View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9363_low_23 (Length: 292)

Name: NF9363_low_23
Description: NF9363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9363_low_23
NF9363_low_23
[»] chr6 (45 HSPs)
chr6 (1-274)||(26800618-26800891)
chr6 (1-262)||(22424688-22424952)
chr6 (1-262)||(17758066-17758328)
chr6 (5-262)||(3808572-3808834)
chr6 (1-262)||(17763033-17763295)
chr6 (17-262)||(21588974-21589218)
chr6 (1-262)||(5043670-5043932)
chr6 (5-262)||(2972804-2973064)
chr6 (1-262)||(26829985-26830248)
chr6 (113-262)||(21593707-21593855)
chr6 (144-262)||(26954294-26954411)
chr6 (55-262)||(603003-603213)
chr6 (128-262)||(28137400-28137533)
chr6 (146-250)||(5413403-5413507)
chr6 (146-256)||(9183041-9183150)
chr6 (161-250)||(5406224-5406313)
chr6 (161-250)||(5410549-5410638)
chr6 (137-250)||(31404675-31404788)
chr6 (146-262)||(33211195-33211310)
chr6 (146-229)||(5409078-5409162)
chr6 (137-250)||(2171532-2171644)
chr6 (146-250)||(30834545-30834649)
chr6 (166-250)||(33160381-33160465)
chr6 (137-247)||(412158-412270)
chr6 (137-247)||(3072759-3072871)
chr6 (161-262)||(3038927-3039028)
chr6 (137-250)||(16452329-16452442)
chr6 (29-227)||(9572667-9572868)
chr6 (137-218)||(6097451-6097533)
chr6 (146-219)||(16569107-16569180)
chr6 (163-261)||(4045467-4045566)
chr6 (137-250)||(16578518-16578632)
chr6 (137-250)||(16616748-16616862)
chr6 (137-250)||(16653166-16653280)
chr6 (137-250)||(16554923-16555037)
chr6 (137-250)||(16631479-16631593)
chr6 (126-262)||(25073611-25073748)
chr6 (137-250)||(27647915-27648028)
chr6 (137-213)||(25421396-25421474)
chr6 (137-213)||(6027337-6027415)
chr6 (146-213)||(13154005-13154074)
chr6 (146-213)||(33342114-33342183)
chr6 (146-213)||(34164948-34165017)
chr6 (137-202)||(34167183-34167248)
chr6 (137-181)||(4641090-4641134)
[»] chr7 (70 HSPs)
chr7 (19-262)||(8359198-8359442)
chr7 (2-262)||(29608780-29609040)
chr7 (1-262)||(3259038-3259298)
chr7 (1-262)||(2390325-2390589)
chr7 (1-262)||(4508570-4508831)
chr7 (1-256)||(34310578-34310835)
chr7 (32-262)||(22328285-22328516)
chr7 (1-262)||(4510412-4510673)
chr7 (1-262)||(4512254-4512515)
chr7 (17-262)||(32357935-32358179)
chr7 (57-262)||(48599255-48599459)
chr7 (126-262)||(22270016-22270151)
chr7 (17-263)||(6359830-6360078)
chr7 (137-262)||(23555083-23555208)
chr7 (146-262)||(6432014-6432129)
chr7 (161-262)||(19502221-19502322)
chr7 (137-262)||(30024733-30024857)
chr7 (161-262)||(2360996-2361097)
chr7 (161-262)||(23565085-23565186)
chr7 (126-262)||(31518946-31519081)
chr7 (137-250)||(35853969-35854082)
chr7 (146-262)||(27347860-27347975)
chr7 (128-262)||(31105385-31105518)
chr7 (137-250)||(29991108-29991221)
chr7 (161-262)||(48491622-48491723)
chr7 (146-262)||(2759207-2759322)
chr7 (146-258)||(25615900-25616012)
chr7 (146-262)||(31732979-31733094)
chr7 (137-247)||(39731426-39731537)
chr7 (175-262)||(47673981-47674068)
chr7 (146-257)||(48489479-48489589)
chr7 (144-262)||(36146416-36146532)
chr7 (161-262)||(496007-496108)
chr7 (161-262)||(1113700-1113801)
chr7 (126-262)||(4253518-4253654)
chr7 (161-250)||(8153397-8153486)
chr7 (161-250)||(25766984-25767074)
chr7 (146-250)||(14069843-14069946)
chr7 (146-250)||(14379871-14379974)
chr7 (146-262)||(41317444-41317559)
chr7 (175-262)||(4586204-4586291)
chr7 (175-262)||(26417359-26417446)
chr7 (137-256)||(47676137-47676255)
chr7 (161-262)||(18126687-18126788)
chr7 (146-262)||(41649021-41649135)
chr7 (146-262)||(43864287-43864402)
chr7 (161-247)||(43504178-43504266)
chr7 (137-250)||(20343951-20344064)
chr7 (126-262)||(23344018-23344151)
chr7 (146-256)||(18396367-18396477)
chr7 (161-228)||(24525526-24525594)
chr7 (126-250)||(48408857-48408984)
chr7 (146-246)||(3904626-3904726)
chr7 (146-262)||(38671232-38671347)
chr7 (137-250)||(24789896-24790009)
chr7 (146-218)||(1560675-1560749)
chr7 (161-250)||(4178829-4178917)
chr7 (130-262)||(36574510-36574641)
chr7 (144-262)||(12097875-12097984)
chr7 (137-213)||(18388760-18388838)
chr7 (137-213)||(18392196-18392274)
chr7 (203-262)||(31518838-31518896)
chr7 (137-213)||(32060322-32060400)
chr7 (19-101)||(2360859-2360941)
chr7 (146-198)||(26639432-26639484)
chr7 (152-229)||(5116679-5116758)
chr7 (137-213)||(6592340-6592418)
chr7 (137-213)||(6594558-6594636)
chr7 (146-210)||(30814530-30814594)
chr7 (130-229)||(5513661-5513760)
[»] chr3 (78 HSPs)
chr3 (1-262)||(49199329-49199595)
chr3 (1-262)||(43401661-43401927)
chr3 (1-262)||(46860517-46860778)
chr3 (5-262)||(36018895-36019148)
chr3 (19-262)||(41819404-41819648)
chr3 (1-262)||(43403604-43403870)
chr3 (1-228)||(55301834-55302064)
chr3 (5-253)||(6095468-6095715)
chr3 (17-262)||(30236168-30236413)
chr3 (1-262)||(54593747-54594010)
chr3 (113-262)||(46173400-46173549)
chr3 (113-262)||(4569995-4570144)
chr3 (137-262)||(34491255-34491379)
chr3 (137-262)||(7762308-7762433)
chr3 (126-262)||(32891147-32891282)
chr3 (55-246)||(40913352-40913546)
chr3 (161-262)||(7764507-7764608)
chr3 (137-262)||(9581325-9581450)
chr3 (146-262)||(40735426-40735541)
chr3 (137-250)||(19683889-19684002)
chr3 (161-262)||(29810911-29811012)
chr3 (137-250)||(45095218-45095331)
chr3 (146-262)||(29813106-29813221)
chr3 (146-262)||(44331588-44331703)
chr3 (146-262)||(51398857-51398972)
chr3 (126-262)||(53921493-53921628)
chr3 (19-262)||(47304294-47304543)
chr3 (161-262)||(760890-760991)
chr3 (146-259)||(16499075-16499187)
chr3 (161-250)||(37408513-37408602)
chr3 (146-262)||(22835012-22835127)
chr3 (146-262)||(40734541-40734656)
chr3 (137-247)||(801148-801260)
chr3 (144-262)||(44700487-44700603)
chr3 (137-250)||(5258144-5258257)
chr3 (137-250)||(23197939-23198052)
chr3 (137-250)||(23200138-23200251)
chr3 (161-262)||(39153385-39153486)
chr3 (146-262)||(29196396-29196511)
chr3 (137-250)||(5260323-5260436)
chr3 (161-247)||(7780028-7780114)
chr3 (146-262)||(29682402-29682517)
chr3 (146-262)||(31314488-31314603)
chr3 (146-262)||(32744446-32744561)
chr3 (161-247)||(9636150-9636236)
chr3 (161-262)||(5236481-5236581)
chr3 (126-260)||(33191877-33192009)
chr3 (146-262)||(9666476-9666591)
chr3 (125-263)||(35138694-35138832)
chr3 (35-260)||(20937701-20937927)
chr3 (146-246)||(4055773-4055874)
chr3 (137-250)||(6716554-6716667)
chr3 (137-250)||(54635179-54635292)
chr3 (203-262)||(31340268-31340326)
chr3 (146-218)||(45283071-45283145)
chr3 (146-262)||(23391919-23392034)
chr3 (109-263)||(39127589-39127745)
chr3 (146-246)||(4075480-4075581)
chr3 (156-262)||(5433901-5434001)
chr3 (146-202)||(27305720-27305775)
chr3 (17-101)||(31340102-31340186)
chr3 (137-213)||(3617540-3617618)
chr3 (146-213)||(25637517-25637586)
chr3 (176-262)||(51352150-51352235)
chr3 (146-213)||(4598532-4598601)
chr3 (146-213)||(10056309-10056378)
chr3 (146-213)||(10058531-10058600)
chr3 (146-213)||(10060753-10060822)
chr3 (146-213)||(10062975-10063044)
chr3 (146-213)||(10065197-10065266)
chr3 (146-213)||(10211485-10211554)
chr3 (161-262)||(23410353-23410454)
chr3 (126-202)||(2075065-2075140)
chr3 (161-213)||(10209265-10209319)
chr3 (146-213)||(4600753-4600822)
chr3 (17-97)||(5270580-5270661)
chr3 (216-256)||(24635306-24635345)
chr3 (171-260)||(25491003-25491091)
[»] chr4 (82 HSPs)
chr4 (17-262)||(12073435-12073680)
chr4 (5-262)||(41964458-41964713)
chr4 (1-262)||(2209756-2210022)
chr4 (5-262)||(379423-379680)
chr4 (1-262)||(50673712-50673972)
chr4 (69-262)||(46703543-46703737)
chr4 (1-262)||(40632488-40632749)
chr4 (17-261)||(35662485-35662728)
chr4 (55-262)||(6655999-6656205)
chr4 (61-260)||(8665453-8665651)
chr4 (30-262)||(26699335-26699568)
chr4 (19-256)||(33989893-33990131)
chr4 (61-262)||(8648182-8648382)
chr4 (57-262)||(41639469-41639673)
chr4 (34-262)||(12119582-12119815)
chr4 (55-262)||(27416884-27417090)
chr4 (57-262)||(50262617-50262826)
chr4 (58-262)||(26364279-26364483)
chr4 (115-262)||(54883063-54883210)
chr4 (137-262)||(56178637-56178762)
chr4 (69-260)||(33089923-33090116)
chr4 (146-262)||(48893648-48893763)
chr4 (146-262)||(9927468-9927583)
chr4 (146-262)||(26175646-26175761)
chr4 (126-261)||(31474195-31474329)
chr4 (129-262)||(37229714-37229847)
chr4 (161-262)||(48143086-48143187)
chr4 (146-262)||(5429722-5429837)
chr4 (126-262)||(6542169-6542304)
chr4 (135-250)||(29999804-29999920)
chr4 (146-262)||(36463399-36463514)
chr4 (146-262)||(37740668-37740783)
chr4 (146-262)||(46147401-46147516)
chr4 (137-247)||(13992293-13992402)
chr4 (146-262)||(47038421-47038535)
chr4 (146-250)||(5370092-5370196)
chr4 (146-262)||(36994567-36994682)
chr4 (20-134)||(55085325-55085439)
chr4 (137-247)||(31495316-31495428)
chr4 (163-262)||(34570440-34570539)
chr4 (126-259)||(4588005-4588137)
chr4 (125-256)||(22882740-22882870)
chr4 (125-256)||(22934404-22934534)
chr4 (146-250)||(12743935-12744038)
chr4 (146-250)||(12745324-12745427)
chr4 (126-250)||(52095352-52095475)
chr4 (179-262)||(24969155-24969238)
chr4 (161-262)||(54199930-54200031)
chr4 (146-250)||(12739560-12739663)
chr4 (146-262)||(45687192-45687307)
chr4 (175-262)||(3913491-3913578)
chr4 (137-250)||(8393448-8393562)
chr4 (137-250)||(8395657-8395771)
chr4 (177-250)||(12744087-12744160)
chr4 (146-262)||(52467364-52467479)
chr4 (146-261)||(29254538-29254652)
chr4 (177-247)||(12745476-12745546)
chr4 (1-101)||(46703752-46703853)
chr4 (161-262)||(5871863-5871964)
chr4 (175-250)||(12747794-12747869)
chr4 (161-228)||(13009468-13009536)
chr4 (117-262)||(21688292-21688437)
chr4 (130-259)||(21703829-21703958)
chr4 (148-260)||(34112862-34112973)
chr4 (161-262)||(5207866-5207967)
chr4 (126-229)||(51337139-51337242)
chr4 (109-181)||(38811162-38811235)
chr4 (126-260)||(44967818-44967952)
chr4 (161-213)||(7124992-7125046)
chr4 (146-213)||(5136155-5136224)
chr4 (146-213)||(5138380-5138449)
chr4 (203-260)||(44570432-44570489)
chr4 (178-260)||(6677514-6677597)
chr4 (212-260)||(34788851-34788898)
chr4 (19-89)||(6719771-6719842)
chr4 (161-213)||(7122773-7122827)
chr4 (17-80)||(21688470-21688533)
chr4 (26-101)||(32091645-32091719)
chr4 (130-224)||(35369440-35369534)
chr4 (213-262)||(55085442-55085490)
chr4 (212-256)||(32091527-32091570)
chr4 (126-252)||(37754949-37755076)
[»] chr1 (75 HSPs)
chr1 (5-262)||(47115214-47115472)
chr1 (1-227)||(28242382-28242609)
chr1 (17-262)||(47255217-47255465)
chr1 (1-262)||(37032933-37033198)
chr1 (1-262)||(29136290-29136551)
chr1 (17-262)||(31925587-31925832)
chr1 (1-262)||(37168340-37168599)
chr1 (17-262)||(13548880-13549125)
chr1 (5-262)||(11348741-11349000)
chr1 (7-262)||(7482100-7482356)
chr1 (69-262)||(13547022-13547214)
chr1 (1-228)||(37876630-37876858)
chr1 (17-262)||(42297852-42298100)
chr1 (28-260)||(6808497-6808730)
chr1 (61-262)||(19754538-19754737)
chr1 (117-259)||(193657-193799)
chr1 (137-262)||(8550787-8550912)
chr1 (144-262)||(34603619-34603737)
chr1 (55-260)||(19752731-19752932)
chr1 (122-262)||(22079359-22079501)
chr1 (137-262)||(3189373-3189498)
chr1 (137-262)||(3198190-3198315)
chr1 (137-262)||(3207029-3207154)
chr1 (161-262)||(46064961-46065062)
chr1 (146-262)||(28220236-28220351)
chr1 (146-262)||(28265564-28265679)
chr1 (144-262)||(49918393-49918510)
chr1 (146-262)||(834177-834292)
chr1 (146-262)||(3156908-3157023)
chr1 (126-262)||(15820350-15820485)
chr1 (146-262)||(31659281-31659396)
chr1 (146-257)||(28223431-28223541)
chr1 (144-250)||(20762727-20762833)
chr1 (137-250)||(13316352-13316465)
chr1 (146-259)||(13659346-13659458)
chr1 (161-262)||(44455203-44455304)
chr1 (161-253)||(1833574-1833666)
chr1 (146-262)||(4552647-4552762)
chr1 (146-262)||(45644364-45644479)
chr1 (130-255)||(5459956-5460081)
chr1 (176-262)||(16455664-16455750)
chr1 (144-262)||(50167183-50167300)
chr1 (137-250)||(51765450-51765565)
chr1 (144-262)||(37503565-37503679)
chr1 (137-262)||(50169211-50169335)
chr1 (146-262)||(13137986-13138101)
chr1 (127-262)||(23555257-23555390)
chr1 (144-262)||(41360957-41361074)
chr1 (127-262)||(37282682-37282817)
chr1 (137-262)||(196908-197033)
chr1 (144-262)||(40122204-40122323)
chr1 (109-201)||(2926613-2926706)
chr1 (175-262)||(10925266-10925356)
chr1 (146-262)||(37559877-37559994)
chr1 (126-262)||(927966-928101)
chr1 (128-263)||(2262965-2263101)
chr1 (146-262)||(3847131-3847246)
chr1 (82-260)||(12318468-12318646)
chr1 (137-247)||(40282435-40282545)
chr1 (12-257)||(9109292-9109540)
chr1 (154-246)||(13938195-13938288)
chr1 (137-218)||(9987287-9987369)
chr1 (137-218)||(20622237-20622319)
chr1 (177-257)||(30476486-30476566)
chr1 (137-250)||(9036471-9036584)
chr1 (137-213)||(44203722-44203800)
chr1 (161-218)||(36683766-36683824)
chr1 (146-218)||(21054044-21054117)
chr1 (57-130)||(34603737-34603810)
chr1 (181-262)||(3460739-3460821)
chr1 (164-202)||(8871089-8871127)
chr1 (233-262)||(37879007-37879036)
chr1 (127-262)||(44650153-44650288)
chr1 (212-260)||(1050520-1050567)
chr1 (212-256)||(25652135-25652178)
[»] chr8 (65 HSPs)
chr8 (2-262)||(40328822-40329078)
chr8 (1-262)||(11384028-11384288)
chr8 (17-262)||(4283567-4283811)
chr8 (1-262)||(18655443-18655706)
chr8 (3-262)||(3772235-3772493)
chr8 (17-262)||(42434870-42435116)
chr8 (55-262)||(40221788-40221994)
chr8 (55-262)||(10930116-10930324)
chr8 (137-262)||(42498237-42498362)
chr8 (126-262)||(1292454-1292588)
chr8 (169-262)||(30143383-30143476)
chr8 (146-262)||(3303680-3303795)
chr8 (146-262)||(15212829-15212944)
chr8 (146-262)||(27811321-27811436)
chr8 (146-262)||(33352193-33352308)
chr8 (146-262)||(43036466-43036581)
chr8 (161-250)||(19945383-19945473)
chr8 (137-246)||(34256507-34256616)
chr8 (137-250)||(44303910-44304023)
chr8 (146-262)||(5689314-5689429)
chr8 (146-260)||(7597659-7597774)
chr8 (146-247)||(2627792-2627895)
chr8 (148-262)||(4731701-4731814)
chr8 (148-257)||(4162545-4162652)
chr8 (137-246)||(17982712-17982821)
chr8 (161-262)||(18141863-18141964)
chr8 (137-250)||(31218312-31218425)
chr8 (137-246)||(34254331-34254440)
chr8 (126-258)||(10015128-10015257)
chr8 (146-262)||(12702644-12702759)
chr8 (146-262)||(40321123-40321238)
chr8 (175-262)||(30291650-30291737)
chr8 (144-262)||(19491707-19491824)
chr8 (137-250)||(1746219-1746331)
chr8 (137-250)||(3439558-3439671)
chr8 (175-262)||(44353836-44353923)
chr8 (144-262)||(1345379-1345496)
chr8 (126-256)||(8153807-8153936)
chr8 (146-260)||(18106091-18106201)
chr8 (146-257)||(29796329-29796442)
chr8 (155-255)||(32902191-32902292)
chr8 (146-259)||(41366625-41366736)
chr8 (130-260)||(11711993-11712124)
chr8 (146-260)||(6599017-6599130)
chr8 (146-260)||(6674470-6674583)
chr8 (132-245)||(3073870-3073981)
chr8 (146-226)||(4733784-4733864)
chr8 (146-218)||(4743224-4743296)
chr8 (137-250)||(25690009-25690122)
chr8 (18-165)||(10240263-10240411)
chr8 (57-140)||(2999723-2999806)
chr8 (146-250)||(9765800-9765902)
chr8 (146-261)||(8965701-8965815)
chr8 (175-262)||(1822335-1822423)
chr8 (175-262)||(1856780-1856868)
chr8 (12-257)||(11137073-11137320)
chr8 (146-202)||(38863961-38864017)
chr8 (146-213)||(15290614-15290683)
chr8 (146-213)||(15470983-15471052)
chr8 (146-213)||(42575333-42575402)
chr8 (212-262)||(3231872-3231921)
chr8 (232-262)||(10929842-10929872)
chr8 (186-227)||(10929865-10929907)
chr8 (185-260)||(30909413-30909487)
chr8 (203-262)||(10240197-10240256)
[»] scaffold0176 (1 HSPs)
scaffold0176 (5-262)||(17871-18128)
[»] chr5 (60 HSPs)
chr5 (19-261)||(27637495-27637737)
chr5 (55-262)||(40147304-40147510)
chr5 (1-262)||(213508-213772)
chr5 (17-262)||(5058088-5058334)
chr5 (12-262)||(16640814-16641062)
chr5 (126-262)||(13239794-13239930)
chr5 (126-262)||(28278359-28278494)
chr5 (36-260)||(316807-317032)
chr5 (126-261)||(16452124-16452258)
chr5 (137-246)||(37439200-37439309)
chr5 (126-262)||(9049332-9049467)
chr5 (19-228)||(27015599-27015808)
chr5 (137-262)||(538068-538192)
chr5 (161-250)||(25412815-25412904)
chr5 (146-262)||(13488246-13488361)
chr5 (146-262)||(42428440-42428555)
chr5 (113-203)||(4160701-4160791)
chr5 (137-250)||(13343116-13343228)
chr5 (137-250)||(36074043-36074155)
chr5 (146-262)||(533812-533927)
chr5 (137-247)||(9789224-9789335)
chr5 (137-247)||(16409532-16409643)
chr5 (137-247)||(26177939-26178050)
chr5 (144-262)||(8565954-8566071)
chr5 (126-262)||(13695680-13695816)
chr5 (137-250)||(30182643-30182756)
chr5 (161-262)||(33831723-33831824)
chr5 (165-262)||(42309963-42310060)
chr5 (146-250)||(32636879-32636982)
chr5 (144-256)||(42426243-42426354)
chr5 (137-247)||(18441648-18441759)
chr5 (146-262)||(30682932-30683049)
chr5 (175-262)||(39468587-39468674)
chr5 (148-256)||(28750667-28750774)
chr5 (175-262)||(38747048-38747135)
chr5 (137-250)||(10593312-10593426)
chr5 (137-218)||(26170848-26170930)
chr5 (126-262)||(3075648-3075783)
chr5 (149-260)||(33906042-33906154)
chr5 (144-256)||(10054823-10054935)
chr5 (146-262)||(31183015-31183129)
chr5 (137-247)||(29722582-29722692)
chr5 (137-247)||(29751160-29751270)
chr5 (137-250)||(22536290-22536403)
chr5 (126-230)||(30793210-30793314)
chr5 (1-86)||(40751195-40751277)
chr5 (156-260)||(3325958-3326063)
chr5 (203-261)||(42926911-42926968)
chr5 (137-247)||(29720422-29720532)
chr5 (137-213)||(25078211-25078289)
chr5 (137-213)||(25136180-25136258)
chr5 (137-213)||(40380181-40380259)
chr5 (137-213)||(40382392-40382470)
chr5 (126-228)||(42926967-42927069)
chr5 (146-202)||(19806466-19806521)
chr5 (69-260)||(10700581-10700771)
chr5 (146-213)||(16544499-16544568)
chr5 (146-213)||(16546721-16546790)
chr5 (17-86)||(40763200-40763269)
chr5 (212-258)||(14689503-14689548)
[»] chr2 (50 HSPs)
chr2 (1-262)||(45726972-45727231)
chr2 (1-262)||(42287975-42288235)
chr2 (39-262)||(35446788-35447009)
chr2 (17-273)||(7451149-7451406)
chr2 (23-262)||(33648214-33648454)
chr2 (1-211)||(17450671-17450877)
chr2 (34-262)||(24398100-24398332)
chr2 (114-262)||(1631710-1631857)
chr2 (146-262)||(2334427-2334543)
chr2 (137-262)||(36988076-36988201)
chr2 (131-262)||(17490143-17490273)
chr2 (146-259)||(17057379-17057491)
chr2 (146-259)||(17085362-17085474)
chr2 (146-262)||(6595015-6595131)
chr2 (146-262)||(36773605-36773720)
chr2 (146-262)||(723754-723869)
chr2 (144-262)||(33162458-33162575)
chr2 (137-250)||(4503133-4503245)
chr2 (137-250)||(5723256-5723369)
chr2 (137-250)||(45099810-45099922)
chr2 (175-259)||(7815311-7815395)
chr2 (146-262)||(36318019-36318134)
chr2 (37-260)||(30217945-30218168)
chr2 (161-262)||(42362395-42362496)
chr2 (146-262)||(11067348-11067463)
chr2 (146-262)||(38312283-38312398)
chr2 (147-262)||(26353227-26353341)
chr2 (161-250)||(4484354-4484444)
chr2 (146-262)||(14633835-14633951)
chr2 (146-262)||(34139780-34139896)
chr2 (146-262)||(11151601-11151716)
chr2 (146-250)||(29867924-29868027)
chr2 (148-200)||(28672036-28672088)
chr2 (137-247)||(32289621-32289732)
chr2 (161-246)||(30833404-30833490)
chr2 (126-259)||(42019859-42019995)
chr2 (161-262)||(11049596-11049698)
chr2 (137-250)||(36205665-36205777)
chr2 (137-262)||(11690544-11690668)
chr2 (171-262)||(13121812-13121901)
chr2 (137-247)||(6266749-6266859)
chr2 (146-250)||(13656041-13656146)
chr2 (137-213)||(12647386-12647464)
chr2 (146-210)||(39284930-39284994)
chr2 (145-257)||(7597020-7597131)
chr2 (175-262)||(14202450-14202530)
chr2 (176-260)||(42261524-42261609)
chr2 (161-202)||(42412121-42412161)
chr2 (212-256)||(4561137-4561180)
chr2 (209-260)||(34811295-34811345)
[»] scaffold0466 (1 HSPs)
scaffold0466 (17-262)||(7370-7616)
[»] scaffold0236 (1 HSPs)
scaffold0236 (1-248)||(10546-10793)
[»] scaffold0219 (1 HSPs)
scaffold0219 (134-260)||(27439-27566)
[»] scaffold0286 (1 HSPs)
scaffold0286 (137-250)||(11612-11725)
[»] scaffold0016 (1 HSPs)
scaffold0016 (137-250)||(114657-114770)
[»] scaffold0002 (2 HSPs)
scaffold0002 (137-250)||(434588-434701)
scaffold0002 (176-260)||(490359-490444)
[»] scaffold0006 (1 HSPs)
scaffold0006 (146-259)||(149107-149219)
[»] scaffold0066 (1 HSPs)
scaffold0066 (146-262)||(20425-20540)
[»] scaffold1519 (1 HSPs)
scaffold1519 (137-250)||(971-1083)
[»] scaffold0491 (2 HSPs)
scaffold0491 (137-247)||(8735-8846)
scaffold0491 (137-247)||(11161-11272)
[»] scaffold0674 (1 HSPs)
scaffold0674 (146-213)||(3735-3804)
[»] scaffold0565 (1 HSPs)
scaffold0565 (137-213)||(2604-2682)
[»] scaffold0014 (1 HSPs)
scaffold0014 (204-262)||(80351-80408)
[»] scaffold0197 (1 HSPs)
scaffold0197 (32-101)||(1291-1360)
[»] scaffold0137 (1 HSPs)
scaffold0137 (146-213)||(6363-6432)
[»] scaffold0477 (1 HSPs)
scaffold0477 (137-181)||(6981-7025)


Alignment Details
Target: chr6 (Bit Score: 241; Significance: 1e-133; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 26800891 - 26800618
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  26800891 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagcaaaaccacaatctaaccaaaagataaacaaga 26800792  T
Q  101 tnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccact 200  Q
    |       |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26800791 taaaaagagtagagaaaagataacaacaccaagaaatgttcatccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccact 26800692  T
Q  201 ataatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcacccaagttgctct 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26800691 ataatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcacccaagttgctct 26800618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 22424688 - 22424952
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaa--ccacaatctaaccaaaggataaacaa 98  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||| | |||||| ||||||||| ||||||  ||||||||||||| ||||||||||||    
T  22424688 taaccaaatgtaaataaccacaaacaacaacaacaatctagatctaatatagaaaccaagtgcattgaaaaaaaccacaatctaacctaaggataaacaa 22424787  T
Q  99 gatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatcca 198  Q
    |||       |||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22424788 gataaagagagtagagaaaagataacaacaccaagaaatgttcacccagtacggtccaacaatgacctactctgaaggagagattgatctctccaatcca 22424887  T
Q  199 ctataatgagttcttacaaagagatac-aaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||||||    
T  22424888 ctataatgagttcttacaaagagatacaaaaatgggttacaagaaattagcttaaacaagctcac 22424952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 17758328 - 17758066
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 100  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17758328 taaccaaatgtaaataaccgcaagcaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaaccacaatctaaccaaaggataaacaaga 17758229  T
Q  101 tnnnnnnngtaga-gaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccac 199  Q
    |       ||| | | ||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||| |||| ||||||||||||||||||||||    
T  17758228 taaagagcgtaaaaggaaagataacaacaccaagaaatgttcacctagttcggtccaaacttgaactactctagaggggagattgatctctccaatccac 17758129  T
Q  200 tat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  17758128 tatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 17758066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 5 - 262
Target Start/End: Original strand, 3808572 - 3808834
Alignment:
Q  5 caaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnn 104  Q
    ||||||||||| |||| |||||||| |||||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||||||||||||||       
T  3808572 caaatgtaaataaccaaaagcaatagcaacaatctagatctaatctagaaaacaaatgcatagcaaaaccataatctaaccaaaggataaacaagataaa 3808671  T
Q  105 nnnngtagagaaaa---gataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccact 200  Q
        ||||||||||   || |||||| |||||| || ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  3808672 gagagtagagaaaaatagacaacaaccccaagagattgttcacctagttcggtccaatcatgacctactctggaggagagattgatctctccaatccact 3808771  T
Q  201 at-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    || ||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  3808772 atcaatgagttcttacaaagagatacaaaatgggttacaagaaattagtttcaacaagctcac 3808834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 17763295 - 17763033
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 100  Q
    ||||||||||||||| | ||||| |||||||||||||||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||| |||||||    
T  17763295 taaccaaatgtaaataatcacaaacaataacaacaatctagatctaatctagataacaagtgcatagcaaaactacaatctaaccaaaggatgaacaaga 17763196  T
Q  101 tnnnnnnngtaga-gaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccac 199  Q
    |       ||| | ||||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||||||||||||||||||| |||||||||||    
T  17763195 taaagagagtaaaagaaaagataacaacaccaagaaatgttcacctagttcggtccaaacttgatctactctggaggagagattgatcactccaatccac 17763096  T
Q  200 tat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||| ||||||||||| |||| |||||| |||| |||||||||||||||||||||||||||||||    
T  17763095 tatcaatgagttcttccaaaaagatac-aaatgagttacaagaaattagcttcaacaagctcac 17763033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 21589218 - 21588974
Alignment:
Q  17 accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaa 116  Q
    ||||||||||||||||||||| |||| |||||||| ||| ||||||||||| |||||||||||| ||| || | |||||||||||       ||| ||||    
T  21589218 accacaagcaataacaacaatatagacctagtctataaaccaagtgcatagcaaaaccacaatccaactaaggaataaacaagataaggaaagtaaagaa 21589119  T
Q  117 aagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac 215  Q
    |||||||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21589118 aagataacaacaccaagaaatgttcacccagttcggtccaac-ttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttac 21589020  T
Q  216 aaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||    
T  21589019 aaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 21588974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 5043932 - 5043670
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaa 98  Q
    ||||||||||||||| ||| ||||||| ||||||||| ||  || ||| |||| ||  ||||||||||| |||||||||||| ||||||   ||||||||    
T  5043932 taaccaaatgtaaataacctcaagcaacaacaacaatatatagacctattctataat-caagtgcatagcaaaaccacaatccaaccaagaaataaacaa 5043834  T
Q  99 gatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatcca 198  Q
    |||       ||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  5043833 gataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaacaatgacctactatggaggagagattgatctctccaatcta 5043734  T
Q  199 ctat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  5043733 ctatcaatgagttcttacaaagagatac-aaatgagttacaagaaattagcttcaacaagctcac 5043670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 262
Target Start/End: Original strand, 2972804 - 2973064
Alignment:
Q  5 caaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaa-ccacaatctaaccaaaggataaacaagatnn 103  Q
    ||||||||||| ||||||| ||| ||||||||| |||| |||||||| |||  ||||||||||||||| |||||||||||||||| ||||||||||||      
T  2972804 caaatgtaaataaccacaaacaacaacaacaatatagacctagtctataaactaagtgcatagaaaaaaccacaatctaaccaaatgataaacaagatat 2972903  T
Q  104 nnnnngtagag----aaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccac 199  Q
         | ||||    |||| ||||||||||||||||||||||| ||||||||||| |||  ||||||||||| |||||||||||||||||||||||||||    
T  2972904 agagag-agagtaaaaaaaaataacaacaccaagaaatgttcacctagttcggtcgaact-tgacctactcttgaggagagattgatctctccaatccac 2973001  T
Q  200 tat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  2973002 tatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 2973064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 26829985 - 26830248
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaagga-taaacaag 99  Q
    ||||||||||||||| ||||||||||||||||||||| || | |||||||| ||| ||||||||||| |||||||||||| ||   ||||| ||||||||    
T  26829985 taaccaaatgtaaataaccacaagcaataacaacaatataaacctagtctataaaccaagtgcatagcaaaaccacaatccaaagcaaggaataaacaag 26830084  T
Q  100 atnnnnnnng--tagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatcc 197  Q
    ||       |  || |||||||||||||||||||||||||||||| | ||||| ||| |||  ||||||||| |||||||||||||||||||||||||||    
T  26830085 ataaagagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcagtcaaact-tgacctactttggaggagagattgatctctccaatcc 26830183  T
Q  198 actat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||| ||||||||||||||||||||||| ||||   |||||||||||||||||||||||||||||    
T  26830184 actatcaatgagttcttacaaagagatac-aaatggattacaagaaattagcttcaacaagctcac 26830248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 113 - 262
Target Start/End: Complemental strand, 21593855 - 21593707
Alignment:
Q  113 agaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc 211  Q
    |||||||||||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21593855 agaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctggaggagagattgatctctccaatccactatcaatgagttc 21593757  T
Q  212 ttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  21593756 ttacaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 21593707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 26954294 - 26954411
Alignment:
Q  144 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 242  Q
    |||||||||||||||  ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| | || |||||||||||    
T  26954294 ctagttcggtccaact-tgacctactttgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-agatgagttacaagaa 26954391  T
Q  243 attagcttcaacaagctcac 262  Q
    ||||||||||||||||||||    
T  26954392 attagcttcaacaagctcac 26954411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 55 - 262
Target Start/End: Original strand, 603003 - 603213
Alignment:
Q  55 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa---gataacaacaccaagaaat-gttcatctagttc 150  Q
    ||||||||||||| |||||||||||| |||||| | |||||||||||       ||||||||||   || ||||||| ||||| || ||| | | |||||    
T  603003 aacaagtgcatagtaaaaccacaatccaaccaaggcataaacaagataaagagagtagagaaaaatagacaacaacatcaagagattgttgacccagttc 603102  T
Q  151 ggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagct 249  Q
    ||||||||  ||||||| ||| | |||||||||||| ||||||||||||||| || ||||||||||||||||||||||| |  |||||||||||||||||    
T  603103 ggtccaact-tgacctaatcttggggagagattgatttctccaatccactatcaacgagttcttacaaagagatacaaa-tgggttacaagaaattagct 603200  T
Q  250 tcaacaagctcac 262  Q
    |||||||||||||    
T  603201 tcaacaagctcac 603213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 128 - 262
Target Start/End: Original strand, 28137400 - 28137533
Alignment:
Q  128 accaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagataca 226  Q
    |||||||||||||||   | |||||||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||     
T  28137400 accaagaaatgttcacacaattcggtccaact-tgacctactctgggggagagattgatctctccaatccactatcaatgagttcttacaaagaaatac- 28137497  T
Q  227 aaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||  |||||||||||||||||| |||||||||||    
T  28137498 aaatgggttacaagaaattagcttaaacaagctcac 28137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 5413403 - 5413507
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||    
T  5413403 agttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggttacaagaaat 5413501  T
Q  245 tagctt 250  Q
    ||||||    
T  5413502 tagctt 5413507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 9183041 - 9183150
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  |||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  9183041 agttcggtccaact-tgacataatctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 9183138  T
Q  245 tagcttcaacaa 256  Q
    ||||||||||||    
T  9183139 tagcttcaacaa 9183150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 161 - 250
Target Start/End: Original strand, 5406224 - 5406313
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 250  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||    
T  5406224 tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggttacaagaaattagctt 5406313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 161 - 250
Target Start/End: Original strand, 5410549 - 5410638
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 250  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||    
T  5410549 tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggttacaagaaattagctt 5410638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 31404675 - 31404788
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  31404675 tgttcacccagttcggtccaaacttggcctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 31404773  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  31404774 acaagaaattagctt 31404788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 33211195 - 33211310
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||| || ||||||||||    
T  33211195 agttcggtccaact-tgacctactctgggggagagattgatctctccaatccattataaatgagttcttacaaagagatac-aaatgagctacaagaaat 33211292  T
Q  245 tagcttcaacaagctcac 262  Q
    || ||||| |||||||||    
T  33211293 taacttcatcaagctcac 33211310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 5409078 - 5409162
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaa 229  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5409078 agttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa 5409162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 2171532 - 2171644
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    |||    
T  2171532 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaagagatacaaa--gggtt 2171629  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  2171630 acaagaaattagctt 2171644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 30834545 - 30834649
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||   ||||||||||||    
T  30834545 agttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttccaaagagatacaaaa-gggttacaagaaat 30834643  T
Q  245 tagctt 250  Q
    ||||||    
T  30834644 tagctt 30834649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 33160381 - 33160465
Alignment:
Q  166 tactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 250  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||||||||||||||    
T  33160381 tactctggaggagagattgatctctccaatccaccatcaatgagttcttacaaagagatacaaaa-gagttacaagaaattagctt 33160465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 412270 - 412158
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||| ||||||||||||||  |||    
T  412270 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctctaatccactatcaatgagttcttacaaaagagatacaaaaagagt 412171  T
Q  235 tacaagaaattag 247  Q
    |||||||||||||    
T  412170 tacaagaaattag 412158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 3072759 - 3072871
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||| ||||||||||||||  |||    
T  3072759 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaattcactatcaatgagttcttacaaaagagatacaaaaagagt 3072858  T
Q  235 tacaagaaattag 247  Q
    |||||||||||||    
T  3072859 tacaagaaattag 3072871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 3038927 - 3039028
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccacta-taatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||| ||||| ||||||||| ||||||||||||||||| ||| |||||||||||||||||||| ||||  ||||||||||||||||||||| |||||    
T  3038927 tgacctaatctgggggagagattaatctctccaatccactattaaagagttcttacaaagagatac-aaatgggttacaagaaattagcttcaaaaagct 3039025  T
