View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9366_low_201 (Length: 230)

Name: NF9366_low_201
Description: NF9366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9366_low_201
NF9366_low_201
[»] chr1 (3 HSPs)
chr1 (11-205)||(268394-268588)
chr1 (11-205)||(28164399-28164593)
chr1 (11-205)||(28127716-28127911)
[»] chr8 (2 HSPs)
chr8 (11-205)||(29273820-29274014)
chr8 (45-204)||(31903795-31903954)
[»] chr4 (7 HSPs)
chr4 (11-206)||(18679604-18679799)
chr4 (11-206)||(18724122-18724317)
chr4 (11-205)||(18655514-18655708)
chr4 (11-205)||(18699437-18699631)
chr4 (11-205)||(18731541-18731735)
chr4 (11-106)||(17989090-17989185)
chr4 (11-106)||(18073804-18073899)
[»] chr6 (62 HSPs)
chr6 (19-204)||(31284232-31284417)
chr6 (11-204)||(26622920-26623113)
chr6 (11-204)||(26728898-26729091)
chr6 (19-204)||(26823784-26823969)
chr6 (11-204)||(27677664-27677857)
chr6 (20-204)||(26861560-26861744)
chr6 (19-205)||(26646422-26646608)
chr6 (19-205)||(26752390-26752576)
chr6 (11-204)||(27678890-27679083)
chr6 (11-204)||(27706452-27706645)
chr6 (11-204)||(27718429-27718622)
chr6 (11-204)||(27611052-27611245)
chr6 (11-204)||(27698544-27698737)
chr6 (11-204)||(27724895-27725088)
chr6 (19-204)||(27593078-27593263)
chr6 (19-204)||(26802386-26802571)
chr6 (19-204)||(28781083-28781268)
chr6 (22-204)||(27531258-27531440)
chr6 (11-204)||(25579663-25579856)
chr6 (19-204)||(27604763-27604948)
chr6 (11-204)||(26142809-26143002)
chr6 (19-204)||(28786222-28786407)
chr6 (19-204)||(28792343-28792528)
chr6 (24-204)||(26884107-26884287)
chr6 (11-204)||(25481686-25481879)
chr6 (11-204)||(26055870-26056063)
chr6 (11-204)||(26075840-26076033)
chr6 (19-204)||(26655933-26656118)
chr6 (19-204)||(26761904-26762089)
chr6 (11-204)||(27338115-27338308)
chr6 (11-204)||(27398855-27399048)
chr6 (41-204)||(27229176-27229339)
chr6 (20-183)||(28234529-28234692)
chr6 (13-185)||(28181077-28181249)
chr6 (19-181)||(28226917-28227079)
chr6 (11-204)||(25538484-25538677)
chr6 (11-204)||(26048789-26048982)
chr6 (11-204)||(26069958-26070151)
chr6 (20-185)||(28185329-28185494)
chr6 (20-204)||(28139485-28139669)
chr6 (13-181)||(28242771-28242939)
chr6 (13-174)||(28149912-28150072)
chr6 (30-164)||(25506978-25507112)
chr6 (19-170)||(26341992-26342143)
chr6 (13-107)||(28297765-28297859)
chr6 (13-107)||(28514214-28514308)
chr6 (13-109)||(28325520-28325616)
chr6 (19-109)||(2184327-2184417)
chr6 (23-82)||(26937160-26937219)
chr6 (11-106)||(27427656-27427751)
chr6 (19-66)||(26975134-26975181)
chr6 (19-109)||(28098427-28098517)
chr6 (19-204)||(26848604-26848789)
chr6 (19-66)||(2184980-2185027)
chr6 (19-66)||(25071741-25071788)
chr6 (156-202)||(27665312-27665358)
chr6 (22-67)||(27214498-27214543)
chr6 (22-67)||(27234685-27234730)
chr6 (39-178)||(26893549-26893688)
chr6 (19-64)||(26949745-26949790)
chr6 (127-204)||(29825971-29826048)
chr6 (19-67)||(27665175-27665223)
[»] scaffold0349 (2 HSPs)
scaffold0349 (11-204)||(3471-3665)
scaffold0349 (11-204)||(14406-14598)
[»] scaffold0277 (2 HSPs)
scaffold0277 (11-204)||(4721-4914)
scaffold0277 (19-204)||(13690-13875)
[»] scaffold0419 (1 HSPs)
scaffold0419 (19-204)||(7469-7654)
[»] scaffold1254 (1 HSPs)
scaffold1254 (54-204)||(10-160)
[»] scaffold0038 (4 HSPs)
scaffold0038 (13-183)||(34690-34860)
scaffold0038 (19-181)||(27415-27577)
scaffold0038 (13-181)||(42933-43101)
scaffold0038 (13-109)||(116835-116931)
[»] scaffold0019 (1 HSPs)
scaffold0019 (13-204)||(58334-58525)
[»] chr2 (2 HSPs)
chr2 (19-170)||(3279666-3279817)
chr2 (19-66)||(17993742-17993789)
[»] scaffold0003 (1 HSPs)
scaffold0003 (11-106)||(59612-59707)


Alignment Details
Target: chr1 (Bit Score: 179; Significance: 9e-97; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 268394 - 268588
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  268394 gtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 268493  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatg 205  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  268494 ttgtcgagtgatggtttgatttcatcccctctttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatg 268588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 28164399 - 28164593
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| | |||||||||     
T  28164399 gtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagataacacaggaataaaaattcaagatttttcaatggcc 28164498  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatg 205  Q
    |||  || ||| | | ||||||| || ||||| | ||| ||||||||||||||||| ||||| |||||||||||   ||| ||||| ||||||||    
T  28164499 ttgatgaatgacggtgtgatttcttctcctctctcaagatcacaatcatcaatgaatgtgtgaattcccttgtcgtcaagggccttatagagatg 28164593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 28127716 - 28127911
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||||||     
T  28127716 gtagcagtgaatgatgtgcacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaatacaggaataaaaattctagattcttcaatggcc 28127815  T
Q  111 ttgtcgagtgatgatttga-tttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatg 205  Q
    ||    ||||| | | ||| |||  || ||||| | ||| | ||||||||||||||| ||||||||||||||||||  ||| ||||||||||||||    
T  28127816 tttaaaagtgacggtgtgatttttttctcctctctcaagattacaatcatcaatgaatgtgtggattcccttgtcataaagggccttgtagagatg 28127911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 171; Significance: 6e-92; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 29273820 - 29274014
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  29273820 gtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaattctagactcttcaatgaca 29273919  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatg 205  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29273920 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagtcttgtagagatg 29274014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 204
Target Start/End: Complemental strand, 31903954 - 31903795
Alignment:
Q  45 caaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgagtgatgatttgatttcatcccctcttt 144  Q
    |||||||||||||| ||||||||  |||| | ||||  |||   |||||||||||||||||| || |     ||||||| | |||||||||  |||||||    
