View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9366_low_96 (Length: 319)

Name: NF9366_low_96
Description: NF9366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9366_low_96
NF9366_low_96
[»] chr8 (44 HSPs)
chr8 (20-313)||(17751540-17751830)
chr8 (20-313)||(17760527-17760817)
chr8 (75-147)||(29510233-29510304)
chr8 (20-75)||(17737641-17737696)
chr8 (250-300)||(17737218-17737268)
chr8 (75-140)||(4673354-4673418)
chr8 (75-120)||(15816058-15816103)
chr8 (75-120)||(22652061-22652106)
chr8 (79-147)||(5813640-5813707)
chr8 (76-148)||(24205749-24205820)
chr8 (75-147)||(36450694-36450765)
chr8 (75-149)||(949205-949278)
chr8 (75-141)||(39820482-39820547)
chr8 (75-120)||(8343041-8343086)
chr8 (75-120)||(8343401-8343446)
chr8 (75-120)||(22197671-22197716)
chr8 (75-112)||(26902104-26902141)
chr8 (75-120)||(29447529-29447574)
chr8 (75-119)||(13436910-13436954)
chr8 (23-71)||(15734182-15734230)
chr8 (77-117)||(16987990-16988030)
chr8 (77-141)||(44067580-44067644)
chr8 (74-117)||(16641908-16641951)
chr8 (75-114)||(25566910-25566949)
chr8 (75-118)||(27213601-27213644)
chr8 (75-110)||(31514938-31514973)
chr8 (72-147)||(34450958-34451032)
chr8 (75-113)||(4298830-4298867)
chr8 (74-120)||(11803344-11803390)
chr8 (75-117)||(21465500-21465542)
chr8 (76-118)||(29447040-29447082)
chr8 (80-118)||(31109463-31109501)
chr8 (69-115)||(37283749-37283795)
chr8 (75-120)||(11944750-11944795)
chr8 (75-120)||(12570438-12570483)
chr8 (75-120)||(12570664-12570709)
chr8 (75-120)||(13397625-13397670)
chr8 (75-120)||(18407793-18407838)
chr8 (87-120)||(22943301-22943334)
chr8 (75-120)||(30067968-30068013)
chr8 (75-148)||(38487157-38487230)
chr8 (75-120)||(40064036-40064081)
chr8 (149-197)||(7658441-7658489)
chr8 (151-183)||(39954314-39954346)
[»] chr4 (55 HSPs)
chr4 (75-147)||(53381530-53381602)
chr4 (75-147)||(24343560-24343632)
chr4 (73-147)||(23292924-23292997)
chr4 (75-141)||(18513175-18513241)
chr4 (75-148)||(7012124-7012197)
chr4 (75-120)||(11596297-11596342)
chr4 (74-147)||(28964187-28964259)
chr4 (75-120)||(715545-715590)
chr4 (75-120)||(752871-752916)
chr4 (75-147)||(944602-944674)
chr4 (80-120)||(3712458-3712498)
chr4 (75-147)||(12895214-12895285)
chr4 (75-147)||(34306744-34306815)
chr4 (75-114)||(5775304-5775343)
chr4 (73-120)||(8423656-8423703)
chr4 (76-119)||(14465006-14465049)
chr4 (75-118)||(36635406-36635449)
chr4 (75-118)||(40784029-40784072)
chr4 (78-120)||(28084598-28084640)
chr4 (75-120)||(18966583-18966628)
chr4 (75-120)||(29205542-29205587)
chr4 (75-120)||(37203326-37203371)
chr4 (74-114)||(2054123-2054163)
chr4 (75-147)||(2361915-2361986)
chr4 (76-120)||(3947702-3947746)
chr4 (76-120)||(5922532-5922576)
chr4 (76-120)||(30982808-30982852)
chr4 (76-120)||(40965345-40965389)
chr4 (75-110)||(3064868-3064903)
chr4 (76-111)||(4383449-4383484)
chr4 (77-120)||(22440559-22440602)
chr4 (75-118)||(30094089-30094132)
chr4 (75-114)||(30299009-30299048)
chr4 (75-114)||(30327877-30327916)
chr4 (149-199)||(847927-847977)
chr4 (74-112)||(23386240-23386278)
chr4 (75-113)||(28470446-28470484)
chr4 (151-189)||(35723420-35723458)
chr4 (74-119)||(12884346-12884391)
chr4 (75-120)||(12895055-12895100)
chr4 (75-120)||(16184905-16184950)
chr4 (152-189)||(17345451-17345488)
chr4 (75-120)||(19482753-19482798)
chr4 (79-120)||(27706110-27706151)
chr4 (77-118)||(28000672-28000713)
chr4 (74-147)||(35157924-35157996)
chr4 (75-116)||(42640602-42640643)
chr4 (75-147)||(10133756-10133828)
chr4 (75-135)||(11931350-11931410)
chr4 (75-111)||(18844423-18844459)
chr4 (75-147)||(20521785-20521857)
chr4 (151-199)||(23293021-23293069)
chr4 (74-118)||(25950471-25950515)
chr4 (75-107)||(42015047-42015079)
chr4 (75-147)||(49431074-49431145)
[»] chr1 (64 HSPs)
chr1 (74-147)||(22515826-22515898)
chr1 (75-147)||(31694639-31694710)
chr1 (74-134)||(16812616-16812676)
chr1 (77-147)||(42359391-42359460)
chr1 (75-120)||(6427549-6427594)
chr1 (75-148)||(32899937-32900010)
chr1 (74-147)||(47989556-47989628)
chr1 (75-147)||(1815305-1815376)
chr1 (72-120)||(2218302-2218350)
chr1 (75-120)||(9828129-9828174)
chr1 (75-120)||(21365992-21366037)
chr1 (75-120)||(40917834-40917879)
chr1 (151-199)||(2896156-2896204)
chr1 (75-119)||(22881567-22881611)
chr1 (75-119)||(30359440-30359484)
chr1 (75-147)||(37598879-37598950)
chr1 (74-150)||(38075908-38075984)
chr1 (77-120)||(1486646-1486689)
chr1 (77-120)||(16297223-16297266)
chr1 (75-118)||(22947806-22947849)
chr1 (75-118)||(27965940-27965983)
chr1 (74-120)||(18556384-18556430)
chr1 (74-112)||(35702541-35702579)
chr1 (75-120)||(5944368-5944413)
chr1 (75-120)||(17831462-17831507)
chr1 (75-120)||(29144320-29144365)
chr1 (74-147)||(46348322-46348394)
chr1 (75-120)||(46940748-46940793)
chr1 (75-147)||(6936334-6936406)
chr1 (76-120)||(10233330-10233374)
chr1 (75-147)||(18337377-18337448)
chr1 (75-119)||(36878541-36878585)
chr1 (76-120)||(40258874-40258918)
chr1 (75-147)||(51410073-51410144)
chr1 (74-117)||(113370-113413)
chr1 (76-135)||(2445932-2445991)
chr1 (75-118)||(7918154-7918197)
chr1 (75-118)||(15765834-15765877)
chr1 (75-110)||(17705546-17705581)
chr1 (80-115)||(26830666-26830701)
chr1 (151-190)||(36878446-36878485)
chr1 (72-114)||(398730-398772)
chr1 (75-117)||(5898206-5898248)
chr1 (74-120)||(6574051-6574097)
chr1 (152-194)||(8842750-8842792)
chr1 (151-189)||(17831566-17831604)
chr1 (75-141)||(20157284-20157350)
chr1 (75-141)||(22794018-22794084)
chr1 (75-113)||(34741927-34741965)
chr1 (75-113)||(35919226-35919264)
chr1 (149-199)||(41877503-41877553)
chr1 (74-148)||(42004881-42004954)
chr1 (72-118)||(43113010-43113056)
chr1 (151-217)||(48450622-48450688)
chr1 (75-120)||(1704935-1704980)
chr1 (76-105)||(5927281-5927310)
chr1 (74-111)||(9630560-9630597)
chr1 (79-120)||(48040418-48040459)
chr1 (151-199)||(398800-398848)
chr1 (151-199)||(7918246-7918294)
chr1 (157-217)||(14359562-14359622)
chr1 (90-150)||(19637813-19637872)
chr1 (75-147)||(38078601-38078672)
chr1 (75-111)||(48450550-48450586)
[»] chr3 (46 HSPs)
chr3 (75-150)||(40993275-40993349)
chr3 (74-120)||(34185051-34185097)
chr3 (75-120)||(11610583-11610628)
chr3 (75-147)||(20503513-20503584)
chr3 (75-147)||(55401123-55401194)
chr3 (76-150)||(8789489-8789564)
chr3 (75-120)||(27505325-27505370)
chr3 (75-120)||(40052386-40052431)
chr3 (75-119)||(2408590-2408634)
chr3 (79-119)||(14829776-14829816)
chr3 (77-141)||(24204983-24205047)
chr3 (75-147)||(52369834-52369906)
chr3 (77-120)||(4987222-4987265)
chr3 (75-118)||(14979225-14979268)
chr3 (76-118)||(34910393-34910435)
chr3 (76-146)||(37077418-37077488)
chr3 (75-125)||(49651716-49651766)
chr3 (75-116)||(18427027-18427068)
chr3 (75-148)||(25074841-25074914)
chr3 (75-120)||(41961579-41961624)
chr3 (80-120)||(1509641-1509681)
chr3 (75-111)||(4990912-4990948)
chr3 (151-199)||(5441066-5441114)
chr3 (151-199)||(8383233-8383281)
chr3 (76-120)||(15999951-15999995)
chr3 (75-110)||(8842413-8842448)
chr3 (77-120)||(25775581-25775624)
chr3 (76-107)||(32804485-32804516)
chr3 (74-120)||(3163970-3164016)
chr3 (81-147)||(12704597-12704663)
chr3 (75-113)||(16789103-16789141)
chr3 (75-116)||(3730108-3730149)
chr3 (71-120)||(8039760-8039809)
chr3 (75-147)||(10955000-10955074)
chr3 (74-147)||(21211341-21211414)
chr3 (76-120)||(1389912-1389956)
chr3 (82-150)||(3631729-3631796)
chr3 (148-184)||(8039867-8039903)
chr3 (74-118)||(8101891-8101935)
chr3 (75-115)||(8903514-8903554)
chr3 (75-111)||(11493336-11493372)
chr3 (74-118)||(12083959-12084003)
chr3 (78-110)||(15544768-15544800)
chr3 (75-111)||(21861658-21861694)
chr3 (76-120)||(25211604-25211648)
chr3 (74-118)||(35223014-35223058)
[»] chr7 (48 HSPs)
chr7 (74-148)||(7133211-7133285)
chr7 (75-147)||(24339701-24339772)
chr7 (75-120)||(5409771-5409816)
chr7 (75-147)||(21880200-21880271)
chr7 (69-120)||(6490790-6490841)
chr7 (82-120)||(18215144-18215182)
chr7 (75-120)||(598282-598327)
chr7 (75-120)||(9778579-9778624)
chr7 (75-120)||(43027404-43027449)
chr7 (76-120)||(32287404-32287448)
chr7 (151-217)||(12289071-12289138)
chr7 (76-150)||(20549836-20549909)
chr7 (74-120)||(40287301-40287347)
chr7 (75-120)||(1401097-1401142)
chr7 (75-120)||(1433533-1433578)
chr7 (78-119)||(8842282-8842323)
chr7 (75-120)||(14729777-14729822)
chr7 (75-120)||(29763129-29763174)
chr7 (151-199)||(2425768-2425816)
chr7 (75-147)||(15680857-15680928)
chr7 (150-194)||(22484006-22484050)
chr7 (75-111)||(35862034-35862070)
chr7 (148-199)||(5235962-5236013)
chr7 (75-118)||(21568561-21568604)
chr7 (74-120)||(32093953-32094000)
chr7 (80-139)||(43250059-43250118)
chr7 (74-120)||(17852074-17852120)
chr7 (149-199)||(27945017-27945067)
chr7 (75-113)||(28973881-28973919)
chr7 (151-197)||(29787404-29787450)
chr7 (75-113)||(29812598-29812636)
chr7 (75-109)||(30813882-30813916)
chr7 (151-189)||(32308106-32308144)
chr7 (75-145)||(41229237-41229307)
chr7 (75-112)||(3991395-3991432)
chr7 (75-120)||(21864882-21864927)
chr7 (75-120)||(24105752-24105797)
chr7 (149-182)||(28155563-28155596)
chr7 (75-120)||(40131939-40131984)
chr7 (151-199)||(1433430-1433478)
chr7 (151-199)||(11722133-11722181)
chr7 (80-120)||(13770770-13770810)
chr7 (74-106)||(19213881-19213913)
chr7 (151-199)||(25481878-25481926)
chr7 (74-118)||(25822742-25822786)
chr7 (77-109)||(28943351-28943383)
chr7 (75-119)||(38134335-38134379)
chr7 (75-147)||(38804489-38804561)
[»] chr2 (38 HSPs)
chr2 (77-147)||(2438661-2438730)
chr2 (75-147)||(37419802-37419873)
chr2 (75-118)||(11223793-11223836)
chr2 (69-119)||(44635568-44635618)
chr2 (74-147)||(18840952-18841024)
chr2 (74-125)||(15907850-15907901)
chr2 (74-120)||(38117098-38117144)
chr2 (75-120)||(26769596-26769641)
chr2 (75-147)||(35056927-35056998)
chr2 (74-117)||(21782743-21782786)
chr2 (77-118)||(19942341-19942382)
chr2 (75-120)||(37559051-37559096)
chr2 (75-116)||(39323316-39323357)
chr2 (75-120)||(42511322-42511367)
chr2 (98-150)||(5367237-5367288)
chr2 (80-120)||(23058389-23058429)
chr2 (75-142)||(6180790-6180857)
chr2 (75-118)||(10535685-10535728)
chr2 (75-118)||(12748743-12748786)
chr2 (76-147)||(28596517-28596587)
chr2 (76-118)||(3444827-3444869)
chr2 (75-117)||(18622679-18622721)
chr2 (157-199)||(25080876-25080918)
chr2 (75-113)||(34221463-34221501)
chr2 (69-111)||(34691763-34691805)
chr2 (69-111)||(34714175-34714217)
chr2 (75-116)||(22084756-22084797)
chr2 (76-113)||(23354582-23354619)
chr2 (75-120)||(24975255-24975300)
chr2 (75-120)||(32749754-32749799)
chr2 (75-147)||(15972921-15972992)
chr2 (74-118)||(18631350-18631394)
chr2 (75-111)||(19536361-19536397)
chr2 (151-183)||(21616754-21616786)
chr2 (151-199)||(21782853-21782901)
chr2 (77-113)||(23354926-23354962)
chr2 (75-119)||(30717459-30717503)
chr2 (76-120)||(44860405-44860449)
[»] chr6 (54 HSPs)
chr6 (75-147)||(10339054-10339125)
chr6 (75-150)||(7378024-7378098)
chr6 (74-147)||(28152146-28152218)
chr6 (78-147)||(32978842-32978910)
chr6 (75-111)||(426478-426514)
chr6 (75-147)||(4877991-4878061)
chr6 (75-147)||(9107299-9107370)
chr6 (75-147)||(16766756-16766827)
chr6 (76-120)||(31959224-31959268)
chr6 (75-147)||(34595182-34595253)
chr6 (75-114)||(10770607-10770646)
chr6 (75-118)||(17327590-17327633)
chr6 (74-120)||(7248443-7248489)
chr6 (78-120)||(8389411-8389453)
chr6 (78-120)||(9025448-9025490)
chr6 (77-118)||(5569825-5569866)
chr6 (75-120)||(7938174-7938219)
chr6 (75-120)||(8365448-8365493)
chr6 (75-120)||(8776908-8776953)
chr6 (75-116)||(12236737-12236778)
chr6 (77-118)||(26178620-26178661)
chr6 (76-117)||(31385007-31385048)
chr6 (74-147)||(34446618-34446691)
chr6 (75-120)||(34894968-34895013)
chr6 (75-147)||(8714039-8714110)
chr6 (76-120)||(17841530-17841574)
chr6 (151-194)||(20371145-20371188)
chr6 (74-121)||(34073277-34073324)
chr6 (75-109)||(7723199-7723233)