Q  260 cac 262  Q
    |||    
T  3039026 cac 3039028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 16452329 - 16452442
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||  |||   |||    
T  16452329 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttccaaagagatatgaaa-gggtt 16452427  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  16452428 acaagaaattagctt 16452442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 9572868 - 9572667
Alignment:
Q  29 aacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaaca 128  Q
    ||||| |||||||||||| |||||||| |||||||||||||| ||||||||| || ||||| ||| | |||||         ||||||||||||||||||    
T  9572868 aacaataatctagatctaatctagaaaccaagtgcatagaaataccacaatcgaatcaaagaatagataagataaagacacgagagaaaagataacaaca 9572769  T
Q  129 ccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctt-acaaagagatac 225  Q
     ||||||||  || | | |||||| | |||  ||||||||||||  || |||||||||||||| ||||||||||| |||| |||||| |||||||| |||    
T  9572768 tcaagaaatattttacccagttcgtttcaatgatgacctactctaaagtagagattgatctctgcaatccactatcaatgggttcttaacaaagagttac 9572669  T
Q  226 aa 227  Q
    ||    
T  9572668 aa 9572667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 6097451 - 6097533
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 218  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  6097451 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaa 6097533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 16569180 - 16569107
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaag 219  Q
    |||||||||||||  ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16569180 agttcggtccaact-tgacctaatctggaggagagattgatctctccaatccactatcaatgagttcttacaaag 16569107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 4045566 - 4045467
Alignment:
Q  163 acctactctggaggagagattgatctctccaatccactat-aatgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaagctc 260  Q
    ||||||| ||| | ||| |||||||||||||||||||||| |||||||| || ||||||||||| ||||| | |||||||||||||||||||||||||||    
T  4045566 acctactttggggtagaaattgatctctccaatccactatcaatgagttatttacaaagagatataaaatga-ttacaagaaattagcttcaacaagctc 4045468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 16578518 - 16578632
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 233  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  16578518 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 16578615  T
Q  234 ttacaagaaattagctt 250  Q
    |||||||||||||||||    
T  16578616 ttacaagaaattagctt 16578632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 16616862 - 16616748
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 233  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  16616862 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 16616765  T
Q  234 ttacaagaaattagctt 250  Q
    |||||||||||||||||    
T  16616764 ttacaagaaattagctt 16616748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 16653280 - 16653166
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 233  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  16653280 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 16653183  T
Q  234 ttacaagaaattagctt 250  Q
    |||||||||||||||||    
T  16653182 ttacaagaaattagctt 16653166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 16555037 - 16554923
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 233  Q
    |||||| | ||||||||||||   ||||||||| |||||||||| |||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  16555037 tgttcacccagttcggtccaaacttgacctactttggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 16554940  T
Q  234 ttacaagaaattagctt 250  Q
    |||||||||||||||||    
T  16554939 ttacaagaaattagctt 16554923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 16631593 - 16631479
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 233  Q
    |||||| | ||||||||||||   ||||||||| |||||||||| |||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  16631593 tgttcacccagttcggtccaaacttgacctactttggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 16631496  T
Q  234 ttacaagaaattagctt 250  Q
    |||||||||||||||||    
T  16631495 ttacaagaaattagctt 16631479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 262
Target Start/End: Complemental strand, 25073748 - 25073611
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagat 223  Q
    ||||||||||||||| | ||||||  ||| |||||| ||||| | || | ||||||||||| |||| |||||||||| ||||||||| ||||| ||||||    
T  25073748 acaccaagaaatgtttacctagtttagtctaacaataacctaatttgaatgagagattgatttctctaatccactatcaatgagttctttacatagagat 25073649  T
Q  224 acaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||   ||||||| ||| |||||| |||||||||||    
T  25073648 acaaaa-gggttacaataaaatagctttaacaagctcac 25073611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 27648028 - 27647915
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||| |||||||||||||||| |||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  27648028 tgttcacccagttcggtccaaacttgatctactctggaggagagtttgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 27647931  T
Q  235 tacaagaaattagctt 250  Q
    ||||||||||||||||    
T  27647930 tacaagaaattagctt 27647915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 25421474 - 25421396
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  25421474 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 25421396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 6027415 - 6027337
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    |||||| | ||||||||||||   |||| |||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  6027415 tgttcacccagttcggtccaaacttgacatactctggaggagagattgtactctccaatccactatcaaatgagttctt 6027337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 13154074 - 13154005
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  13154074 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 13154005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 33342114 - 33342183
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  33342114 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 33342183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 34165017 - 34164948
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  34165017 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 34164948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 34167248 - 34167183
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat 202  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||    
T  34167248 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactat 34167183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 4641134 - 4641090
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagaga 181  Q
    |||| ||| |||||||||||| ||||||||||||| |||||||||    
T  4641134 tgtttatccagttcggtccaataatgacctactctagaggagaga 4641090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 180; Significance: 3e-97; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 19 - 262
Target Start/End: Original strand, 8359198 - 8359442
Alignment:
Q  19 cacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa 118  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||       ||||||||||    
T  8359198 cacaagcaacaacaacaatctagatctaatctagaaaacaagtgcatagcaaaaccacaatctaaccaaaggataaacaagataatgagagtagagaaaa 8359297  T
Q  119 gataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaa 217  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8359298 gataacaacaccaagaaatgttcacccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaa 8359397  T
Q  218 agagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||  ||||||||||||||| || |||||||||||    
T  8359398 agagatacaaaatgggttacaagaaattagtttaaacaagctcac 8359442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 2 - 262
Target Start/End: Complemental strand, 29609040 - 29608780
Alignment:
Q  2 aaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcata-gaaaaaccacaatctaaccaaaggataaacaaga 100  Q
    |||||||||||||| ||||||||||| |||||||||||||||||| | |||||| ||||||||||  |||||||||||||||| ||||||||||||||||    
T  29609040 aaccaaatgtaaataaccacaagcaacaacaacaatctagatctaatatagaaaccaagtgcatatcaaaaaccacaatctaagcaaaggataaacaaga 29608941  T
Q  101 tnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccact 200  Q
    |       ||||||||||||||||||||||||||||| ||||   |||||||||||||  |||||||||||||||||| ||||||| |||||||||||||    
T  29608940 taaagagagtagagaaaagataacaacaccaagaaatattcactcagttcggtccaac-ttgacctactctggaggagtgattgatatctccaatccact 29608842  T
Q  201 at-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    || ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  29608841 atcaatgagttcttacaaagagatac-aaatgagttacaagaaattagcttcaacaagctcac 29608780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 3259298 - 3259038
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| | |||||| |||||||||||| |||||| | ||||||||||    
T  3259298 taaccaaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacacgggcatagcaaaaccacaatccaaccaaggaataaacaaga 3259199  T
Q  101 tnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccact 200  Q
    |       ||| ||||||||||||||||||| |||||||||| | |||||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  3259198 taaagagagtaaagaaaagataacaacaccaggaaatgttcacccagttcggttcaac-ttgacctactctggaggagagattgatctctccaatccact 3259100  T
Q  201 at-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    || |||| ||| |||||||||||||| |||| |||||||| |||||||||| |||||||||||    
T  3259099 atcaatgggtttttacaaagagatac-aaatgagttacaataaattagcttaaacaagctcac 3259038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 2390589 - 2390325
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||| || |||| |||||||||||| ||| |||||||||||||||    
T  2390589 taaccaaatgtaaataaccacaatcaataacaacaatctagatctaatctagaaaacaaatgtatagcaaaaccacaatccaacaaaaggataaacaaga 2390490  T
Q  101 tnnnnnnngtagagaaaag---ataacaacaccaagaaatg-ttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatc 196  Q
    |       ||||||||||    | ||||||||||||| ||  |||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  2390489 taaagagagtagagaaaaataaacaacaacaccaagagattattcacctagttcggtccaact-tgacctactctggaggagagattgatctctccaatc 2390391  T
Q  197 cactata-atgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||| ||||||| |||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  2390390 cactatatatgagttattacaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 2390325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 4508570 - 4508831
Alignment:
Q  1 taaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaag 99  Q
    ||||||||| ||||| | |||||||||||||||||||| |||| |||||||| ||| ||||||||||| |||||||||||  ||||||||||||||||||    
T  4508570 taaccaaatataaataaaccacaagcaataacaacaatatagacctagtctataaaccaagtgcatagcaaaaccacaattcaaccaaaggataaacaag 4508669  T
Q  100 atnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccac 199  Q
    ||       ||| |||||| ||||||||||||||||||||||| | |||||||||||||  | |||||||||| || |||||||||||||||||||||||    
T  4508670 ataaagagagtaaagaaaatataacaacaccaagaaatgttcacccagttcggtccaac-ttaacctactctgaagaagagattgatctctccaatccac 4508768  T
Q  200 tat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    | | ||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||    
T  4508769 tctcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaataagctcac 4508831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 34310578 - 34310835
Alignment:
Q  1 taaccaaatgtaaatt-accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaagga-taaacaa 98  Q
    |||||||||||||||  ||||||||||||||||||||| |||| |||||||| ||| ||||||||||| |||||||||||  |||||||||| |||||||    
T  34310578 taaccaaatgtaaatagaccacaagcaataacaacaatatagacctagtctataaaccaagtgcatagcaaaaccacaattcaaccaaaggaataaacaa 34310677  T
Q  99 gatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatcca 198  Q
    |||       ||| ||||||||||||||||||||  | |||||| | ||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  34310678 gataaagagagtaaagaaaagataacaacaccaaagattgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatcca 34310777  T
Q  199 ctat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 256  Q
    |||| |||||||||||||||| |||||| ||||  ||||||||||||||||||||||||    
T  34310778 ctatcaatgagttcttacaaaaagatac-aaatgtgttacaagaaattagcttcaacaa 34310835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 32 - 262
Target Start/End: Original strand, 22328285 - 22328516
Alignment:
Q  32 aacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacacca 131  Q
    ||||||||||||||| || ||||| ||||||||||  |||||||||||| ||| |||| |||||||||||       |||||||||||||||||||||||    
T  22328285 aacaatctagatctaatcgagaaaccaagtgcataacaaaaccacaatcgaacaaaagaataaacaagataaagagagtagagaaaagataacaacacca 22328384  T
Q  132 agaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagtt-cttacaaagagatacaaaa 229  Q
    | |||| || | | |||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||| || ||| |||||||||||||||    
T  22328385 aaaaatatttacccagttcggtccaacaatgacctactctaggggagagattgatctctcaaatccactattaatgacttccttgcaaagagatacaaaa 22328484  T
Q  230 ttagttacaagaaattagcttcaacaagctcac 262  Q
      |||||||||||||||||||||||||||||||    
T  22328485 -gagttacaagaaattagcttcaacaagctcac 22328516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 4510412 - 4510673
Alignment:
Q  1 taaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaag 99  Q
    ||||||||||||||| | |||||||||||||||||||| |||| |||||||| ||| ||||||||||| |||| ||||||  ||| || |||||||||||    
T  4510412 taaccaaatgtaaataaaccacaagcaataacaacaatatagacctagtctataaatcaagtgcatagcaaaaacacaattcaactaatggataaacaag 4510511  T
Q  100 atnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccac 199  Q
    ||       ||| |||||||||||||||||||||||||||||| | ||| |||||||||  |||||||||||  ||||||||||||| ||| ||||||||    
T  4510512 atcaagagagtaaagaaaagataacaacaccaagaaatgttcacccagtacggtccaac-ttgacctactctacaggagagattgatttcttcaatccac 4510610  T
Q  200 tat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||| |||||||||||| |||||||||| ||||  ||||||||||||||||||||| || |||||    
T  4510611 tatcaatgagttcttataaagagatac-aaatgggttacaagaaattagcttcaataaactcac 4510673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 4512254 - 4512515
Alignment:
Q  1 taaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaag 99  Q
    ||||||||||||||| | |||||||||||||||||||| |||| |||||||| ||| ||||||||||| |||| ||||||  ||| || |||||||||||    
T  4512254 taaccaaatgtaaataaaccacaagcaataacaacaatatagacctagtctataaatcaagtgcatagcaaaaacacaattcaactaatggataaacaag 4512353  T
Q  100 atnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccac 199  Q
    ||       ||| |||||||||||||||||||||||||||||| | ||| |||||||||  |||||||||||  ||||||||||||| ||| ||||||||    
T  4512354 atcaagagagtaaagaaaagataacaacaccaagaaatgttcacccagtacggtccaac-ttgacctactctacaggagagattgatttcttcaatccac 4512452  T
Q  200 tat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||| |||||||||||| |||||||||| ||||  ||||||||||||||||||||| || |||||    
T  4512453 tatcaatgagttcttataaagagatac-aaatgggttacaagaaattagcttcaataaactcac 4512515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 32357935 - 32358179
Alignment:
Q  17 accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaa 116  Q
    ||||||||||| ||||| ||| |||| ||||| || ||  ||| ||||||  |||||||||||  || ||| | ||||||||| |       ||| ||||    
T  32357935 accacaagcaacaacaataatatagacctagtttataatccaattgcataacaaaaccacaattcaagcaaggaataaacaagttaaagagagtaaagaa 32358034  T
Q  117 aagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac 215  Q
    |||||||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32358035 aagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttac 32358133  T
Q  216 aaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||    
T  32358134 aaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 32358179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 57 - 262
Target Start/End: Original strand, 48599255 - 48599459
Alignment:
Q  57 caagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtcca 156  Q
    |||||||| || ||||| |||||| |||||| | |||||||||||       ||| |||||||||||||||| ||||||||||||| | |||||||||||    
T  48599255 caagtgcacagcaaaactacaatccaaccaaggaataaacaagataaagagagtaaagaaaagataacaacatcaagaaatgttcacccagttcggtcca 48599354  T
Q  157 acaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaaca 255  Q
    ||  ||| || ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||| |||| ||||||||||||||||||||||||    
T  48599355 act-tgatctgctctggaggagagattgatctctccaatccactatcaatgagctcttccaaagagatac-aaatgagttacaagaaattagcttcaaca 48599452  T
Q  256 agctcac 262  Q
    |||||||    
T  48599453 agctcac 48599459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 126 - 262
Target Start/End: Complemental strand, 22270151 - 22270016
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    ||||||||| ||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  22270151 acaccaagagatgttcacccagttcggtccaact-tgacctactctggaggagagattgatctctccaatccactatcaatcagttcttacaaagagata 22270053  T
Q  225 caaaattagttacaagaaattagcttcaacaagctcac 262  Q
    | ||||  ||||||||||||||||||||||||||||||    
T  22270052 c-aaatgggttacaagaaattagcttcaacaagctcac 22270016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 6359830 - 6360078
Alignment:
Q  17 accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaagga-taaacaagatnnnnnnngtaga-g 114  Q
    ||||||||||| ||||| ||| || | |||||||| ||| ||||||||||| |||||||||||| |||  ||||| ||||||||||       | | | |    
T  6359830 accacaagcaacaacaataatatatacctagtctataaaccaagtgcatagcaaaaccacaatccaacttaaggaataaacaagataaagaaagcaaatg 6359929  T
Q  115 aaaagataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttct 212  Q
    ||||||||||||||||||||||| ||| | | |||||| ||||||  ||||||| | ||| | |||||||||||||||||||| ||||| ||||||||||    
T  6359930 aaaagataacaacaccaagaaattgttgacccagttcgatccaact-tgacctaatatggggaagagattgatctctccaatcaactatcaatgagttct 6360028  T
Q  213 tacaaagagatacaaaattagttacaagaaattagcttcaacaagctcacc 263  Q
    |||||||||||||||| |  |||||||||||||||||||||||||||||||    
T  6360029 tacaaagagatacaaa-tgggttacaagaaattagcttcaacaagctcacc 6360078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 23555208 - 23555083
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| | |||    
T  23555208 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagaggtacaaaagt-gtt 23555110  T
Q  236 acaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||| ||||    
T  23555109 acaagaaattagcttcaacaagttcac 23555083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 6432129 - 6432014
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  |||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||||    
T  6432129 agttcggtccaact-tgacctactctgaaggagagattgatctctccaatccactatcaacgagttcttacaaagagatac-aaatgggttacaagaaat 6432032  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||||||||    
T  6432031 tagcttcaacaagctcac 6432014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 19502322 - 19502221
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||  |||||||    
T  19502322 tgacttactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagttacaagaaattagctttgacaagct 19502224  T
Q  260 cac 262  Q
    |||    
T  19502223 cac 19502221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 262
Target Start/End: Original strand, 30024733 - 30024857
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||| ||| |||||||||||||  ||||||||||||| |||| ||||||||||||||||||||||| || |||||||||||||||||||| ||||  |||    
T  30024733 tgttgatccagttcggtccaact-tgacctactctgggggagtgattgatctctccaatccactatcaaagagttcttacaaagagatac-aaatgggtt 30024830  T
Q  236 acaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||||||||    
T  30024831 acaagaaattagcttcaacaagctcac 30024857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 2360996 - 2361097
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||| ||||| |||||||||||| |||| |||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  2360996 tgacctaatctgggggagagattgatatctcaaatccactatcaatgagttcttacaaagagatacaaa-tgagttacaagaaattagcttcaacaagct 2361094  T
Q  260 cac 262  Q
    |||    
T  2361095 cac 2361097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 23565085 - 23565186
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||||||| |  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  23565085 tgacctactctaggagagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagttacaagaaattagtttcaacaagct 23565183  T
Q  260 cac 262  Q
    |||    
T  23565184 cac 23565186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 126 - 262
Target Start/End: Complemental strand, 31519081 - 31518946
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggag-gagagattgatctctccaatccactat-aatgagttcttacaaagagat 223  Q
    ||||||||||||||| ||| |||||||||||||  ||||||||||||| | ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  31519081 acaccaagaaatgtttatccagttcggtccaact-tgacctactctggggagagagattgatctctccaatccactgtcaatgagttcttacaaagagat 31518983  T
Q  224 acaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    || |||| ||||||||| || ||||||||| ||||||||    
T  31518982 ac-aaatgagttacaag-aactagcttcaataagctcac 31518946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 35854082 - 35853969
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||   |||    
T  35854082 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 35853984  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  35853983 acaagaaattagctt 35853969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 27347975 - 27347860
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  27347975 agttcggtccaact-tgacctaatctgggggagagattgatctctgcaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 27347878  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||| ||||    
T  27347877 tagcttcaacaagttcac 27347860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 128 - 262
Target Start/End: Original strand, 31105385 - 31105518
Alignment:
Q  128 accaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagataca 226  Q
    ||||||||||||| | | |||||||||||||  ||| ||||||| | ||||||||| ||||||||||||||| || |||||||||||||||| |||||||    
T  31105385 accaagaaatgtttacccagttcggtccaact-tgatctactcttggggagagatttatctctccaatccaccatcaatgagttcttacaaaaagataca 31105483  T
Q  227 aaattagttacaagaaattagcttcaacaagctcac 262  Q
    || |  ||||||||||||||||||||||||||||||    
T  31105484 aa-tgggttacaagaaattagcttcaacaagctcac 31105518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 29991221 - 29991108
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||   |||    
T  29991221 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttattagaaagagatacaaaa-gggtt 29991123  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  29991122 acaagaaattagctt 29991108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 48491723 - 48491622
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||  ||||||||||||||||||||||||| |    
T  48491723 tgacctaatctgggggagagattgatctctccaatccactatcaatgagttctttcaaagagatac-aaatgggttacaagaaattagcttcaacaagtt 48491625  T
Q  260 cac 262  Q
    |||    
T  48491624 cac 48491622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 2759207 - 2759322
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| | |||||||||| ||||||||||||||| |||||||||||||||||||||| ||| | |||||||||||||    
T  2759207 agttcggtccaact-tgacctaatctggggaagagattgatatctccaatccactatcaatgagttcttacaaagagatataaa-tgagttacaagaaat 2759304  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||| ||||    
T  2759305 tagcttcaacaagttcac 2759322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 258
Target Start/End: Complemental strand, 25616012 - 25615900
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    ||||||||||||   ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||  ||||| ||||  ||||||||||||    
T  25616012 agttcggtccaaacttgacctactctggaggagagattgatctctctaatccactatcaatgagttcttacaaaatgatac-aaatgggttacaagaaat 25615914  T
Q  245 tagcttcaacaagc 258  Q
    |||||| |||||||    
T  25615913 tagcttaaacaagc 25615900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 31732979 - 31733094
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  31732979 agttcggtccaact-tgacctaatttgggggagagattgatctctccaatccagtatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 31733076  T
Q  245 tagcttcaacaagctcac 262  Q
    |||||||| |||||||||    
T  31733077 tagcttcaccaagctcac 31733094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 39731537 - 39731426
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  |||    
T  39731537 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gagt 39731439  T
Q  235 tacaagaaattag 247  Q
    |||||||||||||    
T  39731438 tacaagaaattag 39731426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 175 - 262
Target Start/End: Original strand, 47673981 - 47674068
Alignment:
Q  175 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||    
T  47673981 ggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagttcac 47674068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 48489589 - 48489479
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| |||||||| || ||||||||||| ||||  ||||||||||||    
T  48489589 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatgaatgagttattgcaaagagatac-aaatgggttacaagaaat 48489492  T
Q  245 tagcttcaacaag 257  Q
    |||||||||||||    
T  48489491 tagcttcaacaag 48489479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 36146416 - 36146532
Alignment:
Q  144 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 242  Q
    |||||||||||||||  ||||||| | ||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||  ||||| ||||    
T  36146416 ctagttcggtccaact-tgacctaatatgggggagagattgatctctcaaatccactatcaatgagttcttacaaagagatac-aaatgggttac-agaa 36146512  T
Q  243 attagcttcaacaagctcac 262  Q
    ||||||||||||||||||||    
T  36146513 attagcttcaacaagctcac 36146532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 496007 - 496108
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||||| | | |||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||  ||| |||||||||||||||||||||||    
T  496007 tgacctactataggggagagattgatctctccaatccactatcaatgagttcttataaagagatac-aaatgggttgcaagaaattagcttcaacaagct 496105  T
Q  260 cac 262  Q
    |||    
T  496106 cac 496108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 1113801 - 1113700
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||| | ||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |  |||| ||||||||||||||||||||||    
T  1113801 tgacctaatatgggggagagattgatctctccaatctactatcaatgagttcttacaaagagatacaaa-tgggttataagaaattagcttcaacaagct 1113703  T
Q  260 cac 262  Q
    |||    
T  1113702 cac 1113700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 126 - 262
Target Start/End: Original strand, 4253518 - 4253654
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagat 223  Q
    ||||||||||||||| | |||||||||||||| | ||||||||||||  ||||||||||||||||| |||||| ||| ||||||||| || |||||||||    
T  4253518 acaccaagaaatgtttacctagttcggtccaa-attgacctactctgtgggagagattgatctctctaatccattatcaatgagttctttccaaagagat 4253616  T
Q  224 acaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    | ||||   |||||| |||||||||||||||||||||||    
T  4253617 ataaaa-gggttacatgaaattagcttcaacaagctcac 4253654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 161 - 250
Target Start/End: Complemental strand, 8153486 - 8153397
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 250  Q
    ||||||| ||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| |||| |||||||||||||||||||    
T  8153486 tgacctaatctgggggagagattgatctctccaatccactatcaatgagttattacaaagagatac-aaatgagttacaagaaattagctt 8153397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 161 - 250
Target Start/End: Original strand, 25766984 - 25767074
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 250  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||  ||||||||||||||   ||||||||||||||||||    
T  25766984 tgacctactctggaggagagattgaactctccaatccactatcaatgagttcttcaaaagagatacaaaaggggttacaagaaattagctt 25767074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 14069843 - 14069946
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  14069843 agttcggtccaact-tgacctaatcttggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 14069940  T
Q  245 tagctt 250  Q
    ||||||    
T  14069941 tagctt 14069946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 14379871 - 14379974
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  14379871 agttcggtccaact-tgacctaatctaggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 14379968  T
Q  245 tagctt 250  Q
    ||||||    
T  14379969 tagctt 14379974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 41317444 - 41317559
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||   |||||||||||    
T  41317444 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatggattacaagaaat 41317541  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||  ||||||||||    
T  41317542 tagctttgacaagctcac 41317559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 4586291 - 4586204
Alignment:
Q  175 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||  ||||||| ||||||||||||||||| ||||    
T  4586291 ggagagattgatctctccaatccactatcaatgagttcttacaaagagata-aaaatgggttacaaaaaattagcttcaacaagttcac 4586204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 26417446 - 26417359
Alignment:
Q  175 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  |||||||||||||| |||||||||||||||    
T  26417446 ggagagattgatctctccaatccactatcaacgagttcttacaaagagatac-aaatgggttacaagaaattatcttcaacaagctcac 26417359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 137 - 256
Target Start/End: Original strand, 47676137 - 47676255
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||| ||| |||||||||||||  ||||||| | ||| ||||||||||||||||||| |||||||| | ||||||||||||||||||||| ||||  |||    
T  47676137 tgttgatccagttcggtccaact-tgacctaatatgggggagagattgatctctccattccactatcattgagttcttacaaagagatac-aaatgggtt 47676234  T
Q  236 acaagaaattagcttcaacaa 256  Q
    |||||||||||||||||||||    
T  47676235 acaagaaattagcttcaacaa 47676255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 18126788 - 18126687
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||| ||||| ||||||||||||  |||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| |||||| |    
T  18126788 tgacctagtctgggggagagattgattcctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttgaacaagtt 18126690  T
Q  260 cac 262  Q
    |||    
T  18126689 cac 18126687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 41649021 - 41649135
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||    
T  41649021 agttcggtccaact-tgacctaatttgggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaat 41649118  T
Q  245 tagcttcaacaagctcac 262  Q
    |||| | |||||||||||    
T  41649119 tagc-taaacaagctcac 41649135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 43864402 - 43864287
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| |||||  ||||||||||||||||||||||||||| ||| |||| |||||||||||||| ||||  |||||| |||||    
T  43864402 agttcggtccaact-tgacctaatctgggagagagattgatctctccaatccactatcaattagtttttacaaagagatac-aaatgggttacaggaaat 43864305  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||| ||||    
T  43864304 tagcttcaacaagttcac 43864287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 43504178 - 43504266
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagttacaagaaattag 247  Q
    ||||||||| ||||||||||||||| ||||||||| |||||| ||||||||||||| ||||||||||||||  ||||||||||||||||    
T  43504178 tgacctactatggaggagagattgaactctccaattcactatcaatgagttcttacaaaagagatacaaaaagagttacaagaaattag 43504266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 20344064 - 20343951
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 233  Q
    |||||| | |||||||||||||  ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  20344064 tgttcacccagttcggtccaact-tgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 20343968  T
Q  234 ttacaagaaattagctt 250  Q
    |||||||||||||||||    
T  20343967 ttacaagaaattagctt 20343951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 262
Target Start/End: Complemental strand, 23344151 - 23344018
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    ||||||||||||||| | || ||||||||||||  |||||||||||||  |||||||| || ||||||||| | ||| |||||||||| ||||||| |||    
T  23344151 acaccaagaaatgtttaccttgttcggtccaact-tgacctactctgg--gagagattaatttctccaatctattatcaatgagttctcacaaagatata 23344055  T
Q  225 caaaattagttacaagaaattagcttcaacaagctcac 262  Q
    | |||   ||||||||||||||||||||||||||||||    
T  23344054 ctaaagg-gttacaagaaattagcttcaacaagctcac 23344018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 256
Target Start/End: Complemental strand, 18396477 - 18396367
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaa 243  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||||||||| |||| ||||| ||| ||| |||||||||||||||  ||||||| |||    
T  18396477 agttcggtccaccattgacctactcttgaggagagattgatctctccaatcctctatcaatgaattctttataaagagatacaaaat--gttacaaaaaa 18396380  T
Q  244 ttagcttcaacaa 256  Q
     ||| ||||||||    
T  18396379 ataggttcaacaa 18396367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 24525526 - 24525594
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaa 228  Q
    ||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24525526 tgacctaatcttggggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaa 24525594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 250
Target Start/End: Complemental strand, 48408984 - 48408857
Alignment:
Q  126 acaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagaga 222  Q
    |||||||||||| ||||| | ||||||||| ||   |||| |||||||||||||||||| | |||||||||||||||| |||||||| || | |||||||    
T  48408984 acaccaagaaattgttcacccagttcggtctaaacttgacatactctggaggagagattaaactctccaatccactatcaatgagttatttcaaaagaga 48408885  T
Q  223 tacaaaattagttacaagaaattagctt 250  Q
    |||||||   ||||||||||||||||||    
T  48408884 tacaaaaggggttacaagaaattagctt 48408857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 246
Target Start/End: Original strand, 3904626 - 3904726
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaa 243  Q
    |||||||||||||||||||||||||||  |||||||||||||||||  || |||||| ||||||||| |||||||||||| ||||| | |||||||||||    
T  3904626 agttcggtccaacaatgacctactctgagggagagattgatctctctgat-cactatcaatgagttctttacaaagagatgcaaaagt-gttacaagaaa 3904723  T
Q  244 tta 246  Q
    |||    
T  3904724 tta 3904726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 38671232 - 38671347
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| ||| ||||| |||||| ||||||||||| ||||||||||||||||| ||||| ||||  ||||||| ||||    
T  38671232 agttcggtccaact-tgacctattttgggggatagatttatctcttcaatccactatcaatgagttcttacaaagtgatac-aaatgtgttacaataaat 38671329  T
Q  245 tagcttcaacaagctcac 262  Q