T  31903954 caaaatgaagaagaagcatagtttttagagagcacaataatggcaatcctagactcttcaattgcctctaaaagtgatggtgtgatttcatgtcctcttt 31903855  T
Q  145 gaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    |||||||   ||| ||||| ||||||||||||||||| |||  |||||| ||||||||||    
T  31903854 gaagttcttcatcgtcaataaaggtgtggattcccttatcataaagagctttgtagagat 31903795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 156; Significance: 5e-83; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 11 - 206
Target Start/End: Original strand, 18679604 - 18679799
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  18679604 gtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggca 18679703  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatga 206  Q
    ||||||||||||| ||||||||||||||||||||| || ||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18679704 ttgtcgagtgatggtttgatttcatcccctctttgcaggtcacggtcatcaatgaaggtgtggattcctttgtcagtaagagccttgtagagatga 18679799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 11 - 206
Target Start/End: Original strand, 18724122 - 18724317
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| | |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  18724122 gtagcagtgcatgatgtggacaagttcgttcaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggca 18724221  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatga 206  Q
    ||||||||||||| ||||||||||||||||||||| || ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18724222 ttgtcgagtgatggtttgatttcatcccctctttgcaggtcacggtcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatga 18724317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 18655514 - 18655708
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  18655514 gtagcagtgaatgatgcggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaagatcctagactcttgaatggca 18655613  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatg 205  Q
    ||||||||||||| ||||||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18655614 ttgtcgagtgatggtttgatttcatccccactttgcagctcacggtcatcaatgaaggtgtggattcccttgtcagtaagagctttgtagagatg 18655708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 18699437 - 18699631
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  18699437 gtagcagtgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggca 18699536  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatg 205  Q
    ||||||||||||| ||||||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18699537 ttgtcgagtgatggtttgatttcatccccactttgcaggtcacggtcatcaatgaaggtgtggattcccttgtcagtaagagctttgtagagatg 18699631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 18731541 - 18731735
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  18731541 gtagcagtgcatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggca 18731640  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatg 205  Q
    ||||||||||||| ||||||||||||||||||||| || ||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  18731641 ttgtcgagtgatggtttgatttcatcccctctttgcaggtcacggtcatcaatgaaggtgtggattcccttgtcagtaagagctctgtagagatg 18731735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 17989090 - 17989185
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaat 106  Q
    ||||||| |||||||||||||||||  |||||||||| |||||||||| |||||||||  |||||| |  ||||| |||||||| || ||||||||    
T  17989090 gtagcagtgaatgatgtggacaagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 17989185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 18073899 - 18073804
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaat 106  Q
    ||||||| |||||||||||||||||  |||||||||| |||||||||| |||||||||  |||||| |  ||||| |||||||| || ||||||||    
T  18073899 gtagcagtgaatgatgtggacaagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 18073804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 146; Significance: 5e-77; HSPs: 62)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 31284417 - 31284232
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    |||||||||||||||||| |||||||||||| || |||||||||||||||  ||||||||| || |||||||||||||||||||||||||||||||||||    
T  31284417 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgag 31284318  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31284317 tgatggtgtgatttcatcccctctttgaagttcactatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 31284232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 26623113 - 26622920
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| ||||||||||||||||||  |||||||||||||||||| | |||||||||  ||||||||||||||||||||||||||||||||| || |||    
T  26623113 gtagcagtgaatgatgtggacaagttcatccaaacaaaatgaagaatatgcatagttgggagaaaacacaggaataaaaatcctagactcttcgatagca 26623014  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26623013 ttgtcaagtgatggtttgatttcgtcccctctttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 26622920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 26729091 - 26728898
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| ||||||||||||||||||  |||||||||||||||||| | |||||||||  ||||||||||||||||||||||||||||||||| || |||    
T  26729091 gtagcagtgaatgatgtggacaagttcatccaaacaaaatgaagaatatgcatagttgggagaaaacacaggaataaaaatcctagactcttcgatagca 26728992  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26728991 ttgtcaagtgatggtttgatttcgtcccctctttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 26728898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 26823969 - 26823784
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| | |||    
T  26823969 gaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttggcagaaaacacaggaataaaaatcctagactcttcaatggcattattgag 26823870  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||||  || ||||| |||||||||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||    
T  26823869 tgattgttcgattttatcccctctttgaagttcacgatcatcaaaaaaggtgtggattcccttgtctgtaagagccttgtagagat 26823784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 27677664 - 27677857
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  27677664 gtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacagcaataaaaatcctagactcttcaatggcc 27677763  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    |||   ||||||| | ||||||||||||||||||||||||||  ||  |||||||||||||||||||||||||||  |||||||||||||||||    
