View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9365_low_10 (Length: 424)

Name: NF9365_low_10
Description: NF9365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9365_low_10
NF9365_low_10
[»] chr7 (45 HSPs)
chr7 (258-399)||(25483536-25483677)
chr7 (64-136)||(25483217-25483289)
chr7 (309-399)||(3117313-3117403)
chr7 (309-399)||(36121427-36121517)
chr7 (308-399)||(35670367-35670458)
chr7 (313-399)||(8932513-8932599)
chr7 (313-399)||(37658128-37658214)
chr7 (311-378)||(30999378-30999445)
chr7 (313-399)||(9806602-9806688)
chr7 (313-399)||(30582671-30582757)
chr7 (310-408)||(33982319-33982417)
chr7 (317-399)||(39870034-39870116)
chr7 (313-399)||(40061163-40061249)
chr7 (310-408)||(43544900-43544998)
chr7 (309-372)||(6476922-6476985)
chr7 (308-399)||(35747020-35747111)
chr7 (313-399)||(1601993-1602078)
chr7 (313-383)||(25751111-25751181)
chr7 (303-368)||(28494320-28494385)
chr7 (326-399)||(31619518-31619591)
chr7 (313-377)||(41406188-41406252)
chr7 (308-399)||(31436260-31436351)
chr7 (313-372)||(46534408-46534467)
chr7 (313-399)||(596125-596211)
chr7 (309-399)||(31030777-31030867)
chr7 (302-372)||(46349924-46349994)
chr7 (310-398)||(585904-585992)
chr7 (310-398)||(1602067-1602154)
chr7 (308-368)||(31031938-31031998)
chr7 (309-368)||(4060348-4060407)
chr7 (313-368)||(6243867-6243922)
chr7 (309-368)||(14792161-14792220)
chr7 (313-368)||(21920840-21920895)
chr7 (313-368)||(27826709-27826764)
chr7 (316-399)||(33979619-33979702)
chr7 (313-368)||(42329067-42329122)
chr7 (313-368)||(43156568-43156623)
chr7 (313-408)||(44104580-44104675)
chr7 (310-368)||(28958166-28958224)
chr7 (313-399)||(31969479-31969565)
chr7 (310-348)||(42825997-42826035)
chr7 (313-399)||(42833737-42833823)
chr7 (313-399)||(44570932-44571018)
chr7 (314-368)||(48935236-48935290)
chr7 (314-378)||(1602160-1602224)
[»] chr8 (39 HSPs)
chr8 (310-399)||(38760823-38760912)
chr8 (308-399)||(42353705-42353794)
chr8 (307-399)||(43150246-43150338)
chr8 (303-399)||(43873948-43874044)
chr8 (313-399)||(18146342-18146428)
chr8 (313-399)||(45069832-45069918)
chr8 (308-399)||(35253043-35253134)
chr8 (313-408)||(45237797-45237892)
chr8 (313-399)||(12208806-12208892)
chr8 (313-399)||(12453234-12453320)
chr8 (310-408)||(31642753-31642851)
chr8 (309-372)||(3512467-3512530)
chr8 (313-399)||(43129590-43129676)
chr8 (309-366)||(35160316-35160373)
chr8 (313-372)||(5838256-5838315)
chr8 (356-399)||(34617705-34617748)
chr8 (312-399)||(38364484-38364571)
chr8 (308-399)||(40532053-40532143)
chr8 (308-399)||(45236977-45237068)
chr8 (361-399)||(25133258-25133296)
chr8 (317-399)||(29051186-29051268)
chr8 (313-399)||(35019487-35019573)
chr8 (313-378)||(29725741-29725806)
chr8 (308-372)||(2773623-2773687)
chr8 (308-368)||(20697550-20697610)
chr8 (308-368)||(35057345-35057405)
chr8 (308-368)||(43800813-43800873)
chr8 (309-368)||(22215107-22215166)
chr8 (305-368)||(39733718-39733781)
chr8 (313-372)||(40529501-40529560)
chr8 (313-399)||(39104191-39104277)
chr8 (356-398)||(41356333-41356375)
chr8 (308-373)||(53509-53574)
chr8 (313-366)||(284818-284871)
chr8 (313-366)||(631006-631059)
chr8 (313-366)||(816818-816871)
chr8 (307-372)||(16786571-16786636)
chr8 (308-368)||(25099408-25099468)
chr8 (309-368)||(38747001-38747061)
[»] chr3 (39 HSPs)
chr3 (314-399)||(46114989-46115074)
chr3 (309-399)||(32111573-32111663)
chr3 (310-408)||(43860723-43860821)
chr3 (313-399)||(34785891-34785977)
chr3 (310-399)||(42167345-42167434)
chr3 (308-408)||(39534945-39535045)
chr3 (310-378)||(50935710-50935778)
chr3 (313-399)||(5505932-5506018)
chr3 (313-399)||(40374521-40374607)
chr3 (310-399)||(2229183-2229272)
chr3 (307-399)||(40980153-40980245)
chr3 (313-399)||(7041730-7041816)
chr3 (313-399)||(12122894-12122980)
chr3 (308-370)||(12764666-12764728)
chr3 (317-399)||(22978083-22978165)
chr3 (317-399)||(36806926-36807008)
chr3 (310-408)||(48071973-48072071)
chr3 (310-399)||(39129371-39129460)
chr3 (315-399)||(36660149-36660233)
chr3 (307-399)||(46668335-46668427)
chr3 (313-399)||(6586265-6586351)
chr3 (313-399)||(42877240-42877326)
chr3 (313-399)||(48747404-48747490)
chr3 (313-399)||(32390127-32390215)
chr3 (303-368)||(34436019-34436084)
chr3 (313-378)||(39129300-39129365)
chr3 (313-378)||(41888809-41888874)
chr3 (308-368)||(19274725-19274785)
chr3 (313-368)||(8321475-8321530)
chr3 (313-368)||(9558904-9558959)
chr3 (313-372)||(32999697-32999756)
chr3 (313-368)||(41991728-41991783)
chr3 (313-372)||(51980732-51980791)
chr3 (313-399)||(41889434-41889520)
chr3 (313-366)||(4070816-4070869)
chr3 (362-399)||(44896079-44896116)
chr3 (307-348)||(45355124-45355165)
chr3 (308-368)||(12055559-12055619)
chr3 (308-368)||(17666797-17666857)
[»] chr5 (35 HSPs)
chr5 (309-399)||(11575618-11575708)
chr5 (307-372)||(35766553-35766618)
chr5 (308-399)||(1923942-1924033)
chr5 (308-399)||(4559493-4559584)
chr5 (315-369)||(3703454-3703508)
chr5 (313-399)||(8520567-8520653)
chr5 (313-399)||(13018994-13019080)
chr5 (309-399)||(20768881-20768971)
chr5 (310-399)||(15524359-15524448)
chr5 (310-399)||(20017319-20017408)
chr5 (306-368)||(34589970-34590032)
chr5 (306-368)||(37530789-37530851)
chr5 (310-379)||(3033390-3033459)
chr5 (313-378)||(8520497-8520562)
chr5 (313-368)||(5050146-5050201)
chr5 (313-368)||(6789658-6789713)
chr5 (313-368)||(7615046-7615101)
chr5 (356-399)||(7948451-7948494)
chr5 (313-368)||(15498645-15498700)
chr5 (313-368)||(24171365-24171420)
chr5 (309-372)||(26286177-26286240)
chr5 (313-368)||(29525365-29525420)
chr5 (313-368)||(41734313-41734368)
chr5 (313-368)||(42422807-42422862)
chr5 (313-368)||(42709311-42709366)
chr5 (310-368)||(76411-76469)
chr5 (313-399)||(3078554-3078640)
chr5 (310-368)||(25881504-25881562)
chr5 (329-378)||(3033335-3033384)
chr5 (315-368)||(16218352-16218405)
chr5 (313-366)||(17645306-17645359)
chr5 (308-365)||(23590634-23590691)
chr5 (308-372)||(36944280-36944344)
chr5 (308-348)||(36959461-36959501)
chr5 (355-399)||(41356263-41356307)
[»] chr4 (44 HSPs)
chr4 (313-399)||(48368982-48369068)
chr4 (308-399)||(19912668-19912759)
chr4 (312-399)||(51924025-51924112)
chr4 (308-399)||(55610658-55610749)
chr4 (313-399)||(30411265-30411351)
chr4 (313-399)||(50792429-50792515)
chr4 (313-399)||(30653499-30653584)
chr4 (313-378)||(19869960-19870025)
chr4 (310-399)||(48953027-48953116)
chr4 (313-408)||(10658887-10658982)
chr4 (313-408)||(10873032-10873127)
chr4 (313-408)||(43590534-43590629)
chr4 (313-399)||(202290-202376)
chr4 (313-399)||(26923552-26923638)
chr4 (309-399)||(28459608-28459698)
chr4 (313-399)||(45549653-45549739)
chr4 (308-368)||(39840239-39840299)
chr4 (308-399)||(2390283-2390374)
chr4 (313-400)||(19870985-19871072)
chr4 (356-399)||(31997875-31997918)
chr4 (313-399)||(27531830-27531916)
chr4 (307-368)||(19801907-19801968)
chr4 (313-398)||(20986274-20986359)
chr4 (315-396)||(50790826-50790907)
chr4 (315-399)||(1771853-1771937)
chr4 (308-348)||(24152671-24152711)
chr4 (308-372)||(25686981-25687045)
chr4 (308-344)||(30996710-30996746)
chr4 (313-368)||(6238188-6238243)
chr4 (313-368)||(33984088-33984143)
chr4 (315-378)||(49646027-49646090)
chr4 (313-368)||(53284007-53284062)
chr4 (313-371)||(14269864-14269922)
chr4 (314-368)||(37114478-37114532)
chr4 (312-394)||(45618060-45618142)
chr4 (315-377)||(55660548-55660610)
chr4 (313-399)||(7113524-7113614)
chr4 (313-366)||(28778556-28778609)
chr4 (313-366)||(49335237-49335290)
chr4 (316-373)||(49648859-49648916)
chr4 (308-344)||(318740-318776)
chr4 (308-372)||(30653331-30653395)
chr4 (319-399)||(38005551-38005631)
chr4 (308-368)||(45561360-45561419)
[»] chr2 (36 HSPs)
chr2 (307-399)||(40862217-40862308)
chr2 (314-399)||(18109728-18109813)
chr2 (310-399)||(38928503-38928592)
chr2 (313-399)||(33178961-33179047)
chr2 (308-397)||(1086038-1086127)
chr2 (303-395)||(8341172-8341264)
chr2 (313-408)||(37240949-37241044)
chr2 (310-408)||(11447237-11447335)
chr2 (313-399)||(14452300-14452386)
chr2 (310-399)||(6322153-6322242)
chr2 (316-372)||(5774096-5774152)
chr2 (315-399)||(15265354-15265438)
chr2 (327-399)||(28125019-28125091)
chr2 (313-408)||(36600937-36601032)
chr2 (308-399)||(39532057-39532148)
chr2 (309-368)||(42519710-42519769)
chr2 (313-408)||(44525991-44526086)
chr2 (313-368)||(45376909-45376964)
chr2 (305-399)||(7183295-7183389)
chr2 (313-399)||(26340047-26340133)
chr2 (314-399)||(38245913-38245998)
chr2 (308-368)||(12160958-12161018)
chr2 (308-372)||(35422038-35422102)
chr2 (313-369)||(42097955-42098011)
chr2 (312-368)||(43496161-43496217)
chr2 (313-399)||(10247398-10247482)
chr2 (313-368)||(11018076-11018131)
chr2 (313-368)||(14958120-14958175)
chr2 (313-368)||(30523609-30523664)
chr2 (313-368)||(39241205-39241260)
chr2 (313-378)||(6319537-6319602)
chr2 (313-366)||(24520264-24520317)
chr2 (308-368)||(10361388-10361448)
chr2 (308-368)||(16496660-16496720)
chr2 (308-368)||(34245241-34245301)
chr2 (310-378)||(38928598-38928666)
[»] chr1 (38 HSPs)
chr1 (315-399)||(42628231-42628315)
chr1 (308-399)||(44502556-44502647)
chr1 (313-399)||(3795977-3796063)
chr1 (313-399)||(31656369-31656455)
chr1 (308-399)||(14390417-14390508)
chr1 (313-399)||(5698126-5698212)
chr1 (313-399)||(27667675-27667761)
chr1 (313-399)||(31496610-31496696)
chr1 (315-399)||(4361073-4361157)
chr1 (310-378)||(4640127-4640195)
chr1 (309-368)||(11823580-11823639)
chr1 (317-408)||(44299948-44300039)
chr1 (313-399)||(44109945-44110031)
chr1 (307-399)||(35179814-35179906)
chr1 (308-399)||(9223835-9223926)
chr1 (313-372)||(41865287-41865346)
chr1 (313-399)||(38667187-38667277)
chr1 (326-399)||(39325530-39325603)
chr1 (313-369)||(2459689-2459745)
chr1 (313-397)||(23259085-23259169)
chr1 (308-368)||(27747602-27747662)
chr1 (313-368)||(1190187-1190242)
chr1 (356-399)||(18545610-18545653)
chr1 (313-368)||(30358074-30358129)
chr1 (313-368)||(39325611-39325666)
chr1 (313-408)||(43847433-43847528)
chr1 (313-368)||(45900169-45900224)
chr1 (313-368)||(50586223-50586278)
chr1 (313-399)||(5698508-5698593)
chr1 (313-399)||(11756885-11756971)
chr1 (313-399)||(30899435-30899521)
chr1 (310-372)||(38058746-38058808)
chr1 (313-375)||(40640679-40640741)
chr1 (310-408)||(42159609-42159707)
chr1 (308-368)||(11332837-11332897)
chr1 (308-368)||(11490858-11490918)
chr1 (315-399)||(34086201-34086285)
chr1 (308-368)||(38815593-38815653)
[»] chr6 (22 HSPs)
chr6 (308-399)||(18368747-18368838)
chr6 (313-399)||(1789787-1789873)
chr6 (309-399)||(190919-191009)
chr6 (313-399)||(15508349-15508435)
chr6 (313-399)||(18801700-18801786)
chr6 (313-399)||(31603925-31604011)
chr6 (310-378)||(32562445-32562513)
chr6 (312-395)||(13866263-13866346)
chr6 (313-408)||(24159238-24159333)
chr6 (313-399)||(4976524-4976610)
chr6 (306-368)||(20992309-20992371)
chr6 (313-378)||(5090118-5090183)
chr6 (315-372)||(25023495-25023552)
chr6 (308-368)||(24119283-24119343)
chr6 (313-368)||(13756364-13756419)
chr6 (301-368)||(20645646-20645713)
chr6 (313-399)||(1290382-1290468)
chr6 (310-368)||(21860231-21860289)
chr6 (310-399)||(34574608-34574697)
chr6 (308-368)||(21778130-21778190)
chr6 (308-368)||(22707286-22707346)
chr6 (327-399)||(31259561-31259633)
[»] scaffold0115 (2 HSPs)
scaffold0115 (308-399)||(4144-4235)
scaffold0115 (308-399)||(11884-11975)
[»] scaffold0009 (1 HSPs)
scaffold0009 (315-408)||(94408-94501)
[»] scaffold0076 (1 HSPs)
scaffold0076 (308-368)||(14235-14295)
[»] scaffold0060 (1 HSPs)
scaffold0060 (313-368)||(57893-57948)
[»] scaffold0007 (1 HSPs)
scaffold0007 (309-368)||(157659-157718)


