View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9366_high_81 (Length: 241)
Name: NF9366_high_81
Description: NF9366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9366_high_81 |
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Alignment Details
Target: chr4 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 93 - 238
Target Start/End: Original strand, 51794723 - 51794868
Alignment:
| Q |
93 |
attatatattaaacctctatttaagaaatacaaacgatctactcgcatatcacatcccatgaacccaagctccctctaggtttccacttctcttcgttca |
192 |
Q |
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| T |
51794723 |
attatatattaaacctctatttgagaaatacaaacgatctactcgcatatcacatcccatgaacccaagctccctctaggtttccacttctcttcgttca |
51794822 |
T |
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| Q |
193 |
cacaattttttatttgtgtaatattcattcatttaagcaatttaac |
238 |
Q |
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| T |
51794823 |
cacaattttttatttgtgtaatattcattcatttacgcaatttaac |
51794868 |
T |
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