chr6 (74-120)||(13360312-13360358)
chr6 (74-108)||(32511605-32511639)
chr6 (75-120)||(3209473-3209518)
chr6 (77-150)||(7265535-7265607)
chr6 (75-112)||(8805524-8805561)
chr6 (74-111)||(9997792-9997829)
chr6 (151-184)||(19040343-19040376)
chr6 (75-120)||(25207814-25207859)
chr6 (75-104)||(28919488-28919517)
chr6 (151-217)||(677798-677861)
chr6 (75-111)||(2117139-2117175)
chr6 (75-111)||(5732474-5732510)
chr6 (75-147)||(5970037-5970108)
chr6 (151-199)||(7086771-7086819)
chr6 (151-199)||(8805607-8805655)
chr6 (155-199)||(9027154-9027198)
chr6 (151-199)||(9658855-9658903)
chr6 (75-111)||(10649371-10649407)
chr6 (75-115)||(10842612-10842652)
chr6 (151-199)||(13851712-13851760)
chr6 (75-147)||(18367895-18367966)
chr6 (75-119)||(28715370-28715414)
chr6 (75-115)||(32839571-32839611)
chr6 (151-199)||(33001324-33001372)
chr6 (151-195)||(34447393-34447437)
[»] scaffold0652 (1 HSPs)
scaffold0652 (76-147)||(403-473)
[»] chr5 (46 HSPs)
chr5 (75-120)||(19820328-19820373)
chr5 (74-147)||(39698600-39698672)
chr5 (75-117)||(14873599-14873641)
chr5 (77-147)||(21190998-21191067)
chr5 (74-113)||(17123128-17123167)
chr5 (75-118)||(21576685-21576728)
chr5 (74-113)||(35017124-35017163)
chr5 (78-120)||(39268541-39268583)
chr5 (75-120)||(7677790-7677835)
chr5 (83-120)||(17088365-17088402)
chr5 (75-120)||(32766872-32766917)
chr5 (75-120)||(38464313-38464358)
chr5 (75-120)||(42893434-42893479)
chr5 (75-120)||(43564955-43565000)
chr5 (75-111)||(10298633-10298669)
chr5 (87-147)||(15382533-15382592)
chr5 (75-111)||(22423764-22423800)
chr5 (75-147)||(28588614-28588685)
chr5 (77-117)||(43001882-43001922)
chr5 (148-199)||(15410480-15410531)
chr5 (75-118)||(21194063-21194106)
chr5 (151-194)||(27144444-27144487)
chr5 (75-118)||(40000493-40000536)
chr5 (84-147)||(43554574-43554636)
chr5 (74-120)||(16304365-16304411)
chr5 (75-117)||(17593663-17593705)
chr5 (75-141)||(41558588-41558654)
chr5 (75-120)||(2419941-2419986)
chr5 (75-120)||(2436985-2437030)
chr5 (79-112)||(4105341-4105374)
chr5 (153-190)||(6035468-6035505)
chr5 (81-114)||(6035559-6035592)
chr5 (74-111)||(24906251-24906288)
chr5 (77-150)||(30502330-30502402)
chr5 (77-150)||(30542673-30542745)
chr5 (75-120)||(31084402-31084447)
chr5 (75-120)||(37328775-37328820)
chr5 (151-184)||(38816730-38816763)
chr5 (76-112)||(3966596-3966632)
chr5 (77-117)||(19579789-19579829)
chr5 (151-199)||(19820429-19820477)
chr5 (75-147)||(21522809-21522880)
chr5 (75-147)||(21533375-21533446)
chr5 (149-181)||(27932229-27932261)
chr5 (74-118)||(30098413-30098457)
chr5 (151-183)||(34879342-34879374)
[»] scaffold0053 (1 HSPs)
scaffold0053 (75-147)||(8846-8917)
[»] scaffold0793 (1 HSPs)
scaffold0793 (75-120)||(4821-4866)
[»] scaffold0003 (2 HSPs)
scaffold0003 (75-120)||(241679-241724)
scaffold0003 (75-118)||(236914-236957)
[»] scaffold0019 (1 HSPs)
scaffold0019 (75-147)||(71784-71855)
[»] scaffold0475 (1 HSPs)
scaffold0475 (75-118)||(3384-3427)
[»] scaffold0020 (1 HSPs)
scaffold0020 (74-120)||(135262-135308)
[»] scaffold0004 (2 HSPs)
scaffold0004 (76-118)||(92898-92940)
scaffold0004 (149-189)||(92793-92833)
[»] scaffold0136 (1 HSPs)
scaffold0136 (75-147)||(3778-3849)
[»] scaffold0086 (1 HSPs)
scaffold0086 (75-119)||(3014-3058)
[»] scaffold0027 (1 HSPs)
scaffold0027 (74-110)||(46741-46777)
[»] scaffold0007 (1 HSPs)
scaffold0007 (77-141)||(225199-225263)
[»] scaffold0009 (1 HSPs)
scaffold0009 (82-120)||(188474-188512)
[»] scaffold0450 (1 HSPs)
scaffold0450 (75-120)||(8564-8609)
[»] scaffold0380 (1 HSPs)
scaffold0380 (75-120)||(8675-8720)
[»] scaffold0361 (1 HSPs)
scaffold0361 (75-120)||(14601-14646)
[»] scaffold0103 (1 HSPs)
scaffold0103 (76-117)||(51900-51941)
[»] scaffold0011 (1 HSPs)
scaffold0011 (75-120)||(17542-17587)
[»] scaffold0223 (1 HSPs)
scaffold0223 (151-199)||(20148-20196)
[»] scaffold0154 (1 HSPs)
scaffold0154 (75-147)||(13472-13543)
[»] scaffold0128 (1 HSPs)
scaffold0128 (76-120)||(32778-32822)
[»] scaffold0057 (1 HSPs)
scaffold0057 (75-111)||(24119-24155)
[»] scaffold0018 (1 HSPs)
scaffold0018 (149-189)||(192282-192322)


Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 20 - 313
Target Start/End: Complemental strand, 17751830 - 17751540
Alignment:
Q  20 actacttcaaagtttaatgaaacaatagatgaaataaatattgtattgacacacactatgaagcacggacactcctcagattaggcgtgtcccggtgtcg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  17751830 actacttcaaagtttaatgaaacaatagatgaaataaatattgtattgacacacactatgaagcgcggacactcctcggattaggcgtgtcccggtgtcg 17751731  T
Q  120 gctatgcgtctgtgtccgacaccgacacataattttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgtatgtatccatgcttcataca 219  Q
    |||||||||||||||||||||||||||||||||||||| |||||| || ||||| |||||||||| |||| |||||||||||||||||||||||||||||    
T  17751730 gctatgcgtctgtgtccgacaccgacacataattttctgaaattactaccggtgtcggcgtgtcagtgtccgtgttgtgtatgtatccatgcttcataca 17751631  T
Q  220 cacatggttaactcaaaaatagaagaatacacaaaatcagcttacttctccccacaaaaatttaccagactgctctatttggcagaacacgaaa 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||    
T  17751630 cacatggttaactcaaaaatagaagaatacacaaaatcagcttactt---cacacaaaaatttaccagactgctctatttggcagaacacgaaa 17751540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 20 - 313
Target Start/End: Complemental strand, 17760817 - 17760527
Alignment:
Q  20 actacttcaaagtttaatgaaacaatagatgaaataaatattgtattgacacacactatgaagcacggacactcctcagattaggcgtgtcccggtgtcg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  17760817 actacttcaaagtttaatgaaacaatagatgaaataaatattgtattgacacacactatgaagcgcggacactcctcggattaggcgtgtcccggtgtcg 17760718  T
Q  120 gctatgcgtctgtgtccgacaccgacacataattttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgtatgtatccatgcttcataca 219  Q
    |||||||||||||||||||||||||||||||||||||| |||||| || ||||| |||||||||| |||| |||||||||||||||||||||||||||||    
T  17760717 gctatgcgtctgtgtccgacaccgacacataattttctgaaattactaccggtgtcggcgtgtcagtgtccgtgttgtgtatgtatccatgcttcataca 17760618  T
Q  220 cacatggttaactcaaaaatagaagaatacacaaaatcagcttacttctccccacaaaaatttaccagactgctctatttggcagaacacgaaa 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||    
T  17760617 cacatggttaactcaaaaatagaagaatacacaaaatcagcttactt---cacacaaaaatttaccagactgctctatttggcagaacacgaaa 17760527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 29510233 - 29510304
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||  | ||||| |||||||||||||||||    
T  29510233 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 29510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 17737696 - 17737641
Alignment:
Q  20 actacttcaaagtttaatgaaacaatagatgaaataaatattgtattgacacacac 75  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||| || |||||    
T  17737696 actacttcaaagtttaatgaaacaattgatgaaattaatattgtattaacgcacac 17737641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 17737268 - 17737218
Alignment:
Q  250 acaaaatcagcttacttctccccacaaaaatttaccagactgctctatttg 300  Q
    ||||||||||||||||||||| || ||||||||||||| ||||||||||||    
T  17737268 acaaaatcagcttacttctccacataaaaatttaccaggctgctctatttg 17737218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 4673354 - 4673418
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgaca 140  Q
    ||||||||||| |||||||||  |||||||||||| |||||||||| |||||||| ||||||||||    
T  4673354 ctatgaagcacagacactccttggattaggcgtgttccggtgtcggatatgcgtc-gtgtccgaca 4673418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 15816058 - 15816103
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcgg 15816103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 22652106 - 22652061
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcgg 22652061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 5813707 - 5813640
Alignment:
Q  79 gaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||||||||  ||||||||||||||||||||||  | | ||| |||||||||||||||||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtc-gtgtccgacaccgacac 5813640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 24205749 - 24205820
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacaca 148  Q
    |||||| |||||||||||||| |||||||||||| |||||||| |  |||||| ||||| |||||||||||||    
T  24205749 tatgaaacacggacactcctcggattaggcgtgttccggtgtcagacatgcgt-tgtgttcgacaccgacaca 24205820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 36450694 - 36450765
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||| |||||||||| |||||||||||||| ||||||||  | ||||| |||||||||||| ||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtc-gtgtccgacacctacac 36450765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 949205 - 949278
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacacat 149  Q
    |||||||||||| ||| ||||||||||||| ||||| ||||||||| |||| ||| || |||| |||||||||||    
T  949205 ctatgaagcacgaacattcctcagattaggagtgtctcggtgtcggatatgtgtc-gtatccggcaccgacacat 949278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 39820547 - 39820482
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacac 141  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||||  | ||||| |||||||||||    
T  39820547 ctatgaagcacggacacttctcggattaggcgtgtccc-gtgtcggacacgcgtcggtgtccgacac 39820482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 8343086 - 8343041
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||    
T  8343086 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcgg 8343041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 8343446 - 8343401
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||    
T  8343446 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcgg 8343401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 22197671 - 22197716
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||    
T  22197671 ctataaagcacggacactcctcagattaggcgtgatccggtgtcgg 22197716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 26902104 - 26902141
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtccc 112  Q
    |||||||||||||||||||||||||| |||||||||||    
T  26902104 ctatgaagcacggacactcctcagataaggcgtgtccc 26902141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 29447574 - 29447529
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||    
T  29447574 ctatgaagcacggacactcctccgattagacctgtcccggtgtcgg 29447529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 13436910 - 13436954
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcg 119  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||    
T  13436910 ctatgaagcacagacactccttggattaggcgtgtcccggtgtcg 13436954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 15734230 - 15734182
Alignment:
Q  23 acttcaaagtttaatgaaacaatagatgaaataaatattgtattgacac 71  Q
    |||||||||||||||||||||||| |||||||  |||||||||| ||||    
T  15734230 acttcaaagtttaatgaaacaatacatgaaatttatattgtattaacac 15734182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 16988030 - 16987990
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgt 117  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  16988030 atgaagcacggacactcctcggattaggggtgtcccggtgt 16987990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 44067644 - 44067580
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacac 141  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||  | || || |||||||||||    
T  44067644 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcatcagtgtccgacac 44067580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 16641908 - 16641951
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgt 117  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||    
T  16641908 actatgaagcacagacactcctcggattaggtgtgtcccggtgt 16641951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 114
Target Start/End: Complemental strand, 25566949 - 25566910