Alignment Details
Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 258 - 399
Target Start/End: Original strand, 25483536 - 25483677
Alignment:
Q  258 cataccgttctatatttaaatttacgttaaatatgttttgacctt-acacataggttgtgtttggtaatacaaataagctagtttatagcttattctatt 356  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| || ||||||||||||| | |||||||||| ||||    
T  25483536 cataccgttgtatatttaaatttacgttaaatatgttttgacctttacatagaggttgtgtttggaaacacaaataagctagctaatagcttattgtatt 25483635  T
Q  357 agcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||| ||| |||||||||||| ||| ||||||||||||    
T  25483636 agcttataaacttattttgataggat-tgacgtgtttggtaaa 25483677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 25483217 - 25483289
Alignment:
Q  64 tcttcatttcaaacaatattacaccatctgaatcataacatttagaagccatttccagcgagagactctaagg 136  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||| |||||| ||||||||||||||||    
T  25483217 tcttcatttcaaacaatattacaccatttgaatcattacatttagaagcgatttcctgcgagagactctaagg 25483289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 309 - 399
Target Start/End: Complemental strand, 3117403 - 3117313
Alignment:
Q  309 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||||||| | ||||||| ||| |||||| ||||| ||||||||||||||||||||||||||||||| || ||||||| ||||    
T  3117403 aggttgtgtttggtaacaaaaataagttagcttatagtttattatattagcttataagcttgttttgataggatgagacgtgtttgataaa 3117313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 309 - 399
Target Start/End: Original strand, 36121427 - 36121517
Alignment:
Q  309 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||||||| ||||| ||| ||| ||||||||||||  |||||||||||||||||||||||||| ||  |||||||||||||||    
T  36121427 aggttgtgtttggtaacacaaagaagatagcttatagcttattggattagcttataagcttgttttgatagaataagatgtgtttggtaaa 36121517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 308 - 399
Target Start/End: Complemental strand, 35670458 - 35670367
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  35670458 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 35670367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 8932599 - 8932513
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||||||  ||||||||| ||| ||  | |||||||||||||||||||||||| ||| |||||||||||||||    
T  8932599 tgtgtttggtaacacaaataaattagtttataacttgttggactagcttataagcttgttttgatagaatgagatgtgtttggtaaa 8932513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 37658214 - 37658128
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  37658214 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 37658128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 311 - 378
Target Start/End: Complemental strand, 30999445 - 30999378
Alignment:
Q  311 gttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 378  Q
    |||||||||||||| ||||||||| ||||||||||||||||  | ||||| |||||||||||||||||    
T  30999445 gttgtgtttggtaacacaaataagttagtttatagcttattggactagctcataagcttgttttgata 30999378  T

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Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 9806688 - 9806602
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| | ||| ||| ||||||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  9806688 tgtgtttggtaacataaaaaagttagtttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 9806602  T

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Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 30582671 - 30582757
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  |||  ||||||||||||||    
T  30582671 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgatatgtgtttggtaaa 30582757  T

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Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 33982417 - 33982319
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    ||||||||||||| | || |||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||  |||||||    
T  33982417 ggttgtgtttggtgacacgaataagctagcttatagcttgttagactagcttataagcttgttttgatataataagatgtgtttggtaaaaagcttttt 33982319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 399
Target Start/End: Complemental strand, 39870116 - 39870034
Alignment:
Q  317 tttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||| ||||| ||||||| |||||| || ||  |||||||||||||||||||||||||  ||| |||||||||||||||    
T  39870116 tttggtaacacaaaaaagctagcttatagtttgttggattagcttataagcttgttttgataaaatgagatgtgtttggtaaa 39870034  T