    |||||| |||||||||||    
T  38671330 tagcttaaacaagctcac 38671347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 24790009 - 24789896
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   |||||||||||||||||||||| |  |||||||||||||||| || ||||| |||| |||| ||||||||||  ||    
T  24790009 tgttcacccagttcggtccaaacttgacctactctggaggagagatagtactctccaatccactatcaaagagtttttacaaaagggatacaaaat--gt 24789912  T
Q  235 tacaagaaattagctt 250  Q
    ||||||||||||||||    
T  24789911 tacaagaaattagctt 24789896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 1560675 - 1560749
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttacaaa 218  Q
    ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||||||    
T  1560675 agttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaa 1560749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 250
Target Start/End: Complemental strand, 4178917 - 4178829
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 250  Q
    |||||| |||||||||||||||||| || | ||||||||||| ||||||||||| |||||||||||||||   ||||||||||||||||||    
T  4178917 tgacctgctctggaggagagattgaactgttcaatccactatcaatgagttctt-caaagagatacaaaa-gggttacaagaaattagctt 4178829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 262
Target Start/End: Original strand, 36574510 - 36574641
Alignment:
Q  130 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctt-acaaagagatacaa 227  Q
    ||||||||||| | | |||| ||||||| | ||||||||||| | |||  ||||||||||||||| ||||||| ||||||||||| ||||||||||| ||    
T  36574510 caagaaatgtttacccagtttggtccaa-attgacctactctag-ggatggattgatctctccaaaccactatcaatgagttctttacaaagagatataa 36574607  T
Q  228 aattagttacaagaaattagcttcaacaagctcac 262  Q
    ||   |||||||||||||||||||||||| |||||    
T  36574608 aagg-gttacaagaaattagcttcaacaaactcac 36574641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 12097875 - 12097984
Alignment:
Q  144 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagttcttacaaagagatacaaaattagttacaagaaa 243  Q
    |||||||||||||||  ||||||| ||||| ||||||||| ||||||||||||||||| || |||||       |||||||| ||||  |||||||||||    
T  12097875 ctagttcggtccaact-tgacctaatctgggggagagattcatctctccaatccactacaaagagtt-------agagatac-aaatgggttacaagaaa 12097965  T
Q  244 ttagcttcaacaagctcac 262  Q
    ||| |||||||||||||||    
T  12097966 ttaacttcaacaagctcac 12097984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 18388760 - 18388838
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  18388760 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 18388838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 18392196 - 18392274
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  18392196 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 18392274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 31518896 - 31518838
Alignment:
Q  203 aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||||||||||||||| |||| |||||||||||| ||||||||| ||||||||    
T  31518896 aatgagttcttacaaagagatac-aaatgagttacaagaaactagcttcaataagctcac 31518838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 32060322 - 32060400
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  32060322 tgttcaccaagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 32060400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 2360859 - 2360941
Alignment:
Q  19 cacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagat 101  Q
    ||||||||| |||| |||| |||| |||||||||||| ||||||||||  |||||||||||  |||||| | |||||||||||    
T  2360859 cacaagcaacaacatcaatatagacctagtctagaaaccaagtgcatatcaaaaccacaattcaaccaaggaataaacaagat 2360941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 26639484 - 26639432
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatcca 198  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||| ||||||    
T  26639484 agttcggtacaacaatgacatactatggaggagagattgatctctctaatcca 26639432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 5116758 - 5116679
Alignment:
Q  152 gtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaa 229  Q
    ||||||||||||  | || ||| ||||||||| ||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  5116758 gtccaacaatgatttgctatgggggagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 5116679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 6592340 - 6592418
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  6592340 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 6592418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 6594558 - 6594636
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  6594558 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 6594636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 30814594 - 30814530
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagtt 210  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||    
T  30814594 agttcggtccaact-tgacctaatatgggggagagattgatctctccaatccactatcaatgagtt 30814530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 5513661 - 5513760
Alignment:
Q  130 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaa 227  Q
    ||||||||||| | | ||||| |||||| | |||||||||||||||| ||||||||| |||||||| || | | ||||||||| ||||||||||||| ||    
T  5513661 caagaaatgtttacccagttcagtccaa-attgacctactctggaggtgagattgat-tctccaattcagtgtcaatgagttctttacaaagagatataa 5513758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 168; Significance: 4e-90; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 49199329 - 49199595
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49199329 taaccaaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaaccacaatctaaccaaaggataaacaaga 49199428  T
Q  101 tnnnnnnngtagagaaaa---gataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatc 196  Q
    |       ||||||||||   || ||||||||||||| || ||||| | ||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  49199429 taaagagagtagagaaaaatagacaacaacaccaagagattgttcacccagttcggtccaaccatgacctagtctggaggagagattaatctctccaatc 49199528  T
Q  197 cactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  49199529 cactatcaatgagttcttacaaagagatacaaaatgggttacaagaaattagcttcaacaagctcac 49199595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 43401661 - 43401927
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  43401661 taaccaaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaatcacaatctaaccaaaggataaacaaga 43401760  T
Q  101 tnnnnnnngtagagaaaa---gataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatc 196  Q
    |       ||||||||||   || ||||||||||||| || ||||| | ||||||||||||| |||||||||||||||||||||||| || |||||||||    
T  43401761 taaagagagtagagaaaaatagacaacaacaccaagagattgttcacccagttcggtccaaccatgacctactctggaggagagattaatttctccaatc 43401860  T
Q  197 cactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||| |||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  43401861 cactatcaatgagttcttacaaagagataaaaaatgcgttacaagaaattagcttcaacaagctcac 43401927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 46860778 - 46860517
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 100  Q
    ||||||||||||||| ||||||| ||| ||||||||| |||| ||| |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  46860778 taaccaaatgtaaataaccacaaacaacaacaacaatatagacctaatctataaaccaagtgcatagcaaaaccacaatctaaccaaaggataaacaaga 46860679  T
Q  101 tnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccact 200  Q
    |       ||| |||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  46860678 taaagagagtaaagaaaagataacaacaccaaaaaatgttcatccaattcggtccaacaatgacctactctggaggaaagattgatctctccaatccact 46860579  T
Q  201 at-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    || |||||||| |||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  46860578 atcaatgagttattacaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 46860517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 5 - 262
Target Start/End: Complemental strand, 36019148 - 36018895
Alignment:
Q  5 caaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnn 104  Q
    ||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||       
T  36019148 caaatgtaaattaccacaagcaacaataacaatctagatctaatctagaaaacaagtgtttaacaaaaccacaatctaaccaaaggataaacaagataaa 36019049  T
Q  105 nnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataa 204  Q
        ||||| |||||||||||||||||| ||||||||||| |||||||||||||||  || ||  |||| ||||||||||| ||||||||||||||||||    
T  36019048 gagagtagaaaaaagataacaacaccaaaaaatgttcatccagttcggtccaacaa--acata--ctgggggagagattgacctctccaatccactataa 36018953  T
Q  205 tgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  36018952 tgagttcttacaaagagatacaaaatgagttacaagaaattaacttcaacaagctcac 36018895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 19 - 262
Target Start/End: Original strand, 41819404 - 41819648
Alignment:
Q  19 cacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa 118  Q
    ||||||||| ||||||||| |||| |||||| | ||| ||||||||||| |||||||||||||||||||||||||||||||||       ||||||||||    
T  41819404 cacaagcaacaacaacaatatagacctagtccataaaccaagtgcatagcaaaaccacaatctaaccaaaggataaacaagataaagaaagtagagaaaa 41819503  T
Q  119 ga-taacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagttcttacaa 217  Q
     | |||||||||||| ||||||||| | |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41819504 aaataacaacaccaataaatgttcacccagtttggtccaacaatgacctactctggaggagagattgatgtctccaatccactataatgagttcttacaa 41819603  T
Q  218 agagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||  ||||||||||||||||||  ||||||||||    
T  41819604 agagatacaaaatgggttacaagaaattagcttagacaagctcac 41819648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 43403604 - 43403870
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43403604 taaccaaatgtaaataaccacaagcaataataacaatctagatctaatctagaaaacaagtgcatagcaaaaccacaatctaaccaaaggataaacaaga 43403703  T
Q  101 tnnnnnnngtagagaaaag---ataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatc 196  Q
    |       || |||||||    | ||||||| ||||| || ||||| | ||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  43403704 taaagagagtggagaaaaataaacaacaacatcaagagattgttcacccagttcggtccaaccatgacctactctggaggagagattaatctctccaatc 43403803  T
Q  197 cactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||| |||||||||||||||||||||| || || ||||||||||||| |||||||||||||||||    
T  43403804 cactatcaatgagttcttacaaagagataaaacatgagttacaagaaatgagcttcaacaagctcac 43403870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 55301834 - 55302064
Alignment:
Q  1 taaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaac-aagtgcatagaaaaaccacaatctaaccaaaggataaacaa 98  Q
    ||||||||||| ||| | ||||||||||||| ||||||||||||||| |||||||||| |||||||||| ||| |||||||  |||||||||||||||||    
T  55301834 taaccaaatgtgaataaaccacaagcaataaaaacaatctagatctaatctagaaaaccaagtgcatagcaaagccacaattcaaccaaaggataaacaa 55301933  T
Q  99 gatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatcca 198  Q
    |||       ||| ||||||||||||||||| |||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  55301934 gataaagagagtaaagaaaagataacaacactaagaaatgttcaccaagttcggtccaacaatgacctactatggaggagagattgatctctccaatcca 55302033  T
Q  199 ctat-aatgagttcttacaaagagatacaaa 228  Q
    |||| ||||| ||||||||||||||||||||    
T  55302034 ctatcaatgaattcttacaaagagatacaaa 55302064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 5 - 253
Target Start/End: Original strand, 6095468 - 6095715
Alignment:
Q  5 caaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnn 104  Q
    ||||||||||| ||||||||||||||||||||| |||| |||||||| |||  ||||| |||| |||||||||||| |||||| | |||||||||||       
T  6095468 caaatgtaaataaccacaagcaataacaacaatatagacctagtctataaacgaagtgtatagcaaaaccacaatccaaccaaggcataaacaagataaa 6095567  T
Q  105 nnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-a 203  Q
        ||| ||||||||||||||||||||||||||||||   |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |    
T  6095568 gagagtaaagaaaagataacaacaccaagaaatgttcacacagttcggtccaac-ttgacctactctggaggagagattgatctctccaatccactatca 6095666  T
Q  204 atgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 253  Q
    |||||||||||||||||||||| ||||  |||||||||||||| ||||||    
T  6095667 atgagttcttacaaagagatac-aaatgggttacaagaaattaacttcaa 6095715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 30236413 - 30236168
Alignment:
Q  17 accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaa 116  Q
    ||||||||||| ||||||||| |||| |||||||| ||| ||||||||||  |||| ||||||| |||||| | |||||||||||       ||| ||||    
T  30236413 accacaagcaacaacaacaatatagacctagtctataaaccaagtgcataacaaaaacacaatccaaccaaggtataaacaagataaagagagtaaagaa 30236314  T
Q  117 aagataacaacaccaagaaa-tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctta 214  Q
    |||||||||||||||||||| |||| | |||||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  30236313 aagataacaacaccaagaaattgttgacctagttcggtccaac-ttgacctaatctgggggagagattgatctctccaatccactatcaatgagttctta 30236215  T
Q  215 caaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  30236214 caaagagatac-aaataggttacaagaaattagcttcaacaagctcac 30236168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 54594010 - 54593747
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaagga-taaacaag 99  Q
    ||||||||| ||||| ||||||||||||||||| ||| ||||  ||||||| ||| || |||||||| |||||||||||| ||   ||||| ||||||||    
T  54594010 taaccaaatataaataaccacaagcaataacaagaatatagacatagtctataaaccatgtgcatagcaaaaccacaatccaaagcaaggaataaacaag 54593911  T
Q  100 atnnnnnnng--tagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatcc 197  Q
    ||       |  || |||||||||||||||||||||||||||||| | |||| ||||||||  |||| ||||||||||||||||||||||||||||||||    
T  54593910 ataaagagagactaaagaaaagataacaacaccaagaaatgttcacccagtttggtccaact-tgacatactctggaggagagattgatctctccaatcc 54593812  T
Q  198 actat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||| ||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||    
T  54593811 actatcaatgagttcttacaaagagatac-aaatgggttacaataaattagcttcaacaagctcac 54593747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 113 - 262
Target Start/End: Complemental strand, 46173549 - 46173400
Alignment:
Q  113 agaaaagataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagtt 210  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||| ||    
T  46173549 agaaaagataacaacaccaagaaattgttgatctagttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgaatt 46173451  T
Q  211 cttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  46173450 cttacaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 46173400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 113 - 262
Target Start/End: Complemental strand, 4570144 - 4569995
Alignment:
Q  113 agaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc 211  Q
    |||||| ||||||||||||||||||||| | | ||||||||||||   | ||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  4570144 agaaaatataacaacaccaagaaatgttgacccagttcggtccaaacttcacctactctggagtagagattgatctctccaatccactatcaatgagttc 4570045  T
Q  212 ttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||| |||| |||||||||||||||||||||| ||||||||    
T  4570044 ttacaaagagatac-aaatgagttacaagaaattagcttcaataagctcac 4569995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 34491379 - 34491255
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  34491379 tgttcacccagttcggtccaact-tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagtt 34491282  T
Q  236 acaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||||||||    
T  34491281 acaagaaattagcttcaacaagctcac 34491255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 7762433 - 7762308
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||    
T  7762433 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagtt 7762335  T
Q  236 acaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||| ||||    
T  7762334 acaagaaattagcttcaacaagttcac 7762308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 126 - 262
Target Start/End: Complemental strand, 32891282 - 32891147
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    ||||||||||||| | ||| |||||||||||||| |||||||||| || ||||||||| |||||||||||||||||| || |||||||||||||||||||    
T  32891282 acaccaagaaatgattatccagttcggtccaaca-tgacctactccgggggagagatttatctctccaatccactatcaacgagttcttacaaagagata 32891184  T
Q  225 caaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||| | |||||||||||||||||||||||||||||||    
T  32891183 caaa-tgagttacaagaaattagcttcaacaagctcac 32891147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 55 - 246
Target Start/End: Complemental strand, 40913546 - 40913352
Alignment:
Q  55 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa---gataacaacaccaagaaat-gttcatctagttc 150  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||        |||||||||   || || |||||||||| || ||| | | |||||    
T  40913546 aacaagtgcatagcaaaaccacaatctaaccaaaggataaacaagataaagagattagagaaaaatagacaataacaccaagagattgttgacccagttc 40913447  T
Q  151 ggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaatta 246  Q
    ||||||||  ||||||| ||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  40913446 ggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcgatgagttcttacaaagagatac-aaatgagttacaagaaatta 40913352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 7764608 - 7764507
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||||| |    
T  7764608 tgacctactctggaggagagattcatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagttacaagaaattagctttaacaagtt 7764510  T
Q  260 cac 262  Q
    |||    
T  7764509 cac 7764507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 9581450 - 9581325
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  |||    
T  9581450 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggtt 9581352  T
Q  236 acaagaaattagcttcaacaagctcac 262  Q
    | ||||||||||||| |||||||||||    
T  9581351 aaaagaaattagcttaaacaagctcac 9581325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 40735541 - 40735426
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| | ||||||| ||||    
T  40735541 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaactggttacaataaat 40735444  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||||||||    
T  40735443 tagcttcaacaagctcac 40735426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 19683889 - 19684002
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  19683889 tgttcacccagttcggtccaaacttgacctactatggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 19683987  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  19683988 acaagaaattagctt 19684002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 29811012 - 29810911
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| |    
T  29811012 tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagtt 29810914  T
Q  260 cac 262  Q
    |||    
T  29810913 cac 29810911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 45095331 - 45095218
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  45095331 tgttcacccagttcggtccaaacttgacctactctagaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 45095233  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  45095232 acaagaaattagctt 45095218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 29813221 - 29813106
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||| ||||| | ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||  ||||||||||||    
T  29813221 agttcggtccaaca-tgaccaaatctgggggagagattgatctctccaatccactataaatgagttcttacaaagagatgc-aaatgggttacaagaaat 29813124  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||| ||||    
T  29813123 tagcttcaacaagttcac 29813106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 44331703 - 44331588
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||   |||||||||||    
T  44331703 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaataagttcttacaaagagatac-aaatggcttacaagaaat 44331606  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||||||||    
T  44331605 tagcttcaacaagctcac 44331588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 51398972 - 51398857
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| ||||||||  |||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||    
T  51398972 agttcggtccaact-tgacctaatctgggggagagataaatctctccaatccactatcaatgagttcttacaaagagatacaaa-tgagttacaagaaat 51398875  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||| ||||    
T  51398874 tagcttcaacaagttcac 51398857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 126 - 262
Target Start/End: Original strand, 53921493 - 53921628
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    |||| |||||||||| ||| ||||||||| |||  ||| |||||| || |||||||||||||||||||||||||||| ||||||||||||||||  ||||    
T  53921493 acactaagaaatgtttatccagttcggtcaaact-tgatctactccgggggagagattgatctctccaatccactatcaatgagttcttacaaaatgata 53921591  T
Q  225 caaaattagttacaagaaattagcttcaacaagctcac 262  Q
    | |||| ||||||||||||||||||| |||||||||||    
T  53921592 c-aaatgagttacaagaaattagctttaacaagctcac 53921628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 47304543 - 47304294
Alignment:
Q  19 cacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtaga----- 113  Q
    ||||||||| ||||| ||| |||| |||||||| ||| ||||||||||| |||||||||||| ||| || | |||||||||||       | | |         
T  47304543 cacaagcaacaacaataatatagacctagtctataaaccaagtgcatagcaaaaccacaatccaactaaggaataaacaagataaagaaagcaaaagaaa 47304444  T
Q  114 -gaaaagataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagtt 210  Q
     ||||||||||||||||||| |||| ||| | | ||||||||| |||  ||||||| ||| | |||||||||||||||||||||||||||| ||||||||    
T  47304443 agaaaagataacaacaccaataaattgttgacccagttcggtcaaact-tgacctaatcttggggagagattgatctctccaatccactatcaatgagtt 47304345  T
Q  211 cttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||| ||||||||| | ||  ||||||||| |||| |||||||||||||||    
T  47304344 cttacgaagagatac-agatgggttacaagatattaacttcaacaagctcac 47304294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 760991 - 760890
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  |||||||||||||||||| ||||||||    
T  760991 tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaattagcttaaacaagct 760893  T
Q  260 cac 262  Q
    |||    
T  760892 cac 760890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 259
Target Start/End: Complemental strand, 16499187 - 16499075
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||  || |||||||||    
T  16499187 agttcggtccaact-taacctactctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagata-taaatgggtaacaagaaat 16499090  T
Q  245 tagcttcaacaagct 259  Q
    |||||||||||||||    
T  16499089 tagcttcaacaagct 16499075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 250
Target Start/End: Complemental strand, 37408602 - 37408513
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 250  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||    
T  37408602 tgacctactctggaggagagattgatctcttcaatccactatcaatgagttcttacaaagagatacaaaa-gggttacaagaaattagctt 37408513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 22835012 - 22835127
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||    
T  22835012 agttcggtccaact-tgacctaatatggcggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaat 22835109  T
Q  245 tagcttcaacaagctcac 262  Q
    |||||| |||||||||||    
T  22835110 tagcttaaacaagctcac 22835127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 40734656 - 40734541
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||    
T  40734656 agttcggtccaact-tgacctaatttgggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgtgttacaagaaat 40734559  T
Q  245 tagcttcaacaagctcac 262  Q
    ||| ||||||||||||||    
T  40734558 taggttcaacaagctcac 40734541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 801260 - 801148
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| ||||||||||||| ||||||||||||||  |||    
T  801260 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaatgagttcttacaaaagagatacaaaaagagt 801161  T
Q  235 tacaagaaattag 247  Q
    |||||||||||||    
T  801160 tacaagaaattag 801148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 44700487 - 44700603
Alignment:
Q  144 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 242  Q
    |||||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||    
T  44700487 ctagttcggtccaact-tgacctaatgtgg-ggagagattgatctctccaatccactatcaaagagttcttacaaagagatac-aaataggttacaagaa 44700583  T
Q  243 attagcttcaacaagctcac 262  Q
    |||||||||||||| |||||    
T  44700584 attagcttcaacaaactcac 44700603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 5258144 - 5258257
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||   |||    
T  5258144 tgttcaccaagttcggtccaaacttgacctactctggagaagagattgaactctccaatccactatcaatgagttcttccaaagagatacaaaa-gggtt 5258242  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  5258243 acaagaaattagctt 5258257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 23197939 - 23198052
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||| ||||||||||   |||    
T  23197939 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaattcactatcaatgagttcttacaaaaagatacaaaa-gggtt 23198037  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  23198038 acaagaaattagctt 23198052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 23200138 - 23200251
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||| ||||||||||   |||    
T  23200138 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaattcactatcaatgagttcttacaaaaagatacaaaa-gggtt 23200236  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  23200237 acaagaaattagctt 23200251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 39153385 - 39153486
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||| ||||| |||||||||| ||||||||||||||||| |||||||||||| |||| ||||| |||| ||||||||||||||||||| ||||||||    
T  39153385 tgacctaatctgggggagagattgttctctccaatccactatcaatgagttcttataaagggatac-aaatgagttacaagaaattagcttaaacaagct 39153483  T
Q  260 cac 262  Q
    |||    
T  39153484 cac 39153486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 29196396 - 29196511
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||| ||||||||    
T  29196396 agttcggtccaact-tgacctaatttgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttccaagaaat 29196493  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||  ||||||||||    
T  29196494 tagctttgacaagctcac 29196511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 5260323 - 5260436
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||| ||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||   |||    
T  5260323 tgttcaccaagttcggtccaaacttgacctactttggagaagagattgaactctccaatccactatcaatgagttcttccaaagagatacaaaa-gggtt 5260421  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  5260422 acaagaaattagctt 5260436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 7780028 - 7780114
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagttacaagaaattag 247  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||   |||||||||||||||    
T  7780028 tgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa--ggttacaagaaattag 7780114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 29682517 - 29682402
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||| ||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  || |||||||||    
T  29682517 agttcggtccaact-tgatctaatctaggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggtgacaagaaat 29682420  T
Q  245 tagcttcaacaagctcac 262  Q
    |||||| |||||||||||    
T  29682419 tagcttaaacaagctcac 29682402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 31314603 - 31314488
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| ||||| |||||||||||||||||||||| || ||||||||||||| ||||||||| |  ||||||||||||    
T  31314603 agttcggtccaact-tgacctaatatgggggagatattgatctctccaatccactatcaaagagttcttacaaaaagatacaaa-tgggttacaagaaat 31314506  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||| ||||    
T  31314505 tagcttcaacaagatcac 31314488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 32744446 - 32744561
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| ||| ||||| |||||| ||||||||||| || |||||||||||||| |||||||| | |||||||||||||    
T  32744446 agttcggtccaact-tgacctaatctgggggatagatttatctcttcaatccactatcaaagagttcttacaaagtgatacaaa-tgagttacaagaaat 32744543  T
Q  245 tagcttcaacaagctcac 262  Q
    |||||| |||||||||||    
T  32744544 tagcttaaacaagctcac 32744561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 9636150 - 9636236
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattag 247  Q
    ||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||   |||||||||||||||    
T  9636150 tgacctactttggaggagagattgaactctccaatccactatcaatgagttcttacaaaaagatacaaaa-gggttacaagaaattag 9636236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 5236481 - 5236581
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||| ||||| ||| ||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| |    
T  5236481 tgacctaatctgg-ggaaagattgatctctcgaatccattatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagtt 5236578  T
Q  260 cac 262  Q
    |||    
T  5236579 cac 5236581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 260
Target Start/End: Complemental strand, 33192009 - 33191877
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctt-acaaagagat 223  Q
    ||||||| ||||||| | | ||||  ||||||||||||||| |||||||| ||||||||||||||| |||||||||| ||||||||||| ||||||| ||    
T  33192009 acaccaaaaaatgtttaccaagttttgtccaacaatgacctcctctggag-agagattgatctctctaatccactatcaatgagttctttacaaagacat 33191911  T
Q  224 acaaaattagttacaagaaattagcttcaacaagctc 260  Q
    | ||   | |||||||||| |||||||||||||||||    
T  33191910 aaaa---tggttacaagaacttagcttcaacaagctc 33191877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 9666476 - 9666591
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  | ||||| ||||| ||||||||  |||||||||||||||||| || || ||||||||||||| || ||| | |||||||||||||    
T  9666476 agttcggtccaacttt-acctaatctgggggagagatcaatctctccaatccactatcaaagaattcttacaaagaggtataaa-tgagttacaagaaat 9666573  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||||||||    
T  9666574 tagcttcaacaagctcac 9666591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 125 - 263
Target Start/End: Original strand, 35138694 - 35138832
Alignment:
Q  125 aacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagaga 222  Q
    |||||||||||||||| |||   |||||| ||||||||||||||| | | || ||||||| ||||| | ||||||||| ||||||||| |||||||||||    
T  35138694 aacaccaagaaatgtttatccgattcggttcaacaatgacctacttttg-ggggagattgttctcttccatccactatcaatgagttctttacaaagaga 35138792  T
Q  223 tacaaaattagttacaagaaattagcttcaacaagctcacc 263  Q
    |||||||  |||| |||||||||| ||||||||| ||||||    
T  35138793 tacaaaa-gagttgcaagaaattaacttcaacaaactcacc 35138832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 260
Target Start/End: Complemental strand, 20937927 - 20937701
Alignment:
Q  35 aatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaaga 134  Q
    |||||||||||| ||||  || |||||| | || |||| ||||||| |||||||  |||||||||||       |||||||||||| ||| |||| ||      
T  20937927 aatctagatctaatctattaatcaagtgtaaagtaaaatcacaatcgaaccaaataataaacaagataaagagagtagagaaaagagaaccacacaaaat 20937828  T
Q  135 aat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaatt 231  Q
    ||| ||| | ||||||| ||||||| ||||| |||| ||| |||  ||||||||||||||||| | ||| ||||||||| || |||||||||||||||      
T  20937827 aattgtttacctagttctgtccaactatgacatactttgggggaacgattgatctctccaatcta-tatcaatgagttcttttcaaagagatacaaaa-g 20937730  T
Q  232 agttacaagaaattagcttcaacaagctc 260  Q
     |||||||||||||| |||||||||||||    
T  20937729 ggttacaagaaattaacttcaacaagctc 20937701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 246
Target Start/End: Original strand, 4055773 - 4055874
Alignment:
Q  146 agttcggtccaacaatgacctac-tctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaaaattagttacaagaa 242  Q
    ||||||| ||||||||||||||| ||||| |||||||  ||||||| ||||||||||| |||||||| |||||||||||||||||||   ||||||||||    
T  4055773 agttcggcccaacaatgacctacatctgggggagaga--gatctcttcaatccactatcaatgagtttcttacaaagagatacaaaagaggttacaagaa 4055870  T
Q  243 atta 246  Q
    ||||    
T  4055871 atta 4055874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 6716667 - 6716554
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  6716667 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 6716570  T
Q  235 tacaagaaattagctt 250  Q
    ||||||||||||||||    
T  6716569 tacaagaaattagctt 6716554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 54635292 - 54635179
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  54635292 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 54635195  T
Q  235 tacaagaaattagctt 250  Q
    ||||||||||||||||    
T  54635194 tacaagaaattagctt 54635179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 31340268 - 31340326
Alignment:
Q  203 aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||    
T  31340268 aatgagttcttacaaagagatacaaa-tgagttacatgaaattagcttcaacaagctcac 31340326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 45283145 - 45283071
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttacaaa 218  Q
    ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||||||    
T  45283145 agttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaa 45283071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 23391919 - 23392034
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| ||||||||| |||||| ||||||||||| || |||||||| ||||| ||||| ||||  ||||||||||||    
T  23391919 agttcggtccaact-tgacctaatttgggggagagatttatctctacaatccactatcaaagagttcttgcaaagtgatac-aaatgggttacaagaaat 23392016  T
Q  245 tagcttcaacaagctcac 262  Q
    || ||| |||||||||||    
T  23392017 tatcttaaacaagctcac 23392034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 109 - 263
Target Start/End: Complemental strand, 39127745 - 39127589
Alignment:
Q  109 gtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatcca-ctat-aatg 206  Q
    |||||||||| | || || | ||||||| ||| ||  ||||| ||||||||||||||| ||||||||||||||||||||| || ||||||  ||| ||||    
T  39127745 gtagagaaaaaagaataatatcaagaaaagtttattaagttcagtccaacaatgacctgctctggaggagagattgatctttcaaatccatttatcaatg 39127646  T
Q  207 agtt-cttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcacc 263  Q
    ||||  |||| || ||||||||||  |  || ||||||||||||||||||||||||||    
T  39127645 agttatttacgaaaagatacaaaa-aaactataagaaattagcttcaacaagctcacc 39127589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 246
Target Start/End: Original strand, 4075480 - 4075581
Alignment:
Q  146 agttcggtccaacaatgacctac-tctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaaaattagttacaagaa 242  Q
    ||||||| ||||||||||||||| ||||| ||||||  |||||||||||||||||||| || ||||| ||||||||| |||||||||   ||||||||||    
T  4075480 agttcggcccaacaatgacctacatctgggggagag--tgatctctccaatccactatcaaagagtttcttacaaagtgatacaaaagaggttacaagaa 4075577  T
Q  243 atta 246  Q
    ||||    
