View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9366_low_68 (Length: 370)

Name: NF9366_low_68
Description: NF9366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9366_low_68
NF9366_low_68
[»] chr7 (19 HSPs)
chr7 (14-246)||(46944124-46944355)
chr7 (310-356)||(16778507-16778553)
chr7 (310-356)||(28061729-28061775)
chr7 (310-356)||(36623310-36623356)
chr7 (310-356)||(38852061-38852107)
chr7 (310-356)||(41897990-41898036)
chr7 (310-356)||(47156029-47156075)
chr7 (310-354)||(46103579-46103623)
chr7 (310-356)||(20885105-20885151)
chr7 (314-356)||(25566761-25566803)
chr7 (310-356)||(40090132-40090178)
chr7 (310-356)||(42877388-42877434)
chr7 (310-356)||(42890557-42890603)
chr7 (310-356)||(48602438-48602484)
chr7 (313-356)||(36585114-36585157)
chr7 (310-356)||(7457935-7457981)
chr7 (314-356)||(40256063-40256105)
chr7 (310-352)||(46322183-46322225)
chr7 (310-354)||(41088589-41088633)
[»] chr6 (15 HSPs)
chr6 (310-356)||(32414893-32414939)
chr6 (310-356)||(18668902-18668948)
chr6 (310-356)||(19088172-19088218)
chr6 (310-356)||(32671818-32671864)
chr6 (310-352)||(4147933-4147975)
chr6 (310-356)||(6563228-6563274)
chr6 (310-356)||(24624155-24624201)
chr6 (310-352)||(25476026-25476068)
chr6 (310-356)||(16193052-16193098)
chr6 (310-356)||(17213998-17214044)
chr6 (314-356)||(22054778-22054820)
chr6 (315-356)||(3989477-3989518)
chr6 (315-352)||(15383148-15383185)
chr6 (310-343)||(32420747-32420780)
chr6 (316-352)||(31569244-31569280)
[»] chr2 (10 HSPs)
chr2 (313-356)||(19262685-19262728)
chr2 (310-356)||(2183171-2183217)
chr2 (310-356)||(5404998-5405044)
chr2 (310-356)||(8042236-8042282)
chr2 (310-356)||(19141280-19141326)
chr2 (310-356)||(39358148-39358194)
chr2 (310-356)||(7608051-7608097)
chr2 (310-356)||(33607379-33607424)
chr2 (314-356)||(44365163-44365205)
chr2 (315-356)||(6223073-6223114)
[»] scaffold0022 (1 HSPs)
scaffold0022 (310-356)||(100861-100907)
[»] chr8 (16 HSPs)
chr8 (310-356)||(616785-616831)
chr8 (310-356)||(623178-623224)
chr8 (310-356)||(42587462-42587508)
chr8 (311-356)||(3100709-3100754)
chr8 (312-356)||(32998454-32998498)
chr8 (313-356)||(14237285-14237328)
chr8 (310-356)||(8394348-8394394)
chr8 (310-356)||(18044427-18044473)
chr8 (310-356)||(36642073-36642119)
chr8 (314-356)||(40494390-40494432)
chr8 (315-356)||(35403523-35403564)
chr8 (310-356)||(132019-132065)
chr8 (314-356)||(2766262-2766304)
chr8 (310-356)||(13217235-13217281)
chr8 (310-356)||(24524102-24524148)
chr8 (315-356)||(38957177-38957218)
[»] chr5 (8 HSPs)
chr5 (310-356)||(978079-978125)
chr5 (310-356)||(8086244-8086290)
chr5 (310-356)||(40156200-40156246)
chr5 (313-355)||(14634372-14634414)
chr5 (310-356)||(9050779-9050825)
chr5 (310-352)||(18094299-18094341)
chr5 (310-356)||(24992352-24992398)
chr5 (310-356)||(33387222-33387268)
[»] chr4 (17 HSPs)
chr4 (310-356)||(2760941-2760987)
chr4 (310-356)||(26169988-26170034)
chr4 (310-356)||(29830345-29830391)
chr4 (310-356)||(35381108-35381154)
chr4 (310-356)||(38416864-38416910)
chr4 (310-356)||(55209788-55209834)
chr4 (310-356)||(35686375-35686421)
chr4 (310-356)||(38716889-38716935)
chr4 (318-356)||(12240392-12240430)
chr4 (310-356)||(17610282-17610328)
chr4 (310-356)||(43967725-43967771)
chr4 (310-356)||(44232291-44232337)
chr4 (310-356)||(47386500-47386546)
chr4 (310-356)||(54330904-54330950)
chr4 (315-356)||(25918210-25918251)
chr4 (311-356)||(55191827-55191872)
chr4 (310-354)||(19433578-19433622)
[»] chr3 (14 HSPs)
chr3 (310-356)||(13499549-13499595)
chr3 (310-356)||(19823902-19823948)
chr3 (310-356)||(27010688-27010734)
chr3 (310-356)||(42490410-42490456)
chr3 (310-356)||(42761697-42761743)
chr3 (312-356)||(34912356-34912400)
chr3 (310-356)||(6910336-6910382)
chr3 (310-356)||(20765198-20765244)
chr3 (314-356)||(21797562-21797604)
chr3 (310-356)||(39866355-39866401)
chr3 (310-356)||(21005295-21005341)
chr3 (310-356)||(27334945-27334991)
chr3 (310-356)||(45613575-45613621)
chr3 (310-351)||(33415801-33415842)
[»] chr1 (14 HSPs)
chr1 (310-356)||(6402624-6402670)
chr1 (310-356)||(40771986-40772032)
chr1 (310-356)||(6766374-6766420)
chr1 (310-356)||(11641281-11641327)
chr1 (310-352)||(16120658-16120700)
chr1 (310-356)||(17305956-17306002)
chr1 (310-356)||(30701720-30701766)
chr1 (310-356)||(36399100-36399146)
chr1 (310-356)||(52024028-52024074)
chr1 (310-356)||(24321261-24321307)
chr1 (310-356)||(27292642-27292688)
chr1 (310-356)||(30003535-30003581)
chr1 (310-356)||(36757700-36757746)
chr1 (312-356)||(40977702-40977746)
[»] scaffold0295 (1 HSPs)
scaffold0295 (310-356)||(9374-9420)
[»] scaffold0056 (1 HSPs)
scaffold0056 (310-356)||(70963-71009)
[»] scaffold0003 (1 HSPs)
scaffold0003 (310-356)||(162051-162097)
[»] scaffold0018 (1 HSPs)
scaffold0018 (311-356)||(67983-68028)


Alignment Details