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Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 40061163 - 40061249
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | ||||||||||||||||||| |||  ||| |||||||||||||||    
T  40061163 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttaataaaatgagatgtgtttggtaaa 40061249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 43544998 - 43544900
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    ||||||||||||||| || |||||||||  ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||  |||||||    
T  43544998 ggttgtgtttggtaacacgaataagctaacttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaaaagcttttt 43544900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 372
Target Start/End: Original strand, 6476922 - 6476985
Alignment:
Q  309 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    |||||||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||||||    
T  6476922 aggttgtgtttggtaacacaaaaaagctagcttatagcttcttggattagcttataagcttgtt 6476985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 399
Target Start/End: Original strand, 35747020 - 35747111
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||| |  || ||||||| |||||||||||| ||| ||||| |||||||||    
T  35747020 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttcgacaagtttataagattgttttgatagaatgagatgtatttggtaaa 35747111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 1602078 - 1601993
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| | ||| ||||||| ||||||||| ||  | ||||||||||||| |||||||||| ||| |||||||||||||||    
T  1602078 tgtgtttggtaacataaa-aagctagcttatagcttgttggactagcttataagctagttttgatagaatgagatgtgtttggtaaa 1601993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 383
Target Start/End: Original strand, 25751111 - 25751181
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatg 383  Q
    |||||||||||| |||||||||||||||||||  |||||  | || |||| ||||||||||||||||||||    
T  25751111 tgtgtttggtaacacaaataagctagtttataatttattggactaccttacaagcttgttttgataggatg 25751181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 368
Target Start/End: Complemental strand, 28494385 - 28494320
Alignment:
Q  303 acacataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    ||||||||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  28494385 acacataggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 28494320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 399
Target Start/End: Original strand, 31619518 - 31619591
Alignment:
Q  326 acaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||| ||||||||||||||||| ||  | |||||||||||||||||||||||  ||| || ||||||||||||    
T  31619518 acaaaaaagctagtttatagcttgttggactagcttataagcttgttttgataaaatgagacgtgtttggtaaa 31619591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 377
Target Start/End: Original strand, 41406188 - 41406252
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgat 377  Q
    |||||||||||| || |||||||||| ||||||||||||  | || |||||||||||||||||||    
T  41406188 tgtgtttggtaacacgaataagctagcttatagcttattggactatcttataagcttgttttgat 41406252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 399
Target Start/End: Complemental strand, 31436351 - 31436260
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| |||| ||||| ||||||| ||||||||| ||  | || ||||||| ||||||||||||  |||  ||||||||||||||    
T  31436351 taggttgtgtttcgtaacacaaaaaagctagcttatagcttgttggactaacttataaacttgttttgataaaatgaaatgtgtttggtaaa 31436260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 372
Target Start/End: Original strand, 46534408 - 46534467
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||||||    
T  46534408 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagcttgtt 46534467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 596211 - 596125
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| || ||||||||||  |||| ||| ||  | |||||||||||||||||||||||  || | ||||||||||||||    
T  596211 tgtgtttggtaacacgaataagctaggatataacttgttggactagcttataagcttgttttgatataatataatgtgtttggtaaa 596125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 399
Target Start/End: Complemental strand, 31030867 - 31030777
Alignment:
Q  309 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||| |||||||||| | ||| |||||| ||||||| || ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  31030867 aggttatgtttggtaacataaaaaagctaatttatagtttgttggactagcttataagcttgttttgataaaataagatgtgtttggtaaa 31030777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 372
Target Start/End: Complemental strand, 46349994 - 46349924
Alignment:
Q  302 tacacataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    |||| ||||| |||||||||||| ||||| ||||||| ||||||||| ||  |||| ||||||||||||||    
T  46349994 tacatataggctgtgtttggtaacacaaaaaagctagcttatagcttcttggattaacttataagcttgtt 46349924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 398
Target Start/End: Complemental strand, 585992 - 585904
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaa 398  Q
    |||||||||| |||| || |||||||||  ||||||||| ||  | |||||||||||||| ||||||||  ||  ||||||||||||||    
T  585992 ggttgtgtttagtaacacgaataagctaacttatagcttgttggactagcttataagcttattttgataaaataagatgtgtttggtaa 585904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 398
Target Start/End: Complemental strand, 1602154 - 1602067
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaa 398  Q
    ||||||||||| ||| | ||| ||||||  ||||||||| ||  | ||||||||||||| |||||||||| ||| ||||||||||||||    
T  1602154 ggttgtgtttgataacataaa-aagctaacttatagcttgttggactagcttataagctagttttgatagaatgagatgtgtttggtaa 1602067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 31031998 - 31031938
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| |||||||||||| ||||| ||||||||||||||||| ||  |||| ||||||||||    
T  31031998 taggctgtgtttggtaacacaaaaaagctagtttatagcttgttggattaacttataagct 31031938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 368
Target Start/End: Original strand, 4060348 - 4060407
Alignment:
Q  309 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||||||| ||||| ||||||| |||||| || ||  |||||||||||||||    
T  4060348 aggttgtgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataagct 4060407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Original strand, 6243867 - 6243922
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||  ||||||||||||||||| ||  |||||||||||||||    
T  6243867 tgtgtttggtaacacaacaaagctagtttatagcttgttggattagcttataagct 6243922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 368
Target Start/End: Complemental strand, 14792220 - 14792161
Alignment:
Q  309 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    ||||||| |||||||| ||||||||| ||| ||||||||| ||  |||||||||||||||    
T  14792220 aggttgtatttggtaacacaaataagttagcttatagcttgttagattagcttataagct 14792161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 21920895 - 21920840
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||||||||||| ||||||||| ||  | |||||||||||||    
T  21920895 tgtgtttggtaacacaaataagctagcttatagcttgttggactagcttataagct 21920840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Original strand, 27826709 - 27826764
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  27826709 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 27826764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 399
Target Start/End: Original strand, 33979619 - 33979702
Alignment:
Q  316 gtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||| || |||||||||| ||||||||| ||  | || ||||||||| ||||||||||  ||  |||||||||||||||    
T  33979619 gtttggtaacacgaataagctagcttatagcttgttggactaccttataagcatgttttgatataataagatgtgtttggtaaa 33979702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 42329122 - 42329067
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  42329122 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 42329067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Original strand, 43156568 - 43156623
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  43156568 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 43156623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 408
Target Start/End: Complemental strand, 44104675 - 44104580
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    |||||||||||| | ||| ||||||| |||||| || ||  |  | ||||||||||||| ||||||| ||| |||||||||||||||  |||||||    
T  44104675 tgtgtttggtaacaaaaaaaagctagcttatagtttgttggacaaacttataagcttgtcttgatagaatgagatgtgtttggtaaaaagcttttt 44104580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 368
Target Start/End: Complemental strand, 28958224 - 28958166
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    ||||||||||||||| ||||| ||||||| ||||||||| ||  |||| ||||||||||    
T  28958224 ggttgtgtttggtaacacaaaaaagctagcttatagcttgttggattaacttataagct 28958166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 31969565 - 31969479
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||| ||| |||||| || ||  | || ||||||||||||||||||||  |||  ||||||||||||||    
T  31969565 tgtgtttggtaacacaaaaaagttagcttatagattgttggactaacttataagcttgttttgataaaatgaaatgtgtttggtaaa 31969479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 348
Target Start/End: Original strand, 42825997 - 42826035
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagctt 348  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  42825997 ggttgtgtttggtaacacaaataagttagtttatagctt 42826035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 42833823 - 42833737
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||||||| ||||||||   ||||||||| ||  | ||||| |||||||||||||||||  ||  |||||||||| ||||    
T  42833823 tgtgtttggtaatacgaataagctgacttatagcttgttggactagctgataagcttgttttgatataataagatgtgtttgataaa 42833737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 44570932 - 44571018
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||| ||| ||||||||||||  | ||||||||||||| |||||  ||| |||  | ||||||||||||    
T  44570932 tgtgtttggtaacacaaaaaagttagcttatagcttattggactagcttataagctagtttttgtagaatgaaacgtgtttggtaaa 44571018  T

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Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 368
Target Start/End: Original strand, 48935236 - 48935290
Alignment:
Q  314 gtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    ||||||||||| ||||||||||||| ||||||||| ||  ||||| |||||||||    
T  48935236 gtgtttggtaacacaaataagctagcttatagcttgttggattagtttataagct 48935290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 378
Target Start/End: Complemental strand, 1602224 - 1602160
Alignment:
Q  314 gtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 378  Q
    ||||||| ||| || |||||| ||| ||||||||| ||  | |||||||||||||||||||||||    
T  1602224 gtgtttgataacacgaataagatagcttatagcttgttggactagcttataagcttgttttgata 1602160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 310 - 399
Target Start/End: Complemental strand, 38760912 - 38760823
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||||||||||||||| |||||||||||||| ||  | |||||||||||||||||||||||| ||| |||||||||||||||    
T  38760912 ggttgtgtttggtaatacaaataaactagtttatagcttgttggactagcttataagcttgttttgatagaatgagatgtgtttggtaaa 38760823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 308 - 399
Target Start/End: Complemental strand, 42353794 - 42353705
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||||||||||||||| ||| |||||||||| || ||  ||||||||||||| |||||||||||| |  ||||||||||||||||    
T  42353794 taggttgtgtttggtaatacaaaaaagttagtttatagtttgttggattagcttataagtttgttttgatagaa--tgatgtgtttggtaaa 42353705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 307 - 399
Target Start/End: Original strand, 43150246 - 43150338
Alignment:
Q  307 ataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||| |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  43150246 ataggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 43150338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 303 - 399
Target Start/End: Original strand, 43873948 - 43874044
Alignment:
Q  303 acacataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||| |||| |||||||||||  ||||| ||||||||||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  43873948 acacttaggctgtgtttggtaccacaaaaaagctagtttatagcttgttgaactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 43874044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 18146342 - 18146428
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  18146342 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 18146428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 45069918 - 45069832
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  45069918 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 45069832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 308 - 399
Target Start/End: Complemental strand, 35253134 - 35253043
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||||||||| ||||| ||||||| |||||| ||  |  |  ||||||||||||||||||||||| ||| |||||||||||||||    
T  35253134 taggttgtgtttggtaacacaaacaagctagcttatagtttgctggacaagcttataagcttgttttgatagaatgcgatgtgtttggtaaa 35253043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 313 - 408
Target Start/End: Complemental strand, 45237892 - 45237797
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |  ||||||||||||||| ||||||| ||| |||||||||||||||  |||||||    
T  45237892 tgtgtttggtaacacaaaaaagctagcttatagcttgttgaacaagcttataagcttgtcttgatagaatgagatgtgtttggtaaaaagcttttt 45237797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 12208806 - 12208892
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| || ||||||||||||    
T  12208806 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagacgtgtttggtaaa 12208892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 12453234 - 12453320
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| || ||||||||||||    
T  12453234 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagacgtgtttggtaaa 12453320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 31642851 - 31642753
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    ||||||||||||||| || |||||||||| ||||||||| ||  | ||| |||||||||||||||||||  ||  |||||||||||||||  |||||||    
T  31642851 ggttgtgtttggtaacacgaataagctagcttatagcttgttggactagattataagcttgttttgatacaataagatgtgtttggtaaaaagcttttt 31642753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 372
Target Start/End: Original strand, 3512467 - 3512530
Alignment:
Q  309 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    |||||||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||||||    
T  3512467 aggttgtgtttggtaacacaaaaaagctagcttatagcttcttggattagcttataagcttgtt 3512530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 43129590 - 43129676
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| || |||||||||||||||||||| ||  | |||||||||| ||||||||||||  ||  |||||||| ||||||    
T  43129590 tgtgtttggtaacacgaataagctagtttatagcttgttggactagcttataaccttgttttgatataataagatgtgttcggtaaa 43129676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 366
Target Start/End: Complemental strand, 35160373 - 35160316
Alignment:
Q  309 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataag 366  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||  |||||||||||||    
T  35160373 aggttgtgtttggtaacacaaaaaagctagcttatagcttattggattagcttataag 35160316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 372
Target Start/End: Original strand, 5838256 - 5838315
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    |||||||||||||||||| ||||||  ||||||||| ||  |||||||||||||||||||    
T  5838256 tgtgtttggtaatacaaaaaagctaacttatagcttgttggattagcttataagcttgtt 5838315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 399
Target Start/End: Original strand, 34617705 - 34617748
Alignment:
Q  356 tagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  34617705 tagcttataagcttgttttgatagaatgagatgtgtttggtaaa 34617748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 399
Target Start/End: Complemental strand, 38364571 - 38364484
Alignment:
Q  312 ttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||||| || ||||| |||| ||||||||| ||  | ||| |||||||||||||||||||  ||  |||||||||||||||    
T  38364571 ttgtgtttggtaacacgaataaactagcttatagcttgttggactagtttataagcttgttttgatataataagatgtgtttggtaaa 38364484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 399
Target Start/End: Original strand, 40532053 - 40532143
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||| |||||||||||| ||||| ||||||| |||||| |||||  | || ||||||||||||||||||||  ||| |||||||| ||||||    
T  40532053 taggctgtgtttggtaacacaaa-aagctagcttatagtttattggactaacttataagcttgttttgataaaatgagatgtgttcggtaaa 40532143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 399
Target Start/End: Complemental strand, 45237068 - 45236977
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||||| ||| ||||| ||||||| ||||| ||| || || ||||||||| | |||||||||||| ||| ||  |||||||||||    
T  45237068 taggttgtgtttgataacacaaaaaagctagcttataactttttgtactagcttataggtttgttttgatagaatgagacatgtttggtaaa 45236977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 399
Target Start/End: Original strand, 25133258 - 25133296
Alignment:
Q  361 tataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  25133258 tataagcttgttttgatagaatgtgatgtgtttggtaaa 25133296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 399
Target Start/End: Complemental strand, 29051268 - 29051186
Alignment:
Q  317 tttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||| ||| |||| |||| |||||| || ||  | || || |||||||||||||||||| |||||||||||||||||||    
T  29051268 tttggtaacacagataaactagcttatagtttgttggactaactcataagcttgttttgatagaatgtgatgtgtttggtaaa 29051186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 35019487 - 35019573
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||| | ||| ||||||||| ||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  35019487 tgtgttagataacacaaataagatagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 35019573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 29725741 - 29725806
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 378  Q
    ||||||| |||||||  ||||||||| ||||||||| ||  | |||||||||||||||||||||||    
T  29725741 tgtgtttcgtaatacggataagctagcttatagcttgttggactagcttataagcttgttttgata 29725806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 372
Target Start/End: Complemental strand, 2773687 - 2773623
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||    
T  2773687 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgtt 2773623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 20697610 - 20697550
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| |||||||||||||||||| ||| ||| ||||||||| ||  |||||||||||||||    
T  20697610 taggctgtgtttggtaatacaaaaaagttagcttatagcttgttggattagcttataagct 20697550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 35057405 - 35057345
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    ||||||||||||||||| | ||||||| ||| ||||||||| ||  |||||||||||||||    
T  35057405 taggttgtgtttggtaacataaataagatagcttatagcttgttagattagcttataagct 35057345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 43800873 - 43800813
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  43800873 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 43800813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 368
Target Start/End: Original strand, 22215107 - 22215166
Alignment:
Q  309 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||||||| ||||| ||| ||| ||||||||| ||  |||||||||||||||    
T  22215107 aggttgtgtttggtaacacaaaaaagttagcttatagcttgttggattagcttataagct 22215166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 368
Target Start/End: Original strand, 39733718 - 39733781
Alignment:
Q  305 acataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    ||||||| |||||||||||| ||||| ||||||| ||||| ||| ||  |||||||||||||||    
T  39733718 acataggctgtgtttggtaacacaaaaaagctagcttataccttgttggattagcttataagct 39733781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 372
Target Start/End: Original strand, 40529501 - 40529560
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    |||||||||||| ||||| ||||||| ||||||||| ||   ||||||||||||||||||    
T  40529501 tgtgtttggtaacacaaaaaagctagcttatagcttgtttgtttagcttataagcttgtt 40529560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 39104277 - 39104191
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||  ||||||| |||||  || ||  | ||||||||||||||||||| |||  ||| |||||||||||||||    
T  39104277 tgtgtttggtaacacaagaaagctagcttataatttgttggactagcttataagcttgtttttataaaatgagatgtgtttggtaaa 39104191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 398
Target Start/End: Original strand, 41356333 - 41356375
Alignment:
Q  356 tagcttataagcttgttttgataggatgtgatgtgtttggtaa 398  Q
    |||||||||||||||||||||||  ||| ||||||||||||||    
T  41356333 tagcttataagcttgttttgataaaatgagatgtgtttggtaa 41356375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 373
Target Start/End: Complemental strand, 53574 - 53509
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttt 373  Q
    |||| ||||||| |||| ||||||||||||| ||||||||| ||  |||| |||||||| ||||||    
T  53574 taggctgtgttttgtaacacaaataagctagcttatagctttttgaattaacttataagtttgttt 53509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 284818 - 284871
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataag 366  Q
    |||||||||||| ||||| ||| ||||||||||||| ||  |||||||||||||    
T  284818 tgtgtttggtaacacaaaaaagttagtttatagcttgttggattagcttataag 284871  T

