View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9366_low_112 (Length: 296)
Name: NF9366_low_112
Description: NF9366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9366_low_112 |
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Alignment Details
Target: chr7 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 19 - 282
Target Start/End: Original strand, 29505482 - 29505745
Alignment:
| Q |
19 |
ttccggggtcggacaatatcttaaatcacaaaaccctaatgttaaggtgattttctcctaagattacaattcatattactaactaaaaagtgttctgtta |
118 |
Q |
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| T |
29505482 |
ttccggggtcggacaatatcttaaatcacaaaaccctaatgttaaggtgattttctcctaaaattacaattcatattactaactaaaaagtgttctgtta |
29505581 |
T |
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| Q |
119 |
gataatttcattgaatccttttaaaaaatttcaatcttattagatatatggagtggagccatctgaaagtaatgtgctgaatggtggtaaacccggtaag |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29505582 |
gataatttcattgaatccttttaaaaaatttcaatcttattagatatatggagtggagccatctgaaagtaatgtgctgaatggtggtaaacccggtaag |
29505681 |
T |
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| Q |
219 |
catcattttgtttctttgatattatttcacttttttatgtgataaaatttgtacaagtctctta |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29505682 |
catcattttgtttctttgatattatttcacttttttatgtgataaaatttgtacaagtctctta |
29505745 |
T |
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