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccgg 114  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  25566949 ctatgaagcacagacactcctcggattaggcgtgtcccgg 25566910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 27213644 - 27213601
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    |||||||||||||||||| ||| |||||| ||||||||||||||    
T  27213644 ctatgaagcacggacacttctcggattagccgtgtcccggtgtc 27213601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 110
Target Start/End: Complemental strand, 31514973 - 31514938
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||| |||||||||||||    
T  31514973 ctatgaagcacggacactcctcggattaggcgtgtc 31514938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 147
Target Start/End: Original strand, 34450958 - 34451032
Alignment:
Q  72 acactatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||||||||||||||  ||| ||||||||||| ||||| |  | | ||| |||||||||||||||||    
T  34450958 acactatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 113
Target Start/End: Original strand, 4298830 - 4298867
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccg 113  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  4298830 ctatgaagcacg-acactcctcagattaggcgtgtcccg 4298867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 11803390 - 11803344
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||||||| |||||| ||||| || |||||||    
T  11803390 actatgaagcacggacactcctcggattagacgtgtacctgtgtcgg 11803344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 21465542 - 21465500
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgt 117  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||    
T  21465542 ctatgaagcacggacactcctcaaattaggcgtatccctgtgt 21465500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 118
Target Start/End: Original strand, 29447040 - 29447082
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||||||||||||||||||  |||||||||||||| ||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtc 29447082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 31109463 - 31109501
Alignment:
Q  80 aagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  31109463 aagcacggacactcctcggattaggcgtgtcccagtgtc 31109501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 115
Target Start/End: Original strand, 37283749 - 37283795
Alignment:
Q  69 cacacactatgaagcacggacactcctcagattaggcgtgtcccggt 115  Q
    |||| |||||||||||||| |||||||| |||||| |||||||||||    
T  37283749 cacaaactatgaagcacgggcactcctcggattagacgtgtcccggt 37283795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 11944795 - 11944750
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||| |||||| || ||||||||||||| |||||||||    
T  11944795 ctatgaagcacgaacactcatcggattaggcgtgtctcggtgtcgg 11944750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 12570438 - 12570483
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||| ||||||||||| || ||||||||||||||||| ||||||||    
T  12570438 ctataaagcacggacaatcttcagattaggcgtgtcctggtgtcgg 12570483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 12570664 - 12570709
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||| ||||||||||| || ||||||||||||||||| ||||||||    
T  12570664 ctataaagcacggacaatcttcagattaggcgtgtcctggtgtcgg 12570709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 13397670 - 13397625
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||   |||||||||||| |||||||||    
T  13397670 ctatgaagcacggacactccttgaattaggcgtgtctcggtgtcgg 13397625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 18407838 - 18407793
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||||||  |||||||||||||  |||||||    
T  18407838 ctatgaagcacggacactcctccaattaggcgtgtcctagtgtcgg 18407793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 120
Target Start/End: Original strand, 22943301 - 22943334
Alignment:
Q  87 gacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||| |||||||||||||||||||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcgg 22943334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 30067968 - 30068013
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||| || ||||||| ||||||| |||||||    
T  30067968 ctatgaagcacggacactcatcggattaggtgtgtcccagtgtcgg 30068013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 38487157 - 38487230
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacaca 148  Q
    ||||||||||| |||||||||| ||||| | |||||| ||||||||  | ||||| |||||||| ||| |||||    
T  38487157 ctatgaagcacagacactcctcggattatgtgtgtccgggtgtcggacacgcgtcggtgtccgaaaccaacaca 38487230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 40064081 - 40064036
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||| |||||||||||||||| ||||||  |||||||||||||||    
T  40064081 ctatgtagcacggacactcctcggattagatgtgtcccggtgtcgg 40064036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 7658489 - 7658441
Alignment:
Q  149 taattttctcaaattattagcggtgccggcgtgtcattgtctgtgttgt 197  Q
    |||||||||||||||||||| |||| |||||| ||  ||||||||||||    
T  7658489 taattttctcaaattattagtggtgtcggcgtatcgatgtctgtgttgt 7658441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 39954314 - 39954346
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtc 183  Q
    ||||||||||||||||||||||| |||||||||    
T  39954314 attttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 53381530 - 53381602
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||| || ||||| |||||||||||||||||    
T  53381530 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacac 53381602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 24343632 - 24343560
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||  | ||||| ||||| |||||||||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacac 24343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 23292924 - 23292997
Alignment:
Q  73 cactatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||  | | ||| |||||||||||||||||    
T  23292924 cactatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtc-gtgtccgacaccgacac 23292997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 18513175 - 18513241
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacac 141  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  |  |||| |||||||||||    
T  18513175 ctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacacacgtcggtgtccgacac 18513241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 7012197 - 7012124
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacaca 148  Q
    ||||||||||||||||||||||  |||||| ||  ||||||||||| || ||||| ||||||||||||||||||    
T  7012197 ctatgaagcacggacactcctcgcattaggtgttccccggtgtcggatacgcgtcggtgtccgacaccgacaca 7012124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 11596297 - 11596342
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  11596297 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcgg 11596342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 28964187 - 28964259
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||||| |||| ||| ||||||||||| |||||    
T  28964187 actatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtc-gtgtccgacacagacac 28964259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 715545 - 715590
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcgg 715590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 752871 - 752916
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcgg 752916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 944602 - 944674
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||| | || ||||||||||||||| |||||||||||||||  | |||||||||| |||||| |||||    
T  944602 ctatgaagctcagagactcctcagattaggtgtgtcccggtgtcggacacgcgtctgtgttcgacactgacac 944674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 3712458 - 3712498
Alignment:
Q  80 aagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  3712458 aagcacggacactcctcagattagccgtgtcccggtgtcgg 3712498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 12895214 - 12895285
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||| ||||||||| |||||||||||||||| |||||| ||   ||| |||||||||||||||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtc-gtgtccgacaccgacac 12895285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 34306744 - 34306815
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||| ||| ||||||||||||||||||| |||||||||  | | ||| |||||||||||||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtc-gtgtccgacaccgacac 34306815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 114
Target Start/End: Original strand, 5775304 - 5775343
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccgg 114  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  5775304 ctatgaagcacggacactcctcggattaggcgtgtcccgg 5775343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 8423656 - 8423703
Alignment:
Q  73 cactatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||    
T  8423656 cactatgacgcacggacacttctccgattaggcgtgtcccggtgtcgg 8423703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 119
Target Start/End: Original strand, 14465006 - 14465049
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcg 119  Q
    |||||||||||||||||||||||||||| |||||||| ||||||    
T  14465006 tatgaagcacggacactcctcagattagacgtgtcccagtgtcg 14465049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 36635449 - 36635406
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||||||||||||||||| || |||||||||||||||||||||    
T  36635449 ctatgaagcacggacactcttcggattaggcgtgtcccggtgtc 36635406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 40784072 - 40784029
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    |||||||||||||||||||||| ||||||| |||||||||||||    
T  40784072 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtc 40784029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 28084640 - 28084598
Alignment:
Q  78 tgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||| ||||||||||||||| |||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcgg 28084598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 18966628 - 18966583
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  18966628 ctatgaagcacggacactccttagattaggcgtatcccgttgtcgg 18966583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 29205587 - 29205542
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  29205587 ctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcgg 29205542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 37203371 - 37203326
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||| ||| |||||| ||||||||||||||||    
T  37203371 ctatgaagcacggacacttctcggattagacgtgtcccggtgtcgg 37203326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 114
Target Start/End: Complemental strand, 2054163 - 2054123
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccgg 114  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  2054163 actatgaaacacggacactcttcagattaggcgtgtcccgg 2054123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 2361915 - 2361986
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||| |  | | ||| |||||||||||||||||    
T  2361915 ctatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtc-gtgtccgacaccgacac 2361986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 3947702 - 3947746
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcgg 3947746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 5922532 - 5922576
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||  |||||||||||||||||||||||||| |||||||    
T  5922532 tatgaagcagagacactcctcagattaggcgtgtcccagtgtcgg 5922576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 30982808 - 30982852