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Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 631059 - 631006
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataag 366  Q
    |||||||||||| ||||| ||| ||||||||||||| ||  |||||||||||||    
T  631059 tgtgtttggtaacacaaaaaagttagtttatagcttgttggattagcttataag 631006  T

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Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 816871 - 816818
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataag 366  Q
    |||||||||||| ||||| ||| ||||||||||||| ||  |||||||||||||    
T  816871 tgtgtttggtaacacaaaaaagttagtttatagcttgttggattagcttataag 816818  T

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Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 16786636 - 16786571
Alignment:
Q  307 ataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    ||||| ||||||||| || ||||| ||||||  ||||||||| ||  |||||||||||||||||||    
T  16786636 ataggctgtgtttggcaacacaaaaaagctaacttatagcttcttggattagcttataagcttgtt 16786571  T

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Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 25099408 - 25099468
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| |||||||||||| ||||| ||||||| ||||| ||| ||  |||||||||||||||    
T  25099408 taggctgtgtttggtaacacaaaaaagctagcttataacttgttggattagcttataagct 25099468  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 368
Target Start/End: Complemental strand, 38747061 - 38747001
Alignment:
Q  309 aggttgtgtttggtaatacaaataa-gctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||||||| ||||| || ||||| ||||||||| ||  |||||||||||||||    
T  38747061 aggttgtgtttggtaacacaaaaaaagctagcttatagcttgttggattagcttataagct 38747001  T

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Target: chr3 (Bit Score: 54; Significance: 7e-22; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 314 - 399
Target Start/End: Original strand, 46114989 - 46115074
Alignment:
Q  314 gtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||| ||||||||||||| ||||||||| ||  |||||||||||||||||||||||||| || | ||||||||||||||    
T  46114989 gtgtttggtaacacaaataagctagcttatagcttgttggattagcttataagcttgttttgatagaatataatgtgtttggtaaa 46115074  T

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Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 309 - 399
Target Start/End: Complemental strand, 32111663 - 32111573
Alignment:
Q  309 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  32111663 aggttgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 32111573  T

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Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 43860723 - 43860821
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    |||||||||||||||||| |||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||  |||||||    
T  43860723 ggttgtgtttggtaatacgaataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaaaagcttttt 43860821  T

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Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 34785977 - 34785891
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||| ||||||||| ||||||||||||  | |||||||||||||||||||||||| ||  || ||||||||||||    
T  34785977 tgtgtttggtaacacacataagctagcttatagcttattggactagcttataagcttgttttgatagaataagacgtgtttggtaaa 34785891  T

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Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 399
Target Start/End: Complemental strand, 42167434 - 42167345
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||||||| || |||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  42167434 ggttgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 42167345  T

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Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 408
Target Start/End: Complemental strand, 39535045 - 39534945
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 407  Q
    |||| |||||||||||| | ||||||||||| || |||||||||  |  ||||||||||||| ||||||||| ||| |||||||||||||||  ||||||    
T  39535045 taggctgtgtttggtaacagaaataagctagcttgtagcttattggacaagcttataagctttttttgatagaatgagatgtgtttggtaaaaagctttt 39534946  T
Q  408 t 408  Q
    |    
T  39534945 t 39534945  T

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Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 378
Target Start/End: Original strand, 50935710 - 50935778
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 378  Q
    ||||||||||||||| || |||||||||| ||||||||||||  | |||||||||||||||||||||||    
T  50935710 ggttgtgtttggtaacacgaataagctagcttatagcttattggactagcttataagcttgttttgata 50935778  T

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Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 5505932 - 5506018
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||| ||| ||  | ||||||||||| |||||||||||| ||| |||||||||||||||    
T  5505932 tgtgtttggtaacacaaaaaagctagcttataacttgttggactagcttataagtttgttttgatagaatgagatgtgtttggtaaa 5506018  T

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Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 40374607 - 40374521
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||  ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  40374607 tgtgtttggtaacacaaaaaagctaacttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 40374521  T

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Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 399
Target Start/End: Complemental strand, 2229272 - 2229183
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||||||| || ||||| |||||||||||||||||  | || ||||||| |||||||||||| |||  | |||||||||||||    
T  2229272 ggttgtgtttggtaacacgaataatctagtttatagcttattggactatcttataaccttgttttgatatgataaggtgtgtttggtaaa 2229183  T

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Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 399
Target Start/End: Complemental strand, 40980245 - 40980153
Alignment:
Q  307 ataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||||||||| ||||| || |||| |||||| || ||  | |||||||||| ||||||||||||  ||| |||||||||||||||    
T  40980245 ataggttgtgtttggtaacacaaaaaaactagcttatagtttgttgaactagcttataaacttgttttgataaaatgagatgtgtttggtaaa 40980153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 7041730 - 7041816
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| |  |||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  7041730 tgtgtttggtaacaagaataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 7041816  T

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Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 12122980 - 12122894
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||  ||| ||| || ||||||||||||    
T  12122980 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgtttttgtagaatgagacgtgtttggtaaa 12122894  T

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Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 370
Target Start/End: Original strand, 12764666 - 12764728
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttg 370  Q
    |||| |||||||||||| ||||| ||||||||||||||||| ||  |||||||||||||||||    
T  12764666 taggctgtgtttggtaacacaaaaaagctagtttatagctttttggattagcttataagcttg 12764728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 399
Target Start/End: Original strand, 22978083 - 22978165
Alignment:
Q  317 tttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||| || |||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  22978083 tttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 22978165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 399
Target Start/End: Original strand, 36806926 - 36807008
Alignment:
Q  317 tttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||| ||||| |||||||||| |||||| ||  | |||||||||||||||||||||||  ||| |||||||||| ||||    
T  36806926 tttggtaacacaaaaaagctagtttttagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttgataaa 36807008  T