T  27677764 ttgagaagtgatggtgtgatttcatcccctctttgaagttcatgattgtcaatgaaggtgtggattcccttgtcatcaagagccttgtagagat 27677857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 26861744 - 26861560
Alignment:
Q  20 aatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgagt 119  Q
    |||||| ||||||||||  |||||||||||||| |||||||||||||||  ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  26861744 aatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagt 26861645  T
Q  120 gatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    |||  ||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  26861644 gatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagat 26861560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 19 - 205
Target Start/End: Complemental strand, 26646608 - 26646422
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||  |||    
T  26646608 gaatgatgtggacaagttcgtccaaacaaaatttagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcttcaatggccttgatgag 26646509  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatg 205  Q
    ||||| | |||||||||| ||||| | ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26646508 tgatggtgtgatttcatctcctctcttaagatcacaatcatcaatgaaggtgtgaattcccttgtcagtaagagccttgtagagatg 26646422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 19 - 205
Target Start/End: Complemental strand, 26752576 - 26752390
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||  |||    
T  26752576 gaatgatgtggacaagttcgtccaaacaaaatttagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcttcaatggccttgatgag 26752477  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatg 205  Q
    ||||| | |||||||||| ||||| | ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26752476 tgatggtgtgatttcatctcctctcttaagatcacaatcatcaatgaaggtgtgaattcccttgtcagtaagagccttgtagagatg 26752390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 27679083 - 27678890
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  27679083 gtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcc 27678984  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    |||   ||||||| | |||||||||| |||||||||||  ||   | |||||||||||||| ||||||||||||||||||||||||||||||||    
T  27678983 ttgagaagtgatggtgtgatttcatctcctctttgaagaccattcttatcaatgaaggtgttgattcccttgtcagtaagagccttgtagagat 27678890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 27706452 - 27706645
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  27706452 gtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcataggtgatagaaaacacaggaataaaaatcctagactcttcaatggcc 27706551  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    |||   ||||||| | |||||||||||| |||||||||||||  ||  |||||||||||||||||||||||||||  || ||||||||||||||    
T  27706552 ttgagaagtgatggtgtgatttcatcccttctttgaagttcatgattgtcaatgaaggtgtggattcccttgtcatcaaaagccttgtagagat 27706645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 27718429 - 27718622
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||     
T  27718429 gtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggcc 27718528  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    |||  |||||||| | |||||||||| ||||||||||| |||   |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27718529 ttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagat 27718622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 27611052 - 27611245
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||     
T  27611052 gtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggcc 27611151  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    |||  |||||||| | |||||||||| |||||| |||| |||   |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27611152 ttgaggagtgatggtgtgatttcatctcctcttggaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagat 27611245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 27698544 - 27698737
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||| ||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| || ||||||||     
T  27698544 gtagcagtgaattatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttgagagaaaacacaggaataaaaatcctagattcatcaatggcc 27698643  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    |||  |||||||| | |||||||||| ||||||||||| |||   |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27698644 ttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagat 27698737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 27724895 - 27725088
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||| ||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||     
T  27724895 gtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaataggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggcc 27724994  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    |||  |||||||| | |||||||||| ||||||||||| |||   |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27724995 ttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagat 27725088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 19 - 204
Target Start/End: Original strand, 27593078 - 27593263
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    ||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||   ||    
T  27593078 gaatgatgtggtcaagttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggccttgagaag 27593177  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||||| | |||||||||  |||||||||||  ||   |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27593178 tgatggtgtgatttcatttcctctttgaagaccattgtcatcaatgaaggtgttgattcccttgtcagtaagagccttgtagagat 27593263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 26802571 - 26802386
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    |||| ||||| ||||||| |||||| ||||||   |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||  |||    
T  26802571 gaataatgtgaacaagttcgtccaagcaaaattttgaagaggcatagttgatagaaaacacaggaataaaaattctagattcttcaatggccttgatgag 26802472  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||||| | |||||||||| ||||||||||| |||   |||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  26802471 tgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcaataagagccttgtagagat 26802386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 28781268 - 28781083