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||| |  |||||||||||||||||||||||    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcgg 30982852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 40965389 - 40965345
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||| ||||||||||||||||||||||||  ||||||||    
T  40965389 tatgaagcaccgacactcctcagattaggcgtgtcttggtgtcgg 40965345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 3064868 - 3064903
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||| |||||||||||||    
T  3064868 ctatgaagcacggacactcctcggattaggcgtgtc 3064903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 111
Target Start/End: Complemental strand, 4383484 - 4383449
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    ||||||||||||||||||||| ||||||||||||||    
T  4383484 tatgaagcacggacactcctcggattaggcgtgtcc 4383449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 22440559 - 22440602
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcgg 22440602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 30094132 - 30094089
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||| ||||||||||||| || |||||||||||||||||||||    
T  30094132 ctatgtagcacggacactcttcggattaggcgtgtcccggtgtc 30094089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 114
Target Start/End: Complemental strand, 30299048 - 30299009
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccgg 114  Q
    |||||||||||||||||||||| |||||| ||||||||||    
T  30299048 ctatgaagcacggacactcctcggattagacgtgtcccgg 30299009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 114
Target Start/End: Complemental strand, 30327916 - 30327877
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccgg 114  Q
    |||||||||||||||||||||| |||||| ||||||||||    
T  30327916 ctatgaagcacggacactcctcggattagacgtgtcccgg 30327877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 847977 - 847927
Alignment:
Q  149 taattttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    |||||||||||||||||||||||   |||||||||| ||||||||| ||||    
T  847977 taattttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgt 847927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 112
Target Start/End: Complemental strand, 23386278 - 23386240
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtccc 112  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  23386278 actatgaagcacggacactcctctgattaggcatgtccc 23386240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 113
Target Start/End: Complemental strand, 28470484 - 28470446
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccg 113  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  28470484 ctatgaagcacggacactcctcggattaggcatgtcccg 28470446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 35723420 - 35723458
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtc 189  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  35723420 attttctcaaattattagcggtgtcggcgtgtcagtgtc 35723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 12884346 - 12884391
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcg 119  Q
    ||||||||||||||||||||||| |||||| |||| |||| |||||    
T  12884346 actatgaagcacggacactcctcggattagacgtgccccgatgtcg 12884391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 12895055 - 12895100
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||| ||  ||||||||| ||||||||||||    
T  12895055 ctatgaagcacggacactcttcgaattaggcgtatcccggtgtcgg 12895100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 16184950 - 16184905
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||  ||||||||| ||||||||||||||| |||||||    
T  16184950 ctatgaagcacaaacactcctcggattaggcgtgtcccagtgtcgg 16184905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 17345451 - 17345488
Alignment:
Q  152 ttttctcaaattattagcggtgccggcgtgtcattgtc 189  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  17345451 ttttctcaaattattagcggtgtcggcgtgtcagtgtc 17345488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 19482798 - 19482753
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||| ||||||||| ||||||| ||||||| |||||||    
T  19482798 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcgg 19482753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 27706110 - 27706151
Alignment:
Q  79 gaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||| ||| |||||||||||||||||||||||| ||||    
T  27706110 gaagcacgtacattcctcagattaggcgtgtcccggtatcgg 27706151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 28000672 - 28000713
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||||||||||||||| |||||||||| ||||| |||||||    
T  28000672 atgaagcacggacactcatcagattaggtgtgtctcggtgtc 28000713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 35157924 - 35157996
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||||||||| ||| ||||| |||||| ||||||| ||  ||| ||| ||||| |||||||||||    
T  35157924 actatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtc-gtgtcagacaccgacac 35157996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 42640643 - 42640602
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtg 116  Q
    |||||||||||||| ||||||| |||||||||||||| ||||    
T  42640643 ctatgaagcacggaaactcctcggattaggcgtgtcctggtg 42640602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 10133828 - 10133756
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||| | ||  ||||||||||||| |||||| ||||||||  | ||||| ||||| |||||||||||    
T  10133828 ctatgaagcatgaacgttcctcagattaggtgtgtcctggtgtcggacacgcgtcagtgtctgacaccgacac 10133756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 11931410 - 11931350
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtc 135  Q
    ||||||||||||||||||||   ||||||| |||||| ||||||||  ||||||| |||||    
T  11931410 ctatgaagcacggacactccatggattaggtgtgtcctggtgtcggacatgcgtcggtgtc 11931350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 18844423 - 18844459
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  18844423 ctatgaagcacggacacttctcggattaggcgtgtcc 18844459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 20521785 - 20521857
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||| ||||  |||||  |||||||||||||  ||| ||||  ||||||| |||||||||||||||||    
T  20521785 ctatgaagctcggattctccttggattaggcgtgtcatggtttcggacatgcgtcggtgtccgacaccgacac 20521857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 23293021 - 23293069
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||| ||||||||||||| ||| ||||||||||||||| |||| ||||    
T  23293021 attttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgt 23293069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 25950471 - 25950515
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||||||||| ||||||||||| ||||||| ||||| |||||||    
T  25950471 actatgaagcatggacactcctcggattaggtgtgtctcggtgtc 25950515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 42015079 - 42015047
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgt 107  Q
    ||||||||||||| |||||||||||||||||||    
T  42015079 ctatgaagcacggtcactcctcagattaggcgt 42015047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 49431145 - 49431074
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||| ||||| ||||||||||| ||| |||||||||||||||| ||  | | ||| |||||||||||||||||    
T  49431145 ctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtc-gtgtccgacaccgacac 49431074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 22515826 - 22515898
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||| |||| ||| |||||||||||||||||    
T  22515826 actatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtc-gtgtccgacaccgacac 22515898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 31694639 - 31694710
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  |||| || ||||||||||||||||||    
T  31694639 ctatgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgt-tgtgtccgacaccgacac 31694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 16812676 - 16812616
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgt 134  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| || ||||| ||||    
T  16812676 actatgaagcacggacactcctcagattaggcgtgtcccggtttcggataagcgtcggtgt 16812616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 42359391 - 42359460
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||||| |||||||||||||||||||||||  |  ||||| ||||||||||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtct-tgtccgacaccgacac 42359460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 6427594 - 6427549
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  6427594 ctatgaagcacggacactcatcagattaggcgtgtcccggtgtcgg 6427549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 32900010 - 32899937
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacaca 148  Q
    |||||||||| ||||| ||||| ||||||| ||||||||||||| |  ||||||| ||||||||||||||||||    
T  32900010 ctatgaagcaaggacaatcctcggattaggggtgtcccggtgtccgacatgcgtcggtgtccgacaccgacaca 32899937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 47989628 - 47989556
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||||||||||||| |||||||||||||||| |||| |  ||| ||| |||||||||||||||||    
T  47989628 actatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtc-gtgtccgacaccgacac 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 1815376 - 1815305
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||  ||| ||| ||||| |||||||||||    
T  1815376 ctatgaatcacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtc-gtgtcggacaccgacac 1815305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 2218350 - 2218302
Alignment:
Q  72 acactatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  2218350 acactatgaagcacggacactcctcagattaggcgtgtcctagtgtcgg 2218302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 9828174 - 9828129
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||    
T  9828174 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcgg 9828129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 21365992 - 21366037
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||    
T  21365992 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcgg 21366037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 40917879 - 40917834
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||    
T  40917879 ctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcgg 40917834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 2896156 - 2896204
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||||||||||||||||||||| |||||||||| |||| |||||||||    
T  2896156 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgt 2896204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 22881567 - 22881611
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcg 119  Q
    |||||||||||||||||||||| |||||| |||||||||||||||    
T  22881567 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcg 22881611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 30359484 - 30359440
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcg 119  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||    
T  30359484 ctatgaagcacggacactcctcagatttggcgtgtcccgttgtcg 30359440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 37598950 - 37598879
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||  | | ||| |||||||||||||||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtc-gtgtccgacaccgacac 37598879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 38075908 - 38075984
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacacata 150  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||||  |  | ||  |||||||||||||||||||    