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Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 48071973 - 48072071
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    ||||||||||| ||| || ||||| |||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||  |||||||    
T  48071973 ggttgtgtttgttaacacgaataaactagcttatagcttgttggactagcttataagcttgttttgatacaataagatgtgtttggtaaaaagcttttt 48072071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 399
Target Start/End: Original strand, 39129371 - 39129460
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||||||| | ||| ||||||| ||||||||| ||  | || |||||||||| |||||||||| ||| ||| |||||||||||    
T  39129371 ggttgtgtttggtaacataaaaaagctagcttatagcttgttggactatcttataagctagttttgatagaatgagatatgtttggtaaa 39129460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 399
Target Start/End: Complemental strand, 36660233 - 36660149
Alignment:
Q  315 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||| ||||| ||||||| |||||| || ||  |||||||||||||||||||||||||  ||| ||  |||||||||||    
T  36660233 tgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataagcttgttttgataaaatgagacttgtttggtaaa 36660149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 399
Target Start/End: Original strand, 46668335 - 46668427
Alignment:
Q  307 ataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||| |||||||||||| | ||| ||||||| ||||||||| ||  | || ||||||||||||||||||||  ||  |||||||||||||||    
T  46668335 ataggctgtgtttggtaacataaaaaagctagcttatagcttgttggactaacttataagcttgttttgataaaataagatgtgtttggtaaa 46668427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 6586265 - 6586351
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| | ||| ||| |||||||||| || ||  | |||||||||||||||||||||||  |||  ||||||||||||||    
T  6586265 tgtgtttggtaacataaaaaagttagtttatagtttgttggactagcttataagcttgttttgataaaatgatatgtgtttggtaaa 6586351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 42877240 - 42877326
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| || |||||||||| ||||||||| ||  | |||||||||||| ||||||||||  ||  |||||||| ||||||    
T  42877240 tgtgtttggtaacacgaataagctagcttatagcttcttggactagcttataagcatgttttgatataataagatgtgttaggtaaa 42877326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 48747404 - 48747490
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||| ||| |||||| |||||  | |||||||||||||||||||  ||| ||| || ||||||||||||    
T  48747404 tgtgtttggtaacacaaaaaagttagcttatagtttattggactagcttataagcttgtttttgtagaatgagacgtgtttggtaaa 48747490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 32390215 - 32390127
Alignment:
Q  313 tgtgtttggtaa--tacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||||  || ||| ||| ||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  32390215 tgtgtttggtaacataaaaaaaagttagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 32390127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 368
Target Start/End: Complemental strand, 34436084 - 34436019
Alignment:
Q  303 acacataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| |||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  34436084 acacttagggtgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 34436019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 39129300 - 39129365
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 378  Q
    ||||| |||||| || ||||||||||| |||||||| ||  | |||||||||||||||||||||||    
T  39129300 tgtgtgtggtaacacgaataagctagtctatagcttgttggactagcttataagcttgttttgata 39129365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 41888809 - 41888874
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 378  Q
    |||||||||||| || |||||||||| |||||| || ||  | |||||||||||||||||||||||    
T  41888809 tgtgtttggtaacacgaataagctagcttatagtttgttggactagcttataagcttgttttgata 41888874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 19274725 - 19274785
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  19274725 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 19274785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 8321530 - 8321475
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  8321530 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 8321475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 9558959 - 9558904
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| | ||||||||||| ||||||||| ||  |||||||||||||||    
T  9558959 tgtgtttggtaacataaataagctagcttatagcttgttagattagcttataagct 9558904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 372
Target Start/End: Complemental strand, 32999756 - 32999697
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    |||||||| ||| ||||| ||||||| ||||||||| ||  |||||||||||||||||||    
T  32999756 tgtgtttgataacacaaaaaagctagcttatagcttcttggattagcttataagcttgtt 32999697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 41991783 - 41991728
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  41991783 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 41991728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 372
Target Start/End: Original strand, 51980732 - 51980791
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    |||||||||||| ||||| ||| ||||||||||||| ||  | |||||||||||||||||    
T  51980732 tgtgtttggtaacacaaaaaagttagtttatagcttgttggactagcttataagcttgtt 51980791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 41889520 - 41889434
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| || ||||| |||| ||||||||| ||  | ||| |||||||||||||||||||  ||  ||||| |||||||||    
T  41889520 tgtgtttggtaacacgaataaactagcttatagcttgttggactagtttataagcttgttttgatataataagatgtatttggtaaa 41889434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 4070816 - 4070869
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataag 366  Q
    |||||||||||| |||||||||||||||||||| || ||  | |||||||||||    
T  4070816 tgtgtttggtaacacaaataagctagtttatagtttgttgaactagcttataag 4070869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 399
Target Start/End: Complemental strand, 44896116 - 44896079
Alignment:
Q  362 ataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  44896116 ataagcttgttttgatagaatgagatgtgtttggtaaa 44896079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 348
Target Start/End: Original strand, 45355124 - 45355165
Alignment:
Q  307 ataggttgtgtttggtaatacaaataagctagtttatagctt 348  Q
    ||||| |||||||||||| ||||| |||||||||||||||||    
T  45355124 ataggctgtgtttggtaacacaaaaaagctagtttatagctt 45355165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 12055619 - 12055559
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| |||||||||||| ||||| ||||||| |||||| || ||  |||||||||||||||    
T  12055619 taggctgtgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataagct 12055559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 17666797 - 17666857
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| ||||||||||||  |||| ||||||| ||||||||||||  |||| ||||||||||    
T  17666797 taggctgtgtttggtaacccaaaaaagctagcttatagcttattggattaacttataagct 17666857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 309 - 399
Target Start/End: Original strand, 11575618 - 11575708
Alignment:
Q  309 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||||||| ||||| ||||||| ||||||||| ||  | ||||||||||| |||||||||||| ||| |||||||||||||||    
T  11575618 aggttgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagtttgttttgatagaatgagatgtgtttggtaaa 11575708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 35766553 - 35766618
Alignment:
Q  307 ataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    |||||||||||||| ||||||||| ||||||| ||||||||| ||  |||||||||||||||||||    
T  35766553 ataggttgtgtttgataatacaaaaaagctagcttatagcttcttggattagcttataagcttgtt 35766618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 399
Target Start/End: Original strand, 1923942 - 1924033
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | ||||||||||||||| |||||||  ||| || ||||||||||||    
T  1923942 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgctttgataaaatgagacgtgtttggtaaa 1924033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 399
Target Start/End: Complemental strand, 4559584 - 4559493
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||| |||||||||||| | ||| ||||||| ||||||||| ||  |  ||||||||||||||| ||||||| ||| |||||||||||||||    
T  4559584 taggctgtgtttggtaacataaaaaagctagcttatagcttgttggacaagcttataagcttgtcttgatagaatgagatgtgtttggtaaa 4559493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 3703454 - 3703508
Alignment:
Q  315 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagctt 369  Q
    |||||||||| | ||||||||||||||||||||| || |||||||||||||||||    
T  3703454 tgtttggtaacataaataagctagtttatagcttgttatattagcttataagctt 3703508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 8520567 - 8520653
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| | ||| |||||||  |||||||| ||  | ||||||||||||| |||||||||| ||| |||||||||||||||    
T  8520567 tgtgtttggtaacataaaaaagctagcatatagcttgttagactagcttataagctagttttgatagaatgagatgtgtttggtaaa 8520653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 13018994 - 13019080
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||| ||| ||  | ||||||||||| |||||||||||  ||| |||||||||||||||    
T  13018994 tgtgtttggtaacacaaaaaagctagcttataacttgttggactagcttataagtttgttttgataaaatgagatgtgtttggtaaa 13019080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 399
Target Start/End: Complemental strand, 20768971 - 20768881
Alignment:
Q  309 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||||| || ||||| ||| |||||||||| || ||  | || ||||||||||||||||||||  ||| |||||||||||||||    
T  20768971 aggttgtgtttggcaacacaaaaaagttagtttatagtttgttggactatcttataagcttgttttgataaaatgagatgtgtttggtaaa 20768881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 399
Target Start/End: Original strand, 15524359 - 15524448
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||| |||| || |||||||||| ||||||||| ||  | |||||||||| ||||||||||||  ||  |||||||||||||||    
T  15524359 ggttgtgtttcgtaacacgaataagctagcttatagcttgttagactagcttataaccttgttttgatataataagatgtgtttggtaaa 15524448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 399
Target Start/End: Complemental strand, 20017408 - 20017319
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||| ||||| ||| ||||| || |||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  20017408 ggttgcgtttgataacacaaaaaaactagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 20017319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 368
Target Start/End: Complemental strand, 34590032 - 34589970
Alignment:
Q  306 cataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  34590032 cataggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 34589970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 368
Target Start/End: Complemental strand, 37530851 - 37530789
Alignment:
Q  306 cataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  37530851 cataggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 37530789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 310 - 379
Target Start/End: Original strand, 3033390 - 3033459
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgatag 379  Q
    ||||||||||||||| | ||| ||||||| ||||||||| ||  | ||||||||||||| ||||||||||    
T  3033390 ggttgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagctagttttgatag 3033459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 8520497 - 8520562
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 378  Q
    |||||||||||| || |||||||||  ||||||||| ||  | |||||||||||||||||||||||    
T  8520497 tgtgtttggtaacacgaataagctaacttatagcttgttggactagcttataagcttgttttgata 8520562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 5050201 - 5050146
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| | ||||||||||| ||||||||| ||  |||||||||||||||    
T  5050201 tgtgtttggtaacataaataagctagcttatagcttgttggattagcttataagct 5050146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 6789713 - 6789658
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  6789713 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 6789658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 7615101 - 7615046
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||||||||| ||||||  ||||||||| ||  |||||||||||||||    
T  7615101 tgtgtttggtaatacaaaaaagctaccttatagcttgttggattagcttataagct 7615046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 399
Target Start/End: Complemental strand, 7948494 - 7948451
Alignment:
Q  356 tagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||||||||||||||  ||| |||||||||||||||    
T  7948494 tagcttataagcttgttttgataaaatgagatgtgtttggtaaa 7948451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Original strand, 15498645 - 15498700
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  15498645 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 15498700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Original strand, 24171365 - 24171420
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  24171365 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 24171420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 372
Target Start/End: Complemental strand, 26286240 - 26286177
Alignment:
Q  309 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    ||||||||||||||||| | |||||||||  ||||||||||||  ||||  |||||||||||||    
T  26286240 aggttgtgtttggtaatgccaataagctaccttatagcttattggattaagttataagcttgtt 26286177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 29525420 - 29525365
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  29525420 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 29525365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 41734368 - 41734313
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  41734368 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 41734313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Original strand, 42422807 - 42422862
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||||||||||||| ||  |||| ||||||||||    
T  42422807 tgtgtttggtaacacaaaaaagctagtttatagcttgttgaattaacttataagct 42422862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Original strand, 42709311 - 42709366
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  42709311 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 42709366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 368
Target Start/End: Original strand, 76411 - 76469
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    ||||||||||| ||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  76411 ggttgtgtttgataacacaaaaaagctagcttatagctttttggattagcttataagct 76469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 3078640 - 3078554
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||| ||| ||||| ||| ||  | |||||||||| ||||||||||||  ||| || ||||||||||||    
T  3078640 tgtgtttggtaacacaaaaaagttagcttataacttgttggactagcttataaacttgttttgataaaatgagacgtgtttggtaaa 3078554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 368
Target Start/End: Original strand, 25881504 - 25881562
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    ||||||||||||||| | ||||| ||||| ||||||||| ||  |||||||||||||||    
T  25881504 ggttgtgtttggtaacataaataggctagcttatagcttgttagattagcttataagct 25881562  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 378
Target Start/End: Original strand, 3033335 - 3033384
Alignment:
Q  329 aataagctagtttatagcttattctattagcttataagcttgttttgata 378  Q
    |||||||||| ||||||||| ||  | |||||||||||||||||||||||    
T  3033335 aataagctagcttatagcttgttagactagcttataagcttgttttgata 3033384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 16218405 - 16218352
Alignment:
Q  315 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  16218405 tgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 16218352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 17645306 - 17645359
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataag 366  Q
    |||||||||||| | ||||||||||| ||||||||| ||  |||||||||||||    
T  17645306 tgtgtttggtaacataaataagctagcttatagcttgttagattagcttataag 17645359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 365
Target Start/End: Original strand, 23590634 - 23590691
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataa 365  Q
    ||||||||||||||||| ||||| ||| ||||||||| ||| ||  ||||||||||||    
T  23590634 taggttgtgtttggtaacacaaaaaagatagtttataacttgttggattagcttataa 23590691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 372
Target Start/End: Complemental strand, 36944344 - 36944280
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    ||||||||||||||||| | ||| ||||||| ||||||||| ||  | || ||||||||||||||    
T  36944344 taggttgtgtttggtaacataaaaaagctagcttatagcttgttagactaacttataagcttgtt 36944280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 36959461 - 36959501
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagctt 348  Q
    ||||||||||||||||| ||||| ||||||| |||||||||    
T  36959461 taggttgtgtttggtaacacaaaaaagctagcttatagctt 36959501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 41356263 - 41356307
Alignment:
Q  355 ttagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||| |||||||||||||||||||| ||| |||||||||| ||||    
T  41356263 ttagtttataagcttgttttgatagaatgggatgtgtttgataaa 41356307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 4e-20; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 48369068 - 48368982
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||| |||||| |||||||||||||| |||||||| ||  | ||||||||||| |||||||||||| |||||||||||||||||||    
T  48369068 tgtgtctggtaacacaaataagctagtgtatagcttgttggactagcttataagattgttttgatagaatgtgatgtgtttggtaaa 48368982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 308 - 399
Target Start/End: Original strand, 19912668 - 19912759
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  19912668 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 19912759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 312 - 399
Target Start/End: Original strand, 51924025 - 51924112
Alignment:
Q  312 ttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||||| ||||| || |||||||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  51924025 ttgtgtttggtaacacaaaaaaactagtttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 51924112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 308 - 399
Target Start/End: Original strand, 55610658 - 55610749
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||| |||||||||||| ||||| || |||| ||||||||| || || |||||||||||||||||||||||  ||| |||||||||||||||    
T  55610658 taggctgtgtttggtaacacaaaaaaactagcttatagcttgttgtactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 55610749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 30411351 - 30411265
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  30411351 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 30411265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 50792515 - 50792429
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| || |||||||||||||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  50792515 tgtgtttggtaacacgaataagctagtttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 50792429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 30653499 - 30653584
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||||| ||||||| ||  |||||||||||||||||||||||||  ||| || ||||||||||||    
T  30653499 tgtgtttggtaacacaaaaaagctagtt-atagcttgttggattagcttataagcttgttttgataaaatgagacgtgtttggtaaa 30653584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 19869960 - 19870025
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 378  Q
    |||||||||||| || |||||||||| ||||||||||||  | |||||||||||||||||||||||    
T  19869960 tgtgtttggtaacacgaataagctagcttatagcttattgaactagcttataagcttgttttgata 19870025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 399
Target Start/End: Original strand, 48953027 - 48953116
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||||||| ||  ||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  48953027 ggttgtgtttggtaacacggataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 48953116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 408
Target Start/End: Complemental strand, 10658982 - 10658887
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    |||||||||||| || ||| |||||| ||||||||||||  | |||||||||||||||||||||||  ||  |||| ||||||||||  |||||||    
T  10658982 tgtgtttggtaacacgaattagctagcttatagcttattggactagcttataagcttgttttgatataataagatgcgtttggtaaaaagcttttt 10658887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 408