Target: chr7 (Bit Score: 156; Significance: 8e-83; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 46944124 - 46944355
Alignment:
Q  14 agattgaaaaatggtaagcccgttatttattagttagagccaaaatgatcatatgtttgttatttttatgcaaataagtgtccttggaaacttattaaag 113  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  46944124 agattgaaaaatggtaaacccgttatttattagttagagccaaaatgatcatatgtttgttatttttatgcaaataagtttccttggaaacttattaaag 46944223  T
Q  114 agccaaacatgttccctnnnnnnnnnnnnngagcctaacatataactnnnnnnnttgatatttttaaatttcaacacagtttctatatttttatttactg 213  Q
    |||||||||||||||||             |||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  46944224 agccaaacatgttccct-aaaaaaaaaaaagagcctaacatatatctaaaaaaattgatatttttaaatttcaacacagtttctatatttttatttactg 46944322  T
Q  214 acaaggctctagggcacaaggattccaaattaa 246  Q
    |||||||||||||||||||||||||||||||||    
T  46944323 acaaggctctagggcacaaggattccaaattaa 46944355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 16778507 - 16778553
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  16778507 ctccctccgtttcaaaatacatgtccaacttttgcaatgtgcactat 16778553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 28061775 - 28061729
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  28061775 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 28061729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 36623310 - 36623356
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  36623310 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 36623356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 38852107 - 38852061
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  38852107 ctccctccgtttcaaaatacatgtccaatttttccaatgtgcactat 38852061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 41897990 - 41898036
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  41897990 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 41898036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 47156029 - 47156075
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  47156029 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 47156075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 310 - 354
Target Start/End: Complemental strand, 46103623 - 46103579
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcact 354  Q
    |||||||||||||||||||||||||||| |||| |||||||||||    
T  46103623 ctccctccgtttcaaaatacatgtccaatttttacaatgtgcact 46103579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 20885105 - 20885151
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| ||||||| |||||    
T  20885105 ctccctccgtttcaaaatacatgtccaatttttacaatgtggactat 20885151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 356
Target Start/End: Complemental strand, 25566803 - 25566761
Alignment:
Q  314 ctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  25566803 ctccgtttcaaaatacatgtccaatttttacaatgtgcactat 25566761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 40090178 - 40090132
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||| |||||| |||||||| ||||||||||||||||||    
T  40090178 ctccctccgttttaaaatatatgtccaattttttcaatgtgcactat 40090132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 42877388 - 42877434
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||||    
T  42877388 ctccctccgtttcaaaatacatgtccaaattttgtaatgtgcactat 42877434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 42890603 - 42890557
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||| ||||||||||||||||||||||| |||| |||||||||||||    
T  42890603 ctccatccgtttcaaaatacatgtccaatttttgcaatgtgcactat 42890557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 48602438 - 48602484
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||||    
T  48602438 ctccctccgtttcaaaatacatgcccaatttttccaatgtgcactat 48602484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 356
Target Start/End: Original strand, 36585114 - 36585157
Alignment:
Q  313 cctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||    
T  36585114 cctccgtttcaaaatacatatccaatttttgcaatgtgcactat 36585157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 7457981 - 7457935
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||| |||||||||||||||||||| || |||| |||||||||||||    
T  7457981 ctccatccgtttcaaaatacatgtctaagttttgcaatgtgcactat 7457935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 356
Target Start/End: Original strand, 40256063 - 40256105
Alignment:
Q  314 ctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||| |||| |||||||| ||||    
T  40256063 ctccgtttcaaaatacatgtccaatttttgcaatgtgctctat 40256105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 46322225 - 46322183
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgca 352  Q
    |||||||| ||||||||||||||||||| |||| |||||||||    