T  38075908 actatgaagcatgtacactcctcaaattaggcgtgtcccggtgtcggtcacacatcgatgtccgacaccgacacata 38075984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 1486646 - 1486689
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||| |||||||||| |||||||||||||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcgg 1486689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 16297223 - 16297266
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||| |||||||||||||| ||||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcgg 16297266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 22947849 - 22947806
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    |||||||||||||||||||||| |||||||||||||| ||||||    
T  22947849 ctatgaagcacggacactcctcggattaggcgtgtccaggtgtc 22947806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 27965940 - 27965983
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    |||||||||| ||||||||||| |||||||||||||||||||||    
T  27965940 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtc 27965983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 18556384 - 18556430
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  18556384 actatgaagcacggacacttctcggattaggcgtgtcccagtgtcgg 18556430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 112
Target Start/End: Original strand, 35702541 - 35702579
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtccc 112  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  35702541 actatgaagcacggacactcctcggattaggcgtgtccc 35702579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 5944413 - 5944368
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||| ||||||||| |||||||||| ||||||||||||    
T  5944413 ctatgaagcacgaacactcctcggattaggcgtatcccggtgtcgg 5944368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 17831462 - 17831507
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||    
T  17831462 ctatgaaacatggacactcctaagattaggcgtgtcccggtgtcgg 17831507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 29144320 - 29144365
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||| || |||||||||||| ||||||||||    
T  29144320 ctatgaagcacggacactcttcggattaggcgtgttccggtgtcgg 29144365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 46348322 - 46348394
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||| |||| ||| ||||||||| |||||||||  | | ||| |||||||||||||||||    
T  46348322 actatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtc-gtgtccgacaccgacac 46348394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 46940748 - 46940793
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||| ||||||||| |||||||||||| ||||||||||    
T  46940748 ctatgaagcacgaacactcctcggattaggcgtgttccggtgtcgg 46940793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 6936334 - 6936406
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||| ||||||||||| ||||| | || | | |||||||| |||||||| ||||||||||| |||||    
T  6936334 ctatgaagcatggacactcctcggattaagggtattctggtgtcggatatgcgtcggtgtccgacacagacac 6936406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 10233374 - 10233330
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||    
T  10233374 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcgg 10233330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 18337448 - 18337377
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||||||| ||| |||| |||||| |||||||  | | || ||||||||||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgt-tgtgtccgacaccgacac 18337377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 36878585 - 36878541
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcg 119  Q
    |||||||||||||||||||||  ||||||||||||||| ||||||    
T  36878585 ctatgaagcacggacactcctgggattaggcgtgtccccgtgtcg 36878541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 40258874 - 40258918
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||| ||||||||||| |||||||||||||| ||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcgg 40258918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 51410144 - 51410073
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||| | ||||||  ||||||||||||| ||||||||| || | ||| |||||||||||||||||    
T  51410144 ctatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtc-gtgtccgacaccgacac 51410073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 113413 - 113370
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgt 117  Q
    ||||||||||| || |||||||| ||||||||||||||||||||    
T  113413 actatgaagcatgggcactcctcggattaggcgtgtcccggtgt 113370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 2445991 - 2445932
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtc 135  Q
    |||||| || |||||||||||| ||||||||||||||||| | ||  |||||||||||||    
T  2445991 tatgaatcaaggacactcctcaaattaggcgtgtcccggtattggacatgcgtctgtgtc 2445932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 7918154 - 7918197
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    |||||||||||||||||||||| ||||||| |||||| ||||||    
T  7918154 ctatgaagcacggacactcctcggattaggtgtgtcctggtgtc 7918197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 15765877 - 15765834
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||||||||||||||||| || ||||||||||||||| |||||    
T  15765877 ctatgaagcacggacactcttcggattaggcgtgtcccagtgtc 15765834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 17705546 - 17705581
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||||||||| |||||||    
T  17705546 ctatgaagcacggacactcctcagattaagcgtgtc 17705581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 115
Target Start/End: Complemental strand, 26830701 - 26830666
Alignment:
Q  80 aagcacggacactcctcagattaggcgtgtcccggt 115  Q
    ||||||||||||||||| ||||||||||||||||||    
T  26830701 aagcacggacactcctctgattaggcgtgtcccggt 26830666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 36878485 - 36878446
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtct 190  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  36878485 attttctcaaattattagcggtgtcggcgtgtcagtgtct 36878446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 114
Target Start/End: Original strand, 398730 - 398772
Alignment:
Q  72 acactatgaagcacggacactcctcagattaggcgtgtcccgg 114  Q
    |||| |||||||||||||||| || ||||||||||||||||||    
T  398730 acacgatgaagcacggacacttcttagattaggcgtgtcccgg 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 5898206 - 5898248
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgt 117  Q
    |||| ||||||||||||||||| |||||| |||||||||||||    
T  5898206 ctataaagcacggacactcctcggattagacgtgtcccggtgt 5898248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 6574097 - 6574051
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||| |||||||  ||||||||||||||| |||||||    
T  6574097 actatgaagcacggtcactccttggattaggcgtgtcccagtgtcgg 6574051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 8842750 - 8842792
Alignment:
Q  152 ttttctcaaattattagcggtgccggcgtgtcattgtctgtgt 194  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||    
T  8842750 ttttctcaaattactagtggtgccggcgtgtcagtgtctgtgt 8842792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 17831566 - 17831604
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtc 189  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  17831566 attttctcaaattattagcggtgtcggcgtgtcagtgtc 17831604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 20157284 - 20157350
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacac 141  Q
    |||||||||||||| |||||||| |||||| ||||| |||||||||  | ||||| ||||| |||||    
T  20157284 ctatgaagcacggatactcctcaaattaggtgtgtctcggtgtcggacacgcgtcggtgtcggacac 20157350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 22794018 - 22794084
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacac 141  Q
    |||||||||||| |||||||||  |||||| ||||||||| |||||  ||||||| ||||| |||||    
T  22794018 ctatgaagcacgtacactcctcgaattaggtgtgtcccggagtcggacatgcgtcagtgtcggacac 22794084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 113
Target Start/End: Complemental strand, 34741965 - 34741927
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccg 113  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  34741965 ctatgaagcacggacactcttcggattaggcgtgtcccg 34741927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 113
Target Start/End: Original strand, 35919226 - 35919264
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccg 113  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  35919226 ctatgaagcacggacagtcctccgattaggcgtgtcccg 35919264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 41877503 - 41877553
Alignment:
Q  149 taattttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||||||||||||||||||||||| ||||||  || ||||||||| ||||    
T  41877503 taattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgt 41877553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 42004881 - 42004954
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacaca 148  Q
    |||||||||||||||||||| ||  |||||||||||    |||||||  ||||||| ||||||||||||||||||    
T  42004881 actatgaagcacggacactcttcgaattaggcgtgt-ttagtgtcggacatgcgtcggtgtccgacaccgacaca 42004954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 43113056 - 43113010
Alignment:
Q  72 acactatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    |||||||||||||| ||| ||| |||||||||| |||||||||||||    
T  43113056 acactatgaagcacagactctcttcagattaggtgtgtcccggtgtc 43113010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 48450622 - 48450688
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgtatgtatccatgcttcata 217  Q
    ||||| ||||||||||||| |||  ||||||||| |||| |||| ||||  ||||||||||||||||    
T  48450622 attttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccgtatccatgcttcata 48450688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 1704935 - 1704980
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||| ||||||||||  ||||||||||||| |||||||||    
T  1704935 ctatgaagcatggacactccttggattaggcgtgtctcggtgtcgg 1704980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Original strand, 5927281 - 5927310
Alignment:
Q  76 tatgaagcacggacactcctcagattaggc 105  Q
    ||||||||||||||||||||||||||||||    
T  5927281 tatgaagcacggacactcctcagattaggc 5927310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 111
Target Start/End: Original strand, 9630560 - 9630597
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  9630560 actatgaagcacgaacactcctcggattaggcgtgtcc 9630597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 48040418 - 48040459
Alignment:
Q  79 gaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||  |||||||||||||| |||||||    
T  48040418 gaagcacggacactcctccaattaggcgtgtcccagtgtcgg 48040459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 398800 - 398848
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||| ||||||||||||||||| |||||||||| |||| |||| ||||    
T  398800 attttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgt 398848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 7918246 - 7918294
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    |||||||||||||||||| | || | |||||||||||||||||| ||||    
T  7918246 attttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgt 7918294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 14359562 - 14359622
Alignment:
Q  157 tcaaattattagcggtgccggcgtgtcattgtctgtgttgtgtatgtatccatgcttcata 217  Q
    ||||||||||||| ||| |||||||||  ||||||||| ||||  |||||| |||||||||    
T  14359562 tcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtccgtatccgtgcttcata 14359622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 19637872 - 19637813
Alignment:
Q  90 actcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacacata 150  Q