Target Start/End: Complemental strand, 10873127 - 10873032
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    |||||||||||| || ||| |||||| ||||||||||||  | |||||||||||||||||||||||  ||  |||| ||||||||||  |||||||    
T  10873127 tgtgtttggtaacacgaattagctagcttatagcttattggactagcttataagcttgttttgatataataagatgcgtttggtaaaaagcttttt 10873032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 408
Target Start/End: Original strand, 43590534 - 43590629
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    |||||||||||| || |||||||||| ||||||||| ||  | ||||||||||| |||||||||||  ||  |||||||||||||||  |||||||    
T  43590534 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagtttgttttgatataataagatgtgtttggtaaaaagcttttt 43590629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 202290 - 202376
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  ||||||||||||||||| |||||||  ||  || ||||||||||||    
T  202290 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagcttgctttgataaaataagacgtgtttggtaaa 202376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 26923638 - 26923552
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| | ||| ||||||| ||||| ||| ||  | ||||||||||||| |||||||||| ||| |||||||||||||||    
T  26923638 tgtgtttggtaacataaaaaagctagcttataacttgttaaactagcttataagctagttttgatagaatgagatgtgtttggtaaa 26923552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 399
Target Start/End: Original strand, 28459608 - 28459698
Alignment:
Q  309 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||||| || ||||| ||| |||||||||| || ||  | || ||||||||||||||||||||  ||| |||||||||||||||    
T  28459608 aggttgtgtttggcaacacaaaaaagttagtttatagtttgttggactatcttataagcttgttttgataaaatgagatgtgtttggtaaa 28459698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 45549653 - 45549739
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||||||| ||    |||||||||||||||||||||||  |||  ||||||||||||||    
T  45549653 tgtgtttggtaacacaaaaaagctagcttatagcttgttgggctagcttataagcttgttttgataaaatgaaatgtgtttggtaaa 45549739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 39840299 - 39840239
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    ||||||||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  39840299 taggttgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 39840239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 399
Target Start/End: Complemental strand, 2390374 - 2390283
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | || |||||||| ||||||||| || ||| || ||||||||||||    
T  2390374 taggctgtgtttggtaacacaaaaaagctagcttatagcttcttggactaacttataagtttgttttgaaagaatgagacgtgtttggtaaa 2390283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 400
Target Start/End: Complemental strand, 19871072 - 19870985
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaag 400  Q
    |||||||||||| || |||||||||| |||||||||  |  | |||||||||| ||||||||||||  ||  ||||||||||||||||    
T  19871072 tgtgtttggtaacacgaataagctagcttatagcttgctggactagcttataaccttgttttgatataataagatgtgtttggtaaag 19870985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 399
Target Start/End: Original strand, 31997875 - 31997918
Alignment:
Q  356 tagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||||||||||||||| |||||||||||||| ||||    
T  31997875 tagcttataagcttgttttgatagaatgtgatgtgtttgataaa 31997918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 27531830 - 27531916
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||||| ||||  ||||||||| ||  | ||| |||||||||||||||||||| ||  |||||| ||||||||    
T  27531830 tgtgtttggtaacacaaataggctaacttatagcttgttggactagtttataagcttgttttgatagaatacgatgtgattggtaaa 27531916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 368
Target Start/End: Complemental strand, 19801968 - 19801907
Alignment:
Q  307 ataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    ||||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  19801968 ataggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 19801907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 398
Target Start/End: Original strand, 20986274 - 20986359
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaa 398  Q
    |||||||||||| | ||||||||||  ||||||||| ||  | || ||||||| ||||||||||||  ||| ||||||||||||||    
T  20986274 tgtgtttggtaacataaataagctaacttatagcttgttggactaacttataaacttgttttgataaaatgagatgtgtttggtaa 20986359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 396
Target Start/End: Original strand, 50790826 - 50790907
Alignment:
Q  315 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggt 396  Q
    |||||||||| || |||||||||| ||||| ||| ||  | |||||||||||||||||||||||  ||  ||||||||||||    
T  50790826 tgtttggtaacacgaataagctagcttataacttgttggactagcttataagcttgttttgatataataagatgtgtttggt 50790907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 399
Target Start/End: Complemental strand, 1771937 - 1771853
Alignment:
Q  315 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||| ||| ||||| ||| ||| ||||||||| ||  | ||||||||||||||| |||||||  ||| |||||||||||||||    
T  1771937 tgtttgataacacaaaaaagatagcttatagcttgttggactagcttataagcttgctttgataaaatgagatgtgtttggtaaa 1771853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 24152671 - 24152711
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagctt 348  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  24152671 taggttgtgtttggtaacacaaataagctagcttatagctt 24152711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 372
Target Start/End: Original strand, 25686981 - 25687045
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    |||| |||||||||||| ||||| |||||| ||||||| || ||  |||||||||||||||||||    
T  25686981 taggctgtgtttggtaacacaaaaaagctaatttatagttttttggattagcttataagcttgtt 25687045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 344
Target Start/End: Complemental strand, 30996746 - 30996710
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttata 344  Q
    ||||||||||||||||| |||||||||||||||||||    
T  30996746 taggttgtgtttggtaacacaaataagctagtttata 30996710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Original strand, 6238188 - 6238243
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  6238188 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 6238243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Original strand, 33984088 - 33984143
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  33984088 tgtgtttggtaacacaaaaaagctagcttatagcttgttgaattagcttataagct 33984143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 378
Target Start/End: Original strand, 49646027 - 49646090
Alignment:
Q  315 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 378  Q
    |||||||||| || |||||| ||| ||||||| | ||  |||||||||||||||||||||||||    
T  49646027 tgtttggtaacacgaataagttagcttatagcctgttggattagcttataagcttgttttgata 49646090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Original strand, 53284007 - 53284062
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  53284007 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 53284062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 371
Target Start/End: Complemental strand, 14269922 - 14269864
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgt 371  Q
    |||||||||||| || |||||||||| ||||||||| ||  | ||||||||||||||||    
T  14269922 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgt 14269864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 368
Target Start/End: Complemental strand, 37114532 - 37114478
Alignment:
Q  314 gtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    ||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  37114532 gtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 37114478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 394
Target Start/End: Original strand, 45618060 - 45618142
Alignment:
Q  312 ttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttg 394  Q
    ||||||||||||| | ||||||||||| |||| | || ||  | ||||||||||| ||||||| |||| ||| ||||||||||    
T  45618060 ttgtgtttggtaacataaataagctagcttatggtttgttagactagcttataagtttgttttaatagaatgcgatgtgtttg 45618142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 377
Target Start/End: Original strand, 55660548 - 55660610
Alignment:
Q  315 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgat 377  Q
    |||||||||| | ||||||||||| ||||||||| ||  | |||||||||| |||||||||||    
T  55660548 tgtttggtaacataaataagctagcttatagcttgttggactagcttataaacttgttttgat 55660610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 7113614 - 7113524
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttata----agcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| | ||| ||||||| ||||||||| ||  | |||||||||    |||| |||||||||| ||| |||||||||||||||    
T  7113614 tgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagctagctagttttgatagaatgagatgtgtttggtaaa 7113524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 28778556 - 28778609
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataag 366  Q
    |||||||||||| | ||||||||||||||||||||| ||  |||| ||||||||    
T  28778556 tgtgtttggtaacataaataagctagtttatagcttgttagattaacttataag 28778609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 49335290 - 49335237
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataag 366  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||    
T  49335290 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataag 49335237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 373
Target Start/End: Complemental strand, 49648916 - 49648859
Alignment:
Q  316 gtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttt 373  Q
    ||||||||| || |||||||||| ||||||||| ||  | ||||||||||||||||||    
T  49648916 gtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttt 49648859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 344
Target Start/End: Complemental strand, 318776 - 318740
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttata 344  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  318776 taggttgtgtttggtaacacaaataagctagcttata 318740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 372
Target Start/End: Complemental strand, 30653395 - 30653331
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    ||||||||||||||||| ||||| ||| ||| |||| |||| ||  | |||||||||||||||||    
T  30653395 taggttgtgtttggtaacacaaaaaagttagcttatggcttgttggactagcttataagcttgtt 30653331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 38005551 - 38005631
Alignment:
Q  319 tggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||| | ||| ||| ||| ||||||||| ||  | ||| ||||||| |||||||||||| ||| |||||||||||||||    
T  38005551 tggtaacataaaaaagttagcttatagcttgttggactagtttataagtttgttttgatagaatgagatgtgtttggtaaa 38005631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 45561419 - 45561360
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  45561419 taggctgtgtttggtaacacaaa-aagctagcttatagcttgttggattagcttataagct 45561360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 7e-19; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 307 - 399
Target Start/End: Complemental strand, 40862308 - 40862217
Alignment:
Q  307 ataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||| |||||||||||| ||||| ||||||||||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  40862308 ataggctgtgtttggtaacacaaa-aagctagtttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 40862217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 314 - 399
Target Start/End: Complemental strand, 18109813 - 18109728
Alignment:
Q  314 gtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  18109813 gtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 18109728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 399
Target Start/End: Complemental strand, 38928592 - 38928503
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||||||| | ||| ||||||| ||||||||| ||  | ||||||||||||| |||||||||| ||| |||||||||||||||    
T  38928592 ggttgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagctagttttgatagaatgagatgtgtttggtaaa 38928503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 33178961 - 33179047
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| || |||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  33178961 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 33179047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 1086038 - 1086127
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggta 397  Q
    |||| |||||||||||| ||||||||||||| ||||||||| ||  | || ||||||||||||||||||||  ||  |||||||||||||    
T  1086038 taggctgtgtttggtaacacaaataagctagcttatagcttgttaaactaacttataagcttgttttgataaaataagatgtgtttggta 1086127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 395
Target Start/End: Complemental strand, 8341264 - 8341172
Alignment:
Q  303 acacataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttgg 395  Q
    |||| |||| |||||||||||| ||||||||||||| ||||| ||| ||  | ||||||||||||||  |||||||| ||| |||||||||||    
T  8341264 acacgtaggctgtgtttggtaacacaaataagctagcttataacttgttggactagcttataagcttactttgatagaatgagatgtgtttgg 8341172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 408
Target Start/End: Original strand, 37240949 - 37241044
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    |||||| ||||||||||||||||||| ||||| ||| ||  | ||||||||||| |||||||||||| ||  |||||||||| ||||  |||||||    
T  37240949 tgtgttcggtaatacaaataagctagcttataacttgttagactagcttataagtttgttttgatagaataagatgtgtttgctaaaaagcttttt 37241044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 11447237 - 11447335
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    |||||||||| |||| ||||||||||||| |||||||||  |  | |||||||||| ||||||||||||| ||  ||||||||| |||||  |||||||    
T  11447237 ggttgtgtttagtaacacaaataagctagcttatagcttgctggactagcttataaccttgttttgatagaatacgatgtgtttagtaaaaagcttttt 11447335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 14452300 - 14452386
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| || ||| |||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  14452300 tgtgtttggtaacacgaattagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 14452386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 399
Target Start/End: Complemental strand, 6322242 - 6322153
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||||||| || |||||||||| ||||||||| ||  | ||||||| || ||||||||||||  ||  |||||||||||||||    
T  6322242 ggttgtgtttggtaacacgaataagctagcttatagcttgttggactagcttagaaacttgttttgatataataagatgtgtttggtaaa 6322153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 372
Target Start/End: Original strand, 5774096 - 5774152
Alignment:
Q  316 gtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    ||||| ||||||||| ||||||||||||||||| ||  |||||||||||||||||||    
T  5774096 gtttgataatacaaaaaagctagtttatagcttgttggattagcttataagcttgtt 5774152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 399
Target Start/End: Complemental strand, 15265438 - 15265354
Alignment:
Q  315 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||| ||||||||| ||| ||||||||| ||    ||||||||||||||||||| |||| ||| || ||||||||||||    
T  15265438 tgtttggtaacacaaataagttagcttatagcttcttgggctagcttataagcttgttttaatagaatgagacgtgtttggtaaa 15265354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 399
Target Start/End: Complemental strand, 28125091 - 28125019
Alignment:
Q  327 caaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||||||| ||  | ||||||||||| ||||||| |||| |||| ||||||||||||||    
T  28125091 caaataagctagcttatagcttgttggactagcttataagtttgttttaatagaatgtcatgtgtttggtaaa 28125019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 408
Target Start/End: Original strand, 36600937 - 36601032
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    |||||||| ||| || |||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||   ||||||||||||||  |||||||    
T  36600937 tgtgtttgataacacgaataagctagcttatagcttgttggactagcttataagcttgttttgatataataaaatgtgtttggtaaaaagcttttt 36601032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 399
Target Start/End: Original strand, 39532057 - 39532148
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||| ||||||||||| ||||| ||  ||| ||||||||| ||  | ||||||||||| |||||||||||  ||| |||||||||||||||    
T  39532057 taggtcgtgtttggtaacacaaaaaaattagcttatagcttgttggactagcttataagtttgttttgataaaatgagatgtgtttggtaaa 39532148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 368
Target Start/End: Original strand, 42519710 - 42519769
Alignment:
Q  309 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  42519710 aggttgtgtttggtaacacaaaaaagctagcttatagcttgttgcattagcttataagct 42519769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 408
Target Start/End: Complemental strand, 44526086 - 44525991
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    |||||||||||| | ||||||||||| || |||||| ||  |  ||||||||| ||||||||||||| |||  ||||||||||||||  |||||||    
T  44526086 tgtgtttggtaacataaataagctagcttttagcttgttggacaagcttataaacttgttttgatagaatgaaatgtgtttggtaaaaagcttttt 44525991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 368
Target Start/End: Original strand, 45376909 - 45376964
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||||||||||||||||||||| ||  | |||||||||||||    
T  45376909 tgtgtttggtaacacaaataagctagtttatagcttgttggactagcttataagct 45376964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 399
Target Start/End: Complemental strand, 7183389 - 7183295
Alignment:
Q  305 acataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||| |||||||||||| ||||| ||||||| |||||| || ||  | ||| |||||||||||||||||||  ||   ||||||||||||||    
T  7183389 acataggctgtgtttggtaacacaaaaaagctagcttatagtttgttggactagtttataagcttgttttgataaaataaaatgtgtttggtaaa 7183295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 26340133 - 26340047
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||  ||||| ||| ||  | |||||||||||||||||||||||  ||| ||| |||||||||||    
T  26340133 tgtgtttggtaacacaaaaaagctaacttataacttgttggactagcttataagcttgttttgataaaatgagatatgtttggtaaa 26340047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 399
Target Start/End: Complemental strand, 38245998 - 38245913
Alignment:
Q  314 gtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||| | ||| ||||||| |||||| |||||  | || |||||||||||||||||| || ||| || ||||||||||||    
T  38245998 gtgtttggtaacataaaaaagctagcttatagtttattggactaacttataagcttgttttgaaagaatgcgacgtgtttggtaaa 38245913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 12161018 - 12160958
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  12161018 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 12160958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 372
Target Start/End: Original strand, 35422038 - 35422102
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    |||||||||||| |||| ||||| |||||||||||||| || ||  |||||||||||| ||||||    
T  35422038 taggttgtgtttagtaacacaaaaaagctagtttatagttttttggattagcttataaacttgtt 35422102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 42098011 - 42097955
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagctt 369  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  ||||||||||||||||    
T  42098011 tgtgtttggtaacacaaaaaagctagcttatagcttcttggattagcttataagctt 42097955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 368
Target Start/End: Original strand, 43496161 - 43496217
Alignment:
Q  312 ttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    ||||||||||||| | ||||||||||| ||||||||| ||  |||||||||||||||    
T  43496161 ttgtgtttggtaacataaataagctagcttatagcttgttgcattagcttataagct 43496217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 10247482 - 10247398
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||| ||| |||||| || ||  | |||||||||||||||||||||||  |  ||||||||||||||||    
T  10247482 tgtgtttggtaacacaaaaaagttagcttatagtttgttggactagcttataagcttgttttgata--aaatgatgtgtttggtaaa 10247398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 11018131 - 11018076
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  11018131 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 11018076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Original strand, 14958120 - 14958175
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||||||||| |||||| |||||||||| ||  ||||| |||||||||    
T  14958120 tgtgtttggtaatacaaagaagctaatttatagcttgttggattagtttataagct 14958175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Original strand, 30523609 - 30523664
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  30523609 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 30523664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 39241260 - 39241205