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    |||| ||||| ||||||| |||||| ||||||   |||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||  |||    
T  28781268 gaataatgtgaacaagttcgtccaagcaaaattttgaagtggcatagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggag 28781169  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||||| | |||||||||| ||||||||||| |||   |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  28781168 tgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagat 28781083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 204
Target Start/End: Original strand, 27531258 - 27531440
Alignment:
Q  22 tgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgagtga 121  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||||||   |||||| || ||||||||||||||||| | |||||||||||| |  |||||    
T  27531258 tgatgtgaacaagttcgtccaaacaaaatgaagaagatgcatagttttcagaaaatacgggaataaaaatcctagatttttcaatggcattttttagtga 27531357  T
Q  122 tgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    || | |||||||||| ||||||||||| |||   |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  27531358 tggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatagattcccttgtcagtaagagccttgtagagat 27531440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 25579856 - 25579663
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||  |||||| |  ||||||||||||||||| |||||||||||     
T  25579856 gtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttcaatggcc 25579757  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||| | ||||||| | |||||||||| ||||||||||| |||  |||||||| ||||||  | ||||||||||||  ||||||||| |||||||    
T  25579756 ttgacaagtgatggtgtgatttcatctcctctttgaagatcattatcatcaaagaaggtacgaattcccttgtcaacaagagccttatagagat 25579663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 204
Target Start/End: Original strand, 27604763 - 27604948
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    |||||||||| |||||||  ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || || |||||||| |||   ||    
T  27604763 gaatgatgtgaacaagttcatccaaacaaaaggaagaagaggcatatttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaag 27604862  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    || || | |||||||||| |||||| |||| |||   |||||||||||||| || |||||||||||||||||||||||||||||||    
T  27604863 tgctggtgtgatttcatctcctcttcgaagatcattttcatcaatgaaggtatgaattcccttgtcagtaagagccttgtagagat 27604948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 26143002 - 26142809
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||  |||||| |  ||||||||||||||||| |||||||||||     
T  26143002 gtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttcaatggcc 26142903  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||| | ||||||| | |||||||||| ||||||| ||| |||  |||||||||||| ||  | ||||||||||||  ||||||||| |||||||    
T  26142902 ttgacaagtgatggtgtgatttcatctcctctttcaagatcattatcatcaatgaaagtacgaattcccttgtcaacaagagccttatagagat 26142809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 28786407 - 28786222
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    |||| ||||| ||||||| |||||| ||||||   || | ||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |||  |||    
T  28786407 gaataatgtgaacaagttcgtccaagcaaaattttgatgtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggag 28786308  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||||| | |||||||||| ||||||||||| |||   |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  28786307 tgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagat 28786222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 28792528 - 28792343
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    |||| ||||| ||||||| |||||| ||||||   || | ||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |||  |||    
T  28792528 gaataatgtgaacaagttcgtccaagcaaaattttgatgtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggag 28792429  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||||| | |||||||||| ||||||||||| |||   |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  28792428 tgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagat 28792343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 24 - 204
Target Start/End: Complemental strand, 26884287 - 26884107
Alignment:
Q  24 atgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgagtgatg 123  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| ||||||| |  ||||||||||| ||||| ||||||||||| |||  ||||||||    
T  26884287 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 26884188  T
Q  124 atttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
     | |||||||    |||||| |||| | |  ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26884187 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagat 26884107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 25481879 - 25481686
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||  |||||| |  |||||| |||||||||| |||||||||||     
T  25481879 gtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaatacaaatcctagattcttcaatggcc 25481780  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||| | ||||||| | |||||||||| ||||||||||| |||   ||||||||||| ||  | ||||||||||||  ||||||||| |||||||    
T  25481779 ttgacaagtgatggtgtgatttcatctcctctttgaagatcattttcatcaatgaaagtacgaattcccttgtcaacaagagccttatagagat 25481686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 26056063 - 26055870
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||  |||||| |  ||||||||||||| ||| ||||| |||||     
T  26056063 gtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcccagattcttcgatggcc 26055964  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||| | ||||||||| |||||||||| ||||||||||| |||   ||||||||||| || |  ||||||||||||  ||||||||| |||||||    
T  26055963 ttgacaagtgatgatgtgatttcatctcctctttgaagatcattttcatcaatgaaagtattaattcccttgtcaacaagagccttatagagat 26055870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 26076033 - 26075840
