  Q
    ||||||||| ||| ||||||| || |||||||||| |||||||| |||| |||||||||||||||| || |||| | ||||||| || |||||||||| |    
T  31655009 cgggctggcccgttagcccgggagcccgtatagggccgggctcgggctcaattattccagcccatattttaaaccgggctttttggcccggccctaaata 31654910  T
Q  369 gcccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||||    |||||| ||||||||| ||||||| ||||  |||||||||||||||||||    
T  31654909 gcccgcaacccgacc-ggccgggccgaaacgggccgggtagcccgttttgacagctcta 31654852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 324 - 427
Target Start/End: Original strand, 3045029 - 3045132
Alignment:
Q  324 ttccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagc 423  Q
    |||||||||||||||||||||||||||| ||| ||||||| |||||||||||  |||   |||| |||||| |||||||||||||  |||||||||||||    
T  3045029 ttccagcccatattcaaacagagcttttcagcccggcccttaaaagcccgttacccggttgggctgggcctgaacgggtcgggccttccgttttgacagc 3045128  T
Q  424 tcta 427  Q
    ||||    
T  3045129 tcta 3045132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 430
Target Start/End: Complemental strand, 12075940 - 12075818
Alignment:
Q  308 ggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgaccgggccgggcctaaacgggtcgggc 407  Q
    |||||| |||| ||| ||| ||||||||||||||| | |||||||||| || |||| |||||||| | | | | || ||||||||||||||||  |||||    
T  12075940 ggctcgggctctatttttctagcccatattcaaaccgggctttttagcccgacccttaaaagcccttggcctggcccggccgggcctaaacggaccgggc 12075841  T
Q  408 cgcccgttttgacagctctatat 430  Q
    |||||||||||||||||||||||    
T  12075840 cgcccgttttgacagctctatat 12075818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 427
Target Start/End: Complemental strand, 12271518 - 12271376
Alignment:
Q  285 gcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgaccg 384  Q
    |||||| || ||||| |||| |||||||| |||| ||| || |||||||||||||||| |  ||||||||| ||| ||| |||||||| | | ||    |    
T  12271518 gcccgggagcccgtaaagggccgggctcgggctctattttttcagcccatattcaaaccggactttttagcccggtccttaaaagcccttggcccagttg 12271419  T
Q  385 ggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||    
T  12271418 ggccgggcctaaatgggccgggccgcccattttgacagctcta 12271376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 270 - 373
Target Start/End: Complemental strand, 17878335 - 17878232
Alignment:
Q  270 cgggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaag 369  Q
    ||||||||| ||| ||||||| || |||||||||  ||| |||  |||| ||||||||||||| |||| ||| || |||||||||| |||||||||||||    
T  17878335 cgggctggcccgttagcccgggagcccgtataggaccggactcaggctctattattccagcccgtatttaaatagggctttttagcccggccctaaaaag 17878236  T
Q  370 cccg 373  Q
    ||||    
T  17878235 cccg 17878232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 373
Target Start/End: Complemental strand, 17868551 - 17868449
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || |||||||||  ||| |||  |||| ||||||||||||| |||| ||| || |||||||||| ||||||||||||||    
T  17868551 gggctggcccgttagcccgggagcccgtataggaccggactcaggctctattattccagcccgtatttaaatagggctttttagcccggccctaaaaagc 17868452  T
Q  371 ccg 373  Q
    |||    
T  17868451 ccg 17868449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 362
Target Start/End: Complemental strand, 31471066 - 31470975
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccc 362  Q
    |||||||| ||| ||||||| || |||||||||| |||||||| |||| ||| || |||||||||||||||  | |||||||||| ||||||    
T  31471066 gggctggcccgttagcccgggagcccgtatagggccgggctcgggctctatttttgcagcccatattcaaatcgggctttttagcccggccc 31470975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 284 - 426
Target Start/End: Complemental strand, 27965917 - 27965775
Alignment:
Q  284 agcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgacc 383  Q
    ||||||| || || ||||||| || ||||| |||| | ||||||||||| |||| |||| | |||||||||| |||||| |||||||||| || |||  |    
T  27965917 agcccgggagcccatatagggccgtgctcgggctctaatattccagcccgtatttaaaccgggctttttagcccggcccaaaaaagcccgctgcccgttc 27965818  T
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctct 426  Q
    |||| || ||  |||||  ||||  ||||||||||||||||||    
T  27965817 gggctggcccggaacggaccgggtagcccgttttgacagctct 27965775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 10998049 - 10998126
Alignment:
Q  295 ccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagccc 372  Q
    |||||||||| |||||||| ||||  || || |||||||||||||||| |  ||||||||| ||||||| ||||||||    
T  10998049 ccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccggactttttagcccggcccttaaaagccc 10998126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 427
Target Start/End: Complemental strand, 32464906 - 32464863
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| |||||||||||||||||  |||||||||||||||||    