T  46322225 ctccctccatttcaaaatacatgtccaatttttgcaatgtgca 46322183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 354
Target Start/End: Original strand, 41088589 - 41088633
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcact 354  Q
    |||||||| ||||||||||||||||||| |||| |||| ||||||    
T  41088589 ctccctccatttcaaaatacatgtccaaattttacaatatgcact 41088633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 32414939 - 32414893
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  32414939 ctccctccgtttcaaaatacatgtccaattttttcaatgtgcactat 32414893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 18668948 - 18668902
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  18668948 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 18668902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 19088218 - 19088172
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  19088218 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 19088172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 32671818 - 32671864
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  32671818 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 32671864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 4147933 - 4147975
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgca 352  Q
    |||||||||||||||||||||||||||| |||| |||||||||    
T  4147933 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgca 4147975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 6563228 - 6563274
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||||    
T  6563228 ctccctccgtttcaaaatacatgttcaatttttgcaatgtgcactat 6563274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 24624201 - 24624155
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||||    
T  24624201 ctccctccgtttcaaaatacatgttcaatttttgcaatgtgcactat 24624155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 25476068 - 25476026
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgca 352  Q
    |||||||||||||||||||||||||||| |||| |||||||||    
T  25476068 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgca 25476026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 16193098 - 16193052
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||| ||| ||||||||||||||| |||| |||||||||||||    
T  16193098 ctccctccattttaaaatacatgtccaatttttgcaatgtgcactat 16193052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 17214044 - 17213998
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||| |||||||||||||||| || |||| |||||||||||||    
T  17214044 ctccctccatttcaaaatacatgtctaatttttgcaatgtgcactat 17213998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 356
Target Start/End: Original strand, 22054778 - 22054820
Alignment:
Q  314 ctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||| |||| |||| ||||||||    
T  22054778 ctccgtttcaaaatacatgtccaatttttgcaatatgcactat 22054820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 356
Target Start/End: Complemental strand, 3989518 - 3989477
Alignment:
Q  315 tccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||| |||||||||||||||| |||| |||||||||||||    
T  3989518 tccgttacaaaatacatgtccaatttttgcaatgtgcactat 3989477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 352
Target Start/End: Complemental strand, 15383185 - 15383148
Alignment:
Q  315 tccgtttcaaaatacatgtccaactttttcaatgtgca 352  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  15383185 tccgtttcaaaatacatgtccaatttttgcaatgtgca 15383148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 343
Target Start/End: Complemental strand, 32420780 - 32420747
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaacttttt 343  Q
    |||||||||||||||||||||||||||| |||||    
T  32420780 ctccctccgtttcaaaatacatgtccaatttttt 32420747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 352
Target Start/End: Complemental strand, 31569280 - 31569244
Alignment:
Q  316 ccgtttcaaaatacatgtccaactttttcaatgtgca 352  Q
    |||||||||||||||||||||| |||| |||||||||    
T  31569280 ccgtttcaaaatacatgtccaatttttgcaatgtgca 31569244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 313 - 356
Target Start/End: Original strand, 19262685 - 19262728
Alignment:
Q  313 cctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  19262685 cctccgtttcaaaatacatgtccaattttttcaatgtgcactat 19262728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 2183217 - 2183171
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  2183217 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 2183171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 5404998 - 5405044
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  5404998 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 5405044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 8042282 - 8042236