T  4075578 atta 4075581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 262
Target Start/End: Original strand, 5433901 - 5434001
Alignment:
Q  156 aacaatgacctactctggaggagagattgatctctccaatccactataatgagttc-ttacaaagagatacaaaattagttacaagaaattagcttcaac 254  Q
    |||||||||||||| |||||||||||||||||||||||||||||        |||| ||||||||||||| ||||   |||||||||||||||||| |||    
T  5433901 aacaatgacctactatggaggagagattgatctctccaatccac------cggttctttacaaagagatataaaa-gggttacaagaaattagctttaac 5433993  T
Q  255 aagctcac 262  Q
    ||||||||    
T  5433994 aagctcac 5434001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 27305720 - 27305775
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat 202  Q
    |||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  27305720 agttcggtccaa-attgacctactttggaggagagattgatctctccaatccactat 27305775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 31340102 - 31340186
Alignment:
Q  17 accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagat 101  Q
    ||||||||||| ||||| ||| |||| |||||||| ||| ||||||||||| |||||||||||| ||| || | |||||||||||    
T  31340102 accacaagcaacaacaataatatagacctagtctataaaccaagtgcatagcaaaaccacaatccaactaaggaataaacaagat 31340186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 3617618 - 3617540
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  3617618 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 3617540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 25637586 - 25637517
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  25637586 agttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 25637517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 51352150 - 51352235
Alignment:
Q  176 gagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||| |||||||| | |||||||| ||||||||| |||||||  | |||||||||||||| ||| || ||||||||    
T  51352150 gagagattgatctctcaaatccactctcaatgagttattacaaagaaatacaaa--tggttacaagaaattaactttaaaaagctcac 51352235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 4598532 - 4598601
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  4598532 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 4598601  T

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Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 10056378 - 10056309
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10056378 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10056309  T

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Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 10058600 - 10058531
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10058600 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10058531  T

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Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 10060822 - 10060753
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10060822 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10060753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 10063044 - 10062975
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10063044 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10062975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 10065266 - 10065197
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10065266 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10065197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 10211554 - 10211485
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10211554 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10211485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 23410353 - 23410454
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||| | ||| ||||||||| |||||||||||||| |||  | |||||||||||||| ||||| ||||  |||| | ||||||||||| ||||||||    
T  23410353 tgacctaatttgggggagagatttatctctccaatccattatctaagagttcttacaaagtgatac-aaatgggttatacgaaattagcttaaacaagct 23410451  T
Q  260 cac 262  Q
    |||    
T  23410452 cac 23410454  T

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Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 2075065 - 2075140
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat 202  Q
    ||||| ||||||||| | | |||||| ||||||  ||||||||||| | ||||||||||||||||| ||||||||||    
T  2075065 acacccagaaatgtttacccagttcgatccaact-tgacctactctcggggagagattgatctctcaaatccactat 2075140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 10209319 - 10209265
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10209319 tgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10209265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 4600753 - 4600822
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   ||||||||||| |||||||| |||  ||||||||||||||||  |||||||||||    
T  4600753 agttcggtccaaacttgacctactctagaggagagtttgtactctccaatccactatcaaatgagttctt 4600822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 5270661 - 5270580
Alignment:
Q  17 accacaagcaataacaaca-atctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaaca 97  Q
    ||||||||||| ||||| | ||||||||||| ||||| || |||||| |  | |||||||||||| |||||||| |||||||    
T  5270661 accacaagcaacaacaatagatctagatctaatctagcaaccaagtgtaatgcaaaaccacaatcgaaccaaagaataaaca 5270580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 256
Target Start/End: Complemental strand, 24635345 - 24635306
Alignment:
Q  216 aaagagatacaaaattagttacaagaaattagcttcaacaa 256  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  24635345 aaagagatacaaaat-agttacaaaaaattagcttcaacaa 24635306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 260
Target Start/End: Original strand, 25491003 - 25491091
Alignment:
Q  171 tggaggagagattgatctctccaatccactat-aatgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaagctc 260  Q
    |||||||||||  |||||||||| | |||||| ||||| ||||| ||||||||||||||||  ||| | ||||||| |||||||||||||||    
T  25491003 tggaggagaga--gatctctccacttcactatcaatgatttctttacaaagagatacaaaaggagt-ataagaaatcagcttcaacaagctc 25491091  T

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Target: chr4 (Bit Score: 166; Significance: 7e-89; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 12073680 - 12073435
Alignment:
Q  17 accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaa 116  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||||||  ||||||||||||||||||||| |||||||||||       ||| ||||    
T  12073680 accacaagcaacaacaacaatctagatctaatctagaaaccaagtgcataacaaaaccacaatctaaccaaagaataaacaagataaagagagtaaagaa 12073581  T
Q  117 aagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac 215  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  12073580 aagataacaacaccaagaaatgttcacctagttcggtccaacaatgacctactctggaagagagattgatctctccaatccactatcaatgagttcttac 12073481  T
Q  216 aaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||    
T  12073480 aaagagatac-aaatgagttacaataaattagcttcaacaagctcac 12073435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 5 - 262
Target Start/End: Complemental strand, 41964713 - 41964458
Alignment:
Q  5 caaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnn 104  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||       
T  41964713 caaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaaccacaatctaaccaaaggataaacaagataga 41964614  T
Q  105 nnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-a 203  Q
        ||| |||||||||||||||||||||||||| ||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |    
T  41964613 ga--gtaaagaaaagataacaacaccaagaaatgctcacccagttcggtccaact-tgacctactctggaggagagattgatctctccaatccactatca 41964517  T
Q  204 atgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||| ||||||||||  ||||||| |||||||||| |||||||||||    
T  41964516 atgagttcttacaaagggatacaaaatgggttacaataaattagcttaaacaagctcac 41964458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 2210022 - 2209756
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  2210022 taaccaaatgtaaataaccacaaacaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaaccacaatctaaccaaatgataaacaaga 2209923  T
Q  101 tnnnnnnngtagagaaaa---gataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatc 196  Q
    |       ||||||||||   || ||||||||||||| || ||||| | ||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  2209922 taaagagagtagagaaaaatagacaacaacaccaagagattgttcacccagttcggtccaaccatgacctactctggaggagagattaatctctccaatc 2209823  T
Q  197 cactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  2209822 cactatcaatgagttcttacaaagagatacaaaatgggttacaagaaattagcttcaacaagctcac 2209756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 5 - 262
Target Start/End: Complemental strand, 379680 - 379423
Alignment:
Q  5 caaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnn 104  Q
    ||||||||||| ||||||| ||| ||||||||| |||| |||||||| ||| ||||||||||  |||||||||||||||||||||||||||||||||       
T  379680 caaatgtaaataaccacaaacaacaacaacaatatagacctagtctataaaccaagtgcataacaaaaccacaatctaaccaaaggataaacaagataaa 379581  T
Q  105 nnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-a 203  Q
        ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  379580 gagagtaaagaaaagataacaacaccaagaaatgttcatccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactatca 379481  T
Q  204 atgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    || ||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||||    
T  379480 attagttcttacaaagcgatac-aaatgggttacaagaaattagcttcaacaagctcac 379423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 50673712 - 50673972
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaagga-taaacaag 99  Q
    ||||||||||||||| |||| |||||||||||||||| ||||||||||||| ||  ||||||||||| |||||||||||| ||   ||||| ||||||||    
T  50673712 taaccaaatgtaaatcaccataagcaataacaacaatatagatctagtctataat-caagtgcatagcaaaaccacaatccaaagcaaggaataaacaag 50673810  T
Q  100 atnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccac 199  Q
    ||       ||| |||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  50673811 ataaagagagtaaagaaaagataacaacaccaagaaatgttcacctagttcggtccaac-ttgacctactctggaggagagattgatctctccaatccac 50673909  T
Q  200 tat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  50673910 tatcaatgagttcttacaaagagatac-aaatgagttacaagaaattagcttcaacaagctcac 50673972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 69 - 262
Target Start/End: Complemental strand, 46703737 - 46703543
Alignment:
Q  69 aaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctac 168  Q
    |||||||||||||||||||| ||||||||||||       ||| |||||||||||||||||||||||||||||| | | |||||||||||||||||||||    
T  46703737 aaaaccacaatctaaccaaatgataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccaattcggtccaacaatgacctac 46703638  T
Q  169 tctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||    
T  46703637 tctggaggagagattgatctctccaatccactataaatgagttcttacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcac 46703543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 40632749 - 40632488
Alignment:
Q  1 taaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaag 99  Q
    ||||||||||||||| | |||||||||||||||||||| |||| |||||||| | | ||||||||| | |||||||||||  ||||||||||||||||||    
T  40632749 taaccaaatgtaaataaaccacaagcaataacaacaatatagacctagtctatataccaagtgcatggcaaaaccacaattcaaccaaaggataaacaag 40632650  T
Q  100 atnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccac 199  Q
    ||       ||| | |||||||||||||||||||||||||| | | |||||||||||||  |||| |||| | |||||||||||||||||||||||||||    
T  40632649 ataaagagagtaaaaaaaagataacaacaccaagaaatgtttacccagttcggtccaac-ttgacttactttagaggagagattgatctctccaatccac 40632551  T
Q  200 tat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  40632550 tatcaatgagttcttacaaagagatac-aaataggttacaagaaattagcttcaacaagctcac 40632488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 17 - 261
Target Start/End: Complemental strand, 35662728 - 35662485
Alignment:
Q  17 accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaa 116  Q
    |||| |||||| ||||||||| ||||  ||||||| ||| ||||||||||| |||||||||||| |||||| | |||||||||||       ||| ||||    
T  35662728 accataagcaacaacaacaatatagacatagtctataaaccaagtgcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaaagaa 35662629  T
Q  117 aagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac 215  Q
    |||||||||||||||| ||||||||||  |||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||    
T  35662628 aagataacaacaccaaaaaatgttcattcagttcggtccaac-ttgacctactcttgaggagatattgatctctccaatccactatcaatgagttcttac 35662530  T
Q  216 aaagagatacaaaattagttacaagaaattagcttcaacaagctca 261  Q
    |||||||||| |||| ||||||||||||||||||||||||| ||||    
T  35662529 aaagagatac-aaatgagttacaagaaattagcttcaacaaactca 35662485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 55 - 262
Target Start/End: Complemental strand, 6656205 - 6655999
Alignment:
Q  55 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtc 154  Q
    ||||||||||||| |||||||||||| ||| ||||||||||||||||       ||| |||||||||||||||||||||||||||||| | | |||||||    
T  6656205 aacaagtgcatagcaaaaccacaatccaacaaaaggataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccaattcggtc 6656106  T
Q  155 caacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 253  Q
    ||||  |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  6656105 caact-tgacctactctggatgagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttacaagaaattagcttcaa 6656008  T
Q  254 caagctcac 262  Q
    |||| ||||    
T  6656007 caagttcac 6655999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 61 - 260
Target Start/End: Complemental strand, 8665651 - 8665453
Alignment:
Q  61 tgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaa 160  Q
    ||||||| |||||||||||| |||||| | |||||||||||       ||| ||||||||||||||||||||||||||| || |||||| ||||||||      
T  8665651 tgcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgtacacctagtttggtccaact- 8665553  T
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  8665552 tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagct 8665454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 30 - 262
Target Start/End: Original strand, 26699335 - 26699568
Alignment:
Q  30 acaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacac 129  Q
    ||||||||||||||||| |||||||  ||||||||||| ||||||| |||  |||||||| |||||||||||       ||| ||||||||||||  |||    
T  26699335 acaacaatctagatctaatctagaatccaagtgcatagcaaaaccataattgaaccaaagaataaacaagataaagagagtaaagaaaagataacggcac 26699434  T
Q  130 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaa 227  Q
     ||||||| || | | ||||||||||||||||||||||||||||   |||||||||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  26699435 taagaaatttttacccagttcggtccaacaatgacctactctgggatagagattgatctctccaatccattataaatgagttctttacaaagagatacaa 26699534  T
Q  228 aattagttacaagaaattagcttcaacaagctcac 262  Q
    ||  |||||||||||||||||||||||||||||||    
T  26699535 aa-gagttacaagaaattagcttcaacaagctcac 26699568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 19 - 256
Target Start/End: Complemental strand, 33990131 - 33989893
Alignment:
Q  19 cacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa 118  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||||||| ||| ||| |||  |||||||| |||||||||||       ||||| ||||    
T  33990131 cacaagcaacaacaacaatctagatctaatctagaaaccaagtgcatagcaaatccagaattgaaccaaagaataaacaagataaagagagtagaaaaaa 33990032  T
Q  119 gataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagtt-cttaca 216  Q
     |||| |||||||||||||||| | | |||||  ||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||  |||||    
T  33990031 tataataacaccaagaaatgtttacccagttcaatccaagaatgacctactctggtggagagattgatctctccaatccactattaacgagttatttaca 33989932  T
Q  217 aagagatacaaaattagttacaagaaattagcttcaacaa 256  Q
    |||||||||||||  | |||||||||||||||||||||||    
T  33989931 aagagatacaaaagga-ttacaagaaattagcttcaacaa 33989893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 61 - 262
Target Start/End: Complemental strand, 8648382 - 8648182
Alignment:
Q  61 tgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaa 160  Q
    ||||||| |||||||||||| |||||| | |||||||||||       ||| |||||||||||||||||||||||||||||| | |||| ||||||||      
T  8648382 tgcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagtttggtccaact- 8648284  T
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||  |||| ||||||||||||||||||| ||    
T  8648283 tgacctactctggaggagagattgatctctccaatccaatatcaatgagttcttacaaagagatac-aaatgggttataagaaattagcttcaacaaact 8648185  T
Q  260 cac 262  Q
    |||    
T  8648184 cac 8648182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 262
Target Start/End: Complemental strand, 41639673 - 41639469
Alignment:
Q  57 caagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtcca 156  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||       ||| ||||| ||||||||||||||||||||||||   |||||||||||    
T  41639673 caagtgcatagcaaaaccacaattcaaccaaaggataaacaagataaagagagtaaagaaacgataacaacaccaagaaatgttcactcagttcggtcca 41639574  T
Q  157 acaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaaca 255  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||| ||||  ||||||||||||||||||||| |    
T  41639573 act-tgacctactctggaggagagattgatctctccaatccactatcgatgagttcttacaaatagatac-aaatgggttacaagaaattagcttcaaaa 41639476  T
Q  256 agctcac 262  Q
    || ||||    
T  41639475 agttcac 41639469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 12119815 - 12119582
Alignment:
Q  34 caatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagata----acaacac 129  Q
    ||||||||||||| ||||||||  |||||||||| ||||||||||||  |||||||  ||||||||||       |||||||||| |||    |||||||    
T  12119815 caatctagatctaatctagaaactaagtgcatagcaaaaccacaatcggaccaaagactaaacaagataaagagagtagagaaaaaatagatgacaacac 12119716  T
Q  130 caagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagataca 226  Q
    |||||||| ||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  12119715 caagaaattgttcacctagttcggtccaacaatgacctactcttg-ggagagattgatctctccaatccactataaatgagttctttacaaagagataca 12119617  T
Q  227 aaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||   ||||||||||||||||||||| ||| ||||    
T  12119616 aaa-gggttacaagaaattagcttcaaaaagttcac 12119582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 55 - 262
Target Start/End: Original strand, 27416884 - 27417090
Alignment:
Q  55 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtc 154  Q
    ||||||||||| | |||||||||||| |||||||| |||||||||||       ||| ||| ||||||||||||||||  | |||| |   |||||||||    
T  27416884 aacaagtgcatggcaaaaccacaatccaaccaaagaataaacaagataaagagagtaaagacaagataacaacaccaaagattgttgactcagttcggtc 27416983  T
Q  155 caacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 253  Q
    ||||  ||||||| ||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||  |||||||||||||||||||||    
T  27416984 caact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagtttttacaaagagatac-aaatgggttacaagaaattagcttcaa 27417081  T
Q  254 caagctcac 262  Q
    |||||||||    
T  27417082 caagctcac 27417090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 262
Target Start/End: Original strand, 50262617 - 50262826
Alignment:
Q  57 caagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa---gataacaacaccaagaaat-gttcatctagttcgg 152  Q
    ||||||||| | |||||||||||| ||  || | |||||||||||       ||||||||||   || ||||||||||||| || ||||| | |||||||    
T  50262617 caagtgcatggcaaaaccacaatccaagtaaggaataaacaagataaaaagagtagagaaaaatagacaacaacaccaagagattgttcacccagttcgg 50262716  T
Q  153 tccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttc 251  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||| ||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  50262717 tccaacaatgacctactctggaggaaagattgatatctccaatcaactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttc 50262815  T
Q  252 aacaagctcac 262  Q
    |||||||||||    
T  50262816 aacaagctcac 50262826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 58 - 262
Target Start/End: Complemental strand, 26364483 - 26364279
Alignment:
Q  58 aagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaat-gttcatctagttcggtcca 156  Q
    ||||| |||| |||||||||||| || ||| | |||||||||||       ||| ||||||||||||||||||||||||| ||| | | ||||| ||| |    
T  26364483 aagtgtatagcaaaaccacaatccaagcaaggaataaacaagataaagagagtaaagaaaagataacaacaccaagaaattgttgacccagttcagtcaa 26364384  T
Q  157 acaatgacctactctggaggagagattgatctctccaatccacta-taatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaaca 255  Q
    ||  ||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  26364383 act-tgacctaatctgggggagagattgatctctccaatccactattaatgagttcttacaaagagatac-aaatgagttacaagaaattagcttcaaca 26364286  T
Q  256 agctcac 262  Q
    || ||||    
T  26364285 agttcac 26364279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 115 - 262
Target Start/End: Complemental strand, 54883210 - 54883063
Alignment:
Q  115 aaaagataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttct 212  Q
    ||||||||||||||||||||||| ||| | | |||||||||||||  |||| || ||||||||||||||||||| |||||||||||||| ||||||||||    
T  54883210 aaaagataacaacaccaagaaattgttgacccagttcggtccaact-tgacttaatctggaggagagattgatccctccaatccactatcaatgagttct 54883112  T
Q  213 tacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  54883111 tacaaagagatacaaa-tgggttacaagaaattagcttcaacaagctcac 54883063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 137 - 262
Target Start/End: Original strand, 56178637 - 56178762
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  56178637 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 56178735  T
Q  236 acaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||| ||||    
T  56178736 acaagaaattagcttcaacaagttcac 56178762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 69 - 260
Target Start/End: Complemental strand, 33090116 - 33089923
Alignment:
Q  69 aaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaa-gaaatgttcatctagttcggtccaacaatgaccta 167  Q
    |||||||||||| |||||||  |||||||||||       | |||||||||| ||||||  ||| ||| |||| ||||||| |||||||||||| |||||    
T  33090116 aaaaccacaatcgaaccaaaaaataaacaagataaagagagcagagaaaagagaacaacttcaaagaattgtttatctagtccggtccaacaataaccta 33090017  T
Q  168 ctctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaattagcttcaacaagctc 260  Q
    |||| ||||||||||||||||||| |||||||||| ||||||||| ||||| |||||||||||| | |||| || ||||||||||||||||||||    
T  33090016 ctctagaggagagattgatctctctaatccactatcaatgagttctttacagagagatacaaaa-tggttataataaattagcttcaacaagctc 33089923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 48893648 - 48893763
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||| |||| |||||||||||||    
T  48893648 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaaagagttcttacaaagagatac-aaatgagttacaagaaat 48893745  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||||||||    
T  48893746 tagcttcaacaagctcac 48893763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 9927468 - 9927583
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  9927468 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 9927565  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||| ||||    
T  9927566 tagcttcaacaagttcac 9927583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 26175646 - 26175761
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  26175646 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 26175743  T
Q  245 tagcttcaacaagctcac 262  Q
    ||| ||||||||||||||    
T  26175744 tagtttcaacaagctcac 26175761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 126 - 261
Target Start/End: Complemental strand, 31474329 - 31474195
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    ||||||||| ||||| | | |||||||||||||  ||| ||||||||| ||||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  31474329 acaccaagatatgtttacccagttcggtccaact-tgatctactctggtggagagatttatctctccaatcaactatcaatgagttcttacaaagagata 31474231  T
Q  225 caaaattagttacaagaaattagcttcaacaagctca 261  Q
    |||| | ||||||||||||||||||||||||| ||||    
T  31474230 caaa-tgagttacaagaaattagcttcaacaaactca 31474195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 129 - 262
Target Start/End: Original strand, 37229714 - 37229847
Alignment:
Q  129 ccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaa 227  Q
    |||||||||||| | |||||||||||||||  ||||||||| ||  |||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  37229714 ccaagaaatgtttacctagttcggtccaact-tgacctactatgagggagagattgatctctccaatccactataaatgagttcttacaaagagatataa 37229812  T
Q  228 aattagttacaagaaattagcttcaacaagctcac 262  Q
    ||   ||||||| ||||| |||| |||||||||||    
T  37229813 aaagggttacaacaaatttgctttaacaagctcac 37229847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 48143187 - 48143086
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||   ||||||||||||||||||||||||| |    
T  48143187 tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttatgaagagatacaaaa-gggttacaagaaattagcttcaacaagtt 48143089  T
Q  260 cac 262  Q
    |||    
T  48143088 cac 48143086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 5429837 - 5429722
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  | ||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||  ||||||||||||    
T  5429837 agttcggtccaact-taacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaatagatac-aaatgggttacaagaaat 5429740  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||||||||    
T  5429739 tagcttcaacaagctcac 5429722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 126 - 262
Target Start/End: Original strand, 6542169 - 6542304
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    ||||||||||||||| | | |||||||||||||  |||||||| |||| |||||||||||||||||||||||||||| || |||||||||||||||||||    
T  6542169 acaccaagaaatgtttacccagttcggtccaact-tgacctaccctgggggagagattgatctctccaatccactatcaacgagttcttacaaagagata 6542267  T
Q  225 caaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||    | |||||||||||| ||||||||||||||    
T  6542268 caaaa-ggctaacaagaaattagtttcaacaagctcac 6542304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 29999804 - 29999920
Alignment:
Q  135 aatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaatta 232  Q
    |||||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||  |    
T  29999804 aatgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaaaaagatacaaaa-ga 29999902  T
Q  233 gttacaagaaattagctt 250  Q
    ||||||||||||||||||    
T  29999903 gttacaagaaattagctt 29999920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 36463399 - 36463514
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||| | || |||||||||||||||||||| ||||  ||||||||||||    
T  36463399 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactgtcaaagagttcttacaaagagatac-aaatgggttacaagaaat 36463496  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||||||||    
T  36463497 tagcttcaacaagctcac 36463514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 37740783 - 37740668
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||| | ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  37740783 agttcggtccaact-tgaccaaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 37740686  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||| ||||    
T  37740685 tagcttcaacaagttcac 37740668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 46147401 - 46147516
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| |||||||||||| ||||||||||||||| || ||||||||||||||||||||||| | |||||||||||||    
T  46147401 agttcggtccaact-tgacctaatttgggggagagattgatgtctccaatccactatcaaagagttcttacaaagagatacaaa-tgagttacaagaaat 46147498  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||||||||    
T  46147499 tagcttcaacaagctcac 46147516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 13992293 - 13992402
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| ||||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||  ||||    
T  13992293 tgttcacctagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttac-aagagatacaaaa-gagtt 13992390  T
Q  236 acaagaaattag 247  Q
    ||||||||||||    
T  13992391 acaagaaattag 13992402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 47038421 - 47038535
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  |||| |||||||| |||||||||||||||||||||||||||| ||||||| |||||||| |||||||||  |  |||||||||||    
T  47038421 agttcggtccaact-tgacttactctgggggagagattgatctctccaatccactatcaatgagtccttacaaacagatacaaa--tgattacaagaaat 47038517  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||||||||    
T  47038518 tagcttcaacaagctcac 47038535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 5370092 - 5370196
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    ||||||||||||   ||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||   ||||||||||||    
T  5370092 agttcggtccaaacttgacctactctggaggagagattgatctctctagtccactatcaatgagttcttacaaagagatacaaaa-gggttacaagaaat 5370190  T
Q  245 tagctt 250  Q
    ||||||    
T  5370191 tagctt 5370196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 36994682 - 36994567
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||| ||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |  ||||||||||||    
T  36994682 agttcggtccaact-tgatctaatatgggggagagattgatctctccaatccactatcaatgagttcttacaaagggatacaaa-tgggttacaagaaat 36994585  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||||||||    
T  36994584 tagcttcaacaagctcac 36994567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 55085325 - 55085439
Alignment:
Q  20 acaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaag 119  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||| |||||| | |||||||||||       ||| |||||||    
T  55085325 acaagcaataacaacaatctagatctaatttagaaaccaagtgcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaaagaaaag 55085424  T
Q  120 ataacaacaccaaga 134  Q
    |||||||||||||||    
T  55085425 ataacaacaccaaga 55085439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 31495316 - 31495428
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||| ||||||||||||||  |||    
T  31495316 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatcaactatcaatgagttcttacaaaagagatacaaaaagagt 31495415  T
Q  235 tacaagaaattag 247  Q
    |||||||||||||    
T  31495416 tacaagaaattag 31495428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 34570440 - 34570539
Alignment:
Q  163 acctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctca 261  Q
    ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |  ||||||||||||||||||||||||| |||    
T  34570440 acctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aattgggttacaagaaattagcttcaacaagttca 34570538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 126 - 259
Target Start/End: Complemental strand, 4588137 - 4588005
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    |||||| |||||||| | | |||| ||||||||  | ||||| | ||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  4588137 acaccatgaaatgtttacccagtttggtccaact-tcacctattatgggggagagattgttctctccaatccactatcaatgagttcttacaaagagata 4588039  T
Q  225 caaaattagttacaagaaattagcttcaacaagct 259  Q
    |||||   |||||||||||||||||||||||||||    
T  4588038 caaaagg-gttacaagaaattagcttcaacaagct 4588005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 22882740 - 22882870
Alignment:
Q  125 aacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagttc-ttacaaagaga 222  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| |  || ||||||||| |||| |||||||||  ||||||||| |||| ||||||    
T  22882740 aacaccaagaaatgtttatccagttcggtccaacaatgacctactccg--ggggagattgatttctctaatccactaccaatgagttctttacgaagaga 22882837  T
Q  223 tacaaaattagttacaagaaattagcttcaacaa 256  Q
    |||||||   ||||||||||||||||||||||||    
T  22882838 tacaaaa-gggttacaagaaattagcttcaacaa 22882870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 22934404 - 22934534
Alignment:
Q  125 aacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagttc-ttacaaagaga 222  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| |  || ||||||||| |||| |||||||||  ||||||||| |||| ||||||    
T  22934404 aacaccaagaaatgtttatccagttcggtccaacaatgacctactccg--ggggagattgatttctctaatccactaccaatgagttctttacgaagaga 22934501  T
Q  223 tacaaaattagttacaagaaattagcttcaacaa 256  Q
    |||||||   ||||||||||||||||||||||||    
T  22934502 tacaaaa-gggttacaagaaattagcttcaacaa 22934534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 12743935 - 12744038
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  12743935 agttcggtccaact-tgacctaatatgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 12744032  T
Q  245 tagctt 250  Q
    ||||||    
T  12744033 tagctt 12744038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 12745324 - 12745427
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  12745324 agttcggtccaact-tgacctaatatgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 12745421  T
Q  245 tagctt 250  Q
    ||||||    
T  12745422 tagctt 12745427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 250
Target Start/End: Original strand, 52095352 - 52095475
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    ||||||| || |||||| | ||||||||||||   || ||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||    
T  52095352 acaccaaaaattgttcacccagttcggtccaaacttg-cctactctggaggagagattgatctctccaatccactatcaaagatttcttacaaagagata 52095450  T
Q  225 caaaattagttacaagaaattagctt 250  Q
    | ||||  ||||||||||||||||||    
T  52095451 c-aaatgggttacaagaaattagctt 52095475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 24969238 - 24969155
Alignment:
Q  179 agattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  24969238 agatttatctctccaatccactatcaattagttcttacaaagagatacaaa-tgagttacaagaaattagcttcaacaagctcac 24969155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 54199930 - 54200031
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||| ||||| ||||||| ||||||||| ||| |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| |    
T  54199930 tgacctaatctgggggagagaatgatctctctaattcactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagtt 54200028  T
Q  260 cac 262  Q
    |||    
T  54200029 cac 54200031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 12739560 - 12739663
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||| |||||| |||||| ||||  ||||||||||||    
T  12739560 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcatacaaatagatac-aaatgggttacaagaaat 12739657  T
Q  245 tagctt 250  Q
    ||||||    
T  12739658 tagctt 12739663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 45687192 - 45687307
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  |||| || | |||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||| ||||| |||||||    
T  45687192 agttcggtccaact-tgacataatatggaggagagatagatctctccaatccactatcaatgagttcttacaaatagatac-aaatgagttataagaaat 45687289  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||  ||||||||||    
T  45687290 tagctttgacaagctcac 45687307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 3913578 - 3913491
Alignment:
Q  175 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||  |||| ||||||||||||||||||| |||||    
T  3913578 ggagagattgatctctccaatccactatcaatgagttcttacaaagatatac-aaatgggttaaaagaaattagcttcaacaaactcac 3913491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 8393562 - 8393448
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 233  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  8393562 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 8393465  T
Q  234 ttacaagaaattagctt 250  Q
    |||||||||||||||||    
T  8393464 ttacaagaaattagctt 8393448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 8395771 - 8395657
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 233  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  8395771 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 8395674  T
Q  234 ttacaagaaattagctt 250  Q
    |||||||||||||||||    
T  8395673 ttacaagaaattagctt 8395657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 12744087 - 12744160
Alignment:
Q  177 agagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 250  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  12744087 agagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagctt 12744160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 52467364 - 52467479
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||| | |||||||||||||||||||||||||||| ||  |||| |||||||| ||||| ||||  ||||||||| ||    
T  52467364 agttcggtccaact-tgacctaatctcggggagagattgatctctccaatccactatcaaaaagttattacaaagtgatac-aaatgggttacaagatat 52467461  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||||||||    
T  52467462 tagcttcaacaagctcac 52467479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 29254652 - 29254538
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | |||  ||||||||||||||||||||||||||| || ||||||||||||||||| || ||||  ||| ||||||||    
T  29254652 agttcggtccaact-tgacctaatttgggagagagattgatctctccaatccactatcaacgagttcttacaaagagacac-aaatgggttgcaagaaat 29254555  T
Q  245 tagcttcaacaagctca 261  Q
    || ||||||||||||||    
T  29254554 taacttcaacaagctca 29254538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 12745476 - 12745546
Alignment:
Q  177 agagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattag 247  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||    
T  12745476 agagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattag 12745546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 46703853 - 46703752
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaa 98  Q
    ||||||||||||||| ||| ||||||| ||||||||| ||  || ||| |||| ||  ||||||||||| ||||||||||||||||||||||||||||||    
T  46703853 taaccaaatgtaaataacctcaagcaacaacaacaatatatagacctattctataat-caagtgcatagcaaaaccacaatctaaccaaaggataaacaa 46703755  T
Q  99 gat 101  Q
    |||    
T  46703754 gat 46703752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 5871964 - 5871863
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||| ||||| ||||||||||||||||| |||||||||| || |||||||| ||||| |||| |||||  ||||||||||||| |||| ||||||||    
T  5871964 tgacctaatctgggggagagattgatctctctaatccactatcaaagagttcttgcaaagtgata-aaaatgggttacaagaaatttgcttaaacaagct 5871866  T
Q  260 cac 262  Q
    |||    
T  5871865 cac 5871863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 12747794 - 12747869
Alignment:
Q  175 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 250  Q
    |||||||||||||||||||||||||||| ||||||||| |||||| |||||| ||||  ||||||||||||||||||    
T  12747794 ggagagattgatctctccaatccactatcaatgagttcatacaaatagatac-aaatgggttacaagaaattagctt 12747869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 13009468 - 13009536
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaa 228  Q
    ||||||| | |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||    
T  13009468 tgacctaatttggaggagagatcgatctctccaatccactatcaatgagttcttacaaagggatacaaa 13009536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 262
Target Start/End: Complemental strand, 21688437 - 21688292
Alignment:
Q  117 aagataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctta 214  Q
    ||||||||||||||||||||| ||| |   | ||||||| |||  ||||||| ||| | |||| |||||||||||||||| || ||| |||||||||||     
T  21688437 aagataacaacaccaagaaattgttgactcaattcggtctaact-tgacctaatctaggggagggattgatctctccaattcattatcaatgagttcttc 21688339  T
Q  215 caaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    | |||||||||||| | |||||||| ||||||| ||||||||||||||    
T  21688338 cgaagagatacaaa-tgagttacaaaaaattagtttcaacaagctcac 21688292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 259
Target Start/End: Original strand, 21703829 - 21703958
Alignment:
Q  130 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaa 227  Q
    ||||||||||| | | ||||||||| |||||||||||||| ||| ||| |||||||| ||||||||||||| | ||||||||| ||||||| ||||||||    
T  21703829 caagaaatgtttacccagttcggtcaaacaatgacctactatgg-ggatagattgatatctccaatccactgtcaatgagttctttacaaaaagatacaa 21703927  T
Q  228 aattagttacaagaaattagcttcaacaagct 259  Q
    ||   | |||||||||| | ||||||||||||    
T  21703928 aa-agggtacaagaaatcatcttcaacaagct 21703958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 260
Target Start/End: Complemental strand, 34112973 - 34112862
Alignment:
Q  148 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctt-acaaagagatacaaaattagttacaagaaatt 245  Q
    |||||||||||||||||||||| | | |||||||  |||||||||| | |||||| ||||||||||| |||||||||| |||||   |||||| ||||||    
T  34112973 ttcggtccaacaatgacctactataggggagaga--gatctctccacttcactatcaatgagttctttacaaagagatgcaaaagg-gttacatgaaatt 34112877  T
Q  246 agcttcaacaagctc 260  Q
    |||||||||||||||    
T  34112876 agcttcaacaagctc 34112862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 5207866 - 5207967
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    |||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||||| ||||| | ||   ||| ||| ||||||||||||||||| |    
T  5207866 tgacctactctgggagagagattgatctttccaatccactatcaatgagttcttacaaatagatatacaa-gggttgcaataaattagcttcaacaagtt 5207964  T
Q  260 cac 262  Q
    |||    
T  5207965 cac 5207967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 51337242 - 51337139
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    |||||| |||||||| | | |||||||||||||  ||||||| | ||  ||||||||||||||||| ||| |||||| |||||||||||| |||||||||    
T  51337242 acaccacgaaatgtttacccagttcggtccaact-tgacctaatgtgtgggagagattgatctctctaatacactatcaatgagttcttaaaaagagata 51337144  T
Q  225 caaaa 229  Q
    |||||    
T  51337143 caaaa 51337139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 38811162 - 38811235
Alignment:
Q  109 gtagagaaaagataacaacacc-aagaaatgttcatctagttcggtccaacaatgacctactctggaggagaga 181  Q
    |||||||||||| ||||||||| ||||| |||| | | |||||||||||||||||||||||||| | |||||||    
T  38811162 gtagagaaaagagaacaacaccgaagaattgtttacccagttcggtccaacaatgacctactcttggggagaga 38811235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 260
Target Start/End: Original strand, 44967818 - 44967952
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgag-ttcttacaaagagat 223  Q
    |||| |||||||||| | | || ||||||||||| |||| || ||||| ||||||||||||| ||| |||| ||| | || ||| || ||||||||||||    
T  44967818 acacaaagaaatgtttacccaggtcggtccaacagtgacttattctgggggagagattgatccctctaatctactctcaacgagttttttacaaagagat 44967917  T
Q  224 acaaaattagttacaagaaattagcttcaacaagctc 260  Q
    |||||  | ||||||||||||| |||||| |||||||    
T  44967918 acaaa--tggttacaagaaattggcttcagcaagctc 44967952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 7125046 - 7124992
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  7125046 tgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 7124992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 5136224 - 5136155
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  5136224 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 5136155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 5138449 - 5138380
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  5138449 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 5138380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 44570432 - 44570489
Alignment:
Q  203 aatgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaagctc 260  Q
    ||||||||||| |||||||||||||||| | ||||||||||||||| ||||||||||||    
T  44570432 aatgagttctttacaaagagatacaaaaat-gttacaagaaattagtttcaacaagctc 44570489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 260
Target Start/End: Complemental strand, 6677597 - 6677514
Alignment:
Q  178 gagattgatctctccaatccactat-aatgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaagctc 260  Q
    |||||||||||||| |||||| ||| || || ||||| ||||||| ||||||||   ||||||||||||||||||||||||||||    
T  6677597 gagattgatctctcaaatccattatcaaagacttctttacaaagatatacaaaagg-gttacaagaaattagcttcaacaagctc 6677514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 34788851 - 34788898
Alignment:
Q  212 ttacaaagagatacaaaattagttacaagaaattagcttcaacaagctc 260  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  34788851 ttacaaagagatacaaaag-agttacaagaaattaacttcaacaagctc 34788898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 6719842 - 6719771
Alignment:
Q  19 cacaagcaataacaaca-atctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaag 89  Q
    |||| |||| ||||||| ||||||||||| |||||||| |||||||| || |||||||||||  ||||||||    
T  6719842 cacaggcaaaaacaacagatctagatctaatctagaaaccaagtgcaaagcaaaaccacaataaaaccaaag 6719771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 7122827 - 7122773
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||| ||||||||||||||  ||||||||||||||||  |||||||||||    
T  7122827 tgacctactatggaggagagattgtactctccaatccactatcaaatgagttctt 7122773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 21688533 - 21688470
Alignment:
Q  17 accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatc 80  Q
    ||||||||||| ||||| ||| ||||||||||||| ||| ||| ||||||  ||||||||||||    
T  21688533 accacaagcaacaacaataatatagatctagtctataaatcaaatgcataacaaaaccacaatc 21688470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 32091719 - 32091645
Alignment:
Q  26 aataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagat 101  Q
    |||||||||||| |||||||| ||||| ||||||||| | || |||||||||||  ||| |||| |||||||||||    
T  32091719 aataacaacaatttagatctaatctagcaaacaagtgtaaag-aaaaccacaattgaactaaagaataaacaagat 32091645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 224
Target Start/End: Original strand, 35369440 - 35369534
Alignment:
Q  130 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagata 224  Q
    ||||||||||| | || ||| ||||||||||||||||||| ||  |||||||| || |||| |||| ||| || ||||||||| |||||||||||||    
T  35369440 caagaaatgtttaccttgtttggtccaacaatgacctactatg--ggagagatcgacctcttcaattcaccatcaatgagttctttacaaagagata 35369534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 55085442 - 55085490
Alignment:
Q  213 tacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||| |   |||||||||||||||||||||||||||||    
T  55085442 tacaaagagatacaaa-tggtttacaagaaattagcttcaacaagctcac 55085490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 32091570 - 32091527
Alignment:
Q  212 ttacaaagagatacaaaattagttacaagaaattagcttcaacaa 256  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||    
T  32091570 ttacaaagagatacaaaag-agttacaagaaattagtttcaacaa 32091527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 37754949 - 37755076
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgag-ttcttacaaagagat 223  Q
    |||| ||||||| || ||| ||||  ||| |||||| ||||||| ||| |||||||||||||||| ||| ||| ||| |||||| || ||| ||||||||    
T  37754949 acactaagaaatatttatccagtttagtctaacaattacctactatgggggagagattgatctcttcaaaccattatcaatgagttttttagaaagagat 37755048  T
Q  224 acaaaattagttacaagaaattagcttca 252  Q
    | ||||   |||||||||||||| |||||    
T  37755049 a-aaaaaaggttacaagaaattatcttca 37755076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 166; Significance: 7e-89; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 5 - 262
Target Start/End: Complemental strand, 47115472 - 47115214
Alignment:
Q  5 caaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnn 104  Q
    ||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||||||||||       
T  47115472 caaatgtaaataatcacaagcaataacaacaatctagatctaatctagaaaacaagtgcataacaaaaccacaatctaacaaaaggataaacaagataaa 47115373  T
Q  105 nnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-a 203  Q
        | |||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  47115372 aagagcagagaaaagataacaacatcaagaaatgttcacccagttcggtccaacaatgacctactctggagcagagattgatctctccaatccactatca 47115273  T
Q  204 atgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||| ||| |||||||||||||||||||  |||||||||||||||||| |||||||||||    
T  47115272 atgggtttttacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcac 47115214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 28242609 - 28242382
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatag-aaaaaccacaatctaaccaaaggataaacaag 99  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||||| | |||||| |||||| |||| ||||||||||||||||| ||| ||||||||||    
T  28242609 taaccaaatgtaaataacctcaagcaacaacaacaatctagatctaatttagaaaccaagtgaatagcaaaaaccacaatctaacaaaatgataaacaag 28242510  T
Q  100 atnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccac 199  Q
    ||       |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28242509 ataaagagagtagagaaaagataacaacaccaagaaatgttcacccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccac 28242410  T
Q  200 tataatgagttcttacaaagagatacaa 227  Q
    ||||||||||||||||||||||||||||    
T  28242409 tataatgagttcttacaaagagatacaa 28242382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 47255217 - 47255465
Alignment:
Q  17 accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngta---ga 113  Q
    |||| |||||| ||||| ||| |||| |||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||       |||   ||    
T  47255217 accataagcaacaacaataatatagacctagtctataaaccaagtgcatagcaaaaccacaatctaaccaaaggataaacaagataaagagagtaaaaga 47255316  T
Q  114 gaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttct 212  Q
     |||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  47255317 aaaaaaataacaacaccaagaaatgttcacccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactatcaatgagttct 47255416  T
Q  213 tacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  47255417 tacaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 47255465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 37032933 - 37033198
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||| ||||||||||||||||||||||    
T  37032933 taaccaaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaatcacactctaaccaaaggataaacaaga 37033032  T
Q  101 tnnnnnnngtagagaaa--agataacaacaccaaga-aatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatcc 197  Q
    |       |||||||||  ||| |||||||| || | | |||||| | ||||||||||||| |||||||||| ||||| ||||||| |||||||||||||    
T  37033033 taaagagagtagagaaaatagacaacaacacgaatagattgttcacccagttcggtccaaccatgacctactatggagaagagattaatctctccaatcc 37033132  T
Q  198 actat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||| ||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||||    
T  37033133 actatcaatgagttcttacaaagagatgcaaaatggattacaagaaattagcttcaacaagctcac 37033198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 29136551 - 29136290
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 100  Q
    ||||||||| ||| | ||||||||||||||||||||  |||| |||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  29136551 taaccaaatataactaaccacaagcaataacaacaaaatagacctagtctataaaccaagtgcatagcaaaaccacaatctaaccaaaggataaacaaga 29136452  T
Q  101 tnnnnnnngtagagaaaagata-acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccac 199  Q
    |       |||||||||| ||| ||| |||||||||||||||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  29136451 taaagagagtagagaaaa-atagacagcaccaagaaatgttcacctagttcggtccaaacttgacctactctggaggagagattgatctctccaatccac 29136353  T
Q  200 tat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
     || |||||||||||||||||| |||| ||||  ||| ||||||||||||||||||||||||||    
T  29136352 gatcaatgagttcttacaaagaaatac-aaatgggttccaagaaattagcttcaacaagctcac 29136290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 31925587 - 31925832
Alignment:
Q  17 accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataa-acaagatnnnnnnngtagaga 115  Q
    ||||||||||||||||| ||| |||| |||||||| ||| ||||||||||| |||||||||||| |||||||| |||| |||||||       ||| |||    
T  31925587 accacaagcaataacaataatatagacctagtctataaaccaagtgcatagcaaaaccacaatccaaccaaagaataatacaagataacgagagtaaaga 31925686  T
Q  116 aaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctta 214  Q
    ||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  31925687 aaaaataacaacaccaagaaatgttcacctagttcggtccaac-ttgacctactctagaggagagattgatctctccaatccactatcaatgagttctta 31925785  T
Q  215 caaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  31925786 caaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 31925832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 37168599 - 37168340
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 100  Q
    ||||||||||||||| ||| ||||||| ||||| | | |||| |||||||| ||  ||||||||||| |||||||||||| |||||| | ||||||||||    
T  37168599 taaccaaatgtaaataacctcaagcaacaacaata-tatagacctagtctataat-caagtgcatagcaaaaccacaatcaaaccaaggaataaacaaga 37168502  T
Q  101 tnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccact 200  Q
    |       ||| |||||||||||||||||||||||||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  37168501 taaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctggaggagagattgatctctccaatccact 37168403  T
Q  201 at-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    || ||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||    
T  37168402 atcaatgagttcttacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcac 37168340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 13548880 - 13549125
Alignment:
Q  17 accacaagcaataacaacaatctagatctagtctagaaaacaa-gtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagaga 115  Q
    ||||||||||| ||||| ||| |||| |||||||| ||| ||| |||||||| |||||||||||| |||||||| |||||||||||       ||| |||    
T  13548880 accacaagcaacaacaataatatagacctagtctataaaccaaagtgcatagcaaaaccacaatccaaccaaagaataaacaagataaagagagtaaaga 13548979  T
Q  116 aaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctta 214  Q
    ||||||||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13548980 aaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctggaggagagattgatctctccaatccactatcaatgagttctta 13549078  T
Q  215 caaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||| ||||  |||||| |||||||| || |||||||||||    
T  13549079 caaagagatac-aaatgggttacatgaaattaggtttaacaagctcac 13549125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 262
Target Start/End: Complemental strand, 11349000 - 11348741
Alignment:
Q  5 caaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaagga-taaacaagatnn 103  Q
    ||||||||||| ||||||||||||||||||||| |||| |||||||| ||| ||||||||||| |||||||||||| ||   ||||| ||||||||||      
T  11349000 caaatgtaaataaccacaagcaataacaacaatatagacctagtctataaaccaagtgcatagcaaaaccacaatccaaagcaaggaataaacaagataa 11348901  T
Q  104 nnnnng--tagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta 201  Q
         |  || |||||||||||||||| |||||||||||||   |||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  11348900 agagagagtaaagaaaagataacaacatcaagaaatgttcactcagttcggtccaact-tgacctactctggaggagagattgatctctccaatccacta 11348802  T
Q  202 t-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    | |||||||||||| |||||||||| ||||  ||||||||||||||||||||||||||||||    
T  11348801 tcaatgagttcttagaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 11348741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 262
Target Start/End: Original strand, 7482100 - 7482356
Alignment:
Q  7 aatgtaaattaccacaagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnn 104  Q
    ||||||||| ||| ||||||| ||||||||| ||  || |||||||| ||  ||||||||||| |||||||||||| |||||| | |||||||||||       
T  7482100 aatgtaaataacctcaagcaacaacaacaatatatagacctagtctataat-caagtgcatagcaaaaccacaatccaaccaaggaataaacaagataaa 7482198  T
Q  105 nnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-a 203  Q
        ||| ||||||||| |||| |||| |||||||||| |||||||||||||||  |||||||||||| |||||||||||||||||||||| |||||| |    
T  7482199 gagagtaaagaaaagatgacaataccatgaaatgttcacctagttcggtccaact-tgacctactctgaaggagagattgatctctccaattcactatca 7482297  T
Q  204 atgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||    
T  7482298 atgagttcttacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcac 7482356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 69 - 262
Target Start/End: Original strand, 13547022 - 13547214
Alignment:
Q  69 aaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctac 168  Q
    |||||||||||| |||||||| |||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||||||||  ||||||||    
T  13547022 aaaaccacaatccaaccaaagaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctac 13547120  T
Q  169 tctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||| ||||||||||||||||||    
T  13547121 tctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaaatagcttcaacaagctcac 13547214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 37876630 - 37876858
Alignment:
Q  1 taaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaag 99  Q
    ||||||||||||||| | |||||||||| ||||||| | |||| |||||||| ||| |||||||||||||||||||||||  ||||||| ||||||||||    
T  37876630 taaccaaatgtaaataaaccacaagcaaaaacaacactatagacctagtctataaaccaagtgcatagaaaaaccacaattcaaccaaatgataaacaag 37876729  T
Q  100 atnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccac 199  Q
    ||       ||| |||||||||||||||||||||||||||||| | |||||||| ||||  |||  ||||||||||||||||||||||||| ||||||||    
T  37876730 ataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggttcaac-ttgatgtactctggaggagagattgatctctgcaatccac 37876828  T
Q  200 tat-aatgagttcttacaaagagatacaaa 228  Q
    ||| |||||||| |||||||||||||||||    
T  37876829 tatcaatgagttattacaaagagatacaaa 37876858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 42297852 - 42298100
Alignment:
Q  17 accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaa 116  Q
    |||| |||||||||||| ||| || | | |||||| ||| ||||||||||| |||| ||||||| |||||||  |||||||||||       ||| ||||    
T  42297852 accataagcaataacaataatatataccaagtctataaaccaagtgcatagcaaaatcacaatccaaccaaataataaacaagataaaaga-gtaaagaa 42297950  T
Q  117 aa---gataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc 211  Q
    ||   || ||||||||||||| || ||||| | ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  42297951 aaatagacaacaacaccaagagattgttcacccagttcggtccaaccatgacctactctggaggagagattgatctcttcaatccactatcaatgagttc 42298050  T
Q  212 ttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  42298051 ttacaaagagatac-aaatgagttacaagaaattagcttcaacaagctcac 42298100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 28 - 260
Target Start/End: Complemental strand, 6808730 - 6808497
Alignment:
Q  28 taacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaac 127  Q
    ||||||||||||||||||  |||||||| |||||| | || |||| ||| ||| ||| |||| |||||||||||       ||||| || | | ||||||    
T  6808730 taacaacaatctagatctgatctagaaaccaagtgtaaagcaaaatcactatcaaactaaagcataaacaagataaagagagtagaaaacaaagaacaac 6808631  T
Q  128 accaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatac 225  Q
     ||||||||| || ||||||||||| |||||||| ||||||||||  | |||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  6808630 tccaagaaatatttatctagttcggaccaacaataacctactctgaggaagagattgatctctccaatccactataaatgagttctttacaaagagatac 6808531  T
Q  226 aaaattagttacaagaaattagcttcaacaagctc 260  Q
    ||||  ||||||||||| |||||||||||||||||    
T  6808530 aaaa-gagttacaagaagttagcttcaacaagctc 6808497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 61 - 262
Target Start/End: Complemental strand, 19754737 - 19754538
Alignment:
Q  61 tgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaa 160  Q
    ||||||| |||||||||||| ||| ||||||||||||||||       ||| ||||||||||||| |||||| || |||| | | | |||||||||||      
T  19754737 tgcatagcaaaaccacaatccaacaaaaggataaacaagataaagagagtaaagaaaagataaca-caccaaaaattgttgacccacttcggtccaact- 19754640  T
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||| ||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  19754639 tgacctaatctgagggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaa-tcggttacaagaaattagcttcaacaagct 19754541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 117 - 259
Target Start/End: Complemental strand, 193799 - 193657
Alignment:
Q  117 aagataac-aacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctta 214  Q
    |||||||| |||||||||||||||||| | |||||||||||||  |||| |||||||||| |||||||||||||||||||||||||| |||||||| |||    
T  193799 aagataacgaacaccaagaaatgttcacccagttcggtccaact-tgacatactctggagaagagattgatctctccaatccactatcaatgagttatta 193701  T
Q  215 caaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||    
T  193700 caaagagatac-aaatgagttacaagaaattagcttcaacaagct 193657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 137 - 262
Target Start/End: Original strand, 8550787 - 8550912
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||    
T  8550787 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgagtt 8550885  T
Q  236 acaagaaattagcttcaacaagctcac 262  Q
    ||||||||||||||| |||||||||||    
T  8550886 acaagaaattagcttaaacaagctcac 8550912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 34603737 - 34603619
Alignment:
Q  144 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 242  Q
    |||||||||||||||  |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||| |||||  ||||||||||    
T  34603737 ctagttcggtccaact-tgacctactctggaggagagattgatctcttcaatccaccatcaatgagttcttacaaagagataaaaaatgggttacaagaa 34603639  T
Q  243 attagcttcaacaagctcac 262  Q
    |||||||| |||||||||||    
T  34603638 attagcttaaacaagctcac 34603619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 55 - 260
Target Start/End: Complemental strand, 19752932 - 19752731
Alignment:
Q  55 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtc 154  Q
    ||||||||||||| |||||||||||| ||| ||||||||||||||||       ||| | |||||||||||   | ||  | |||| | |||||||||||    
T  19752932 aacaagtgcatagtaaaaccacaatccaacaaaaggataaacaagataaagagagtaaataaaagataaca---caaaagattgttgacctagttcggtc 19752836  T
Q  155 caacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 253  Q
    ||||  ||||||| | |||  |||||||||||||||||||||| |||| |||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  19752835 caact-tgacctaatatgggagagagattgatctctccaatcctctatcaatgagttcttacaaagagatacaaa-tcggttacaagaaattagcttcaa 19752738  T
Q  254 caagctc 260  Q
    |||||||    
T  19752737 caagctc 19752731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 122 - 262
Target Start/End: Complemental strand, 22079501 - 22079359
Alignment:
Q  122 aacaacaccaa-gaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaa 218  Q
    ||||||||||| |||||||| | | |||| |||||| |||||||||||| ||||||||| |||||||||||||||||| ||| ||||||||| |||||||    
T  22079501 aacaacaccaaagaaatgtttaccaagtttggtccagcaatgacctactttggaggagaaattgatctctccaatccaatatcaatgagttctttacaaa 22079402  T
Q  219 gagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||| | |||||||||||||||||| |||||||||||    
T  22079401 gagatacaaaa-tggttacaagaaattagctttaacaagctcac 22079359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 3189498 - 3189373
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||    
T  3189498 tgttcacccagttcggtccaaacttgacctactctggatgagagattgatctctccaatccactatcaatgagttcttacaaaaagatacaaaa-gagtt 3189400  T
Q  236 acaagaaattagcttcaacaagctcac 262  Q
    ||| |||||||||||||||||| ||||    
T  3189399 acaggaaattagcttcaacaagttcac 3189373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 3198315 - 3198190
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||    
T  3198315 tgttcacccagttcggtccaaacttgacctactctggatgagagattgatctctccaatccactatcaatgagttcttacaaaaagatacaaaa-gagtt 3198217  T
Q  236 acaagaaattagcttcaacaagctcac 262  Q
    ||| |||||||||||||||||| ||||    
T  3198216 acaggaaattagcttcaacaagttcac 3198190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 3207154 - 3207029
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||    
T  3207154 tgttcacccagttcggtccaaacttgacctactctggatgagagattgatctctccaatccactatcaatgagttcttacaaaaagatacaaaa-gagtt 3207056  T
Q  236 acaagaaattagcttcaacaagctcac 262  Q
    ||| |||||||||||||||||| ||||    
T  3207055 acaggaaattagcttcaacaagttcac 3207029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 46065062 - 46064961
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| | || ||||||||||||||||||||||| ||||    
T  46065062 tgacctactctgggggagagattgatctctccaatccactatgaatgagttcttacaaagagatac-acatgagttacaagaaattagcttcaacgagct 46064964  T
Q  260 cac 262  Q
    |||    
T  46064963 cac 46064961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 28220236 - 28220351
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  28220236 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 28220333  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||| ||||    
T  28220334 tagcttcaacaagttcac 28220351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 28265564 - 28265679
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||||    
T  28265564 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaaagagttcttacaaagagatac-aaatgggttacaagaaat 28265661  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||||||||    
T  28265662 tagcttcaacaagctcac 28265679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 49918510 - 49918393
Alignment:
Q  144 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 242  Q
    |||||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||    
T  49918510 ctagttcggtccaact-tgacctaatttgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaa 49918413  T
Q  243 attagcttcaacaagctcac 262  Q
    ||||||||||||||| ||||    
T  49918412 attagcttcaacaagttcac 49918393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 834177 - 834292
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||    
T  834177 agttcggtccaact-tgacctactctgggggagagatagatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaat 834274  T
Q  245 tagcttcaacaagctcac 262  Q
    |||||| |||||||||||    
T  834275 tagcttaaacaagctcac 834292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 3157023 - 3156908
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  3157023 agttcggtccaact-tgacctaatatgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 3156926  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||| ||||    
T  3156925 tagcttcaacaagttcac 3156908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 126 - 262
Target Start/End: Complemental strand, 15820485 - 15820350
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    ||||||| ||||||| | |||||||| ||||||  |||||||||||||| |||||||| |||||| |||| |||||| |||||||||||| |||||||||    
T  15820485 acaccaataaatgtttacctagttcgatccaact-tgacctactctggatgagagatttatctcttcaatgcactatcaatgagttcttaaaaagagata 15820387  T
Q  225 caaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||  | ||||||||||||||||||||||||||||||    
T  15820386 caaatgt-gttacaagaaattagcttcaacaagctcac 15820350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 31659396 - 31659281
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |  ||||||||||||    
T  31659396 agttcggtccaact-tgacctaatctgagggagagattgatctctccaatccactatcaataagttcttacaaagagatacaaa-tgggttacaagaaat 31659299  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||||||||    
T  31659298 tagcttcaacaagctcac 31659281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 28223431 - 28223541
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  28223431 agttcggtccaact-tgacctaatatgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 28223528  T
Q  245 tagcttcaacaag 257  Q
    |||||||||||||    
T  28223529 tagcttcaacaag 28223541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 250
Target Start/End: Complemental strand, 20762833 - 20762727
Alignment:
Q  144 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 242  Q
    ||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||   ||||||||||    
T  20762833 ctagttcggtccaaacttgacctactctgtaggagagattgatctctccaatccactatcaatgagttcttacgaagagatacaaaa-gggttacaagaa 20762735  T
Q  243 attagctt 250  Q
    ||||||||    
T  20762734 attagctt 20762727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 13316352 - 13316465
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||   |||    
T  13316352 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttccaaagagatacaaaa-gggtt 13316450  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  13316451 acaagaaattagctt 13316465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 259
Target Start/End: Original strand, 13659346 - 13659458
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||  || |||||||||    
T  13659346 agttcggtccaact-taacctactctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagata-taaatgggtaacaagaaat 13659443  T
Q  245 tagcttcaacaagct 259  Q
    |||||||||||||||    
T  13659444 tagcttcaacaagct 13659458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 44455304 - 44455203
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||| |||| |||||||||||||||| ||||||||| |    
T  44455304 tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaaaagatac-aaatgagttacaagaaattagtttcaacaagtt 44455206  T
Q  260 cac 262  Q
    |||    
T  44455205 cac 44455203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 1833666 - 1833574
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 253  Q
    ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  1833666 tgacctaatctggtggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttacaagaatttagcttcaa 1833574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 4552647 - 4552762
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||||||||  |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||    ||||||||||||    
T  4552647 agttcggtccaact-tgacctactctgagggagagattgatctctccaatccattatcaatgagttcttacaaagggatacaaaggg-gttacaagaaat 4552744  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||||||||    
T  4552745 tagcttcaacaagctcac 4552762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 45644364 - 45644479
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||| |||| ||||||||    
T  45644364 agttcggtccaact-tgacctaatctgggggagatattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttgcaagaaat 45644461  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||  ||||||||||    
T  45644462 tagctttgacaagctcac 45644479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 255
Target Start/End: Complemental strand, 5460081 - 5459956