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||  |||||| |  ||||||||||||| ||| ||||| |||||     
T  26076033 gtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcccagattcttcgatggcc 26075934  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||| | ||||||||| |||||||||| ||||||||||| |||   ||||||||||| || |  ||||||||||||  ||||||||| |||||||    
T  26075933 ttgacaagtgatgatgtgatttcatctcctctttgaagatcattttcatcaatgaaagtattaattcccttgtcaacaagagccttatagagat 26075840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 26656118 - 26655933
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||  |||||| |  |||||||||||||| || ||||||||||| ||  ||||    
T  26656118 gaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctggattcttcaatggccttaacgag 26656019  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||||| | |||||||||| |||||  |||| |||   ||||||||||| || ||||||||||| ||| ||||||||||||||||||    
T  26656018 tgatggtgtgatttcatctcctctgagaagatcattgtcatcaatgaaagtatggattcccttatcaataagagccttgtagagat 26655933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 26762089 - 26761904
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||  |||||| |  |||||||||||||| || ||||||||||| ||  ||||    
T  26762089 gaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctggattcttcaatggccttaacgag 26761990  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||||| | |||||||||| |||||  |||| |||   ||||||||||| || ||||||||||| ||| ||||||||||||||||||    
T  26761989 tgatggtgtgatttcatctcctctgagaagatcattgtcatcaatgaaagtatggattcccttatcaataagagccttgtagagat 26761904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 27338115 - 27338308
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||||||||||||| |||||| |||||||||||||| ||||||||   |||||| |  ||||| |||||||||||||||||||||||     
T  27338115 gtagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagatgcatagtttgcagaaaatatgggaatcaaaatcctagactcttcaatggcc 27338214  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||| | ||||||| | || ||||||| ||||||| ||| ||    |||||||||||||| | ||||||||||||| ||||||||||||||||||    
T  27338215 ttgacaagtgatggtgtgctttcatctcctctttcaagatcgttgtcatcaatgaaggttttgattcccttgtcaataagagccttgtagagat 27338308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 27398855 - 27399048
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||||||||||||| |||||| |||||||||||||| ||||||||   |||||| |  ||||| |||||||||||||||||||||||     
T  27398855 gtagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagatgcatagtttgcagaaaatatgggaatcaaaatcctagactcttcaatggcc 27398954  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||| | ||||||| | || ||||||| ||||||| ||| ||    |||||||||||||| | ||||||||||||| ||||||||||||||||||    
T  27398955 ttgacaagtgatggtgtgctttcatctcctctttcaagatcgttgtcatcaatgaaggttttgattcccttgtcaataagagccttgtagagat 27399048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 41 - 204
Target Start/End: Complemental strand, 27229339 - 27229176
Alignment:
Q  41 caaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgagtgatgatttgatttcatcccct 140  Q
    |||||||||||||||||| |||||||||  |||||| |  ||||||||||||| ||| || |||||||| ||| ||||||||| | ||||||| || |||    
T  27229339 caaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatccgagattcgtcaatggccttgacgagtgatggtgtgatttcgtctcct 27229240  T
Q  141 ctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    |||||||| |||   |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27229239 ctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagat 27229176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 28234692 - 28234529
Alignment:
Q  20 aatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgagt 119  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||||||||||| |||   |||    
T  28234692 aatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaagt 28234593  T
Q  120 gatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgt 183  Q
    |||| | | |||||||| |||| |||||| || |  ||||||||||||||||||||||||||||    
T  28234592 gatggtgttatttcatctcctccttgaagctccctgtcatcaatgaaggtgtggattcccttgt 28234529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 28181249 - 28181077
Alignment:
Q  13 agcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcatt 112  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||| ||||| |||||||| || || ||||| ||||||||||||||||||||||| ||    
T  28181249 agcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacgggaatgaaaatcctagactcttcaatggcctt 28181150  T
Q  113 gtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtca 185  Q
    |   ||||||||| | ||||| || |||| |||||| || |  ||||| ||||||||  ||||||||||||||    
T  28181149 gaaaagtgatgatgttatttcttcacctccttgaagctctctgtcatccatgaaggttcggattcccttgtca 28181077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 28227079 - 28226917
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||| |||||||| || |||||||| ||||||||||| ||||||||| | |||   ||    
T  28227079 gaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagattcttcaatgaccttgaaaag 28226980  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattccctt 181  Q
    ||||||| | |||||||| |||| |||||| || | |||||||| ||| ||||| ||||||||    
T  28226979 tgatgatgttatttcatcacctccttgaagctctctatcatcaaagaatgtgtgaattccctt 28226917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 25538677 - 25538484
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||||||| |||||||||  |||||| |  ||||||||||| ||||| ||||| |||||     
T  25538677 gtagcagtgaatgatctggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaattctagattcttcgatggcc 25538578  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||| | ||||||| | |||||||||| ||||||| ||| |||  |||||| ||||| ||    ||||||||||||  ||||||||| |||||||    
T  25538577 ttgacaagtgatggtgtgatttcatctcctctttcaagatcattatcatctatgaaagtactaattcccttgtcaacaagagccttatagagat 25538484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 26048982 - 26048789
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||  |||||| |  ||||||||||||||||| ||||| |||||     
T  26048982 gtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttccatggcc 26048883  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||| | |||   | | |||||||||| ||||||| ||| |||  |||||||||||| ||    |||||||||||| | |||||||| |||||||    