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  8042282 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 8042236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 19141326 - 19141280
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  19141326 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 19141280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 39358148 - 39358194
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  39358148 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 39358194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 7608051 - 7608097
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||| ||||||||||||||||||||||| |||| |||||||||||||    
T  7608051 ctccatccgtttcaaaatacatgtccaatttttgcaatgtgcactat 7608097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 33607379 - 33607424
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||| ||||||||||||||||||| |||| |||||||||||||    
T  33607379 ctccctcc-tttcaaaatacatgtccaatttttacaatgtgcactat 33607424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 356
Target Start/End: Original strand, 44365163 - 44365205
Alignment:
Q  314 ctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||| |||| |||| ||||||||    
T  44365163 ctccgtttcaaaatacatgtccaatttttgcaatatgcactat 44365205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 356
Target Start/End: Original strand, 6223073 - 6223114
Alignment:
Q  315 tccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||||||||||||||||| ||| |||| |||||||||||||    
T  6223073 tccgtttcaaaatacatgttcaatttttgcaatgtgcactat 6223114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 100907 - 100861
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||    
T  100907 ctccctccgtttcaaaatacatgttcaacttttgcaatgtgcactat 100861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 616785 - 616831
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  616785 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 616831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 623178 - 623224
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  623178 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 623224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 42587508 - 42587462
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  42587508 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 42587462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 356
Target Start/End: Complemental strand, 3100754 - 3100709
Alignment:
Q  311 tccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||    
T  3100754 tccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 3100709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 32998454 - 32998498
Alignment:
Q  312 ccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||| |||| |||||||||||||    
T  32998454 ccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 32998498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 313 - 356
Target Start/End: Original strand, 14237285 - 14237328
Alignment:
Q  313 cctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  14237285 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 14237328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 8394348 - 8394394
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||||||||||||||||||||||| || |||| |||||||||||||    
T  8394348 ctccctccgtttcaaaatacatgtctaatttttgcaatgtgcactat 8394394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 18044427 - 18044473
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||| ||||||||||||||||||||||| |||| |||||||||||||    
T  18044427 ctccatccgtttcaaaatacatgtccaatttttgcaatgtgcactat 18044473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 36642119 - 36642073
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||||    
T  36642119 ctccctccgtttcaaaatacatgttcaatttttgcaatgtgcactat 36642073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 356
Target Start/End: Original strand, 40494390 - 40494432
Alignment:
Q  314 ctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  40494390 ctccgtttcaaaatacatgtccaatttttccaatgtgcactat 40494432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 356
Target Start/End: Original strand, 35403523 - 35403564
Alignment:
Q  315 tccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||||||||||||||||||||| |||| |||||||||||||    
T  35403523 tccgtttcaaaatacatgtccaatttttgcaatgtgcactat 35403564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 132019 - 132065
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||    
T  132019 ctccctccgtttcaaaatacatgtccactttttgcaacgtgcactat 132065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 356
Target Start/End: Complemental strand, 2766304 - 2766262
Alignment:
Q  314 ctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||| ||||| |||| |||||||||||||    
T  2766304 ctccgtttcaaaatacatatccaatttttgcaatgtgcactat 2766262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 13217281 - 13217235
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||| ||||||||||||||||||||||| |||| |||||| ||||||    
T  13217281 ctccttccgtttcaaaatacatgtccaatttttgcaatgtacactat 13217235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 24524102 - 24524148
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||| ||||||||||||||||||| ||| |||| |||||||||||||    
T  24524102 ctccttccgtttcaaaatacatgttcaaattttgcaatgtgcactat 24524148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 356
Target Start/End: Original strand, 38957177 - 38957218
Alignment:
Q  315 tccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||| |||||||| |||| |||||||||||||    
T  38957177 tccgtttcaaaatatatgtccaatttttgcaatgtgcactat 38957218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 978079 - 978125
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  978079 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 978125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 8086290 - 8086244
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  8086290 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 8086244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 40156200 - 40156246
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  40156200 ctccctccgtttcaaaatacatatccaacttttgcaatgtgcactat 40156246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 313 - 355
Target Start/End: Complemental strand, 14634414 - 14634372
Alignment:
Q  313 cctccgtttcaaaatacatgtccaactttttcaatgtgcacta 355  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  14634414 cctccgtttcaaaatacatgtccaatttttgcaatgtgcacta 14634372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 9050825 - 9050779
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||| ||| |||| ||| |||||||||    
T  9050825 ctccctccgtttcaaaatacatgttcaatttttgcaacgtgcactat 9050779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 18094341 - 18094299
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgca 352  Q
    |||||||||||||||||||||||| ||| |||| |||||||||    
T  18094341 ctccctccgtttcaaaatacatgttcaatttttgcaatgtgca 18094299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 24992398 - 24992352
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||  | |||| |||||||||||||    
T  24992398 ctccctccgtttcaaaatacatgtcatagttttacaatgtgcactat 24992352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 33387222 - 33387268
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||| ||| ||||||||||||||| |||| |||||||||||||    
T  33387222 ctccctccattttaaaatacatgtccaatttttgcaatgtgcactat 33387268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 2760987 - 2760941
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  2760987 ctccctccgtttcaaaatacatgtccaatttttacaatgtgcactat 2760941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 26169988 - 26170034
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  26169988 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 26170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 29830345 - 29830391
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||    
T  29830345 ctccctccgtttcaaaatacatgtccaatttttttaatgtgcactat 29830391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 35381154 - 35381108
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  35381154 ctccctccgtttcaaaatacatgtccaatttttacaatgtgcactat 35381108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 38416910 - 38416864
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  38416910 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 38416864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 55209834 - 55209788
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  55209834 ctccctccgtttcaaaatacatgtccaatttttccaatgtgcactat 55209788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 35686375 - 35686421
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||||    
T  35686375 ctccctcagtttcaaaatacatgtccaatttttgcaatgtgcactat 35686421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 38716889 - 38716935
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||||    
T  38716889 ctccctctgtttcaaaatacatgtccaatttttgcaatgtgcactat 38716935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 356
Target Start/End: Complemental strand, 12240430 - 12240392
Alignment:
Q  318 gtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  12240430 gtttcaaaatacatgtccaatttttacaatgtgcactat 12240392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 17610282 - 17610328
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||| ||||||||||||||| |||| |||| ||||||||    
