View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9366_low_200 (Length: 231)
Name: NF9366_low_200
Description: NF9366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9366_low_200 |
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Alignment Details
Target: chr5 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 13786543 - 13786737
Alignment:
| Q |
1 |
ttagtgcattaaaatcagaagcaagtcaagatcttttcccatatacaaagaataatactaacatatttaatttatttatttaatatgaacaaacacgata |
100 |
Q |
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| T |
13786543 |
ttagtgcattaaaatcagaagcaagtcaagatcttttcccatatacaaagaataatactaacatatttaatttatttatttaatatgaacaaacacgata |
13786642 |
T |
|
| Q |
101 |
tagtatcatgctagattgctaatgaagttccaggaaggtccacatttgtcaactacattcattgataatgtttttatataaataccatatgttac |
195 |
Q |
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| T |
13786643 |
tagtatcatgctagattgctaatgaagttccaggaaggtccacatttgtcaactacattcattgataatgtttttatataaatacgatatgttac |
13786737 |
T |
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