View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9363_low_26 (Length: 266)
Name: NF9363_low_26
Description: NF9363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9363_low_26 |
 | |
|
| [»] scaffold0129 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 23717240 - 23717480
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23717240 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
23717339 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23717340 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
23717439 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
23717440 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
23717480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 32742219 - 32742459
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32742219 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
32742318 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32742319 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
32742418 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
32742419 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
32742459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 35216631 - 35216391
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35216631 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
35216532 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35216531 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
35216432 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
35216431 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
35216391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 38223387 - 38223147
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38223387 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
38223288 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38223287 |
catcatgagggtacaagagtttcgttgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
38223188 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
38223187 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
38223147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 9313562 - 9313802
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9313562 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcagtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
9313661 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9313662 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctatgatattcacacgttcttgatgctgtagaaaccactcata |
9313761 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
9313762 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
9313802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 42989167 - 42988927
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42989167 |
acatcaacagactcactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
42989068 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42989067 |
catcatgagggtacagaagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
42988968 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
42988967 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
42988927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 3522887 - 3522647
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3522887 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
3522788 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3522787 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
3522688 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
3522687 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
3522647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 10269208 - 10269448
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10269208 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
10269307 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10269308 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
10269407 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
10269408 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
10269448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 335776 - 335536
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
335776 |
acatcaacatacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
335677 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
335676 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
335577 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
335576 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
335536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 14219188 - 14218948
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219188 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
14219089 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219088 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
14218989 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14218988 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
14218948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 30704105 - 30704345
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30704105 |
acatcaacagacccactctcgccaaaacgatgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcatgtagagaagttaaaatctgaat |
30704204 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30704205 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
30704304 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
30704305 |
aacaaccttctccatgtcaggatattttgttggtttgtgtc |
30704345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 14677355 - 14677115
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14677355 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
14677256 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14677255 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
14677156 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14677155 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
14677115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 45107114 - 45106874
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45107114 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
45107015 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45107014 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
45106915 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
45106914 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
45106874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 1085593 - 1085833
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1085593 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
1085692 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1085693 |
catcatgagggtacaagagtttcattgtatctcttgccttctacaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
1085792 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
1085793 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
1085833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 22 - 251
Target Start/End: Complemental strand, 21395911 - 21395682
Alignment:
| Q |
22 |
cccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgaggg |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21395911 |
cccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgaggg |
21395812 |
T |
|
| Q |
122 |
tacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttct |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21395811 |
tacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttct |
21395712 |
T |
|
| Q |
222 |
ccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
||||||||||||||||||||||||| |||| |
|
|
| T |
21395711 |
ccatgtcaggatattttgctggtttgtgtc |
21395682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 17195378 - 17195618
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
17195378 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtacagaagttaaaatctgaat |
17195477 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17195478 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
17195577 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||| |||| |
|
|
| T |
17195578 |
aacaaccttctccatatcaggatattttgcttgtttgtgtc |
17195618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 10485669 - 10485429
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10485669 |
acatcaacagacccactctcgccaaaatgacgaaatgactttatgccatgtcggtgcttgaatttcccaagtcatcctgtagagaagttaaaatctgaat |
10485570 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
10485569 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtaaaaaccactcata |
10485470 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
10485469 |
aacaaccttctccacgtcaggatattttgctggtttgtgtc |
10485429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 49550095 - 49550335
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||| ||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49550095 |
acatcaatagacccactctcgccaaaaggatgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
49550194 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49550195 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
49550294 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
49550295 |
aacaaccttctccatgtcaggatattttattggtttgtgtc |
49550335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 133 - 251
Target Start/End: Complemental strand, 5926651 - 5926533
Alignment:
| Q |
133 |
cattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcagga |
232 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5926651 |
cattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcagga |
5926552 |
T |
|
| Q |
233 |
tattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||| |||| |
|
|
| T |
5926551 |
tattttgctggtttgtgtc |
5926533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 133 - 251
Target Start/End: Original strand, 27182471 - 27182589
Alignment:
| Q |
133 |
cattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcagga |
232 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27182471 |
cattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcagga |
27182570 |
T |
|
| Q |
233 |
tattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||| |||| |
|
|
| T |
27182571 |
tattttgctggtttgtgtc |
27182589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 44553301 - 44553541
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44553301 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
44553400 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44553401 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
44553500 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
44553501 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
44553541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 38518163 - 38518403
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38518163 |
acatcaacagacccactctcgccaaaatgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
38518262 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38518263 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
38518362 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
38518363 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
38518403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 34945789 - 34945549
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34945789 |
acatcaacagacccactctcgccaaaatgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
34945690 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
34945689 |
catcatgagggtgcaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgttgtagaaaccactcata |
34945590 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
34945589 |
aacaacattctccatgtcaggatattttgctggtttgtgtc |
34945549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 116 - 251
Target Start/End: Original strand, 27644504 - 27644639
Alignment:
| Q |
116 |
tgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaa |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27644504 |
tgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtaatattcacacgttcttgatgctgtagaaaccactcataaacaa |
27644603 |
T |
|
| Q |
216 |
ccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |
|
|
| T |
27644604 |
ccttctccatgtcaggatattttgctggtttgtgtc |
27644639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 20394982 - 20394862
Alignment:
| Q |
131 |
ttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcag |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20394982 |
ttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcag |
20394883 |
T |
|
| Q |
231 |
gatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||| |||| |
|
|
| T |
20394882 |
gatattttgctggtttgtgtc |
20394862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 233; Significance: 1e-129; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 16641825 - 16642065
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16641825 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
16641924 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16641925 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
16642024 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
16642025 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
16642065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 41774128 - 41773888
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41774128 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
41774029 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41774028 |
catcatgagggtacaagagtttcattgtatctcttgccttctacaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
41773929 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
41773928 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
41773888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 2026895 - 2026655
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2026895 |
acatcaacagacccactctcgacaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
2026796 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2026795 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
2026696 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2026695 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
2026655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 37038760 - 37039000
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37038760 |
acatcaacagacccactctcgtcaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
37038859 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37038860 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
37038959 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
37038960 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
37039000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 43488288 - 43488048
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43488288 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
43488189 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43488188 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
43488089 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
43488088 |
aacaactttctccatgtcaggatattttgctggtttgtgtc |
43488048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 23415881 - 23415641
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23415881 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
23415782 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
23415781 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgaaattcacacgttcttgatgctgtagaaaccactcata |
23415682 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
23415681 |
aacaaccttctccatgtcaggatattttactggtttgtgtc |
23415641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 3615504 - 3615264
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3615504 |
acatcaacagacccactctcgtcaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
3615405 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
3615404 |
catcatgagggtataagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgttgtagaaaccactcata |
3615305 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
3615304 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
3615264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 2272800 - 2272560
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2272800 |
acatcaacatacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
2272701 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2272700 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
2272601 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2272600 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
2272560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 3535114 - 3534874
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3535114 |
acatcaacagacccactctcgccaaaacgacgaaataactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
3535015 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3535014 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
3534915 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
3534914 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
3534874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 12533175 - 12532940
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12533175 |
acatcaacagacccactctcgccaaaatgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
12533076 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12533075 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
12532976 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggttt |
246 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||| |
|
|
| T |
12532975 |
aacaacattctccttgtcaggatattttgctggttt |
12532940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 7356517 - 7356754
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
7356517 |
acatcaacaaacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatt-cccaagccatcctgtagagaagttaaaatctgaat |
7356615 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
7356616 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactc--a |
7356713 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
7356714 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
7356754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0129 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: scaffold0129
Description:
Target: scaffold0129; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 39070 - 39310
Alignment:
| Q |
11 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgttggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
110 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
39070 |
acatcaatagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcatgtagagaagttaaaatctgaat |
39169 |
T |
|
| Q |
111 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39170 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
39269 |
T |
|
| Q |
211 |
aacaaccttctccatgtcaggatattttgctggtttatgtc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
39270 |
aacaaccttctccatgtcaggatattttgctggtttgtgtc |
39310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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