Alignment:
Q  130 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaa 227  Q
    ||||||||||| | ||||||| | |||||||||| ||||||| || ||||||||||||||||||||| ||||| ||||||||| ||||||||| ||| ||    
T  5460081 caagaaatgtttacctagttcagcccaacaatgatctactctagatgagagattgatctctccaatctactatcaatgagttctttacaaagaaatataa 5459982  T
Q  228 aattagttacaagaaattagcttcaaca 255  Q
    |||  |||||||||||||||||||||||    
T  5459981 aat--gttacaagaaattagcttcaaca 5459956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 16455750 - 16455664
Alignment:
Q  176 gagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||||    
T  16455750 gagagattgatctctccaatccactatcaatgagttcttacacagagatacaaa-tgggttacaagaaattagcttcaacaagctcac 16455664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 50167183 - 50167300
Alignment:
Q  144 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 242  Q
    |||||||||||||||  ||| ||| ||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||  ||||||||||    
T  50167183 ctagttcggtccaact-tgagctaatctgggggagagattgatctctccaatccactatcaatgagtttttacaaagagatac-aaatgggttacaagaa 50167280  T
Q  243 attagcttcaacaagctcac 262  Q
    ||||||||  ||||||||||    
T  50167281 attagctttgacaagctcac 50167300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 51765565 - 51765450
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   || |||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||   ||    
T  51765565 tgttcacccagttcggtccaaacttgtcctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaaggggt 51765466  T
Q  235 tacaagaaattagctt 250  Q
    ||||||||||||||||    
T  51765465 tacaagaaattagctt 51765450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 37503565 - 37503679
Alignment:
Q  144 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 242  Q
    |||||||| ||||||  |||| || ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||     ||||||||||    
T  37503565 ctagttcgatccaact-tgacataatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaa----ggttacaagaa 37503659  T
Q  243 attagcttcaacaagctcac 262  Q
    ||||||||||||||| ||||    
T  37503660 attagcttcaacaagttcac 37503679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 137 - 262
Target Start/End: Original strand, 50169211 - 50169335
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||| ||| |||||||||||||  ||||||| ||| | |||||||||||||||| ||||||||||| ||||||| ||||||||||||||| |||| ||||    
T  50169211 tgttgatccagttcggtccaact-tgacctaatctaggggagagattgatctcttcaatccactatcaatgagtacttacaaagagatac-aaatgagtt 50169308  T
Q  236 acaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||  ||||||||||    
T  50169309 acaagaaattagctttgacaagctcac 50169335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 13137986 - 13138101
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||| | ||||||||||| | |||||||||| ||||| ||||||||||| |||| |||||||||||||||| |||| |  ||||||||||||    
T  13137986 agttcggtccaata-tgacctactctaggggagagattgctctcttcaatccactatcaatgtgttcttacaaagagatgcaaa-tgggttacaagaaat 13138083  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||||||||    
T  13138084 tagcttcaacaagctcac 13138101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 127 - 262
Target Start/End: Original strand, 23555257 - 23555390
Alignment:
Q  127 caccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatac 225  Q
    |||||||||||||| |   |||||| ||||||  ||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  23555257 caccaagaaatgtttactcagttcgatccaact-tgacctactatgg-ggagagattgaactctccaatccactatcaatgagttcttacaaagagatac 23555354  T
Q  226 aaaattagttacaagaaattagcttcaacaagctcac 262  Q
     |||| ||||| |||||||||| ||||||||| ||||    
T  23555355 -aaatgagttataagaaattagtttcaacaagttcac 23555390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 41361074 - 41360957
Alignment:
Q  144 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 242  Q
    |||||||||||||| | ||||||||| ||| ||||| ||||||||||  |||||||||| || ||||||||||||||||||||||| |  ||||||||||    
T  41361074 ctagttcggtccaata-tgacctactatgggggagatattgatctctttaatccactatcaacgagttcttacaaagagatacaaa-tgggttacaagaa 41360977  T
Q  243 attagcttcaacaagctcac 262  Q
    ||||| ||||||||||||||    
T  41360976 attagtttcaacaagctcac 41360957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 127 - 262
Target Start/End: Original strand, 37282682 - 37282817
Alignment:
Q  127 caccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagttc-ttacaaagagata 224  Q
    |||||| ||||||| ||||||||| |||||| | ||||||||||   |||||||||| ||||||||||||||||| |||||||||| ||||||||||||     
T  37282682 caccaaaaaatgtttatctagttcagtccaa-attgacctactccaaaggagagatttatctctccaatccactactaatgagttctttacaaagagatg 37282780  T
Q  225 caaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||   ||||| | ||||||||||||||||||||||    
T  37282781 caaaa-gggttaccataaattagcttcaacaagctcac 37282817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 137 - 262
Target Start/End: Original strand, 196908 - 197033
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggagg-agagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagt 234  Q
    |||| ||| |||||||||||||  ||||||| ||||| || ||||||  |||||||||||||||||| ||||||||||||||||| |||||||| | |||    
T  196908 tgttgatccagttcggtccaact-tgacctaatctggggggagagataaatctctccaatccactatcaatgagttcttacaaagggatacaaa-tgagt 197005  T
Q  235 tacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||| ||| |||||||||||    
T  197006 tacaagaaattaacttaaacaagctcac 197033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 40122204 - 40122323
Alignment:
Q  144 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat---aatgagttcttacaaagagatacaaaattagttacaag 240  Q
    |||||||||||||||  ||||||| | ||| ||||||||||||||||| ||||||||||   || |||||||||||||| ||||| |||| ||||| |||    
T  40122204 ctagttcggtccaact-tgacctaatatgggggagagattgatctctctaatccactatatcaaagagttcttacaaagtgatac-aaatgagttataag 40122301  T
Q  241 aaattagcttcaacaagctcac 262  Q
    |||||||||| |||||||||||    
T  40122302 aaattagcttaaacaagctcac 40122323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 201
Target Start/End: Complemental strand, 2926706 - 2926613
Alignment:
Q  109 gtagagaaaagataacaacaccaa-gaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta 201  Q
    |||||| ||| | ||||||||||| ||| |||| | |||||||||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  2926706 gtagagtaaaaagaacaacaccaaagaattgtttacctagttcggtgcaacaatgacctactctgcagaagagattgatctctccaatccacta 2926613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 10925356 - 10925266
Alignment:
Q  175 ggagagattgatctctccaatccactat-aatga---gttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||| ||||||||||||||| |||||    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  10925356 ggagagattgatttctccaatccactatcaatgaattcttcttacaaagagatac-aaatgagttacaagaaattagcttcaacaagctcac 10925266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 37559877 - 37559994
Alignment:
Q  146 agttcggtccaacaatgacctactct-ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaa 243  Q
    |||||||||||||  ||||||| ||| || ||||||||||||||||||||| |||||| || |||||||||||||||||||| ||||  |||||||||||    
T  37559877 agttcggtccaact-tgacctaatctagggggagagattgatctctccaattcactatcaacgagttcttacaaagagatac-aaatgggttacaagaaa 37559974  T
Q  244 ttagc-ttcaacaagctcac 262  Q
    ||||| ||||||||| ||||    
T  37559975 ttagctttcaacaagttcac 37559994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 126 - 262
Target Start/End: Original strand, 927966 - 928101
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    |||| |||||||||| | | ||||||||| |||  ||||||||  ||| | |||| ||| |||||| |||||||||| |||||||| ||||||||||||     
T  927966 acacaaagaaatgtttacccagttcggtctaact-tgacctaccttggggaagaggttggtctctctaatccactattaatgagtttttacaaagagatc 928064  T
Q  225 caaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||   ||||||||||||||||||||||||||||||    
T  928065 caaaagg-gttacaagaaattagcttcaacaagctcac 928101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 263
Target Start/End: Original strand, 2262965 - 2263101
Alignment:
Q  128 accaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatac 225  Q
    ||||||||||||| |   ||||||| ||||||||||||||| ||   ||| |||||||||||| ||||||||||| ||| ||||| ||||||| |||||     
T  2262965 accaagaaatgtttactcagttcggaccaacaatgacctaccctaagggaaagattgatctcttcaatccactatcaataagttctttacaaaaagatat 2263064  T
Q  226 aaaattagttacaagaaattagcttcaacaagctcacc 263  Q
    ||||   |||||||||||||| ||||||||||||||||    
T  2263065 aaaa-gggttacaagaaattatcttcaacaagctcacc 2263101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 3847131 - 3847246
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| | |||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||| || |    
T  3847131 agttcggtccaact-tgacctaatctggggaagagatggatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaaaaatt 3847228  T
Q  245 tagcttcaacaagctcac 262  Q
    |||||| ||||| |||||    
T  3847229 tagcttaaacaaactcac 3847246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 260
Target Start/End: Original strand, 12318468 - 12318646
Alignment:
Q  82 aaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagag 180  Q
    |||||||| |||||||||||       ||| |||||||| ||||||||||| |||| ||| | |||||||||||||| ||||| ||||| ||| ||||||    
T  12318468 aaccaaagaataaacaagataaagggagtaaagaaaagagaacaacaccaaaaaattgtttacctagttcggtccaataatgaactactatgggggagag 12318567  T
Q  181 attgatctctccaatccactat-aatgagttcttaca-aagagatacaaaattagttacaagaaattagcttcaacaagctc 260  Q
    |  ||||||||   | || ||| |||||||||||| | |||| |||||||| | ||||||||||||||||||||||||||||    
T  12318568 a--gatctctctgcttcagtatcaatgagttcttaaagaagacatacaaaa-tggttacaagaaattagcttcaacaagctc 12318646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 40282545 - 40282435
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  40282545 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 40282448  T
Q  235 tacaagaaattag 247  Q
    |||||||||||||    
T  40282447 tacaagaaattag 40282435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 257
Target Start/End: Original strand, 9109292 - 9109540
Alignment:
Q  12 aaattaccacaagcaataacaaca-atctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaa-gatnnnnnnng 109  Q
    |||| |||||||| |||||||||| |||||||||||  |||| || ||| ||   || | |||||||||| |||||||| |||||||| |||       |    
T  9109292 aaataaccacaagtaataacaacagatctagatctaagctagcaaccaactgtgaagcataaccacaatcaaaccaaagaataaacaaagataaagagag 9109391  T
Q  110 tagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgag 208  Q
    ||||||  | |||||| | |||| ||||||| | |||||| ||| |||| ||||| ||||||   | ||||||||||||||||||| |||||| || | |    
T  9109392 tagagactaaataacagccccaaaaaatgtttacctagtttggttcaacgatgacttactctatggaagagattgatctctccaatacactatcaacgtg 9109491  T
Q  209 ttc-ttacaaagagatacaaaattagttacaagaaattagcttcaacaag 257  Q
    ||| ||||||||||||||||||   |||||||||||||| ||||||||||    
T  9109492 ttctttacaaagagatacaaaa-gggttacaagaaattaacttcaacaag 9109540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 246
Target Start/End: Complemental strand, 13938288 - 13938195
Alignment:
Q  154 ccaacaatgacctac-tctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaaaattagttacaagaaatta 246  Q
    ||||||||||||||| ||||| |||||||  ||||||||||||||||||| |||||||| |||||||||||||||||||   ||||||||||||||    
T  13938288 ccaacaatgacctacatctgggggagaga--gatctctccaatccactatcaatgagtttcttacaaagagatacaaaaaaggttacaagaaatta 13938195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 218
Target Start/End: Complemental strand, 9987369 - 9987287
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 218  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| ||||||||||| ||||    
T  9987369 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaatgagttcttgcaaa 9987287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 20622237 - 20622319
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 218  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| || |||||||||||||    
T  20622237 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaagagttcttacaaa 20622319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 30476486 - 30476566
Alignment:
Q  177 agagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaag 257  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||||  ||||||| |||||| ||||||||||    
T  30476486 agagattgatctgtccaatccagtatcaatgagttcttacaaagagatac-aaatgggttacaataaattatcttcaacaag 30476566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 9036584 - 9036471
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||| ||||||||||||  |||| ||||||||||| || |||||||||| |||| |||||||||   ||    
T  9036584 tgttcacccagttcggtccaaacttgacctactctcgaggagagattgtactcttcaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 9036487  T
Q  235 tacaagaaattagctt 250  Q
    ||||||||||||||||    
T  9036486 tacaagaaattagctt 9036471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 44203800 - 44203722
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  44203800 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 44203722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 36683824 - 36683766
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 218  Q
    ||||||||||||| |||||||||||| ||| ||||||||||| ||||||||||||||||    
T  36683824 tgacctactctgggggagagattgatttctacaatccactatcaatgagttcttacaaa 36683766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 21054117 - 21054044
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 218  Q
    ||||||||||||   |||||||||||||||||||| |||  |||||||||||||||| || |||||||||||||    
T  21054117 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaagagttcttacaaa 21054044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 34603810 - 34603737
Alignment:
Q  57 caagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacacc 130  Q
    ||||||||||| |||||||||||| |||||| | |||||||||||       ||| ||||||||||||||||||    
T  34603810 caagtgcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaaagaaaagataacaacacc 34603737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 3460821 - 3460739
Alignment:
Q  181 attgatctctccaatccactat-aatgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||| ||||| |||  |||||| ||||||| ||||||||   ||||||| ||||||||||||||||||||||    
T  3460821 attgatctctccaatcgactatcaatatgttctttacaaagatatacaaaagg-gttacaataaattagcttcaacaagctcac 3460739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 8871089 - 8871127
Alignment:
Q  164 cctactctggaggagagattgatctctccaatccactat 202  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  8871089 cctactatgggggagagattgatctctccaatccactat 8871127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 262
Target Start/End: Original strand, 37879007 - 37879036
Alignment:
Q  233 gttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||||||||||||||||||||||    
T  37879007 gttacaagaaattagcttcaacaagctcac 37879036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 262
Target Start/End: Original strand, 44650153 - 44650288
Alignment:
Q  127 caccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagtt-cttacaaagagata 224  Q
    |||||| |||| || | |||||||||||||| | ||||||||| | | | |||||||||||||| |||||||||| |||||| ||  |||||||||||||    
T  44650153 caccaaaaaatatttacctagttcggtccaa-attgacctacttttgggaagagattgatctcttcaatccactattaatgaattatttacaaagagata 44650251  T
Q  225 caaaattagttacaagaaattagcttcaacaagctcac 262  Q
     ||||  | |||||| |||||||| | ||||| |||||    
T  44650252 taaaa-gatttacaataaattagcgttaacaaactcac 44650288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 1050520 - 1050567
Alignment:
Q  212 ttacaaagagatacaaaattagttacaagaaattagcttcaacaagctc 260  Q
    ||||||||||| |||||| | ||||||||||||||||||||| ||||||    
T  1050520 ttacaaagagacacaaaaat-gttacaagaaattagcttcaataagctc 1050567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 25652178 - 25652135
Alignment:
Q  212 ttacaaagagatacaaaattagttacaagaaattagcttcaacaa 256  Q
    |||||||||||||||| |  |||||||||||||||||||||||||    
T  25652178 ttacaaagagatacaagag-agttacaagaaattagcttcaacaa 25652135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 165; Significance: 3e-88; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 2 - 262
Target Start/End: Complemental strand, 40329078 - 40328822
Alignment:
Q  2 aaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagat 101  Q
    |||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  40329078 aaccaaatgtaaataaccacaagcaataacaacagtctagatctaatctagaaaacaagtgcatagcaaaaccacaatctaaccaaaggataaacaagaa 40328979  T
Q  102 nnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta 201  Q
           ||||||||||||||||||||||||||||||||||   ||||| ||||||     |||||||||||||||||||||||||||||||||||||||    
T  40328978 aaggagagtagagaaaagataacaacaccaagaaatgttcactcagttccgtccaa-----acctactctggaggagagattgatctctccaatccacta 40328884  T
Q  202 t-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    | |||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||    
T  40328883 tcaatgagttcttacaaagagatacaaaatgagttacaagaaattagtttaaacaagctcac 40328822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 11384288 - 11384028
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11384288 taaccaaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaaccacaatctaaccaaaggataaacaaga 11384189  T
Q  101 tnnnnnnngtagagaaaagata-acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccac 199  Q
    |       ||| |||||| ||| |||||||||| ||||||||| | |||||||||||||  | |||||||||||||||||||| ||| |||||||||||     
T  11384188 taaagagagtaaagaaaa-atagacaacaccaaaaaatgttcacccagttcggtccaac-ttaacctactctggaggagagatcgatgtctccaatccag 11384091  T
Q  200 tat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||| |||| |||||||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  11384090 tatcaatgggttcttacaaagagatac-aaatgagttacaagaaattagcttcaacaaactcac 11384028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 4283811 - 4283567
Alignment:
Q  17 accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaa 116  Q
    ||||||||||||||||||||| |||| |||||||| ||| ||||||||||| |||||||||||  ||||||||||||||||||||       ||| ||||    
T  4283811 accacaagcaataacaacaatatagacctagtctataaaccaagtgcatagcaaaaccacaattcaaccaaaggataaacaagataaagagagtaaagaa 4283712  T
Q  117 aagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac 215  Q
    |||||||||||||||||||||||||| | |||||||||||||  ||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||    
T  4283711 aagataacaacaccaagaaatgttcacccagttcggtccaac-ttgacctactctagaggggagattgatctctccaatccactatcaatgagttcttac 4283613  T
Q  216 aaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||    
T  4283612 aaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 4283567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 18655706 - 18655443
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaagga-taaacaag 99  Q
    ||||||||||||||| | ||||||||||||||||||| ||||||||||||| ||| ||||||||||| |||||||||||| ||   ||||| ||||||||    
T  18655706 taaccaaatgtaaataaacacaagcaataacaacaatatagatctagtctataaaccaagtgcatagcaaaaccacaatccaaagcaaggaataaacaag 18655607  T
Q  100 atnnnnnnng--tagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatcc 197  Q
    ||       |  || |||||||||||||||||||| ||||||||| | |||||||||||||  ||||||||| ||||||||||||||||||||| |||||    
T  18655606 ataaagagagagtaaagaaaagataacaacaccaaaaaatgttcacccagttcggtccaact-tgacctactttggaggagagattgatctctctaatcc 18655508  T
Q  198 actat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  18655507 actatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 18655443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 3 - 262
Target Start/End: Complemental strand, 3772493 - 3772235
Alignment:
Q  3 accaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatn 102  Q
    |||||| | |||| ||||||||||| ||||||||||||||| || |||||||| ||||||||||| ||||||||||||||||||||| |||||||||||     
T  3772493 accaaaagaaaataaccacaagcaacaacaacaatctagatttaatctagaaatcaagtgcatagcaaaaccacaatctaaccaaagaataaacaagata 3772394  T
Q  103 nnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat 202  Q
          ||||||||||||||||| ||||||||||| || ||| |||| ||||||||  ||||||||||||   || ||||||||||||||||||||||||    
T  3772393 aagagagtagagaaaagataacaccaccaagaaatatttatccagtttggtccaac-ttgacctactctgagagatagattgatctctccaatccactat 3772295  T
Q  203 -aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
     ||| | |||||||||||| |||| |||| ||||||||||||||||||| || ||||||||    
T  3772294 caataaattcttacaaagatatac-aaatgagttacaagaaattagcttaaataagctcac 3772235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 42434870 - 42435116
Alignment:
Q  17 accacaagcaataacaacaatc--tagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaagga-taaacaagatnnnnnnngtaga 113  Q
    ||||||||||| |||||||||   |||| |||||||| ||  ||||||||||| |||||||||||| ||   ||||| ||||||||||       ||| |    
T  42434870 accacaagcaacaacaacaatagatagacctagtctataat-caagtgcatagcaaaaccacaatccaaagcaaggaataaacaagataaagaaagtaaa 42434968  T
Q  114 gaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttct 212  Q
    ||||||||||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  42434969 gaaaagataacaacaccaagaaatgttcacccagttcggtccaac-ttgacctactctggaggagagattgatttctccaatccactatcaatgagttct 42435067  T
Q  213 tacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  42435068 tacaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 42435116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 55 - 262
Target Start/End: Complemental strand, 40221994 - 40221788
Alignment:
Q  55 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtc 154  Q
    ||||||||||||| |||||||||||| |||||||| || ||||||||       ||| ||| ||||||||||||||||  | | || | | |||||||||    
T  40221994 aacaagtgcatagcaaaaccacaatccaaccaaagaatgaacaagataaagagagtaaagacaagataacaacaccaaagattattgacccagttcggtc 40221895  T
Q  155 caacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 253  Q
    ||||  ||||||| ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||||||| |||||    
T  40221894 caact-tgacctaatctgggggagagattgatctctccaatccactatcaacgagttcttacaaagagatac-aaatgggttacaagaaattagtttcaa 40221797  T
Q  254 caagctcac 262  Q
    |||||||||    
T  40221796 caagctcac 40221788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 55 - 262
Target Start/End: Original strand, 10930116 - 10930324
Alignment:
Q  55 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtaga-gaaaagataacaacaccaagaaat-gttcatctagttcgg 152  Q
    ||||||||||||| |||||||||||| ||| |||| |||||||||||       | | | |||||||||||||||||||||||| ||| | | |||||||    
T  10930116 aacaagtgcatagcaaaaccacaatccaacaaaagaataaacaagataaagggagcaaaagaaaagataacaacaccaagaaattgttgacccagttcgg 10930215  T
Q  153 tccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttc 251  Q
    ||||||  ||||||| ||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||  ||||  |||||||||||||||||||    
T  10930216 tccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgtgttcttacaaagagata-taaatgggttacaagaaattagcttc 10930313  T
Q  252 aacaagctcac 262  Q
    ||| |||||||    
T  10930314 aacgagctcac 10930324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 42498362 - 42498237
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||   |||    
T  42498362 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagaaatacaaaa-gggtt 42498264  T
Q  236 acaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||| ||||    
T  42498263 acaagaaattagcttcaacaagttcac 42498237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 262
Target Start/End: Original strand, 1292454 - 1292588
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    |||||||||||||||   | |||||||||||||  ||||||||||||| ||||||||| || |||| |||||||||| ||||||||||||||||||||||    
T  1292454 acaccaagaaatgtttgcccagttcggtccaact-tgacctactctgg-ggagagatttatttctcaaatccactatcaatgagttcttacaaagagata 1292551  T
Q  225 caaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||| | |||||||||||||||||||||||||||||||    
T  1292552 caaa-tgagttacaagaaattagcttcaacaagctcac 1292588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 30143476 - 30143383
Alignment:
Q  169 tctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  30143476 tctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaa-tgggttacaagaaattagcttcaacaagctcac 30143383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 3303680 - 3303795
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||||| ||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| |||||||||||||    
T  3303680 agttcggtccaact-tgacctactgtgggggagagattgatctcttcaatccactatcaatgagttcttacaaagagatac-aaatgagttacaagaaat 3303777  T
Q  245 tagcttcaacaagctcac 262  Q
    ||| || |||||||||||    
T  3303778 taggttaaacaagctcac 3303795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 15212944 - 15212829
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  15212944 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccattatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 15212847  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||| ||||    
T  15212846 tagcttcaacaagttcac 15212829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 27811436 - 27811321
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| |  ||||||||||||    
T  27811436 agttcggtccaact-tgacctaatctgggggagagattgatctcttcaatccactatcaatgggttcttacaaagagatacaaa-tgggttacaagaaat 27811339  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||||||||    
T  27811338 tagcttcaacaagctcac 27811321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 33352308 - 33352193
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  33352308 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 33352211  T
Q  245 tagcttcaacaagctcac 262  Q
    ||| ||||||||| ||||    
T  33352210 taggttcaacaagttcac 33352193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 43036581 - 43036466
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| | |||||||||||    
T  43036581 agttcggtccaact-tgacctaatctggaggagagattgatctctcaaatccactatcaatgagttcttacaaagagatac-aaatgaattacaagaaat 43036484  T
Q  245 tagcttcaacaagctcac 262  Q
    ||| ||||||||| ||||    
T  43036483 tagtttcaacaagttcac 43036466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 250
Target Start/End: Original strand, 19945383 - 19945473
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 250  Q
    ||||||||||| ||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||||||||||    
T  19945383 tgacctactctcgaggagagattgaactctccaatccactatcaatgagttcttccaaagagatacaaaagtggttacaagaaattagctt 19945473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 34256507 - 34256616
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  34256507 tgttcacccagttcggtccaaacttgacctactctagaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 34256605  T
Q  236 acaagaaatta 246  Q
    |||||||||||    
T  34256606 acaagaaatta 34256616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 44304023 - 44303910
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| |||||||| |||||   ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||  | ||    
T  44304023 tgttcacctagttcgatccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttaaaaagagatacaaaagga-tt 44303925  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  44303924 acaagaaattagctt 44303910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 5689429 - 5689314
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||| | ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  5689429 agttcggtccaact-tgaccaaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 5689332  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||  ||||||||||    
T  5689331 tagctttgacaagctcac 5689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 146 - 260
Target Start/End: Complemental strand, 7597774 - 7597659
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaa 243  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||  | ||| ||||||    
T  7597774 agttcggtctaacaatgacctactatgggggagagattgatctctccaatccactatcaatgcattctttacaaagagatacaaaagga-ttataagaaa 7597676  T
Q  244 ttagcttcaacaagctc 260  Q
    |||||||||||||||||    
T  7597675 ttagcttcaacaagctc 7597659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 2627895 - 2627792
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttaca-aagagatacaaaattagttacaagaaa 243  Q
    ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||  |||| |||||||    
T  2627895 agttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacacaagagatacaaaaagagttgcaagaaa 2627796  T
Q  244 ttag 247  Q
    ||||    
T  2627795 ttag 2627792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 148 - 262
Target Start/End: Complemental strand, 4731814 - 4731701
Alignment:
Q  148 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaatta 246  Q
    |||||||||||  ||||| | ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||    
T  4731814 ttcggtccaact-tgaccgaatctgggggagagatcgatctctccaatccactatcaatgagttcttacaaagagatacaaa-tgggttacaagaaatta 4731717  T
Q  247 gcttcaacaagctcac 262  Q
    | ||||||||||||||    
T  4731716 ggttcaacaagctcac 4731701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 148 - 257
Target Start/End: Complemental strand, 4162652 - 4162545
Alignment:
Q  148 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaatta 246  Q
    |||||||||||  ||||||||||| | |||||||||||| |||||||||| |||| |||||||||||||||||||||||||| | |||||||||||||||    
T  4162652 ttcggtccaact-tgacctactcttggggagagattgatatctccaatcc-ctatcaatgagttcttacaaagagatacaaa-tgagttacaagaaatta 4162556  T
Q  247 gcttcaacaag 257  Q
    |||||||||||    
T  4162555 gcttcaacaag 4162545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 17982821 - 17982712
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||   |||    
T  17982821 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttccaaagagatacaaaa-gggtt 17982723  T
Q  236 acaagaaatta 246  Q
    |||||||||||    
T  17982722 acaagaaatta 17982712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 18141964 - 18141863
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||| ||| | |||||||||||||||||||||||||||| || |||||||||||||| |||||||| |  |||||||||||||||||||||||||||    
T  18141964 tgacctaatctaggggagagattgatctctccaatccactatcaaagagttcttacaaagtgatacaaa-tgggttacaagaaattagcttcaacaagct 18141866  T
Q  260 cac 262  Q
    |||    
T  18141865 cac 18141863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 31218425 - 31218312
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| ||||| |||||||||| ||||||||||| |||||||||||||||   |||    
T  31218425 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctctaatccactatcaatgagttcttccaaagagatacaaaa-gggtt 31218327  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  31218326 acaagaaattagctt 31218312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 34254331 - 34254440
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||   |||    
T  34254331 tgttcacccagttcggtccaaacttgacctactctagaggagagattgatctctccaatccactatcaataagttcttacaaagagatacaaaa-gggtt 34254429  T
Q  236 acaagaaatta 246  Q
    |||||||||||    
T  34254430 acaagaaatta 34254440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 258
Target Start/End: Complemental strand, 10015257 - 10015128
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    ||||||||||||| | | | |||||||||||||  ||||||||| ||||| ||||||| |||||||||||||||||| ||||||||| || |||||||||    
T  10015257 acaccaagaaatgattacccagttcggtccaact-tgacctactatggag-agagatttatctctccaatccactatcaatgagttccta-aaagagata 10015161  T
Q  225 caaaattagttacaagaaattagcttcaacaagc 258  Q
    |||| | |||||||||||||||||||||||||||    
T  10015160 caaa-tgagttacaagaaattagcttcaacaagc 10015128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 12702644 - 12702759
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||| | |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||   ||||||||||||    
T  12702644 agttcggtccaact-tgacctaatctaggggagagattgatctctccaatccaatatcaatgagttcttacaaagagacacaaaa-gggttacaagaaat 12702741  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||| ||||    
T  12702742 tagcttcaacaagttcac 12702759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 40321238 - 40321123
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| || ||||| ||||||||||||||  |||  ||||||||||||    
T  40321238 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaaagagtttttacaaagagatac-taatgggttacaagaaat 40321141  T
Q  245 tagcttcaacaagctcac 262  Q
    || |||||||||||||||    
T  40321140 taacttcaacaagctcac 40321123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 30291737 - 30291650
Alignment:
Q  175 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||||||||| || || ||||||||||| |||||||| | |||||||||||||||||||||||||||||||    
T  30291737 ggagagattgatctctccaatccactatcaaagaattcttacaaagtgatacaaa-tgagttacaagaaattagcttcaacaagctcac 30291650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 19491707 - 19491824
Alignment:
Q  144 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 242  Q
    |||||||||||||| | ||||||||| ||| ||||| ||||||||||  |||||||||| || ||||||||||||||||||||||| |  ||||||||||    
T  19491707 ctagttcggtccaata-tgacctactatgggggagatattgatctctttaatccactatcaacgagttcttacaaagagatacaaa-tgggttacaagaa 19491804  T
Q  243 attagcttcaacaagctcac 262  Q
    ||||| ||||||||||||||    
T  19491805 attagtttcaacaagctcac 19491824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 1746219 - 1746331
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||| ||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||   |||    
T  1746219 tgttcacccagttcggtccaaacttgacctactatggaggagagattgaactctccaatccactatcaatgagttctt-caaagagatacaaaa-gggtt 1746316  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  1746317 acaagaaattagctt 1746331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 3439671 - 3439558
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||||| ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  3439671 tgttcatccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 3439574  T
Q  235 tacaagaaattagctt 250  Q
    ||||||||||||||||    
T  3439573 tacaagaaattagctt 3439558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 44353923 - 44353836
Alignment:
Q  175 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||| | ||||||||||| ||||||||||||||||||||||||||  | ||||||||||||||||||||||||| ||||    
T  44353923 ggagagattgatcttttcaatccactatcaatgagttcttacaaagagatacaaatgt-gttacaagaaattagcttcaacaagttcac 44353836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 1345379 - 1345496
Alignment:
Q  144 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 242  Q
    ||||||||||| |||  ||||||||||||| ||||||||||| |||| ||||||||||| ||||||||||| ||||||||||| | ||  ||||||||||    
T  1345379 ctagttcggtctaact-tgacctactctgggggagagattgaactcttcaatccactatcaatgagttctttcaaagagatac-atatgggttacaagaa 1345476  T
Q  243 attagcttcaacaagctcac 262  Q
    ||||||||||| || |||||    
T  1345477 attagcttcaataaactcac 1345496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 8153936 - 8153807