    ||||||| ||||||| | ||||||||||||| ||||  || ||||||||||||||||||||    
T  19637872 actcctcggattaggggcgtcccggtgtcggatatgtatc-gtgtccgacaccgacacata 19637813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 38078601 - 38078672
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||| | ||||||| |||||||||||||| ||||| |   ||| ||| |||||||||||||||||    
T  38078601 ctatgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtc-gtgtccgacaccgacac 38078672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 48450550 - 48450586
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    |||||||||||||||||||||| |||||| |||||||    
T  48450550 ctatgaagcacggacactcctcggattagacgtgtcc 48450586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 150
Target Start/End: Original strand, 40993275 - 40993349
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacacata 150  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||  ||| ||| ||||||||||||||||||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtc-gtgtccgacaccgacacata 40993349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 34185051 - 34185097
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  34185051 actatgaagcacggacactcctcggattaggcgtgtcccggtgtcgg 34185097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 11610628 - 11610583
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  11610628 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcgg 11610583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 20503584 - 20503513
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |  ||| ||| |||||| ||||||||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtc-gtgtccaacaccgacac 20503513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 55401194 - 55401123
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||  | | ||| |||||||||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtc-gtgtccgacaccgacac 55401123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 8789489 - 8789564
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtct-gtgtccgacaccgacacata 150  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| |  ||| || | ||||||||||||||||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacata 8789564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 27505370 - 27505325
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcgg 27505325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 40052431 - 40052386
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||    
T  40052431 ctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcgg 40052386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 2408590 - 2408634
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcg 119  Q
    |||||||||||||| |||||| |||||||||||||||||||||||    
T  2408590 ctatgaagcacggagactccttagattaggcgtgtcccggtgtcg 2408634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 14829816 - 14829776
Alignment:
Q  79 gaagcacggacactcctcagattaggcgtgtcccggtgtcg 119  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  14829816 gaagcacggacattcctcagattaggcgtgtcccggtgtcg 14829776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 24204983 - 24205047
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacac 141  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||  | ||||| |||||||||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacac 24205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 52369906 - 52369834
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||||||| || |||| |||||||||||| ||  | ||||| |||||||| ||||||||    
T  52369906 ctatgaagcacggacactcctcggaataggtgtgtcccggtgttggacacgcgtcggtgtccgataccgacac 52369834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 4987222 - 4987265
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcgg 4987265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 14979268 - 14979225
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    |||||||||||||||||||||| | |||||||||||||||||||    
T  14979268 ctatgaagcacggacactcctcgggttaggcgtgtcccggtgtc 14979225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 34910435 - 34910393
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  34910435 tatgaagcacggacactcctcggattagacgtgtcccggtgtc 34910393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 37077488 - 37077418
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgaca 146  Q
    ||||||||||||||| ||||  ||||||| ||||||| |||||||  ||||||| |||| |||||||||||    
T  37077488 tatgaagcacggacattccttggattaggtgtgtccccgtgtcggacatgcgtccgtgtacgacaccgaca 37077418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 49651716 - 49651766
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatg 125  Q
    |||||||||||||||||| ||| ||||||| ||||||||||||||| ||||    
T  49651716 ctatgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatg 49651766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 18427068 - 18427027
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtg 116  Q
    ||||||| |||||||||||||||||||||| |||||||||||    
T  18427068 ctatgaaacacggacactcctcagattaggtgtgtcccggtg 18427027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 25074914 - 25074841
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacaca 148  Q
    |||||||||||| ||||||||| ||||||| ||||||| |||||||  | ||||  ||||| ||||||||||||    
T  25074914 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgcgttggtgtcagacaccgacaca 25074841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 41961579 - 41961624
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcgg 41961624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 120
Target Start/End: Complemental strand, 1509681 - 1509641
Alignment:
Q  80 aagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||| |||||||||||| ||||||||||    
T  1509681 aagcacggacactcctccgattaggcgtgtaccggtgtcgg 1509641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 4990912 - 4990948
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    |||||||||||||||||||||| ||||||||||||||    
T  4990912 ctatgaagcacggacactcctcggattaggcgtgtcc 4990948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 5441066 - 5441114
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||| ||||    
T  5441066 attttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgt 5441114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 8383281 - 8383233
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||||||||||||||||||||| |||||||||| |||| |||| ||||    
T  8383281 attttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgt 8383233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 15999951 - 15999995
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||| ||||||||||||||  |||||||||||||||||||||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcgg 15999995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 110
Target Start/End: Complemental strand, 8842448 - 8842413
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||| |||||||||||||    
T  8842448 ctatgaagcacggacactcctcggattaggcgtgtc 8842413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 25775624 - 25775581
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcgg 25775581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 107
Target Start/End: Original strand, 32804485 - 32804516
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgt 107  Q
    ||||||||||||||||||||||||||||||||    
T  32804485 tatgaagcacggacactcctcagattaggcgt 32804516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 3163970 - 3164016
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||| |||||||||||  |||||||||||| |||||||||    
T  3163970 actatgaagcatggacactcctcgaattaggcgtgtctcggtgtcgg 3164016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 12704597 - 12704663
Alignment:
Q  81 agcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||  |||||| ||||| | ||||||||  ||||||  |||||||||||||||||    
T  12704597 agcacggacactcctaggattagacgtgttctggtgtcggacatgcgttggtgtccgacaccgacac 12704663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 113
Target Start/End: Complemental strand, 16789141 - 16789103
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccg 113  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  16789141 ctatgaagcacggacactcctcaaattaggtgtgtcccg 16789103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 3730108 - 3730149
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtg 116  Q
    |||||||||| ||||||||||| ||||||| |||||||||||    
T  3730108 ctatgaagcatggacactcctcggattaggtgtgtcccggtg 3730149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 8039760 - 8039809
Alignment:
Q  71 cacactatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||| || |||| || ||||| |||||||||||||||||    
T  8039760 cacactatgaagcacagatactcttcggattaagcgtgtcccggtgtcgg 8039809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 10955074 - 10955000
Alignment:
Q  75 ctatgaagcacggacact---cctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||||||||   |||| ||||||||||||||| |||||||  | | ||| |||||||||||||||||    
T  10955074 ctatgaagcacggacactactcctcggattaggcgtgtcccagtgtcggacacgtgtc-gtgtccgacaccgacac 10955000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 21211414 - 21211341
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||  ||||||||| ||||||| ||||||| |||||||  | ||||| |||||  ||||||||||    
T  21211414 actatgaagcacaaacactcctcggattaggagtgtcccagtgtcggacacgcgtcggtgtcgaacaccgacac 21211341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 1389956 - 1389912
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||||  |||||||| ||||| ||||||||    
T  1389956 tatgaagcacggacactccttggattaggcatgtcctggtgtcgg 1389912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 3631796 - 3631729
Alignment:
Q  82 gcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacacata 150  Q
    ||||||||||||||| || ||||||||||| ||||||||  ||| ||| ||||||||||| | ||||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtc-gtgtccgacactggcacata 3631729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 8039867 - 8039903
Alignment:
Q  148 ataattttctcaaattattagcggtgccggcgtgtca 184  Q
    ||||||||||||||||||||||||||  |||||||||    
T  8039867 ataattttctcaaattattagcggtgttggcgtgtca 8039903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 8101891 - 8101935
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||||||||||| |||||||||||||||| ||||| || |||||    
T  8101891 actatgaagcacgaacactcctcagattagacgtgtaccagtgtc 8101935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 8903554 - 8903514
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggt 115  Q
    |||||||||||| ||||||||| ||||||| ||||||||||    
T  8903554 ctatgaagcacgaacactcctcggattaggtgtgtcccggt 8903514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 11493336 - 11493372
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    |||||||||||||||| |||||| |||||||||||||    
T  11493336 ctatgaagcacggacattcctcatattaggcgtgtcc 11493372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 12084003 - 12083959
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    |||||||||||| |||||||||||||||||||  |||| ||||||    
T  12084003 actatgaagcacagacactcctcagattaggcacgtccaggtgtc 12083959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 110
Target Start/End: Complemental strand, 15544800 - 15544768
Alignment:
Q  78 tgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||||||||||||| |||||||||    
T  15544800 tgaagcacggacactcctcagataaggcgtgtc 15544768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 21861694 - 21861658
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  21861694 ctatgaagcacggacactcctcggattaggtgtgtcc 21861658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 25211648 - 25211604
