View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9365_low_33 (Length: 218)
Name: NF9365_low_33
Description: NF9365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9365_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 35318535 - 35318334
Alignment:
| Q |
1 |
aatgaggaaagtgaatgtatttgggaaagaaagatttcgtgcactagctgactgtgttagaagacaagactagattgatttatgatctaaatttagaaac |
100 |
Q |
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| T |
35318535 |
aatgaggaaagtgaatgtatttgggaaagaaagatttcgtgcactagctgactgtgttagaagacaagactagattgatttatgatctaaatttagaaac |
35318436 |
T |
|
| Q |
101 |
tcattctagtgggtgaaagaacaccaaatcgagaaaactgtcatttctcttttcctctaatttccttccagtacatcacacatgacatgaaatatttcaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35318435 |
tcattctagtgggtgaaagaacaccaaatcgagaaaactgtcatgtctcttttcctctaatttccttccagtacatcacacatgacatgaaatatttcaa |
35318336 |
T |
|
| Q |
201 |
aa |
202 |
Q |
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|| |
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|
| T |
35318335 |
aa |
35318334 |
T |
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