T  17610282 ctccctccgttttaaaatacatgtccaatttttgcaatatgcactat 17610328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 43967725 - 43967771
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||| ||||||||||||||||||| ||| |||| |||||||||||||    
T  43967725 ctccttccgtttcaaaatacatgttcaatttttgcaatgtgcactat 43967771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 44232337 - 44232291
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||| |||||||||||||||||||| || |||| |||||||||||||    
T  44232337 ctccatccgtttcaaaatacatgtctaatttttgcaatgtgcactat 44232291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 47386546 - 47386500
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||  ||||  ||||||||||||    
T  47386546 ctccctccgtttcaaaatacatgtccactttttggaatgtgcactat 47386500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 54330950 - 54330904
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||||||||||| |||||||||||||| |||| |||||||| ||||    
T  54330950 ctccctccgtttcgaaatacatgtccaatttttgcaatgtgcgctat 54330904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 356
Target Start/End: Original strand, 25918210 - 25918251
Alignment:
Q  315 tccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||||| ||||||||||||||| |||| |||||||||||||    
T  25918210 tccgttttaaaatacatgtccaatttttgcaatgtgcactat 25918251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 55191827 - 55191872
Alignment:
Q  311 tccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||| |||| ||| |||| |||||||||||||    
T  55191827 tccctccgtttcaaaatatatgttcaatttttgcaatgtgcactat 55191872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 354
Target Start/End: Complemental strand, 19433622 - 19433578
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcact 354  Q
    ||||||| |||||||||||||||| ||| |||| |||||||||||    
T  19433622 ctccctctgtttcaaaatacatgttcaatttttgcaatgtgcact 19433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 13499595 - 13499549
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  13499595 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 13499549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 19823902 - 19823948
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  19823902 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 19823948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 27010734 - 27010688
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  27010734 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 27010688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 42490456 - 42490410
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  42490456 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 42490410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 42761743 - 42761697
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  42761743 ctccctccgtttcaaaatacatgtccaatttttacaatgtgcactat 42761697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 356
Target Start/End: Complemental strand, 34912400 - 34912356
Alignment:
Q  312 ccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||| |||| |||||||||||||    
T  34912400 ccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 34912356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 6910336 - 6910382
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  6910336 ctccccccgtttcaaaatacatgtccaacttttacaatgtacactat 6910382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 20765198 - 20765244
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||| ||||||||||||||| |||| |||||||||||||    
T  20765198 ctccctccgttttaaaatacatgtccaatttttgcaatgtgcactat 20765244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 356
Target Start/End: Original strand, 21797562 - 21797604
Alignment:
Q  314 ctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  21797562 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 21797604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 39866401 - 39866355
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||| ||||||||||||||| |||| |||||||||||||    
T  39866401 ctccctccgttttaaaatacatgtccaatttttgcaatgtgcactat 39866355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 21005295 - 21005341
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||| ||| |||| ||| |||||||||    
T  21005295 ctccctccgtttcaaaatacatgttcaatttttgcaacgtgcactat 21005341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 27334991 - 27334945
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||| ||||||||||||||||||| ||| |||| |||||||||||||    
T  27334991 ctccttccgtttcaaaatacatgttcaatttttgcaatgtgcactat 27334945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 45613575 - 45613621
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||| ||||||||||||| ||||||||| |||| |||||||||||||    
