View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9366_low_135 (Length: 260)
Name: NF9366_low_135
Description: NF9366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9366_low_135 |
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Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 34006290 - 34006539
Alignment:
| Q |
1 |
ctttttcatgttatatgcttacttaccactgaaaatttacttttacttattgtgtagcgttcgagtatcaaatgagcttggtaaaggaagcgcgaaagcc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34006290 |
ctttttcatgttatatgcttacttaccactgaaaatttacttttacttattgtgtagcgttcgagtatcaaatgagcttggtaaaggaagcgcgaaagcc |
34006389 |
T |
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| Q |
101 |
gcgaagttctcgatcgttgtgacagtgcttacgtcgttggcgatcggatcctttctgnnnnnnnnnnnnnnnnnnnnnagagaaagacttgcttacattt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
34006390 |
gcgaagttctcgatcgttgtgacagtgcttacgtcgttggcgatcggatcctttctgtttttgtttttcttattttttagagaaagacttgcttacattt |
34006489 |
T |
|
| Q |
201 |
tcacctcgaataaagaggtggccgcagctgtcggagaattatcgcctttg |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34006490 |
tcacctcgaataaagaggtggccgcagctgtcggagaattatcgcctttg |
34006539 |
T |
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