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  39241260 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 39241205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 6319537 - 6319602
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 378  Q
    |||||||||||| |  |||||||||| ||| ||||| ||  | |||||||||||||||||||||||    
T  6319537 tgtgtttggtaacaagaataagctagcttacagcttgttggactagcttataagcttgttttgata 6319602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 24520317 - 24520264
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataag 366  Q
    |||||||||||| || |||||||||| ||||||||| ||  |||||||||||||    
T  24520317 tgtgtttggtaacacgaataagctagcttatagcttgttggattagcttataag 24520264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 10361388 - 10361448
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||    
T  10361388 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 10361448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 16496720 - 16496660
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  ||||| |||||||||    
T  16496720 taggatgtgtttggtaacacaaaaaagctagcttatagcttgttggattagtttataagct 16496660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 34245241 - 34245301
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| |||||||||||| | ||| ||||||| ||||||||| ||  |||||||||||||||    
T  34245241 taggctgtgtttggtaacataaaaaagctagcttatagcttgttggattagcttataagct 34245301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 378
Target Start/End: Complemental strand, 38928666 - 38928598
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 378  Q
    ||||||||||||||| |  |||||||||| |||||| || ||  | |||||||||||||||||| ||||    
T  38928666 ggttgtgtttggtaacatgaataagctagcttatagtttgttggactagcttataagcttgtttagata 38928598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 7e-19; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 315 - 399
Target Start/End: Complemental strand, 42628315 - 42628231
Alignment:
Q  315 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||||||| ||||||||||||||||| ||  | ||||||||||||||| |||||||  ||| |||||||||||||||    
T  42628315 tgtttggtaatacaaaaaagctagtttatagcttgttggactagcttataagcttgctttgataaaatgagatgtgtttggtaaa 42628231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 308 - 399
Target Start/End: Original strand, 44502556 - 44502647
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||||||||| | ||| ||||||| ||||||||||||  |||  ||||||||||||||||||||| ||  |||||||||||||||    
T  44502556 taggttgtgtttggtaacataaaaaagctagcttatagcttattggattgacttataagcttgttttgatagaataagatgtgtttggtaaa 44502647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 3796063 - 3795977
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  3796063 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 3795977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 31656369 - 31656455
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||||||||||||| ||  | ||||||| |||||||||||||||  ||| |||||||||||||||    
T  31656369 tgtgtttggtaacacaaaaaagctagtttatagcttgttggactagcttacaagcttgttttgataaaatgagatgtgtttggtaaa 31656455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 308 - 399
Target Start/End: Original strand, 14390417 - 14390508
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  |||  ||||||||||||||    
T  14390417 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgaaatgtgtttggtaaa 14390508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 5698126 - 5698212
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||| ||||    
T  5698126 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttgataaa 5698212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 27667675 - 27667761
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| |||||  || ||||||||||||||||  | ||||||||||| |||||||||||  ||| |||||||||||||||    
T  27667675 tgtgtttggtaacacaaaatagttagtttatagcttattgaactagcttataagtttgttttgataaaatgagatgtgtttggtaaa 27667761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 31496610 - 31496696
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||| ||||||||| ||||||||| ||  | |||||||||| |||||||| |||| ||| |||||||||||||||    
T  31496610 tgtgtttggtaacacagataagctagcttatagcttcttggactagcttataaacttgttttaatagaatgagatgtgtttggtaaa 31496696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 399
Target Start/End: Complemental strand, 4361157 - 4361073
Alignment:
Q  315 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||| ||||| ||| ||| |||||| |||||  | ||||||||||||||||||| |||| ||| |||||||||||||||    
T  4361157 tgtttggtaacacaaaaaagttagcttatagtttattggactagcttataagcttgttttaatagaatgagatgtgtttggtaaa 4361073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 310 - 378
Target Start/End: Complemental strand, 4640195 - 4640127
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 378  Q
    ||||||||||||||| || |||||||||| ||||||||| ||  | |||||||||||||||||||||||    
T  4640195 ggttgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttttgata 4640127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 368
Target Start/End: Original strand, 11823580 - 11823639
Alignment:
Q  309 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||||||| ||||| ||||||||||||||||| ||  |||||||||||||||    
T  11823580 aggttgtgtttggtaacacaaaaaagctagtttatagcttgttggattagcttataagct 11823639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 408
Target Start/End: Complemental strand, 44300039 - 44299948
Alignment:
Q  317 tttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    |||||||| || |||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||  |||||||    
T  44300039 tttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaaaagcttttt 44299948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 44110031 - 44109945
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||| | ||| ||||||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  44110031 tgtgttagataacacaaataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 44109945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 399
Target Start/End: Original strand, 35179814 - 35179906
Alignment:
Q  307 ataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||| |||||||||||| | ||| ||||||| ||||||||| ||  | ||||||||||| |||||||||||  ||| |||||||||| ||||    
T  35179814 ataggctgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagtttgttttgataaaatgagatgtgtttgataaa 35179906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 399
Target Start/End: Original strand, 9223835 - 9223926
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||| |||||||||||| ||||| ||||||  ||||||||| ||  | || ||||||||||||||||||||  ||  |||||||||||||||    
T  9223835 taggctgtgtttggtaacacaaaaaagctaacttatagcttgttggactaacttataagcttgttttgataaaataagatgtgtttggtaaa 9223926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 372
Target Start/End: Original strand, 41865287 - 41865346
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||||||    
T  41865287 tgtgtttggtaacacaaaaaagctagcttatagcttcttggattagcttataagcttgtt 41865346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 38667187 - 38667277
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagct----tattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||| ||||||||||||    | ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  38667187 tgtgtttggtaacacaaaaaagttagtttatagctagtttgttgaactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 38667277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 399
Target Start/End: Complemental strand, 39325603 - 39325530
Alignment:
Q  326 acaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| || ||||||||||||    
T  39325603 acaaaaaagctagcttatagcttgttgaactagcttataagcttgttttgataaaatgagacgtgtttggtaaa 39325530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 2459745 - 2459689
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagctt 369  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  ||||||||||||||||    
T  2459745 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctt 2459689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 397
Target Start/End: Original strand, 23259085 - 23259169
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggta 397  Q
    |||||||||||| || |||||| ||| ||||||||| ||  | ||||||||||| |||||||||||  ||  |||||||||||||    
T  23259085 tgtgtttggtaacacgaataagttagcttatagcttgttggactagcttataagtttgttttgatataataagatgtgtttggta 23259169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 27747602 - 27747662
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  27747602 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 27747662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 1190242 - 1190187
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||||||||| ||| ||  |||||||||||||||    
T  1190242 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 1190187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 399
Target Start/End: Complemental strand, 18545653 - 18545610
Alignment:
Q  356 tagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||||||||||||||  ||| |||||||||||||||    
T  18545653 tagcttataagcttgttttgataaaatgagatgtgtttggtaaa 18545610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Original strand, 30358074 - 30358129
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  30358074 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 30358129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Original strand, 39325611 - 39325666
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  39325611 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 39325666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 408
Target Start/End: Complemental strand, 43847528 - 43847433
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    |||||||||||| || |||||||||| |||||| || |   | ||||||||||||| |||||||||  ||  |||||||||||||||  |||||||    
T  43847528 tgtgtttggtaacacgaataagctagcttatagtttgtcggactagcttataagctagttttgatataataagatgtgtttggtaaaaagcttttt 43847433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Original strand, 45900169 - 45900224
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||| | ||||||||||||||||| ||  |||||||||||||||    
T  45900169 tgtgtttggtaacacagaaaagctagtttatagcttgttggattagcttataagct 45900224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 50586278 - 50586223
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  50586278 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 50586223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 5698508 - 5698593
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | || |||||||||||| |||||||  ||| |||||||||| ||||    
T  5698508 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactaacttataagcttg-tttgataaaatgagatgtgtttgataaa 5698593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 11756971 - 11756885
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| || |||||||||| ||||  ||| ||  | ||||||||||||| |||||||||  ||  |||||||||||||||    
T  11756971 tgtgtttggtaacacgaataagctagcttatgacttgttggactagcttataagctcgttttgatataataagatgtgtttggtaaa 11756885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 30899521 - 30899435
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | ||||||||| |  ||||||||||  |||  ||||||||||||||    
T  30899521 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttatatgtctgttttgataaaatgaaatgtgtttggtaaa 30899435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 372
Target Start/End: Original strand, 38058746 - 38058808
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    ||||||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||| ||||||    
T  38058746 ggttgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataaccttgtt 38058808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 40640679 - 40640741
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttg 375  Q
    |||||||||||| | ||||||| ||| |||||||||||   | ||||||||||||||||||||    
T  40640679 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 40640741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 42159609 - 42159707
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    ||||||||||||||| || |||||||||| ||||||||| ||  | ||||||| | | |||||||||||  ||  |||||||||| ||||  |||||||    
T  42159609 ggttgtgtttggtaacacgaataagctagcttatagcttgttggaatagcttaaatgtttgttttgatataataagatgtgtttgctaaaaagcttttt 42159707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 11332837 - 11332897
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| |||||||||||| ||||| |||||||||||||| || ||  | |||||||||||||    
T  11332837 taggctgtgtttggtaacacaaaaaagctagtttatagtttgttggactagcttataagct 11332897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 11490858 - 11490918
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| |||||||||||| ||||| |||||||||||||| || ||  | |||||||||||||    
T  11490858 taggctgtgtttggtaacacaaaaaagctagtttatagtttgttggactagcttataagct 11490918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 399
Target Start/End: Original strand, 34086201 - 34086285
Alignment:
Q  315 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||| ||||| || |||| |||||| || |   ||||||||||||| |||||||||||| |||  || |||||||||||    
T  34086201 tgtttggtaacacaaaaaacctagcttatagtttgtcggattagcttataagtttgttttgatagaatgaaatatgtttggtaaa 34086285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 38815653 - 38815593
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| ||| |||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  38815653 taggctgtatttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 38815593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 308 - 399
Target Start/End: Complemental strand, 18368838 - 18368747
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  18368838 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 18368747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 1789787 - 1789873
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| || ||||||||||||    
T  1789787 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagacgtgtttggtaaa 1789873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 399
Target Start/End: Original strand, 190919 - 191009
Alignment:
Q  309 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||| |||| ||| ||||| ||| ||||||||||||| ||  | ||| |||||||||||||||||||  ||| |||||||||||||||    
T  190919 aggttgtatttgataacacaaaaaagttagtttatagcttgttggactagtttataagcttgttttgataaaatgagatgtgtttggtaaa 191009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 15508349 - 15508435
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| || |||||||||| ||||||||| ||  | |||||||||||||| ||||||||  ||  |||||||||||||||    
T  15508349 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttattttgatataataagatgtgtttggtaaa 15508435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 18801700 - 18801786
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | || ||||||||||||||||||||  ||| || ||||||||||||    
T  18801700 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactaacttataagcttgttttgataaaatgagacgtgtttggtaaa 18801786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 31604011 - 31603925
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||| ||| ||||||||||||| |||||| ||  |  | |||||||||||||||||||||||| ||  |||||||||||||||    
T  31604011 tgtgtttgataacacaaataagctagcttatagtttgctggactagcttataagcttgttttgatagaatacgatgtgtttggtaaa 31603925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 378
Target Start/End: Complemental strand, 32562513 - 32562445
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 378  Q
    ||||||||||||||| || |||||||||| ||||||||| ||  | ||||||||||| |||||||||||    
T  32562513 ggttgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagtttgttttgata 32562445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 395
Target Start/End: Original strand, 13866263 - 13866346
Alignment:
Q  312 ttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttgg 395  Q
    ||||||||||||| | ||| ||||||| ||||||||| ||  | |||||||||| || |||||||||| ||| |||||||||||    
T  13866263 ttgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataaactagttttgatagaatgagatgtgtttgg 13866346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 408
Target Start/End: Original strand, 24159238 - 24159333
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    |||||||||||| || |||||| ||| |||||| || ||  | |||||||||||||||||||||||  ||  |||||||||||||||  |||||||    
T  24159238 tgtgtttggtaacacgaataaggtagcttatagtttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaaaagcttttt 24159333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 4976524 - 4976610
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| ||||| || |||| ||||||| | ||  | |||||||||||||||||||||||  ||| || ||||||||||||    
T  4976524 tgtgtttggtaacacaaaaaaactagcttatagcctgttggactagcttataagcttgttttgataaaatgagacgtgtttggtaaa 4976610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 368
Target Start/End: Complemental strand, 20992371 - 20992309
Alignment:
Q  306 cataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||| |||||||||| ||||| |||||||||||||| || ||  |||||||||||||||    
T  20992371 cataggttctgtttggtaacacaaaaaagctagtttatagtttgttggattagcttataagct 20992309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 378
Target Start/End: Complemental strand, 5090183 - 5090118
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 378  Q
    |||||||||||| || |||||||||| ||||||||| ||  | ||||||||||| |||||||||||    
T  5090183 tgtgtttggtaacacgaataagctagcttatagcttcttggactagcttataagtttgttttgata 5090118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 25023552 - 25023495
Alignment:
Q  315 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 372  Q
    |||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||||||    
T  25023552 tgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagcttgtt 25023495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 24119343 - 24119283
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  24119343 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 24119283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 13756419 - 13756364
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| || || ||||||||||||||||| ||  |||||||||||||||    
T  13756419 tgtgtttggtaacacgaaaaagctagtttatagcttgttggattagcttataagct 13756364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 20645646 - 20645713
Alignment:
Q  301 ttacacataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    ||||| ||||| |||||||||||| ||||| ||||||| |||||| || ||  |||||||||||||||    
T  20645646 ttacaaataggctgtgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataagct 20645713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 1290382 - 1290468
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||||||||||| | ||||||| ||| ||||||||| ||  | |||||||||||||| || |||||| ||  | |||||||||||||    
T  1290382 tgtgtttggtaaaataaataagttagcttatagcttgttagaatagcttataagcttattatgatagaataagttgtgtttggtaaa 1290468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 368
Target Start/End: Original strand, 21860231 - 21860289
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||| |||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  21860231 ggttgtgtttagtaacacaaaaaagctagcttatagcttgttggattagcttataagct 21860289  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 399
Target Start/End: Complemental strand, 34574697 - 34574608
Alignment:
Q  310 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    ||||||||||| ||| || | |||| ||| ||||| ||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  34574697 ggttgtgtttgataacacgagtaagttagcttataacttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 34574608  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 21778190 - 21778130
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| |||||||||||| ||||| ||||||||||||||| | ||  |||| ||||||||||    
T  21778190 taggctgtgtttggtaacacaaaaaagctagtttatagcctgttggattaacttataagct 21778130  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 22707286 - 22707346
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  ||||| |||||||||    
T  22707286 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagtttataagct 22707346  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 399
Target Start/End: Complemental strand, 31259633 - 31259561
Alignment:
Q  327 caaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||| ||||||| ||||||||| ||    |||||||||||||||||||||||  ||| ||||||||| |||||    
T  31259633 caaaaaagctagattatagcttgttgggctagcttataagcttgttttgataaaatgagatgtgtttagtaaa 31259561  T