T  26048882 ttgacaagtttgggtgtgatttcatctcctctttcaagatcattatcatcaatgaaagtacaaattcccttgtcaatgagagccttatagagat 26048789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 26070151 - 26069958
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||  |||||| |  ||||||||||||||||| ||||| |||||     
T  26070151 gtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttccatggcc 26070052  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||| | |||   | | |||||||||| ||||||| ||| |||  |||||||||||| ||    |||||||||||| | |||||||| |||||||    
T  26070051 ttgacaagtttgggtgtgatttcatctcctctttcaagatcattatcatcaatgaaagtacaaattcccttgtcaatgagagccttatagagat 26069958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 28185494 - 28185329
Alignment:
Q  20 aatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgagt 119  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||| |||||||| || || ||||| ||||||||||||||||||||||| |||   |||    
T  28185494 aatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacgggaatgaaaatcctagactcttcaatggccttgaaaagt 28185395  T
Q  120 gatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtca 185  Q
    |||||| | ||||| || |||| |||||| || |  ||||| ||||||||  ||||||||||||||    
T  28185394 gatgatgttatttcttcacctccttgaagctctctgtcatccatgaaggttcggattcccttgtca 28185329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 28139669 - 28139485
Alignment:
Q  20 aatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgagt 119  Q
    ||||||||||||||||| |||||| ||||| |||||||||||||||||||| ||||||||||| || ||||||||||| ||||||||||| ||  |||||    
T  28139669 aatgatgtggacaagttcgtccaagcaaaacgaagaagaggcatagttgatggaaaacacagggatgaaaatcctagattcttcaatggcttttacgagt 28139570  T
Q  120 gatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    || | |   ||||| || |||| |||||| || | ||||||||| || |||||||||||   ||||  |||||| ||||||||||    
T  28139569 gacggtgatatttcgtcacctccttgaagctccctatcatcaataaaagtgtggattccacagtcacgaagagctttgtagagat 28139485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 28242939 - 28242771
Alignment:
Q  13 agcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcatt 112  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||||||||||| ||    
T  28242939 agcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggcctt 28242840  T
Q  113 gtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattccctt 181  Q
    |   ||||||| | | ||||  || |||| | ||||||| |  ||||||||||||||| | ||||||||    
T  28242839 gaaaagtgatggtgttattttgtcacctcctggaagttctctgtcatcaatgaaggtgcgaattccctt 28242771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 174
Target Start/End: Complemental strand, 28150072 - 28149912
Alignment:
Q  13 agcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcatt 112  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||||| | |||||||||||| || |  ||||| |||||||| |||||||||||||| ||    
T  28150072 agcagtgaataatgtggacaagttcgtccaaacaaaatgaagaagaagtatagttgatagagaagattggaatgaaaatcctggactcttcaatggcctt 28149973  T
Q  113 gtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtgga 174  Q
    |  |||||||| | ||||||| ||||||| || ||| ||   ||||||||||||||||||||    
T  28149972 g-agagtgatggtgtgatttcgtcccctcgttaaagctccgtatcatcaatgaaggtgtgga 28149912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 164
Target Start/End: Original strand, 25506978 - 25507112
Alignment:
Q  30 acaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgagtgatgatttga 129  Q
    |||||||  ||||||||||||   ||||||||||||||||||||||  || ||||||||||||||||| |||||||||||  || ||| ||||| | |||    
T  25506978 acaagttcctccaaacaaaattttgaagaggcatagttgatagaaagaaccggaataaaaatcctagattcttcaatggcgatgacgactgatggtgtga 25507077  T
Q  130 tttcatcccctctttgaagttcacaatcatcaatg 164  Q
    ||||||| |||||||  || |||||||||||||||    
T  25507078 tttcatctcctcttttcagatcacaatcatcaatg 25507112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 170
Target Start/End: Original strand, 26341992 - 26342143
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    |||||||||||||||||| |||||||||||| |||||||| ||||||||||| || || |  ||||| |||||||| |||||||||||||| ||| | ||    
T  26341992 gaatgatgtggacaagttcgtccaaacaaaacgaagaagaagcatagttgattgagaaaattggaatgaaaatcctggactcttcaatggctttgacaag 26342091  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtg 170  Q
    ||||  | ||||||  || ||||  ||||| || | ||||||||||||||||    
T  26342092 tgattgtgtgattttgtcacctccatgaagctccctatcatcaatgaaggtg 26342143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 28297765 - 28297859
Alignment:
Q  13 agcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatg 107  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||| ||||| ||| |||| || |||||||| |||||||||| ||||||||||    
T  28297765 agcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattggtagataagacaggaatgaaaatcctagtctcttcaatg 28297859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 28514308 - 28514214
Alignment:
Q  13 agcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatg 107  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||| ||||| ||| |||| || |||||||| |||||||||| ||||||||||    
T  28514308 agcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattggtagataagacaggaatgaaaatcctagtctcttcaatg 28514214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 28325616 - 28325520
Alignment:
Q  13 agcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggc 109  Q
    ||||| |||| |||||||||||||  ||||| ||||| |||||||| ||||| |||||||| || | |||||| |||||||||||||||||||||||    
T  28325616 agcagtgaataatgtggacaagttcatccaagcaaaaggaagaagaagcataattgatagacaaaataggaatgaaaatcctagactcttcaatggc 28325520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 2184417 - 2184327
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggc 109  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||  | || || ||||| || ||||| || ||||||||||||||    
T  2184417 gaatgatgtggacaagttcgtccaaacaaaatgaagaagaagcatagttctttgagaaaacagggatgaaaattctggactcttcaatggc 2184327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 26937219 - 26937160
Alignment:
Q  23 gatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacagg 82  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||| || |||||    