T  32464906 gggccggccctaaacgggtcgggccatccgttttgacagctcta 32464863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 1e-27; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 284 - 427
Target Start/End: Original strand, 33189324 - 33189467
Alignment:
Q  284 agcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgacc 383  Q
    ||||||| || |||||||||| |||||||| ||||  || || ||||||||||| ||||   |||||||||| ||||||| |||||||| | | ||| ||    
T  33189324 agcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatatttaaacctggctttttagcccggcccttaaaagcccttggcccggcc 33189423  T
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  33189424 gggccgggcctaaacgggctgggccgcccgttttgacagctcta 33189467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 271 - 427
Target Start/End: Original strand, 4221851 - 4222007
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||| ||| || |||||||||| |||||||| |||| ||| |||||||||||||| |||| | |||||||||| ||||||||||||||    
T  4221851 gggctggcccgttagctcgggagcccgtatagggccgggctcgggctctatttttccagcccatatttaaaccgggctttttagcccggccctaaaaagc 4221950  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    || |   ||   |||||| ||| |||||||||||| ||| |||||||||||||||||    
T  4221951 ccttgcccccgtcgggcccggcttaaacgggtcggcccgtccgttttgacagctcta 4222007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 271 - 427
Target Start/End: Complemental strand, 9660639 - 9660488
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||| ||| ||| ||||||| || |||||||||| |||||||| ||||  || || |||||||||||||||| | |||||||||| |  |||| ||||||    
T  9660639 gggccggcccgttagcccgggagcccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccaacccttaaaagc 9660540  T
Q  371 ccgttgtccgaccgggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    || |     | || ||||||||||||||||| |||||||||||||||||||||||||    
T  9660539 cctt-----ggcccggccgggcctaaacgggccgggccgcccgttttgacagctcta 9660488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 265 - 373
Target Start/End: Complemental strand, 43263282 - 43263174
Alignment:
Q  265 acatccgggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggcccta 364  Q
    |||| ||||||||| | | ||||||| || |||||||||| ||||||||||||| |||||| |||||| |||| |||| | |||||||||  ||||||||    
T  43263282 acatgcgggctggcccattagcccgggagcccgtatagggccgggctcgagctctattatttcagcccgtatttaaaccgggctttttagtccggcccta 43263183  T
Q  365 aaaagcccg 373  Q
    |||||||||    
T  43263182 aaaagcccg 43263174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 393
Target Start/End: Original strand, 46158358 - 46158480
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || |||||||||| |||||||| |||| ||| |||  ||||||||| |||| | |||||||||| ||||||| ||||||    
T  46158358 gggctggcccgttagcccgggagcccgtatagggccgggctcgggctctatttttcaggcccatatttaaaccgggctttttagcccggccctcaaaagc 46158457  T
Q  371 ccgttgtccgaccgggccgggcc 393  Q
    ||||||  ||  |||||||||||    
T  46158458 ccgttgctcgttcgggccgggcc 46158480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 427
Target Start/End: Original strand, 45566573 - 45566693
Alignment:
Q  306 cgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgaccgggccgggcctaaacgggtcgg 405  Q
    |||||||| |||| ||| ||| ||||||||||||||| | |||||||||| ||||||| |||||||  | | ||| || |||| |||||||||||| |||    
T  45566573 cgggctcgggctctatttttc-agcccatattcaaaccgggctttttagcccggcccttaaaagccattggcccggcccggccaggcctaaacgggccgg 45566671  T
Q  406 gccgcccgttttgacagctcta 427  Q
     ||| ||||||| |||||||||    
T  45566672 accgtccgtttttacagctcta 45566693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 372
Target Start/End: Complemental strand, 45757055 - 45756955
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||| ||| ||| ||||||| || |||||||||| |||||||| |||| ||| || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  45757055 gggccggcccgttagcccgggagcccgtatagggccgggctcgggctc-atttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 45756957  T
Q  371 cc 372  Q
    ||    
T  45756956 cc 45756955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 427
Target Start/End: Original strand, 32058150 - 32058282
Alignment:
Q  295 ccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgaccgggccgggcct 394  Q
    ||||| |||| |||||||| | || | | |||||| |||||||||||| |  ||||||||| || |||| |||||||| |   |||  |||||||||| |    
T  32058150 ccgtaaagggccgggctcgggttctacttttccagtccatattcaaactggactttttagcccgacccttaaaagcccttgacccggtcgggccgggctt 32058249  T
Q  395 aaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| |||| ||||||||||||||||||||    
T  32058250 aaacgggccggggcgcccgttttgacagctcta 32058282  T

