View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9361_low_19 (Length: 279)
Name: NF9361_low_19
Description: NF9361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9361_low_19 |
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Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 19 - 265
Target Start/End: Complemental strand, 2065194 - 2064950
Alignment:
| Q |
19 |
atcagagcctaaccagcatgcatatacaaactttgactcatacatcttctggattttctgctgccatactggtggtatgagtatgattgagcatgtcaca |
118 |
Q |
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| T |
2065194 |
atcagagcctaaccagcatgcatatacaaactttgactcatacatcttctggattttctgctgccatactggtggtatgagtatgattgagcatgtcaca |
2065095 |
T |
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| Q |
119 |
gatatactggtccaacacaacttgagtgtgagcctcagttccaagaacacaacatgccttaacttgattccaagaaataatgtacattcacttagattta |
218 |
Q |
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| T |
2065094 |
gatattctggtccaacacaactt--gtgtgagcttcagttccaagaacacaacatgccttaacttgattccaagaaataatgtacattcacttagattta |
2064997 |
T |
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| Q |
219 |
ttcaatagtcaaatttaagtgatgaactaataacgcaaatcgaaagt |
265 |
Q |
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| T |
2064996 |
ttcaatagtcaaatttaagtgatgaactaataacgcaaatcgaaagt |
2064950 |
T |
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