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    ||||||| |||| || ||| | |||||||||||  ||||||||||||  | |||||||||||||||||||| ||||| |||||||||||||||||| |||    
T  8153936 acaccaaaaaatatttatccatttcggtccaact-tgacctactctgaggaagagattgatctctccaatcaactatcaatgagttcttacaaagatata 8153838  T
Q  225 caaaattagttacaagaaattagcttcaacaa 256  Q
    |||||  ||||||| ||| |||||||||||||    
T  8153837 caaaa-gagttacacgaatttagcttcaacaa 8153807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 146 - 260
Target Start/End: Original strand, 18106091 - 18106201
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||| | ||||| |||||||||||||||| ||||||||| | |||||||||||||    
T  18106091 agttcggtccaact-tgacctattctgg-ggagagattgatctctccaaac-actatcaatgagttcttacaaa-agatacaaa-tgagttacaagaaat 18106185  T
Q  245 tagcttcaacaagctc 260  Q
    ||||||||||||||||    
T  18106186 tagcttcaacaagctc 18106201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 29796329 - 29796442
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgag--ttcttacaaagagatacaaaattagttacaagaa 242  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||||||||| ||| ||||||  || ||||||| || ||||||| | ||||||||||    
T  29796329 agttcggtccaacaatgacctacattgggggagagattgatctctccaatccattataaatgagtttttttacaaataggtacaaaaat-gttacaagaa 29796427  T
Q  243 attagcttcaacaag 257  Q
    || ||||||||||||    
T  29796428 atcagcttcaacaag 29796442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 32902191 - 32902292
Alignment:
Q  155 caacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaattagcttca 252  Q
    |||||||||||||||| || ||||||||||||||||| ||| |||||| ||||| ||| ||| ||||||||||||||  |||||||||||||||||||||    
T  32902191 caacaatgacctactcagggggagagattgatctctcaaattcactatcaatgaattctttagaaagagatacaaaa-aagttacaagaaattagcttca 32902289  T
Q  253 aca 255  Q
    |||    
T  32902290 aca 32902292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 259
Target Start/End: Original strand, 41366625 - 41366736
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  |||| |||||||    
T  41366625 agttcggtccaact-tgacctaatctag-ggagagattgatctctccaatccactataaatgagttcttacaaagggatac-aaataggttaaaagaaat 41366721  T
Q  245 tagcttcaacaagct 259  Q
    |||||| ||||||||    
T  41366722 tagcttaaacaagct 41366736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 130 - 260
Target Start/End: Original strand, 11711993 - 11712124
Alignment:
Q  130 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaa 227  Q
    ||||||||||| | | | || || |||||||||||||||| ||  |||||||||||||||| ||||||||||| ||||||||  ||||||||||||| ||    
T  11711993 caagaaatgtttacccaattaggaccaacaatgacctactttgagggagagattgatctcttcaatccactatcaatgagttatttacaaagagatataa 11712092  T
Q  228 aattagttacaagaaattagcttcaacaagctc 260  Q
    ||   ||| ||||||||||||||||||||||||    
T  11712093 aa-gggtttcaagaaattagcttcaacaagctc 11712124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 260
Target Start/End: Complemental strand, 6599130 - 6599017
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| ||||||||||||||||| |||||||||| ||||||||||||||||   |||| ||||  ||||||||||||    
T  6599130 agttcggtccaact-tgacctaatatgggggagagattgatctctctaatccactatcaatgagttcttacaaaagtatac-aaatgggttacaagaaat 6599033  T
Q  245 tagcttcaacaagctc 260  Q
    |||||| |||||||||    
T  6599032 tagcttaaacaagctc 6599017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 260
Target Start/End: Complemental strand, 6674583 - 6674470
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| ||||||||||||||||| |||||||||| ||||||||||||||||   |||| ||||  ||||||||||||    
T  6674583 agttcggtccaact-tgacctaatatgggggagagattgatctctctaatccactatcaatgagttcttacaaaagtatac-aaatgggttacaagaaat 6674486  T
Q  245 tagcttcaacaagctc 260  Q
    |||||| |||||||||    
T  6674485 tagcttaaacaagctc 6674470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 3073870 - 3073981
Alignment:
Q  132 agaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaat 230  Q
    ||||||||| | | ||||||| |||||  ||||||||| ||| |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||     
T  3073870 agaaatgtttacccagttcggcccaact-tgacctactatgg-ggagagattgatctctccaagccattatcaatgagttcttacaaagagatacaaaaa 3073967  T
Q  231 tagttacaagaaatt 245  Q
    | |||||||||||||    
T  3073968 t-gttacaagaaatt 3073981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 4733864 - 4733784
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagataca 226  Q
    |||||||||||||  ||||||| ||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  4733864 agttcggtccaact-tgacctaatctgggggagagatcgatctctccaatccactatcaatgaattcttacaaagagataca 4733784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 4743224 - 4743296
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 218  Q
    |||||||||||||  ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  4743224 agttcggtccaact-tgacctactttgggggagagattgatctctccaatccactatcaatgagttcttacaaa 4743296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 25690122 - 25690009
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  25690122 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 25690025  T
Q  235 tacaagaaattagctt 250  Q
    ||||||||||||||||    
T  25690024 tacaagaaattagctt 25690009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 10240411 - 10240263
Alignment:
Q  18 ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaacc-aaaggataaacaagatnnnnnnngtagagaa 116  Q
    |||||| |||||||||||||||||||||| ||||||||  || || | || |||||||||||| |||| |||  |||||||||||       ||  ||||    
T  10240411 ccacaaacaataacaacaatctagatctaatctagaaacgaaatgtaaagcaaaaccacaatcgaaccaaaaaaataaacaagataaagagagtgaagaa 10240312  T
Q  117 aagataacaacaccaagaaatgttcatctagttcggtccaacaatgacc 165  Q
    |||| ||||| ||||||||||||| | |||||| | |||||||||||||    
T  10240311 aagagaacaaaaccaagaaatgtttacctagtttgatccaacaatgacc 10240263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 2999723 - 2999806
Alignment:
Q  57 caagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgtt 140  Q
    ||||||||||| |||| |||||||||||||||| |||||||||||       |||||||||||||| ||||| |||||||||||    
T  2999723 caagtgcatagcaaaatcacaatctaaccaaagaataaacaagataaagagagtagagaaaagatatcaacatcaagaaatgtt 2999806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 9765902 - 9765800
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||| | ||||||| ||||| |||||||   | |||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  9765902 agttcggtccaata-tgacctaatctgggggagagagc-agctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 9765806  T
Q  245 tagctt 250  Q
    ||||||    
T  9765805 tagctt 9765800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 8965701 - 8965815
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| ||||||||| |||||||| || |||||| |||||||||||||||||||||| ||||   |||| |||||||    
T  8965701 agttcggtccaact-tgacctaatatgggggagagatttatctctccgatgcactatcaatgagttcttacaaagagatataaaa-gggttataagaaat 8965798  T
Q  245 tagcttcaacaagctca 261  Q
    || ||||||||| ||||    
T  8965799 taacttcaacaaactca 8965815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 1822423 - 1822335
Alignment:
Q  175 ggagagattgatctctccaatccactataa-tgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||||||||||||| |||||| | |||||| || ||||| ||||| ||||   ||||||||||||||||||||||||||||||    
T  1822423 ggagagattgatctctccaattcactattagtgagttatttacaaatagatataaaagg-gttacaagaaattagcttcaacaagctcac 1822335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 1856868 - 1856780
Alignment:
Q  175 ggagagattgatctctccaatccactataa-tgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||||||||||||| |||||| | |||||| || ||||| ||||| ||||   ||||||||||||||||||||||||||||||    
T  1856868 ggagagattgatctctccaattcactattagtgagttatttacaaatagatataaaagg-gttacaagaaattagcttcaacaagctcac 1856780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 257
Target Start/End: Complemental strand, 11137320 - 11137073
Alignment:
Q  12 aaattaccacaagcaataacaaca-atctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngt 110  Q
    |||| ||||||||||| || |||| ||||| ||||| ||||| || |||||  | ||||||||||||||| |||||| | |||||||||||       ||    
T  11137320 aaataaccacaagcaacaataacatatctaaatctaatctagcaatcaagtataaagaaaaaccacaatcgaaccaatgaataaacaagataaagagagt 11137221  T
Q  111 agagaaaagataacaaca-ccaagaaatgttcatc-tagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatga 207  Q
    |||||||| | ||||||| | ||||| | || | | ||||||||||||||||||||||||| | |||||| ||   || |||||||| |||||| |||||    
T  11137220 agagaaaacaaaacaacatcaaagaattctttaccttagttcggtccaacaatgacctactat-gaggag-ga---atatctccaattcactatcaatga 11137126  T
Q  208 g----ttcttacaaagagatacaaaattagttacaagaaattagcttcaacaag 257  Q
    |    || ||||||||||||||||||   |||| ||||||||||||||||||||    
T  11137125 gtttttttttacaaagagatacaaaa-cggttataagaaattagcttcaacaag 11137073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 38864017 - 38863961
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat 202  Q
    ||||||||| |||||| ||||||| || ||| |||||||||||||||||||||||||    
T  38864017 agttcggtctaacaataacctactatgcaggggagattgatctctccaatccactat 38863961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 15290683 - 15290614
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  15290683 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 15290614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 15471052 - 15470983
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  15471052 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 15470983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 42575333 - 42575402
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  42575333 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 42575402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 3231872 - 3231921
Alignment:
Q  212 ttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||  |||| || ||||||||||||||||||||||    
T  3231872 ttacaaagagatacaaaatg-gttaaaaaaaattagcttcaacaagctcac 3231921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 262
Target Start/End: Complemental strand, 10929872 - 10929842
Alignment:
Q  232 agttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||||||||||||    
T  10929872 agttacaagaaattagcttcaacaagctcac 10929842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 10929907 - 10929865
Alignment:
Q  186 tctctccaatccactat-aatgagttcttacaaagagatacaa 227  Q
    ||||||||||||||||| ||||||||||||||||||| |||||    
T  10929907 tctctccaatccactatcaatgagttcttacaaagagttacaa 10929865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 30909487 - 30909413
Alignment:
Q  185 atctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctc 260  Q
    ||||||||||| |||||| || ||||  |||||||||||||||||   |||||||||||||||| || |||||||||    
T  30909487 atctctccaattcactatcaacgagtcattacaaagagatacaaag--agttacaagaaattagtttaaacaagctc 30909413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 10240256 - 10240197
Alignment:
Q  203 aatgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||| |||||||||| ||| ||  ||||||||||||||| ||||||||||||||    
T  10240256 aatgagttctttacaaagagatccaacatg-gttacaagaaattagattcaacaagctcac 10240197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 5 - 262
Target Start/End: Original strand, 17871 - 18128
Alignment:
Q  5 caaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaagg-ataaacaagatnn 103  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||| |||||||||||      
T  17871 caaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaaatgcatagcaaaaccacaatctaaccaaaggaataaacaagataa 17970  T
Q  104 nnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat- 202  Q
         ||| |||||||||||||||||||||||||||||| | |||||| |||||   |||||||| |||||||||||||||||||||||||||||||||     
T  17971 agagagtaaagaaaagataacaacaccaagaaatgttcacccagttcgatccaaacttgacctaccctggaggagagattgatctctccaatccactatc 18070  T
Q  203 aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  18071 aatgagtt-ttacaaagagatac-aaatgagttacaagaaattagcttcaacaagctcac 18128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 146; Significance: 6e-77; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 27637495 - 27637737
Alignment:
Q  19 cacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa 118  Q
    ||||||||| ||||||||| |||| |||||||| ||| ||||||||||| |||||||||||| ||| || | |||||||||||       ||| ||||||    
T  27637495 cacaagcaacaacaacaatatagacctagtctataaaccaagtgcatagcaaaaccacaatccaactaaggaataaacaagataaagagagtaaagaaaa 27637594  T
Q  119 gataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagttcttacaaa 218  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  27637595 gataacaacaccaagaaatattcacccagttcggtccaacaatgacctactctgcaggagagattgatctctccaatccactataatgagttcttacaaa 27637694  T
Q  219 gagatacaaaattagttacaagaaattagcttcaacaagctca 261  Q
    ||||||||||||  ||||||||||||||| || ||||||||||    
T  27637695 gagatacaaaatgggttacaagaaattagtttaaacaagctca 27637737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 55 - 262
Target Start/End: Complemental strand, 40147510 - 40147304
Alignment:
Q  55 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtc 154  Q
    ||||||||||||  |||||||||||  ||||||||||||||||||||       ||| ||||||||||| ||||| || ||||||||| | |||||||||    
T  40147510 aacaagtgcataacaaaaccacaattcaaccaaaggataaacaagataaatagagtaaagaaaagataaaaacacaaaaaaatgttcacccagttcggtc 40147411  T
Q  155 caacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 253  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  40147410 caact-tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttacaagaaattagcttcaa 40147313  T
Q  254 caagctcac 262  Q
    |||||||||    
T  40147312 caagctcac 40147304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 213772 - 213508
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaagga-taaacaag 99  Q
    ||||||||||||||  ||||||||||||||||||||| |||| ||||||||  ||  |||||||||| |||||||||||| ||   ||||| ||||||||    
T  213772 taaccaaatgtaaaaaaccacaagcaataacaacaatatagacctagtctattaactaagtgcatagcaaaaccacaatcaaaagcaaggaataaacaag 213673  T
Q  100 atnnnnnnng--tagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatcc 197  Q
    ||       |  || || ||||||||||||||||||||||||||| | ||||||||||||   ||||||||| |||||||||||||||||||||||||||    
T  213672 ataaagagagagtaaaggaaagataacaacaccaagaaatgttcacccagttcggtccaaacttgacctactatggaggagagattgatctctccaatcc 213573  T
Q  198 actat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||||||    
T  213572 actatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagctttaacaagctcac 213508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 5058334 - 5058088
Alignment:
Q  17 accacaagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaagga-taaacaagatnnnnnnngtaga 113  Q
    ||||||||||| ||||||||| ||  || |||||||| ||  ||||||||||| ||||||| |||| ||   ||||| ||||||||||       ||| |    
T  5058334 accacaagcaacaacaacaatatatagacctagtctataat-caagtgcatagtaaaaccataatccaaagcaaggaataaacaagataaagagagtaaa 5058236  T
Q  114 gaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttct 212  Q
    ||||||||||||||||||||||||||||| | |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  5058235 gaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctagaggagagattgatctctccaatccactatcaatgagttct 5058137  T
Q  213 tacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||||| ||||  | ||||||||| ||||||||||||||||||    
T  5058136 tacaaagagatac-aaatgggatacaagaaaatagcttcaacaagctcac 5058088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 262
Target Start/End: Original strand, 16640814 - 16641062
Alignment:
Q  12 aaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngt- 110  Q
    |||| ||||||||||| ||||| ||||||||| || |||||||| ||| ||||||  ||||||||||| |||| |||| |||| ||||||       |      
T  16640814 aaataaccacaagcaacaacaaaaatctagatttaatctagaaatcaaatgcataacaaaaccacaatttaactaaagaataagcaagataaatagagag 16640913  T
Q  111 -agagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagt 209  Q
     | |||||||||||||||||||||||||||| | | ||||||| || ||  |||||||||||||||||||||||||||||||||||||||||| |  |||    
T  16640914 caaagaaaagataacaacaccaagaaatgtttacccagttcggccctact-tgacctactctggaggagagattgatctctccaatccactatca--agt 16641010  T
Q  210 tcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||||||||||||  |||||  |||||| |||||||||||||||||    
T  16641011 tcttacaaagagatacaaaa-gagttatcagaaatcagcttcaacaagctcac 16641062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 126 - 262
Target Start/End: Complemental strand, 13239930 - 13239794
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    ||||||| || |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13239930 acaccaaaaattgttcacccagttcggtccaaatttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagata 13239831  T
Q  225 caaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||  |||||||||||||||||||||||||| ||||    
T  13239830 caaaa-gagttacaagaaattagcttcaacaagttcac 13239794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 126 - 262
Target Start/End: Complemental strand, 28278494 - 28278359
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    |||||||||| |||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  28278494 acaccaagaattgttcacccagttcggtccaact-tgacctactctggaggagagattgatctctccaatccactatcaatgagtttttacaaagagata 28278396  T
Q  225 caaaattagttacaagaaattagcttcaacaagctcac 262  Q
    | ||||  ||||||||||||||||||||||||||||||    
T  28278395 c-aaatgggttacaagaaattagcttcaacaagctcac 28278359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 260
Target Start/End: Complemental strand, 317032 - 316807
Alignment:
Q  36 atctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaa 135  Q
    ||||||||||  ||||| || |||||| | || |||||||||||  |||||||| |||||||| ||       |||| ||||||| |||||||| |||||    
T  317032 atctagatcttatctagcaaccaagtgtaaagcaaaaccacaattgaaccaaagaataaacaaaataaagagagtagggaaaagagaacaacacaaagaa 316933  T
Q  136 atgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattag 233  Q
     |||| | | |||||||||||||||||||||||||| | ||||||||||||| |||| ||||| ||| ||||||||| ||||||||||||||||||  |     
T  316932 ttgtttaccaagttcggtccaacaatgacctactctaggggagagattgatccctccgatccattatcaatgagttctttacaaagagatacaaaagga- 316834  T
Q  234 ttacaagaaattagcttcaacaagctc 260  Q
    |||||||||||||||||||||||||||    
T  316833 ttacaagaaattagcttcaacaagctc 316807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 126 - 261
Target Start/End: Complemental strand, 16452258 - 16452124
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    ||||||||||||||| | | |||||||||||||  ||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  16452258 acaccaagaaatgtttacccagttcggtccaact-tgacctactctgggggagagatttatctctccaatccactatgaatgagttcttacaaagagata 16452160  T
Q  225 caaaattagttacaagaaattagcttcaacaagctca 261  Q
    | ||||  |||||||||||||||||||||||||||||    
T  16452159 c-aaatgggttacaagaaattagcttcaacaagctca 16452124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 37439309 - 37439200
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||    
T  37439309 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagtt 37439211  T
Q  236 acaagaaatta 246  Q
    |||||||||||    
T  37439210 acaagaaatta 37439200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 262
Target Start/End: Original strand, 9049332 - 9049467
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    ||||||| ||||||| ||| | |||||||||||  | ||||||| ||| ||||| |||||||||||||||||||| | ||||||||||||||||||||||    
T  9049332 acaccaaaaaatgtttatccatttcggtccaact-tcacctactttgggggagatattgatctctccaatccactgtcaatgagttcttacaaagagata 9049430  T
Q  225 caaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||  ||||||||||||||||||||||||||||||    
T  9049431 caaaatg-gttacaagaaattagcttcaacaagctcac 9049467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 27015808 - 27015599
Alignment:
Q  19 cacaagcaataacaacaatctagat--ctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaa 116  Q
    ||||||||| ||||||||| || ||  |||||||| ||  ||||||||||  |||||||||||  |||||||| |||||||||||       ||| ||||    
T  27015808 cacaagcaacaacaacaatatatatacctagtctataat-caagtgcatatcaaaaccacaattcaaccaaagcataaacaagataaagagagtaaagaa 27015710  T
Q  117 aagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac 215  Q
    || |||||| |||||| ||||||||| | |||||||||||||  ||||||| | |||||||||||||||||| | ||||||||||| |||||||||||||    
T  27015709 aaaataaca-caccaaaaaatgttcacccagttcggtccaact-tgacctattttggaggagagattgatctgtacaatccactatcaatgagttcttac 27015612  T
Q  216 aaagagatacaaa 228  Q
    |||||||||||||    
T  27015611 aaagagatacaaa 27015599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 538192 - 538068
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||| ||| |||||||||||||  ||||||| | ||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |  |||    
T  538192 tgttgatccagttcggtccaact-tgacctaatatgggggagagattgatctctccaatctactatcaatgagttcttacaaagagatacaaa-tgggtt 538095  T
Q  236 acaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||||||||    
T  538094 acaagaaattagcttcaacaagctcac 538068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 161 - 250
Target Start/End: Complemental strand, 25412904 - 25412815
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 250  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||    
T  25412904 tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggttacaagaaattagctt 25412815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 13488361 - 13488246
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  13488361 agttcggtccaact-tgacctaatctcggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 13488264  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||| ||||    
T  13488263 tagcttcaacaagttcac 13488246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 42428440 - 42428555
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  42428440 agttcggtccaact-tgacctaatatgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 42428537  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||| ||||    
T  42428538 tagcttcaacaagttcac 42428555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 113 - 203
Target Start/End: Complemental strand, 4160791 - 4160701
Alignment:
Q  113 agaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactata 203  Q
    ||||||||||||||||| || |||| || | | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4160791 agaaaagataacaacactaataaatatttacccagtttggtccaacaatgacctactctggaggagagattgatctctccaatccactata 4160701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 13343228 - 13343116
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||  |||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||  | ||    
T  13343228 tgttcacccagttcggtccaaacatgacctactctggaggagagattgaactctccaatccactatcaatgagttctt-caaagagatacaaaagga-tt 13343131  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  13343130 acaagaaattagctt 13343116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 36074043 - 36074155
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||||| ||||||||||||   ||||||||| ||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||  ||||    
T  36074043 tgttcatccagttcggtccaaacttgacctactttggaggagagattgaactctccaatccactatcaatgagttctt-caaagagatacaaaa-gagtt 36074140  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  36074141 acaagaaattagctt 36074155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 533927 - 533812
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |  ||||||| ||||    
T  533927 agttcggtccaact-tgacctaatatgggggagagattgatctttccaatccactatcaatgagttcttacaaagagatacaaa-tgggttacaaaaaat 533830  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||||||||    
T  533829 tagcttcaacaagctcac 533812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 9789224 - 9789335
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  |||    
T  9789224 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gagt 9789322  T
Q  235 tacaagaaattag 247  Q
    |||||||||||||    
T  9789323 tacaagaaattag 9789335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 16409643 - 16409532
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  |||    
T  16409643 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gagt 16409545  T
Q  235 tacaagaaattag 247  Q
    |||||||||||||    
T  16409544 tacaagaaattag 16409532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 26178050 - 26177939
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  |||    
T  26178050 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gagt 26177952  T
Q  235 tacaagaaattag 247  Q
    |||||||||||||    
T  26177951 tacaagaaattag 26177939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 8565954 - 8566071
Alignment:
Q  144 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 242  Q
    |||||||||||||||  ||||||| |||||  ||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||  ||||||||||    
T  8565954 ctagttcggtccaact-tgacctaatctgggtgagagattgatctctccaatccactatcaatgagttcttacagagggatac-aaatgggttacaagaa 8566051  T
Q  243 attagcttcaacaagctcac 262  Q
    |||||||| |||||||||||    
T  8566052 attagcttaaacaagctcac 8566071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 126 - 262
Target Start/End: Original strand, 13695680 - 13695816
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagttc-ttacaaagagat 223  Q
    ||||||||||||||| | |||||| |||||||   ||||||||| ||||||||||| | ||||||| ||||||||| |||||||||| ||||||||||||    
T  13695680 acaccaagaaatgtttacctagtttggtccaagt-tgacctactatggaggagagaataatctctctaatccactattaatgagttctttacaaagagat 13695778  T
Q  224 acaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||   |||||||||||||||||| |||||||||||    
T  13695779 acaaaa-gggttacaagaaattagctttaacaagctcac 13695816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 30182756 - 30182643
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||||| ||||||||||||   |||| |||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||| ||||   |||    
T  30182756 tgttcatccagttcggtccaaacttgacatactctggaggagagattgaactctccaatccactatcaatgagttcttccaaagagatagaaaa-gggtt 30182658  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  30182657 acaagaaattagctt 30182643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 33831824 - 33831723
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||| | ||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||| ||||||||    
T  33831824 tgacctaatatgggggagagattgatctcttcaatccactatcaatgagttcttacaaagagatacaaa-tgggttacaagaaattagcttaaacaagct 33831726  T
Q  260 cac 262  Q
    |||    
T  33831725 cac 33831723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 262
Target Start/End: Original strand, 42309963 - 42310060
Alignment:
Q  165 ctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||| ||| ||||||||||||||| | |||||||||| ||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  42309963 ctactatgggggagagattgatctcgctaatccactatcaataagttcttacaaagagatacaaaag-agttacaagaaattagcttcaacaagctcac 42310060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 32636982 - 32636879
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||||    
T  32636982 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaaagagttcttacaaagagatac-aaatgggttacaagaaat 32636885  T
Q  245 tagctt 250  Q
    ||||||    
T  32636884 tagctt 32636879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 42426243 - 42426354
Alignment:
Q  144 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 242  Q
    ||||||| |||||||  ||||||| || || |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||| ||||||    
T  42426243 ctagttcagtccaact-tgacctaatcagggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttgcaagaa 42426340  T
Q  243 attagcttcaacaa 256  Q
    ||||||||||||||    
T  42426341 attagcttcaacaa 42426354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 18441648 - 18441759
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  |||    
T  18441648 tgttcacccagttcggtccaaacttgacctactctagaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gagt 18441746  T
Q  235 tacaagaaattag 247  Q
    |||||||||||||    
T  18441747 tacaagaaattag 18441759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 30682932 - 30683049
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgag--ttcttacaaagagatacaaaattagttacaagaa 242  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||  |||||||||||| ||||||||   ||||||||||    
T  30682932 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagtattcttacaaagaaatacaaaa-gggttacaagaa 30683029  T
Q  243 attagcttcaacaagctcac 262  Q
    ||||||||||||||| ||||    
T  30683030 attagcttcaacaagttcac 30683049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 175 - 262
Target Start/End: Original strand, 39468587 - 39468674
Alignment:
Q  175 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||    
T  39468587 ggagagattgatctctctaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagttcac 39468674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 148 - 256
Target Start/End: Original strand, 28750667 - 28750774
Alignment:
Q  148 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaatta 246  Q
    |||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||  |||||| |||||||    
T  28750667 ttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaaaagatac-aaatgggttacaggaaatta 28750764  T
Q  247 gcttcaacaa 256  Q
     |||||||||    
T  28750765 acttcaacaa 28750774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 38747135 - 38747048
Alignment:
Q  175 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||||||||||||||| |||| |||||||| || |||||||||||||| |  ||||||||||||||||||||||||||||||    
T  38747135 ggagagattgatctctccaatcctctatcaatgagtttttccaaagagatacaaa-tgggttacaagaaattagcttcaacaagctcac 38747048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 10593426 - 10593312
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 233  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  10593426 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 10593329  T
Q  234 ttacaagaaattagctt 250  Q
    |||||||||||||||||    
T  10593328 ttacaagaaattagctt 10593312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 218
Target Start/End: Complemental strand, 26170930 - 26170848
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 218  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  26170930 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaa 26170848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 262
Target Start/End: Original strand, 3075648 - 3075783
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    ||||||||||||||||| | | || ||||||||  ||||||||| ||  ||||||||||||||||||||| |||||| || || |||||||||| |||||    
T  3075648 acaccaagaaatgttcacccaatttggtccaact-tgacctactatgagggagagattgatctctccaattcactatcaacgaattcttacaaaaagata 3075746  T
Q  225 caaaattagttacaagaaattagcttcaacaagctcac 262  Q
    | ||||  ||||||||||||||| |||| |||||||||    
T  3075747 c-aaatgggttacaagaaattagattcagcaagctcac 3075783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 260
Target Start/End: Original strand, 33906042 - 33906154
Alignment:
Q  149 tcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaatta 246  Q
    ||||||||||| ||||||||||| | | |||||||||||| ||||||| ||||| ||||||||| ||||||||||||||||||  | ||||||||| |||    
T  33906042 tcggtccaacattgacctactctagggaagagattgatctttccaatctactatcaatgagttctttacaaagagatacaaaagga-ttacaagaagtta 33906140  T
Q  247 gcttcaacaagctc 260  Q
    ||||| ||||||||    
T  33906141 gcttcgacaagctc 33906154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 10054823 - 10054935
Alignment:
Q  144 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaaga 241  Q
    |||||| ||||||||||| ||| ||| ||| ||||| |||||| |||||||| |||||| ||||||||| ||||||||||||||||||   |||| ||||    
T  10054823 ctagtttggtccaacaattacccactttgggggagatattgatatctccaatacactatcaatgagttcattacaaagagatacaaaa--ggttataaga 10054920  T
Q  242 aattagcttcaacaa 256  Q
    |||||||||||||||    
T  10054921 aattagcttcaacaa 10054935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 31183129 - 31183015
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| |||||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||  | ||||||||||||    
T  31183129 agttcggtccaact-tgacctaatatgggggagagatagatctctccaatccagtatcaatgagttcttacaaagggatacaaa--tggttacaagaaat 31183033  T
Q  245 tagcttcaacaagctcac 262  Q
    || ||| ||||| |||||    
T  31183032 taacttaaacaaactcac 31183015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 29722692 - 29722582
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  29722692 tgttcacccagttcggtccaaatttgacctactctggaggagagattgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 29722595  T
Q  235 tacaagaaattag 247  Q
    |||||||||||||    
T  29722594 tacaagaaattag 29722582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 29751160 - 29751270
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  29751160 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 29751257  T
Q  235 tacaagaaattag 247  Q
    |||||||||||||    
T  29751258 tacaagaaattag 29751270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 22536290 - 22536403
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||| |||||||||||| || |||||||||| |||| |||||||||   ||    
T  22536290 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactccccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 22536387  T
Q  235 tacaagaaattagctt 250  Q
    ||||||||||||||||    
T  22536388 tacaagaaattagctt 22536403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 30793314 - 30793210
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagat 223  Q
    ||||||||||||||| | || |||||||||||||||||| |||||| | |||||||  |||||||||| | |||||| ||| ||||| ||||||||||||    
T  30793314 acaccaagaaatgtttaccttgttcggtccaacaatgacttactctaggggagaga--gatctctccacttcactatcaattagttctttacaaagagat 30793217  T
Q  224 acaaaat 230  Q
    |||||||    
T  30793216 acaaaat 30793210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 40751277 - 40751195
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaacca 86  Q
    ||||||||||||||   |||||||||||||||||||| |||| ||| |||| ||| ||||||||||| ||||||||||| ||||||    
T  40751277 taaccaaatgtaaa---ccacaagcaataacaacaatatagacctaatctataaaccaagtgcatagcaaaaccacaatttaacca 40751195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 3326063 - 3325958
Alignment:
Q  156 aacaatgacctactctggaggagagattgatctctccaatccactataat-gagttctt-acaaagagatacaaaattagttacaagaaattagcttcaa 253  Q
    |||||||||||||| ||   |||| ||||||||||| ||||||| || || |||||||| ||||||||||||| |||  |||||||||||||||||||||    
T  3326063 aacaatgacctactatgtgagagatattgatctctctaatccaccatcattgagttctttacaaagagatacacaatg-gttacaagaaattagcttcaa 3325965  T
Q  254 caagctc 260  Q
    |||||||    
T  3325964 caagctc 3325958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 42926968 - 42926911
Alignment:
Q  203 aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctca 261  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||    