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Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 271 - 393
Target Start/End: Original strand, 12749875 - 12749997
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||||| || ||| | |||| |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| ||||||    
T  12749875 gggctggcccgttagcccgggagcccgaagagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagc 12749974  T
Q  371 ccgttgtccgaccgggccgggcc 393  Q
    || | | |||  |||||||||||    
T  12749975 ccttggcccggtcgggccgggcc 12749997  T

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Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 271 - 389
Target Start/End: Original strand, 17332081 - 17332198
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagc 370  Q
    |||||||| ||| ||||| | || ||||| |||| |||||||| |||| ||| ||||| ||||||||||||| | |||||||||| ||||||| ||||||    
T  17332081 gggctggcccgttagcccaggagcccgtaaagggccgggctcgggctctatttttccaacccatattcaaaccg-gctttttagcccggcccttaaaagc 17332179  T
Q  371 ccgttgtccgaccgggccg 389  Q
    || | | ||| ||||||||    
T  17332180 ccttggcccggccgggccg 17332198  T

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Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 43780973 - 43780864
Alignment:
Q  284 agcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagctcggccctaaaaagcccgttgtccgacc 383  Q
    ||||||| || |||||||| | |||||||| ||||  || || |||||||||||||||| | |||||||||| ||||||| |||||||| | | ||| ||    
T  43780973 agcccgggagcccgtatagagccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagcccggcccttaaaagcccttggcccggcc 43780874  T
Q  384 gggccgggcc 393  Q
     |||||||||    
T  43780873 aggccgggcc 43780864  T

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Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 401
Target Start/End: Complemental strand, 31488946 - 31488814
Alignment:
Q  270 cgggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccata-ttcaaacagagctttttagctcggccctaaaaa 368  Q
    ||||||||| ||| ||||||| || |||||||||| |||| || ||||| |||||||||||||||| || |||| |  ||||||  | | ||||||||||    
T  31488946 cgggctggcccgttagcccgggagcccgtatagggccgggttcaagctcaattattccagcccatattttaaaccggactttttgacccagccctaaaaa 31488847  T
Q  369 gcccgttgtccgaccgggccgggcctaaacggg 401  Q
     ||||    |||||||||||||||| |||||||    
T  31488846 acccgcaacccgaccgggccgggccgaaacggg 31488814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 280 - 355
Target Start/End: Original strand, 6502012 - 6502087
Alignment:
Q  280 cgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagc 355  Q
    ||||||||||| |||||||| |||| ||| |||| |||| ||| ||||||||||||||||||| |  |||||||||    
T  6502012 cgtaagcccgggagtccgtaaagggccggactcgggctctatttttccagcccatattcaaaccggactttttagc 6502087  T

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Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 23973680 - 23973640
Alignment:
Q  387 ccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  23973680 ccggccctaaacgggccgggccgcccgttttgacagctcta 23973640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 355
Target Start/End: Complemental strand, 47188361 - 47188277
Alignment:
Q  271 gggctggctcgtaagcccggaagtccgtatagggacgggctcgagctccattattccagcccatattcaaacagagctttttagc 355  Q
    |||||||| ||| ||||||| |  |||||||||| |||||||| ||||  || || |||||||||||||||| | ||||||||||    
T  47188361 gggctggcccgttagcccgggaacccgtatagggccgggctcgggctcattttttgcagcccatattcaaaccgggctttttagc 47188277  T

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Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 427
Target Start/End: Original strand, 700561 - 700604
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| |||||||||| |||| ||||||||||||||||||||    
T  700561 gggccggccctaaacgggccgggtcgcccgttttgacagctcta 700604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 28472851 - 28472822
Alignment:
Q  399 gggtcgggccgcccgttttgacagctctat 428  Q
    ||||||||||||||||||||||||||||||    
T  28472851 gggtcgggccgcccgttttgacagctctat 28472822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 429
Target Start/End: Complemental strand, 50511466 - 50511429
Alignment:
Q  392 cctaaacgggtcgggccgcccgttttgacagctctata 429  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  50511466 cctaaacgggccggaccgcccgttttgacagctctata 50511429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 427
Target Start/End: Original strand, 21720446 - 21720486
Alignment:
Q  387 ccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||| |||||||||| ||| |||||||||||||||||||||    
T  21720446 ccggccctaaacgggccggtccgcccgttttgacagctcta 21720486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 427
Target Start/End: Original strand, 27415615 - 27415655
Alignment:
Q  387 ccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    |||| |||||||||||||| ||| |||||||||||||||||    
T  27415615 ccggtcctaaacgggtcggaccgtccgttttgacagctcta 27415655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 40412024 - 40411980
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctctat 428  Q
    ||||||| | |||||||| ||| ||||||||||||||||||||||    
T  40412024 gggccggccataaacgggccggaccgcccgttttgacagctctat 40411980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 427
Target Start/End: Original strand, 51811 - 51854
Alignment:
Q  384 gggccgggcctaaacgggtcgggccgcccgttttgacagctcta 427  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  51811 gggccggccctaaacgggtcgggccgcccgttttgacagctcta 51854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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