View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9363_low_43 (Length: 238)
Name: NF9363_low_43
Description: NF9363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9363_low_43 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 2422645 - 2422867
Alignment:
| Q |
16 |
tattcttcatgtcatgtcgaccaccataaaaggggtactatgttaagtcataaatactttgcttgattcttgattctcgataatttttgtatagctagtt |
115 |
Q |
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| T |
2422645 |
tattcttcatgtcatgtcgaccaccataaaaggggtactatgttaagtcataaatactttgcttgattcttgattctcgataatttttgtatagctagtt |
2422744 |
T |
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| Q |
116 |
ccaaataagcctaacttatattttgcaattttttaagcccattttttgttgaatgaaattacgaaccattgtctgaaaaaccaattgttcatgcaagttg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
2422745 |
ccaaataagcctaacttatattttgcaattttttaagcccattttttgttgaatgaaattacaaaccattgtctgaaaaaccaattgttcatgcaagttg |
2422844 |
T |
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| Q |
216 |
gatttaaaggtttgaaatatcgt |
238 |
Q |
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||||||||||||||||||||||| |
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| T |
2422845 |
gatttaaaggtttgaaatatcgt |
2422867 |
T |
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