View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9361_low_17 (Length: 290)
Name: NF9361_low_17
Description: NF9361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9361_low_17 |
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Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 15 - 273
Target Start/End: Original strand, 6967678 - 6967936
Alignment:
| Q |
15 |
tgtttatttgggctatgattcaaagttattgtcctcatcaagttcatgcactcattgagaaattctcagagaaattagccaacttttgttacccttttgt |
114 |
Q |
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| T |
6967678 |
tgtttatttgggctatgattcaaagttattgtcctcatcaagttcatgcactcattgagaaattctcagagaaattagccaacttttgttacccttttgt |
6967777 |
T |
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| Q |
115 |
tgaggttagattctttgagaacattggtgattatatgagaaccaatgaagctttcttatacattggaaactacttaacatctaaatcaaccaaccaagca |
214 |
Q |
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| T |
6967778 |
tgaggttagattctttgagaacattggtgattatatgagaaccaatgaagctttcttatacattgaaaactacttaacatctaaatcaaccaaccaagca |
6967877 |
T |
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| Q |
215 |
aagaaactccaaggtgaatatgtgagaaagtctttagttctaaagatggatgaaagaca |
273 |
Q |
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| T |
6967878 |
aagaaactccaaggtgaatatgtgagaaagtctttagttctaaagatggatgaaagaca |
6967936 |
T |
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