T  26937219 gatgtggacaagttcgtccaaacaaaatgaagaagtggcatagttgatagagaatacagg 26937160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 27427656 - 27427751
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaat 106  Q
    ||||||| |||||||||||||||||  |||||||||| |||||||||| |||||||||  |||||| |  ||||| |||||||| || ||||||||    
T  27427656 gtagcagtgaatgatgtggacaagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 27427751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 26975181 - 26975134
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagt 66  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||    
T  26975181 gaatgatgtggacaagttcgtccaaacaaaatgaagaagaagcatagt 26975134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 28098427 - 28098517
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggc 109  Q
    ||||||||||||||||||  |||||||||||  ||||||| ||||||||  |||| || || ||||| |||||||| |||||||| |||||    
T  28098427 gaatgatgtggacaagttcatccaaacaaaacaaagaagaagcatagttcttagagaagaccggaattaaaatcctggactcttcgatggc 28098517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 26848789 - 26848604
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    |||||||||||||||||| |||||||||||| ||||||| |||||||||   ||| || ||| ||||  ||||||| || |||||||||   |||  |||    
T  26848789 gaatgatgtggacaagttcgtccaaacaaaacgaagaagtggcatagttctcagagaatacaagaatggaaatcctcgagtcttcaatgttcttgaggag 26848690  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
     || | | |||| ||||| || || ||||| ||    ||||||||||||||  ||||||| ||||||| |||||| || |||||||    
T  26848689 cgaaggtgtgatctcatcaccactctgaagatccttgtcatcaatgaaggttcggattccattgtcagaaagagctttatagagat 26848604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 2185027 - 2184980
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagt 66  Q
    ||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  2185027 gaatgatatggacaagttcgtccaaacaaaatgaagaagaagcatagt 2184980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 25071788 - 25071741
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagt 66  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  25071788 gaatgatgtggacaagttcgtctaaacaaaatgaagaagaagcatagt 25071741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 27665312 - 27665358
Alignment:
Q  156 tcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagag 202  Q
    ||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  27665312 tcatcaatgaaggtgtggattcctttgtcagaaagagccttatagag 27665358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 27214543 - 27214498
Alignment:
Q  22 tgatgtggacaagttggtccaaacaaaatgaagaagaggcatagtt 67  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||    
T  27214543 tgatgtggacaagttcgtccaaacaaaatgaagaagtagcatagtt 27214498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 27234685 - 27234730
Alignment:
Q  22 tgatgtggacaagttggtccaaacaaaatgaagaagaggcatagtt 67  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||    
T  27234685 tgatgtggacaagttcgtccaaacaaaatgaagaagtagcatagtt 27234730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 178
Target Start/End: Original strand, 26893549 - 26893688
Alignment:
Q  39 tccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgagtgatgatttgatttcatccc 138  Q
    ||||||||||||  |||||| |||||||||||||| |  || |||||  | ||| ||||||||||||| || |||   ||||||| |  |||||| || |    
T  26893549 tccaaacaaaatatagaagaagcatagttgatagagaggactggaatgtatatcatagactcttcaattgccttgataagtgatggtgagatttcgtcac 26893648  T
Q  139 ctctttgaagttcacaatcatcaatgaaggtgtggattcc 178  Q
    |||| ||||| ||   |||||||||||||||||| |||||    
T  26893649 ctctatgaagctctgtatcatcaatgaaggtgtgaattcc 26893688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 26949790 - 26949745
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcata 64  Q
    ||||||| |||||||||| ||| ||||||||||||||||| |||||    
T  26949790 gaatgatatggacaagttcgtctaaacaaaatgaagaagaagcata 26949745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 29826048 - 29825971
Alignment:
Q  127 tgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||||||| |||||||||||||| ||    ||||||||||||||| | |||  ||||||||| ||||| ||||||||||    
T  29826048 tgatttcgtcccctctttgaagctctttgtcatcaatgaaggtgcgaattttcttgtcagttagagctttgtagagat 29825971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 27665175 - 27665223
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagtt 67  Q
    ||||||||||||||||||  || ||||||||||||||||  ||||||||    
T  27665175 gaatgatgtggacaagttcatctaaacaaaatgaagaagtagcatagtt 27665223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 3471 - 3665
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatag-ttgatagaaaacacaggaataaaaatcctagactcttcaatggc 109  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||    
T  3471 gtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcataggttgatagaaaacacaggaataaaaatcctagattcatcaatggc 3570  T
Q  110 attgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
     |||  |||||||| | |||||||||| ||||||||||| |||   |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3571 cttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagat 3665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 14406 - 14598
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||| ||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||     
T  14406 gtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaa-aggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggcc 14504  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    |||  |||||||| | |||||||||| ||||||||||| |||   |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14505 ttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagat 14598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 106; Significance: 3e-53; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 4721 - 4914
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggca 110  Q
    ||||||| |||| ||||||||||||| |||||||||||| |||||| ||||||||  |||||||||||||||||||||||||||||| || ||||||||     
T  4721 gtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaaaaggcatagaagatagaaaacacaggaataaaaatcctagattcatcaatggcc 4820  T