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Target: scaffold0115 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 308 - 399
Target Start/End: Original strand, 4144 - 4235
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | ||||||||||||||||||| |||  ||| |||||||||||||||    
T  4144 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttaataaaatgagatgtgtttggtaaa 4235  T

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Target: scaffold0115; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 308 - 399
Target Start/End: Original strand, 11884 - 11975
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 399  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | ||||||||||||||||||| |||  ||| |||||||||||||||    
T  11884 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttaataaaatgagatgtgtttggtaaa 11975  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 94501 - 94408
Alignment:
Q  315 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttt 408  Q
    |||||||||| || |||||||||| ||||||||| ||  | |||||||||| ||||||||||||  ||  |||||||||||||||  |||||||    
T  94501 tgtttggtaacacgaataagctagcttatagcttgttgaactagcttataaacttgttttgatataataagatgtgtttggtaaaaagcttttt 94408  T

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Target: scaffold0076 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 14295 - 14235
Alignment:
Q  308 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    ||||||||||||||||| ||||| ||||||| |||||| |||||  ||||| |||||||||    
T  14295 taggttgtgtttggtaacacaaaaaagctagcttatagtttattggattagattataagct 14235  T

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Target: scaffold0060 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 57948 - 57893
Alignment:
Q  313 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  57948 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 57893  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 368
Target Start/End: Complemental strand, 157718 - 157659
Alignment:
Q  309 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 368  Q
    |||||||||||||||| | ||||||||||| |||||| || ||  |||||||||||||||    
T  157718 aggttgtgtttggtaacataaataagctagcttatagtttgttagattagcttataagct 157659  T

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