View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9363_high_9 (Length: 312)
Name: NF9363_high_9
Description: NF9363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9363_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 10050632 - 10050337
Alignment:
| Q |
1 |
cttgcatccaatgtctgcattgttcctatataagcaggagaaacatgttaaattgaataagaatattctagccttattctaatgcaaactcttgtggtac |
100 |
Q |
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| T |
10050632 |
cttgcatccaatgtctgcattgttcctatataagcaggagaaacatgttaaattgaataagaatattctagccttattctaatgcaaacccttgcggtac |
10050533 |
T |
|
| Q |
101 |
aaaacagtaaccacagatgaattattcatggtgttaagggatatacaaatctcattggattatactgaaattaccatcacaagtattgaggtcacaaacc |
200 |
Q |
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|||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||| |
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| T |
10050532 |
aaaacagtgaccactgatgaattattcatggtgttaagggatatacaaaactcattggattatattaaaattaccatcacaagtattgaggtcacaaacc |
10050433 |
T |
|
| Q |
201 |
gggcatcgcacaagctgcagatctgatatttaaacaaacaaatctttatttaatcgaaaacttatatcatctgctaaattaattgatatcaatgat |
296 |
Q |
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||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
10050432 |
gggcaccgcacaagctgcagatctgaaatttaaacaaacaaacatttatttaatcgaaaacttatatcatctgctaaattagttgatatcaatgat |
10050337 |
T |
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