T  42926968 aatgagttcttacaaagagatacaaa-tgagttacaagaaattagcttcaacaatctca 42926911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 29720532 - 29720422
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||| ||||||||||||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  29720532 tgttcacccagttcggtccaaacttgacctactctagaggagagattgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 29720435  T
Q  235 tacaagaaattag 247  Q
    |||||||||||||    
T  29720434 tacaagaaattag 29720422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 25078289 - 25078211
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  25078289 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 25078211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 25136258 - 25136180
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  25136258 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 25136180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 40380259 - 40380181
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||| ||||||||||||||||  |||||||||||    
T  40380259 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgaactctccaatccactatcaaatgagttctt 40380181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 40382470 - 40382392
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||| ||||||||||||||||  |||||||||||    
T  40382470 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgaactctccaatccactatcaaatgagttctt 40382392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 42927069 - 42926967
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 224  Q
    ||||||||||||||| | | |||||||||||||  ||||||||| ||   |||||||| || ||| ||||||||| | ||||||||||||||||||||||    
T  42927069 acaccaagaaatgtttacccagttcggtccaact-tgacctactatgagagagagatttatttcttcaatccactgtcaatgagttcttacaaagagata 42926971  T
Q  225 caaa 228  Q
    ||||    
T  42926970 caaa 42926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 19806521 - 19806466
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat 202  Q
    |||||||||||||  ||||||| ||||| ||||||||||||||||||||||||||||    
T  19806521 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactat 19806466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 260
Target Start/End: Original strand, 10700581 - 10700771
Alignment:
Q  69 aaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaa-gaaatgttcatctagttcggtccaacaatgaccta 167  Q
    |||||||||||| || ||||| |||| ||||||       |||||||||||| |||||||| || ||| | || |   ||||||||  ||||||||||||    
T  10700581 aaaaccacaatcaaatcaaagaataagcaagataaagagcgtagagaaaagagaacaacacgaaagaattatttactcagttcggtgaaacaatgaccta 10700680  T
Q  168 ctctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaattagcttcaacaagctc 260  Q
    || ||| |||||||  |||||||||| | |||||| ||||||||| ||  |||||||||||||| | |||| ||| |||||||||||||||||||    
T  10700681 ctatgggggagaga--gatctctccacttcactatcaatgagttctttttaaagagatacaaaaat-gttataag-aattagcttcaacaagctc 10700771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 16544568 - 16544499
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  16544568 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 16544499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 16546790 - 16546721
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  16546790 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 16546721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 40763269 - 40763200
Alignment:
Q  17 accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaacca 86  Q
    |||| |||||||||||||||| |||| ||| |||| ||| ||||||||||| ||||||| ||| ||||||    
T  40763269 accataagcaataacaacaatatagacctaatctataaaccaagtgcatagcaaaaccataatttaacca 40763200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 14689503 - 14689548
Alignment:
Q  212 ttacaaagagatacaaaattagttacaagaaattagcttcaacaagc 258  Q
    |||||||||||||||||| || |||||| ||||||||||||||||||    
T  14689503 ttacaaagagatacaaaaata-ttacaaaaaattagcttcaacaagc 14689548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 8e-64; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 45727231 - 45726972
Alignment:
Q  1 taaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaag 99  Q
    ||||||||||||||| | |||||||||| ||||| ||| |||| |||||||| |||  |||||||||| |||||||||||| |||||||| |||||  ||    
T  45727231 taaccaaatgtaaataaaccacaagcaacaacaataatatagacctagtctataaactaagtgcatagcaaaaccacaatccaaccaaagaataaa--ag 45727134  T
Q  100 atnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccac 199  Q
    ||       ||| ||||||||||||||||| || ||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  45727133 ataaagagagtaaagaaaagataacaacactaaaaaatgttcacccagttcggtccaact-tgacctactctggaggagagattgatctctccaatccac 45727035  T
Q  200 tat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  45727034 tatcaatgagttcttacaaagagatac-aaataggttacaagaaattagcttcaacaagctcac 45726972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 42287975 - 42288235
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||     
T  42287975 taaccaaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaagtgcatagaaaaaccacaatccaaccaaggaataaacaagt 42288074  T
Q  101 tnnnnnnngtagagaaaagataacaacaccaagaaa-tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccac 199  Q
    |       ||| ||||||||||||| |||||||||| | || | | |||||||||||||  ||||||| ||||| ||||||||||||||||||||||||     
T  42288075 taaagagggtaaagaaaagataacagcaccaagaaattattgacccagttcggtccaac-ttgacctaatctgg-ggagagattgatctctccaatccat 42288172  T
Q  200 tat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||| |||||| ||||||||||| |||| ||||  ||||||| ||||||||||||||||||||||    
T  42288173 tatcaatgagctcttacaaagaaatac-aaatgggttacaataaattagcttcaacaagctcac 42288235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 39 - 262
Target Start/End: Original strand, 35446788 - 35447009
Alignment:
Q  39 tagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatg 138  Q
    ||||||||||||| ||  ||||||||||| |||||||||||  |||||||| |||||||||||       ||| ||||||||||||||||||||||||||    
T  35446788 tagatctagtctataat-caagtgcatagcaaaaccacaattcaaccaaagcataaacaagataaagagagtaaagaaaagataacaacaccaagaaatg 35446886  T
Q  139 ttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttac 237  Q
    |||| | |||||||||||||  ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||    
T  35446887 ttcacccagttcggtccaac-ttgacctactctggaggagagagtgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttac 35446984  T
Q  238 aagaaattagcttcaacaagctcac 262  Q
    |||||||||| ||||||||| ||||    
T  35446985 aagaaattagattcaacaagatcac 35447009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 17 - 273
Target Start/End: Complemental strand, 7451406 - 7451149
Alignment:
Q  17 accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnng--tagag 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||| |||||||| |||||||||||       |  |||||    
T  7451406 accacaagcaataacaacaatctagatctaatctagaaaacaagtgcataacaaaaccacaatcgaaccaaagaataaacaagataaagagagagtagag 7451307  T
Q  115 aaaagata-acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttct 212  Q
    |||| ||| |||||||||| ||||||||| | |||||| ||||||  ||||||||| | |||||||||||||||||| ||||||||||| |||||||| |    
T  7451306 aaaa-atagacaacaccaataaatgttcacccagttcg-tccaact-tgacctactgtagaggagagattgatctctgcaatccactatcaatgagttat 7451210  T
Q  213 tacaaagagatacaaaattagttacaagaaattagcttcaacaag-ctcacccaagttgctc 273  Q
    ||||||||||||| |||| | |||||||||||||||||||||||| || || ||||||||||    
T  7451209 tacaaagagatac-aaatgaattacaagaaattagcttcaacaagtcttactcaagttgctc 7451149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 23 - 262
Target Start/End: Complemental strand, 33648454 - 33648214
Alignment:
Q  23 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagata 122  Q
    ||||| |||||||||||||  ||| |||| ||  ||||||||||| |||| ||||||  ||| |||| |||||||||||       |||||||||||| |    
T  33648454 agcaacaacaacaatctaggcctaatctataagccaagtgcatagcaaaatcacaattaaactaaagaataaacaagataaagagagtagagaaaagaca 33648355  T
Q  123 acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaaga 220  Q
    |||||||||| ||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||    
T  33648354 acaacaccaataaatgtttacccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccgctatcaatgagttctttacaaaga 33648255  T
Q  221 gatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
     ||||||||   |||||| |||||||||||||||||||||||    
T  33648254 aatacaaaa-gggttacaggaaattagcttcaacaagctcac 33648214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 17450877 - 17450671
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 100  Q
    |||||||||||||||   ||||||||| |||||||||||| | ||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  17450877 taaccaaatgtaaat---cacaagcaacaacaacaatctaaacctaatctagaaaccaagtgcatagcaaaaccacaatctaaccaaaggataaacaaga 17450781  T
Q  101 tnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccact 200  Q
    |       ||| ||||||||||||||||||||  | |||||| |||||||||||||||  ||||||||||| | ||||||||||||||||||||||||||    
T  17450780 taaagagagtacagaaaagataacaacaccaaagattgttcacctagttcggtccaac-ttgacctactct-gtggagagattgatctctccaatccact 17450683  T
Q  201 at-aatgagttc 211  Q
    || |||||||||    
T  17450682 atcaatgagttc 17450671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 24398332 - 24398100
Alignment:
Q  34 caatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa---gataacaacacc 130  Q
    ||||||| ||||| ||||||||  |||||||||| |||||| |||||  ||||| |  ||||||||||       ||||||||||   ||||||||||||    
T  24398332 caatctaaatctaatctagaaactaagtgcatagcaaaaccgcaatcggaccaa-gactaaacaagataaagagagtagagaaaaatagataacaacacc 24398234  T
Q  131 aagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaa 227  Q
    ||| ||| ||||| | |||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  24398233 aagtaattgttcagccagttcggtccaacaatgacctactatgggggagagattgatctctccaatccattatcaatgagttctttacaaagagatacaa 24398134  T
Q  228 aattagttacaagaaattagcttcaacaagctcac 262  Q
    ||   ||||||||||||||||||||||||||||||    
T  24398133 aa-gggttacaagaaattagcttcaacaagctcac 24398100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 114 - 262
Target Start/End: Original strand, 1631710 - 1631857
Alignment:
Q  114 gaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttct 212  Q
    |||||||||||||||| ||||||| ||||   |||||||||||||  |||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  1631710 gaaaagataacaacactaagaaatattcactcagttcggtccaact-tgacctactctggaggagagattgatttctccaatccactatcaatgagttct 1631808  T
Q  213 tacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||||| ||||  ||||||||| ||||||||||||||||||||    
T  1631809 tacaaagagatac-aaatgggttacaagatattagcttcaacaagctcac 1631857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 2334427 - 2334543
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||| ||||||    
T  2334427 agttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagttactagaaat 2334525  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||| ||||    
T  2334526 tagcttcaacaagttcac 2334543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 137 - 262
Target Start/End: Original strand, 36988076 - 36988201
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||    
T  36988076 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagtt 36988174  T
Q  236 acaagaaattagcttcaacaagctcac 262  Q
    |||||||||||| ||  ||||||||||    
T  36988175 acaagaaattagttttgacaagctcac 36988201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 17490143 - 17490273
Alignment:
Q  131 aagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaa 229  Q
    |||||||||| | | |||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  17490143 aagaaatgtttacccagttcggtccaa-attgacctactctaggggagagattgatctctacaatccactatcaatgagttcttacaaagagttacaaaa 17490241  T
Q  230 ttagttacaagaaattagcttcaacaagctcac 262  Q
      |||||||||||||||||||||||||||||||    
T  17490242 g-agttacaagaaattagcttcaacaagctcac 17490273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 146 - 259
Target Start/End: Original strand, 17057379 - 17057491
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| ||||    
T  17057379 agttcggtccaact-tgacctagtctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttacaaaaaat 17057476  T
Q  245 tagcttcaacaagct 259  Q
    |||||||||||||||    
T  17057477 tagcttcaacaagct 17057491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 146 - 259
Target Start/End: Original strand, 17085362 - 17085474
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| ||||    
T  17085362 agttcggtccaact-tgacctagtctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttacaaaaaat 17085459  T
Q  245 tagcttcaacaagct 259  Q
    |||||||||||||||    
T  17085460 tagcttcaacaagct 17085474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 6595015 - 6595131
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||   ||||||||||||    
T  6595015 agttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaacgagttcttacaaagagattcaaaa-gggttacaagaaat 6595113  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||| ||||    
T  6595114 tagcttcaacaagttcac 6595131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 36773720 - 36773605
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  |||| || ||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||||||||||||    
T  36773720 agttcggtccaact-tgacataatctgggggagagattgatctctccaatccactatcaaagagttcttacaaagagatacaaa-tgagttacaagaaat 36773623  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||||||||    
T  36773622 tagcttcaacaagctcac 36773605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 723754 - 723869
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||    
T  723754 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaat 723851  T
Q  245 tagcttcaacaagctcac 262  Q
    |||||| |||||||||||    
T  723852 tagcttaaacaagctcac 723869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 33162458 - 33162575
Alignment:
Q  144 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 242  Q
    |||||||||||||||  ||||||| ||| | ||||||||||||||||| |||||||||| |||||||||||||| ||||||||||| |  ||||||||||    
T  33162458 ctagttcggtccaact-tgacctaatctaggggagagattgatctctctaatccactatcaatgagttcttacagagagatacaaa-tgggttacaagaa 33162555  T
Q  243 attagcttcaacaagctcac 262  Q
    ||||||||||||||||||||    
T  33162556 attagcttcaacaagctcac 33162575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 4503133 - 4503245
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||  ||||    
T  4503133 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttctt-caaagagatacaaaa-gagtt 4503230  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  4503231 acaagaaattagctt 4503245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 5723256 - 5723369
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   | ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  5723256 tgttcacccagttcggtccaaacttaacctactctagaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-aggtt 5723354  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  5723355 acaagaaattagctt 5723369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 45099922 - 45099810
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||  ||||    
T  45099922 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttctt-caaagagatacaaaa-gagtt 45099825  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  45099824 acaagaaattagctt 45099810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 7815311 - 7815395
Alignment:
Q  175 ggagagattgatctctccaatccactataa-tgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  7815311 ggagagattaatctctccaatccactataaatgagttcttacaaagagatacaaaag-agttacaagaaattagcttcaacaagct 7815395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 36318019 - 36318134
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  |||||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||| ||||    
T  36318019 agttcggtccaact-tgacctactctaagggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaataaat 36318116  T
Q  245 tagcttcaacaagctcac 262  Q
    ||| ||||||||||||||    
T  36318117 tagtttcaacaagctcac 36318134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 260
Target Start/End: Original strand, 30217945 - 30218168
Alignment:
Q  37 tctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaa 136  Q
    |||||||| | |||||||| |||||| | |  | |||||||||| |||||||| |||||||||||       |||||||||| | | | ||||||| |||    
T  30217945 tctagatccaatctagaaaccaagtgtaaaacacaaccacaatcaaaccaaagaataaacaagataaagagagtagagaaaa-agagctacaccaaaaaa 30218043  T
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaaaattagt 234  Q
    |||| | | ||||| ||||||||||||| |||||||| |||| ||||||||| | ||| ||||||| ||||| ||  |||||||||||||||||| | ||    
T  30218044 tgtttaccgagttcagtccaacaatgacttactctgggggagtgattgatcttttcaacccactatcaatgaattatttacaaagagatacaaaa-tggt 30218142  T
Q  235 tacaagaaattagcttcaacaagctc 260  Q
    ||||||||||||||||||| ||||||    
T  30218143 tacaagaaattagcttcaataagctc 30218168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 42362496 - 42362395
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||| ||||| |||||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||  |||||||||||||||||| ||||||||    
T  42362496 tgacctaatctgggggagagatagatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaattagcttaaacaagct 42362398  T
Q  260 cac 262  Q
    |||    
T  42362397 cac 42362395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 11067463 - 11067348
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||| ||||||| ||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  11067463 agttcggtccaact-tgacctaatctgggggagagattgatctcttcaatccattataaatgagttcttacaaagagatac-aaatgggttacaagaaat 11067366  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||  ||||||||||    
T  11067365 tagctttgacaagctcac 11067348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 38312398 - 38312283
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  |||| || ||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||  ||||||||||||    
T  38312398 agttcggtccaact-tgacataatctgggggagagattgatctctccaatccactatcaatgagatcttacaaagagatac-aaatgggttacaagaaat 38312301  T
Q  245 tagcttcaacaagctcac 262  Q
    ||| ||||||||| ||||    
T  38312300 tagtttcaacaagttcac 38312283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 26353341 - 26353227
Alignment:
Q  147 gttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaatt 245  Q
    ||||||||||||  |||||||||||   ||||||| |||||||||||||||||||| ||||||| |||||||| |||||||||| | |||||||||||||    
T  26353341 gttcggtccaact-tgacctactctaagggagagagtgatctctccaatccactatcaatgagtacttacaaaaagatacaaaagt-gttacaagaaatt 26353244  T
Q  246 agcttcaacaagctcac 262  Q
    ||||||||||| |||||    
T  26353243 agcttcaacaaactcac 26353227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 250
Target Start/End: Original strand, 4484354 - 4484444
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagttacaagaaattagctt 250  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||   ||||||||||||||||||    
T  4484354 tgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gggttacaagaaattagctt 4484444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 14633835 - 14633951
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagttacaagaaa 243  Q
    |||||||||||||  ||||||| ||||| ||||||||||||||||||||||||||||  |||||||||||| |||| ||||| ||||  |||||||||||    
T  14633835 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatctatgagttcttacaaaagggatac-aaatgggttacaagaaa 14633932  T
Q  244 ttagcttcaacaagctcac 262  Q
    ||||||| |||||||||||    
T  14633933 ttagcttaaacaagctcac 14633951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 34139780 - 34139896
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa-gagatacaaaattagttacaagaaa 243  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| | |||||| | |  |||||||||||    
T  34139780 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaaagggatacata-tgggttacaagaaa 34139877  T
Q  244 ttagcttcaacaagctcac 262  Q
    ||||||| |||||||||||    
T  34139878 ttagcttaaacaagctcac 34139896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 11151601 - 11151716
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||| |||||||||||||||||||||  | |||||||||||||| ||||| ||||  ||||||||||||    
T  11151601 agttcggtccaact-tgacctaatctgggggagaggttgatctctccaatccactatctaagagttcttacaaagtgatac-aaatgggttacaagaaat 11151698  T
Q  245 tagcttcaacaagctcac 262  Q
    |||||| |||||||||||    
T  11151699 tagcttaaacaagctcac 11151716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 29868027 - 29867924
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||||    
T  29868027 agttcggtccaact-tgacctaatttgggggagagattgatctctccaatccactatcaaagagttcttacaaagagatac-aaatgggttacaagaaat 29867930  T
Q  245 tagctt 250  Q
    ||||||    
T  29867929 tagctt 29867924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 28672088 - 28672036
Alignment:
Q  148 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccact 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28672088 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccact 28672036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 32289732 - 32289621
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||||||||| |||  ||||| ||||||||||||| ||||||||||||||  |||    
T  32289732 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctctaatttactatcaatgagttcttacaaaagagatacaaaa-gagt 32289634  T
Q  235 tacaagaaattag 247  Q
    |||||||||||||    
T  32289633 tacaagaaattag 32289621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 30833490 - 30833404
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagttacaagaaatta 246  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||   ||||||||||||||    
T  30833490 tgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gggttacaagaaatta 30833404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 126 - 259
Target Start/End: Original strand, 42019859 - 42019995
Alignment:
Q  126 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgag---ttcttacaaagag 221  Q
    |||||||||| |||| ||| | || ||||||||||| ||||||| ||| | ||||||||||||||| ||| |||||| ||||||   || ||||||||||    
T  42019859 acaccaagaagtgtttatccaatttggtccaacaataacctactatggggaagagattgatctctcaaattcactatcaatgagttttttttacaaagag 42019958  T
Q  222 atacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||||  |||||||||||||||||||| |||||||    
T  42019959 atacaaaa-gagttacaagaaattagcttctacaagct 42019995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 11049698 - 11049596
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 259  Q
    ||||||| | || ||||||||||||||| | ||||| ||||| ||||||||||||||||||||||| |||   |||| ||||||||||||||||||||||    
T  11049698 tgacctattatgaaggagagattgatcttttcaatctactatcaatgagttcttacaaagagatactaaaagggttataagaaattagcttcaacaagct 11049599  T
Q  260 cac 262  Q
    |||    
T  11049598 cac 11049596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 36205665 - 36205777
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||||||||||| ||||||| ||||||||||| || | ||||||||||| |||||||||||||||  ||||    
T  36205665 tgttcacccagttcggtccaaacttgacctactctggaggatagattgaactctccaatccgctgtcaatgagttctt-caaagagatacaaaa-gagtt 36205762  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  36205763 acaagaaattagctt 36205777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 11690668 - 11690544
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||| ||| |||||||||||||  |||| || | ||| |||||| ||||||||||||||||||||| || || ||||||||||| |||||||| |  |||    
T  11690668 tgttgatccagttcggtccaact-tgacgtaatatgggggagaggttgatctctccaatccactatcaacgatttcttacaaagggatacaaa-tgggtt 11690571  T
Q  236 acaagaaattagcttcaacaagctcac 262  Q
    ||||||||||||||| |||||||||||    
T  11690570 acaagaaattagcttaaacaagctcac 11690544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 13121901 - 13121812
Alignment:
Q  171 tggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||| ||| ||||||||||| ||||||||  ||||||||||||||||    |||||||||||||| |||||||||||||||    
T  13121901 tggaggagagattgatttcttcaatccactatcaatgagtttctacaaagagatacaaag---gttacaagaaattatcttcaacaagctcac 13121812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 6266859 - 6266749
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  6266859 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 6266762  T
Q  235 tacaagaaattag 247  Q
    |||||||||||||    
T  6266761 tacaagaaattag 6266749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 13656041 - 13656146
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttacaaa-gagatacaaaattagttacaagaa 242  Q
    ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||||||| | ||||||| |   ||||||||||    
T  13656041 agttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaagag--gttacaagaa 13656138  T
Q  243 attagctt 250  Q
    ||||||||    
T  13656139 attagctt 13656146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 12647386 - 12647464
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  12647386 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 12647464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 39284994 - 39284930
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagtt 210  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||    
T  39284994 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagtt 39284930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 257
Target Start/End: Original strand, 7597020 - 7597131
Alignment:
Q  145 tagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaa 242  Q
    |||||||||| ||||||||||||||||| ||||||||  |||||||||  || || || ||||||||| ||||||| ||||||||||  | |||||||||    
T  7597020 tagttcggtctaacaatgacctactctgaaggagaga--gatctctccgttctacaatcaatgagttctttacaaaaagatacaaaa-gacttacaagaa 7597116  T
Q  243 attagcttcaacaag 257  Q
    ||||| ||| |||||    
T  7597117 attagtttcgacaag 7597131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 262
Target Start/End: Original strand, 14202450 - 14202530
Alignment:
Q  175 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||         || ||||||||||||||||||| |||||||||||    
T  14202450 ggagagattgatctctccaatctactatcaatgagttcttacaaag--------gatgagttacaagaaattagcttaaacaagctcac 14202530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 260
Target Start/End: Original strand, 42261524 - 42261609
Alignment:
Q  176 gagagattgatctctccaatccactat-aatgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaagctc 260  Q
    |||||| ||||||||||  | |||||| ||||||| ||| ||||||| ||||||||  |||||||||||||||||||||||||||||    
T  42261524 gagagaatgatctctccgcttcactatcaatgagtactttacaaagatatacaaaag-agttacaagaaattagcttcaacaagctc 42261609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 42412161 - 42412121
Alignment:
Q  161 tgacctactctggaggagagattgatctctccaatccactat 202  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  42412161 tgacctactctgg-ggagagattgatctctccaatccactat 42412121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 4561180 - 4561137
Alignment:
Q  212 ttacaaagagatacaaaattagttacaagaaattagcttcaacaa 256  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  4561180 ttacaaagagatacaaaaat-gttacaagaaattagcttcaacaa 4561137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 260
Target Start/End: Original strand, 34811295 - 34811345
Alignment:
Q  209 ttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctc 260  Q
    |||||||||||||||| ||||  |||||||| ||||||||||||||||||||    
T  34811295 ttcttacaaagagatataaaag-agttacaataaattagcttcaacaagctc 34811345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 7616 - 7370
Alignment:
Q  17 accacaagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagag 114  Q
    ||||||||||| ||||| ||| ||  || |||||||| ||| ||||||||||| |||||||||||  ||||||||||||||||||||       ||| ||    
T  7616 accacaagcaacaacaataatatatagacctagtctataaaccaagtgcatagcaaaaccacaattcaaccaaaggataaacaagataaagagagtaaag 7517  T
Q  115 aaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctt 213  Q
    |||||||||||||||||||||||||||| | |||||||||||||  | ||||||||| |||||||||||||||| ||||||||||||| |||||||||||    
T  7516 aaaagataacaacaccaagaaatgttcacccagttcggtccaac-ttaacctactctagaggagagattgatctttccaatccactatcaatgagttctt 7418  T
Q  214 acaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    |||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  7417 acaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 7370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 10793 - 10546
Alignment:
Q  1 taaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 100  Q
    |||||||| | |||| ||||||||||| ||||||||||||||| || |||||||| |||||| |||| ||||| ||||||||| ||||| ||||||||||    
T  10793 taaccaaaagaaaataaccacaagcaacaacaacaatctagatttaatctagaaatcaagtgtatagtaaaactacaatctaatcaaagaataaacaaga 10694  T
Q  101 tnnnnnnn-gtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccac 199  Q
    |        |||||| ||||||||||||||||||||||||| | | |||||||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  10693 taaaagagagtagaggaaagataacaacaccaagaaatgtttacccagttcggtccaact-tgacctactctggaggagagattgatctcttcaatccac 10595  T
Q  200 tat-aatgagttcttacaaagagatacaaaattagttacaagaaattagc 248  Q
    ||| || |||||||||||||||||||||||| | ||||||| ||||||||    
T  10594 tatcaacgagttcttacaaagagatacaaaa-tggttacaataaattagc 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 134 - 260
Target Start/End: Original strand, 27439 - 27566
Alignment:
Q  134 aaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaaaatt 231  Q
    ||||||| | ||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| ||||  |||||||||||||| ||||     
T  27439 aaatgtttacctaattcggtccaacaatgacctactatgggggagagattgatctctccaatccactatcaataagttatttacaaagagatac-aaatg 27537  T
Q  232 agttacaagaaattagcttcaacaagctc 260  Q
    |||||||||||||||||||||||||||||    
T  27538 agttacaagaaattagcttcaacaagctc 27566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 11725 - 11612
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  11725 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaagagatac-aaatgagtt 11627  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  11626 acaagaaattagctt 11612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 114770 - 114657
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||||| ||||||||| ||   | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  114770 tgttcatccagttcggtctaaacttaacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gcgtt 114672  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  114671 acaagaaattagctt 114657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 434701 - 434588
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||   |||    
T  434701 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 434603  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  434602 acaagaaattagctt 434588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 260
Target Start/End: Original strand, 490359 - 490444
Alignment:
Q  176 gagagattgatctctccaatccactat-aatgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaagctc 260  Q
    |||||| ||||||||||  | |||||| ||||||| ||| ||||||| ||||||||  |||||||||||||||||||||||||||||    
T  490359 gagagaatgatctctccgcttcactatcaatgagtactttacaaagatatacaaaag-agttacaagaaattagcttcaacaagctc 490444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 259
Target Start/End: Original strand, 149107 - 149219
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||  || |||||||||    
T  149107 agttcggtccaact-taacctactctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagata-taaatgggtaacaagaaat 149204  T
Q  245 tagcttcaacaagct 259  Q
    |||||||||||||||    
T  149205 tagcttcaacaagct 149219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 20425 - 20540
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 244  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||  ||||||||||||    
T  20425 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccaatatcaaagagttcttacaaagagatac-aaatgggttacaagaaat 20522  T
Q  245 tagcttcaacaagctcac 262  Q
    ||||||||||||| ||||    
T  20523 tagcttcaacaagttcac 20540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 1083 - 971
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 235  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| |||||||| || |||||||||||||||   |||    
T  1083 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttgtt-caaagagatacaaaa-gggtt 986  T
Q  236 acaagaaattagctt 250  Q
    |||||||||||||||    
T  985 acaagaaattagctt 971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 8735 - 8846
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| || |||||||||| ||||||||||||||   ||    
T  8735 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaacgagttcttacaaaagagatacaaaa-gggt 8833  T
Q  235 tacaagaaattag 247  Q
    |||||||||||||    
T  8834 tacaagaaattag 8846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 11161 - 11272
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 234  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| || |||||||||| ||||||||||||||   ||    
T  11161 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaacgagttcttacaaaagagatacaaaa-gggt 11259  T
Q  235 tacaagaaattag 247  Q
    |||||||||||||    
T  11260 tacaagaaattag 11272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 3735 - 3804
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  3735 agttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaaatgagttctt 3804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 2604 - 2682
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  2604 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 2682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 80351 - 80408
Alignment:
Q  204 atgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 262  Q
    ||||||||||||||| ||||||||| |  ||| ||||||||||||||||||||||||||    
T  80351 atgagttcttacaaaaagatacaaa-tgggttgcaagaaattagcttcaacaagctcac 80408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 1291 - 1360
Alignment:
Q  32 aacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagat 101  Q
    ||||||||||||||| |||||||| |||||| | || |||||||||||| |||||||  ||||| |||||    
T  1291 aacaatctagatctaatctagaaaccaagtgtaaagtaaaaccacaatcaaaccaaaaaataaataagat 1360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 6432 - 6363
Alignment:
Q  146 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 213  Q
    ||||||||||||   | |||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  6432 agttcggtccaaacttaacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 6363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 6981 - 7025
Alignment:
Q  137 tgttcatctagttcggtccaacaatgacctactctggaggagaga 181  Q
    |||| ||| |||||||||||| ||||||||||||| |||||||||    
T  6981 tgtttatccagttcggtccaataatgacctactctagaggagaga 7025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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