T  45613575 ctccatccgtttcaaaattcatgtccaatttttgcaatgtgcactat 45613621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 351
Target Start/End: Original strand, 33415801 - 33415842
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgc 351  Q
    ||||||| |||||||||||||||||||| |||| ||||||||    
T  33415801 ctccctctgtttcaaaatacatgtccaatttttgcaatgtgc 33415842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 6402670 - 6402624
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  6402670 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 6402624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 40772032 - 40771986
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  40772032 ctccctccgtttcaaaatacatgtccaatttttacaatgtgcactat 40771986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 6766374 - 6766420
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||||    
T  6766374 ctccctccgtttcaaaatacatgttcaatttttgcaatgtgcactat 6766420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 11641327 - 11641281
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||| ||||||||||||||||||| |||| |||||||||||||    
T  11641327 ctccctccatttcaaaatacatgtccaatttttgcaatgtgcactat 11641281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 16120700 - 16120658
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgca 352  Q
    |||||||||||||||||||||||||||| |||| |||||||||    
T  16120700 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgca 16120658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 17305956 - 17306002
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||| ||||||||||||||| |||| |||||||||||||    
T  17305956 ctccctccgttttaaaatacatgtccaatttttgcaatgtgcactat 17306002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 30701720 - 30701766
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||||    
T  30701720 ctccctccgtttcaaaatacatgtccaatttttgtaatgtgcactat 30701766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 36399100 - 36399146
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||| ||||||||||||||||||||||| |||| |||||||||||||    
T  36399100 ctccatccgtttcaaaatacatgtccaatttttgcaatgtgcactat 36399146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 52024028 - 52024074
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||||    
T  52024028 ctccctccgtttcaaaatacatgttcaatttttgcaatgtgcactat 52024074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 24321261 - 24321307
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||||||| |||||||||||| || |||| |||||||||||||    
T  24321261 ctccctccgttttaaaatacatgtcgaatttttgcaatgtgcactat 24321307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 27292642 - 27292688
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||||||||||||||||| |||||||| |||| |||| ||||||||    
T  27292642 ctccctccgtttcaaaatatatgtccaatttttgcaatctgcactat 27292688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 30003535 - 30003581
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  30003535 ctccatccgtttcaaaatacatgtccaatttttgtaatgtgcactat 30003581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 36757746 - 36757700
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||| ||| ||||||||||||||||||| |||| |||||||||||||    
T  36757746 ctccatccatttcaaaatacatgtccaatttttgcaatgtgcactat 36757700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 356
Target Start/End: Complemental strand, 40977746 - 40977702
Alignment:
Q  312 ccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||||||| |||||||||||||||| |||| ||||||| |||||    
T  40977746 ccctccgttgcaaaatacatgtccaatttttgcaatgtgtactat 40977702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 9374 - 9420
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||||||||||||||||||||||| || |||| |||||||||||||    
T  9374 ctccctccgtttcaaaatacatgtctaatttttgcaatgtgcactat 9420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 70963 - 71009
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    |||||||| ||||||||||||||||||| |||| |||| ||||||||    
T  70963 ctccctccatttcaaaatacatgtccaatttttgcaatatgcactat 71009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 162097 - 162051
Alignment:
Q  310 ctccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||||||||||||||||||||||| || ||||  ||||||||||||    
T  162097 ctccctccgtttcaaaatacatgtctaatttttgtaatgtgcactat 162051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Complemental strand, 68028 - 67983
Alignment:
Q  311 tccctccgtttcaaaatacatgtccaactttttcaatgtgcactat 356  Q
    ||||| ||||||||||||||||||||| ||||  ||||||||||||    
T  68028 tccctacgtttcaaaatacatgtccaatttttgaaatgtgcactat 67983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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