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||  ||||| |||||||||||||||||| ||||||||    
T  25211648 tatgaagcacaaacacttctcagattaggcgtgtcctggtgtcgg 25211604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 35223058 - 35223014
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||||||||||||||||||||| ||| | ||||||||| |||||    
T  35223058 actatgaagcacggacactcctcggataaagcgtgtccccgtgtc 35223014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 8e-18; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 7133211 - 7133285
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacaca 148  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||||  | ||||| ||||||||||||||||||    
T  7133211 actatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacacgcgtcggtgtccgacaccgacaca 7133285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 24339772 - 24339701
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||| || | ||| |||||||||||||||||    
T  24339772 ctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtc-gtgtccgacaccgacac 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 5409771 - 5409816
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcgg 5409816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 21880271 - 21880200
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||||  ||| ||| |||||||||||||||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtc-gtgtccgacaccgacac 21880200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 6490841 - 6490790
Alignment:
Q  69 cacacactatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||| ||||||||||||||||||||||| ||||| |||||||||||||||||    
T  6490841 cacaaactatgaagcacggacactcctcggattaagcgtgtcccggtgtcgg 6490790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 82 - 120
Target Start/End: Original strand, 18215144 - 18215182
Alignment:
Q  82 gcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18215144 gcacggacactcctcagattaggcgtgtcccggtgtcgg 18215182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 598327 - 598282
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcgg 598282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 9778624 - 9778579
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||  |||||||||||||||||||||||    
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcgg 9778579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 43027404 - 43027449
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||| || |||||||||||||||||||||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcgg 43027449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 32287404 - 32287448
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcgg 32287448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 12289138 - 12289071
Alignment:
Q  151 attttctcaaattattagcggtg-ccggcgtgtcattgtctgtgttgtgtatgtatccatgcttcata 217  Q
    ||||||||||||||||||| ||| ||||||||||  |||| ||||||||| ||||||| |||||||||    
T  12289138 attttctcaaattattagcagtggccggcgtgtcggtgtccgtgttgtgtctgtatccgtgcttcata 12289071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 20549909 - 20549836
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacacata 150  Q
    |||||||||||| |||||||| ||||||||||||| |  ||||||  ||| || |||||||||||||||||||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgt-tgtgtccgacaccgacacata 20549836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 40287301 - 40287347
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||| |||||||||||||||||| |||||||| ||||||||||||||    
T  40287301 actacgaagcacggacactcctcggattaggcatgtcccggtgtcgg 40287347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 1401142 - 1401097
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||||    
T  1401142 ctatgaagcatggacactcctcagattaggtgtgtcccgatgtcgg 1401097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 1433578 - 1433533
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||| |||||| ||||||| ||||||||    
T  1433578 ctatgaagcacggacactcctcggattagacgtgtcctggtgtcgg 1433533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 8842282 - 8842323
Alignment:
Q  78 tgaagcacggacactcctcagattaggcgtgtcccggtgtcg 119  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  8842282 tgaagcacggacactccttggattaggcgtgtcccggtgtcg 8842323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 14729822 - 14729777
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||||    
T  14729822 ctatgaagtacggacactcctcggattaagcgtgtcccggtgtcgg 14729777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 29763129 - 29763174
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||| |||||||||||||| | ||||||    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtcctgatgtcgg 29763174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 2425768 - 2425816
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||||||||||||||| |||||||||||||||| | ||||||| ||||    
T  2425768 attttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgt 2425816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 15680928 - 15680857
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||||||||||||  ||||| |||||| |||||||||  | | ||| |||||||||||||||||    
T  15680928 ctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtc-gtgtccgacaccgacac 15680857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 22484050 - 22484006
Alignment:
Q  150 aattttctcaaattattagcggtgccggcgtgtcattgtctgtgt 194  Q
    |||||||| ||||||||||||||| |||||||||| |||||||||    
T  22484050 aattttctaaaattattagcggtgtcggcgtgtcagtgtctgtgt 22484006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 35862070 - 35862034
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    |||||||||||||||||||||| ||||||||||||||    
T  35862070 ctatgaagcacggacactcctcggattaggcgtgtcc 35862034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 5236013 - 5235962
Alignment:
Q  148 ataattttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    |||||||||| ||||||||||||||| || ||||||| ||||||||| ||||    
T  5236013 ataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 5235962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 21568561 - 21568604
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||||||||| |||||||||||||||| || ||||||||||||    
T  21568561 ctatgaagcacagacactcctcagattaagcatgtcccggtgtc 21568604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 32093953 - 32094000
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgt-cccggtgtcgg 120  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||||||    
T  32093953 actatgaagcacgaacactcctcggattaggcgtgtccccggtgtcgg 32094000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 43250118 - 43250059
Alignment:
Q  80 aagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgac 139  Q
    |||||||||||||||||  ||||||||||||| ||||||||  | ||||| |||||||||    
T  43250118 aagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgac 43250059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 17852120 - 17852074
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||||  |||||| ||||| |||||||||    
T  17852120 actatgaagcacggacactcctcgaattaggtgtgtctcggtgtcgg 17852074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 27945067 - 27945017
Alignment:
Q  149 taattttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    |||||||||||||||||||| |||| |||||||||| |||| |||| ||||    
T  27945067 taattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgt 27945017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 113
Target Start/End: Original strand, 28973881 - 28973919
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccg 113  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  28973881 ctatgaagcacggacacacctcggattaggcgtgtcccg 28973919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 29787404 - 29787450
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgt 197  Q
    ||||||||||||||||||||||| |||||||| | |||| |||||||    
T  29787404 attttctcaaattattagcggtgtcggcgtgttaatgtccgtgttgt 29787450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 113
Target Start/End: Original strand, 29812598 - 29812636
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccg 113  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  29812598 ctatgaagcacggacacttctcggattaggcgtgtcccg 29812636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 30813916 - 30813882
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgt 109  Q
    |||||||||||||||||||||| ||||||||||||    
T  30813916 ctatgaagcacggacactcctcggattaggcgtgt 30813882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 32308144 - 32308106
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtc 189  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  32308144 attttctcaaattattagcggtgtcggcgtgtcagtgtc 32308106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 145
Target Start/End: Original strand, 41229237 - 41229307
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgac 145  Q
    |||||||||||||||||| |||| |||||||||||| | ||| |||  | ||||  |||||||||||||||    
T  41229237 ctatgaagcacggacacttctcatattaggcgtgtcgcagtgacggacacgcgttggtgtccgacaccgac 41229307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 112
Target Start/End: Complemental strand, 3991432 - 3991395
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtccc 112  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  3991432 ctatgaagcccggacactcctcggattaggcgtgtccc 3991395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 21864927 - 21864882
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||| ||||||||||  ||||| ||||||||||||||||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcgg 21864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 24105797 - 24105752
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||  ||||||||| | |||||||||||||||||||||    
T  24105797 ctatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcgg 24105752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 28155596 - 28155563
Alignment:
Q  149 taattttctcaaattattagcggtgccggcgtgt 182  Q
    ||||||||||||||||||||||||| ||||||||    
T  28155596 taattttctcaaattattagcggtgtcggcgtgt 28155563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 40131939 - 40131984
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||| |||||||||| |||||| |||||||| |||||||    
T  40131939 ctatgaagcacagacactcctcggattagacgtgtccctgtgtcgg 40131984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 1433478 - 1433430
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||||||||||||||| ||||| |||||||||| |||| |||| ||||    
T  1433478 attttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgt 1433430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 11722133 - 11722181
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||||||||||| ||||||||| |||||||||| |||| |||| ||||    
T  11722133 attttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgt 11722181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 120
Target Start/End: Complemental strand, 13770810 - 13770770
Alignment:
Q  80 aagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||| || |||||||||||| ||||||||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcgg 13770770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 106
Target Start/End: Complemental strand, 19213913 - 19213881
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcg 106  Q
    ||||||||||||||||||||||| |||||||||    
T  19213913 actatgaagcacggacactcctcggattaggcg 19213881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 25481926 - 25481878
