View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9362_low_3 (Length: 298)
Name: NF9362_low_3
Description: NF9362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9362_low_3 |
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Alignment Details
Target: chr3 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 19 - 287
Target Start/End: Original strand, 51933693 - 51933961
Alignment:
| Q |
19 |
tttatggggtccaagatttcagatgggactccatctattgctgttgggatctcaagcccaaacacttcagttttaatgtatttcgcattcaagagactgc |
118 |
Q |
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| T |
51933693 |
tttatggggtccaagatttcagatgggactccatctattgctgttgggatctcaagcccaaacacttcagttttaatgtatttcgcattcaagagacagc |
51933792 |
T |
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| Q |
119 |
cagaatgaatggcatcaatgattttcctcgtgtacgctaacttgatccgattgcctgatccataactgccaaattacagggaagaaaaattagttttagt |
218 |
Q |
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| T |
51933793 |
cagaatgaatggcatcaatgattttcctcgtgtacgctaacttgatccgattgcctgatccataactgccaaattacagggaagaaaaattagttttagt |
51933892 |
T |
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| Q |
219 |
gaggaaaaaactaccatatatgcagttgcattgttagagttcacaccttccccctgaccagccagtatt |
287 |
Q |
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| T |
51933893 |
gaggaaaaaactaccatatatgcagttgcattgttagagttcacaccttccccctgaccagccagtatt |
51933961 |
T |
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