Q  111 ttgtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    |||  ||| |||| | |||||||||| ||||||||||| |||   |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  4821 ttgcggagggatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagat 4914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 204
Target Start/End: Original strand, 13690 - 13875
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    |||| ||||| ||||||| |||||| ||||||   |||| ||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |||  |||    
T  13690 gaataatgtgaacaagttcgtccaagcaaaattttgaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggag 13789  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||||| | |||||||||| ||||||||||| |||   |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  13790 tgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagat 13875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 7654 - 7469
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    |||| ||||| ||||||| |||||| ||||||   |||| ||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |||  |||    
T  7654 gaataatgtgaacaagttcgtccaagcaaaattttgaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggag 7555  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    ||||| | |||||||||| ||||||||||| |||   |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  7554 tgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagat 7469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 54 - 204
Target Start/End: Original strand, 10 - 160
Alignment:
Q  54 gaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgagtgatgatttgatttcatcccctctttgaagttcac 153  Q
    |||| ||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |||  |||||||| | |||||||||| ||||||||||| |||     
T  10 gaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcat 109  T
Q  154 aatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
      |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  110 tgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagat 160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 87; Significance: 7e-42; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 34860 - 34690
Alignment:
Q  13 agcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcatt 112  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||||||||||| ||    
T  34860 agcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggcctt 34761  T
Q  113 gtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgt 183  Q
    |   ||||||| | | |||||||| |||| |||||| || |  ||||||||||||||||||||||||||||    
T  34760 gaaaagtgatggtgttatttcatctcctccttgaagctccctgtcatcaatgaaggtgtggattcccttgt 34690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 27577 - 27415
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||| |||||||| || |||||||| ||||||||||| ||||||||| | |||   ||    
T  27577 gaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagattcttcaatgaccttgaaaag 27478  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattccctt 181  Q
    ||||||| | |||||||| |||| |||||| || | |||||||| ||| ||||| ||||||||    
T  27477 tgatgatgttatttcatcacctccttgaagctctctatcatcaaagaatgtgtgaattccctt 27415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 43101 - 42933
Alignment:
Q  13 agcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcatt 112  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||||||||||| ||    
T  43101 agcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggcctt 43002  T
Q  113 gtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattccctt 181  Q
    |   ||||||| | | ||||  || |||| | ||||||| |  ||||||||||||||| | ||||||||    
T  43001 gaaaagtgatggtgttattttgtcacctcctggaagttctctgtcatcaatgaaggtgcgaattccctt 42933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 116931 - 116835
Alignment:
Q  13 agcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggc 109  Q
    ||||| |||| |||||||||||||  ||||| ||||| |||||||| ||||| |||||||| || | |||||| |||||||||||||||||||||||    
T  116931 agcagtgaataatgtggacaagttcatccaagcaaaaggaagaagaagcataattgatagacaaaataggaatgaaaatcctagactcttcaatggc 116835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 204
Target Start/End: Original strand, 58334 - 58525
Alignment:
Q  13 agcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcatt 112  Q
    ||||| |||||||||||||||||| || ||| |||||||||||||| |||||||||||||| || || ||||| |||||||||||||||| |||||| ||    
T  58334 agcagtgaatgatgtggacaagttcgttcaagcaaaatgaagaagaagcatagttgatagacaagacgggaatgaaaatcctagactctttaatggcctt 58433  T
Q  113 gtcgagtgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 204  Q
    |   ||||||| | | ||||| || |||| |||||| || |  ||||| ||||||||  ||||||||||||||  ||||||  |||||||||    
T  58434 gaaaagtgatggtgttatttcgtcacctccttgaagctctctgtcatccatgaaggttcggattcccttgtcacaaagagctctgtagagat 58525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 3279817 - 3279666
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgag 118  Q
    |||||||||||||||||| |||||||||||||  |||||| |||||||||||||| || || |||||||||||| | |||||||| ||||| ||| | ||    
T  3279817 gaatgatgtggacaagttcgtccaaacaaaatatagaagaagcatagttgatagagaagaccggaataaaaatcatggactcttcgatggccttgacaag 3279718  T
Q  119 tgatgatttgatttcatcccctctttgaagttcacaatcatcaatgaaggtg 170  Q
    ||||  | |||||||||| ||||  ||||| || | ||||||||||||||||    
T  3279717 tgattgtgtgatttcatcacctccatgaagctccctatcatcaatgaaggtg 3279666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 17993742 - 17993789
Alignment:
Q  19 gaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagt 66  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  17993742 gaatgatgtggacaagttcgtctaaacaaaatgaagaagaagcatagt 17993789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 59707 - 59612
Alignment:
Q  11 gtagcagagaatgatgtggacaagttggtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaat 106  Q
    ||||||| |||||||||||||||||  |||||||||| |||||||||| |||||||||  |||||| |  ||||| |||||||| || ||||||||    
T  59707 gtagcagtgaatgatgtggacaagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 59612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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