View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9366_low_87 (Length: 336)
Name: NF9366_low_87
Description: NF9366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9366_low_87 |
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Alignment Details
Target: chr5 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 319
Target Start/End: Original strand, 9702834 - 9703152
Alignment:
| Q |
1 |
tggtactggaaaatgctttctagtgacaggtcctccggtgagtgattcctccatcaattttaacttttcctctctttgaaatctctatcacttcaatcat |
100 |
Q |
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| T |
9702834 |
tggtactggaaaatgctttctagtgacaggtcctccggtgagtgattcctccatcaattttaacttttcctctctttgaaatctctatcacttcaatcat |
9702933 |
T |
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| Q |
101 |
taatcatgattcatataatttattaaaatgattttagggtgtgggaaaaagcactcttattatgagagtcttcgaatccctcaaagcctcaaaccccaca |
200 |
Q |
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| T |
9702934 |
taatcatgattcatataatttattaaaatgattttagggtgtgggaaaaagcactcttattatgagagtcttcgaatccctcaaagcctcaaaccccaca |
9703033 |
T |
|
| Q |
201 |
cttaaggttcagggtttctacacacgtaagcatctcttcctttttccttcacaccatcacttcacaaattcccaaaacttttcattggtttgttttgttt |
300 |
Q |
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||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
9703034 |
cttaaggttcagggtttctacacacgtaagcgtctcttcctctttccttcacaccatcccttcacaaattcccaaaacttttcattggtttgttttgttt |
9703133 |
T |
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| Q |
301 |
gtaggtgaagttagagttg |
319 |
Q |
| |
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||||||||||||||||||| |
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| T |
9703134 |
gtaggtgaagttagagttg |
9703152 |
T |
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