View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9366_low_125 (Length: 284)
Name: NF9366_low_125
Description: NF9366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9366_low_125 |
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Alignment Details
Target: chr8 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 29018863 - 29019128
Alignment:
| Q |
1 |
ttgacccatcgtgcgtggaatggaacaattcaatgtgttattattggtagcaaagttatgtgcattacaatttacaaacccgaccaaaaagtagaacatg |
100 |
Q |
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| T |
29018863 |
ttgacccatcgtgcgtggaatggaacaattcaatgtgttattattggtagcaaaattatgtgcattacaatttacaaacccgacaaaaaagtagaacatg |
29018962 |
T |
|
| Q |
101 |
taaacaaggaagaataagatctatcgttggtaagatatgttttgcttctaagtgttattttattgaaataatgatagataagcacttggtgtgtctatga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29018963 |
taaacaaggaagaataagatctatcgttggtaagatatgttttgcttctaagtgttattttattgaaataatgatagataagcacttggtgtgtctatga |
29019062 |
T |
|
| Q |
201 |
tgatctacattactcgctattgttccataccgacataaatcgaaaatagatcccctatagggtaaa |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29019063 |
tgatctacattactcgctattgttccataccgacataaatcgaaaatagatcccctatagggtaaa |
29019128 |
T |
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