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||| ||||||||||||| ||| |||||||||||||||  ||||||||    
T  25481926 attttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgt 25481878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 25822786 - 25822742
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    |||||||| ||||||||||||| ||||||||| ||||||| ||||    
T  25822786 actatgaaacacggacactccttagattaggcatgtcccgatgtc 25822742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 28943351 - 28943383
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgt 109  Q
    |||||||||||||||||||||||||||| ||||    
T  28943351 atgaagcacggacactcctcagattaggtgtgt 28943383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 38134335 - 38134379
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcg 119  Q
    |||||||||||  ||||||||| |||||||||||||||| |||||    
T  38134335 ctatgaagcacatacactcctcggattaggcgtgtcccgatgtcg 38134379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 38804489 - 38804561
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||  ||||||||| |||||||| |||||||| |||||  |  |||| |||||||||||| ||||    
T  38804489 ctatgaagcacatacactcctcggattaggcatgtcccggcgtcggacacacgtcggtgtccgacaccaacac 38804561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 8e-18; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 2438661 - 2438730
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||||| |||||||||||||||||||||||  ||| ||| |||||||||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtc-gtgtccgacaccgacac 2438730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 37419873 - 37419802
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||||||| |||||||||||||||||||||||  | || || |||||||||||||||||    
T  37419873 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatc-gtgtccgacaccgacac 37419802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 11223793 - 11223836
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  11223793 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 11223836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 44635618 - 44635568
Alignment:
Q  69 cacacactatgaagcacggacactcctcagattaggcgtgtcccggtgtcg 119  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  44635618 cacacgctatgaagcacggacactcctcagattaggcgtgtctcggtgtcg 44635568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 18840952 - 18841024
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||  ||| ||| ||||| |||||||||||    
T  18840952 actatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgacac 18841024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 15907850 - 15907901
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatg 125  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||| ||||    
T  15907850 actatgaagcacggacactcatcagattgggcgtgtcccggtgtcggatatg 15907901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 38117098 - 38117144
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||    
T  38117098 actatgaagcacggacacccctcggattaggcgtgtcccggtgtcgg 38117144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 26769641 - 26769596
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcgg 26769596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 35056998 - 35056927
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||||||||||||||||||||  | |||||||  | | ||| |||||||||||||||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtc-gtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 21782743 - 21782786
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgt 117  Q
    ||||||||||||||||||||| |||||||| |||||||||||||    
T  21782743 actatgaagcacggacactccacagattagacgtgtcccggtgt 21782786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 19942382 - 19942341
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtc 19942341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 37559096 - 37559051
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcgg 37559051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 39323357 - 39323316
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtg 116  Q
    ||||||||||||||||||||||||||||||| ||||| ||||    
T  39323357 ctatgaagcacggacactcctcagattaggcctgtccaggtg 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 42511322 - 42511367
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcgg 42511367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 5367288 - 5367237
Alignment:
Q  98 gattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacacata 150  Q
    ||||||||||||||||| ||||| |||| ||| ||||||||||||||||||||    
T  5367288 gattaggcgtgtcccggagtcggatatgtgtc-gtgtccgacaccgacacata 5367237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 23058389 - 23058429
Alignment:
Q  80 aagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  23058389 aagcacggacacttctcggattaggcgtgtcccggtgtcgg 23058429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 6180790 - 6180857
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacacc 142  Q
    |||||||||||||| ||||||||||||||| ||||| | || ||||  ||| ||| ||||||||||||    
T  6180790 ctatgaagcacggaaactcctcagattaggtgtgtctcagtatcggacatgagtcggtgtccgacacc 6180857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 10535685 - 10535728
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||    
T  10535685 ctatgaagcacgaacactcctcggattaggcgtgtcctggtgtc 10535728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 12748786 - 12748743
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||    
T  12748786 ctatgaagcacagacactcctcaaattaggcatgtcccggtgtc 12748743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 28596587 - 28596517
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||||||||||| ||||||| ||||||  |||||||  | | ||| |||||||||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtc-gtgtccgacaccgacac 28596517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 118
Target Start/End: Original strand, 3444827 - 3444869
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||||||||||||||||||| |||||||| |||||| |||||    
T  3444827 tatgaagcacggacactcctcggattaggcatgtcccagtgtc 3444869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 18622721 - 18622679
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgt 117  Q
    |||||||||||||||||||||| ||||| | ||||||||||||    
T  18622721 ctatgaagcacggacactcctcggattaagtgtgtcccggtgt 18622679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 25080918 - 25080876
Alignment:
Q  157 tcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    |||||||||||||||||||||||||| | ||||||| ||||||    
T  25080918 tcaaattattagcggtgccggcgtgttagtgtctgtattgtgt 25080876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 113
Target Start/End: Original strand, 34221463 - 34221501
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccg 113  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  34221463 ctatgaagcacggaaactcctcggattaggcgtgtcccg 34221501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 34691763 - 34691805
Alignment:
Q  69 cacacactatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    |||||| |||||| |||||||||||||| ||||||||||||||    
T  34691763 cacacattatgaaacacggacactcctcggattaggcgtgtcc 34691805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 34714175 - 34714217
Alignment:
Q  69 cacacactatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    |||||| |||||| |||||||||||||| ||||||||||||||    
T  34714175 cacacattatgaaacacggacactcctcggattaggcgtgtcc 34714217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 22084756 - 22084797
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtg 116  Q
    ||||||||||| ||||||| || |||||||||||||||||||    
T  22084756 ctatgaagcacagacactcatcggattaggcgtgtcccggtg 22084797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 23354582 - 23354619
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccg 113  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  23354582 tatgaaccacggacactcctcggattaggcgtgtcccg 23354619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 24975255 - 24975300
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||||||||||   |||||| |||||||    
T  24975255 ctatgaagcacggacactcctcagattagatttgtcccagtgtcgg 24975300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 32749754 - 32749799
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||| ||||||||||| |||| ||||||||||| |||||||    
T  32749754 ctatgaagcgcggacactccttagataaggcgtgtcccagtgtcgg 32749799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 15972992 - 15972921
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||| || || ||||||| ||||||||| |||||  | | ||| |||||||||||||||||    
T  15972992 ctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtc-gtgtccgacaccgacac 15972921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 18631350 - 18631394
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    |||||||||| ||||||||||||  |||||||||||||| |||||    
T  18631350 actatgaagctcggacactcctcgcattaggcgtgtcccagtgtc 18631394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 19536361 - 19536397
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  19536361 ctatgaagcatggacactcctcggattaggcgtgtcc 19536397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 21616786 - 21616754
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtc 183  Q
    ||||||||||||||||||||||| |||||||||    
T  21616786 attttctcaaattattagcggtgtcggcgtgtc 21616754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 21782853 - 21782901
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||||||||||||||||| ||| |||||||||| ||| ||||| ||||    
T  21782853 attttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgt 21782901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 23354926 - 23354962
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccg 113  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  23354926 atgaagcaaggacactcctcggattaggcgtgtcccg 23354962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 30717459 - 30717503
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcg 119  Q
    |||||||||||||||||||||  |||||||||| |||| ||||||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcg 30717503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 44860449 - 44860405
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||  |||||| |||||||| ||||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcgg 44860405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 10339054 - 10339125
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||  ||| ||| |||||||||||||||||    
T  10339054 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtc-gtgtccgacaccgacac 10339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 7378098 - 7378024
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtct-gtgtccgacaccgacacata 150  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||  |||| | | ||||||||||||||||||||    
T  7378098 ctatgaagcacggacacttctcagattagccgtgtcccggtgtcgg--atgcatgtcgtgtccgacaccgacacata 7378024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 28152218 - 28152146
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||||||  | | ||| |||||||||||||||||    
T  28152218 actatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtc-gtgtccgacaccgacac 28152146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 32978842 - 32978910
Alignment:
Q  78 tgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||||||||  |||||| ||||||||||||||||  ||| ||| |||||||||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtc-gtgtccgacaccgacac 32978910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 426478 - 426514
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    |||||||||||||||||||||||||||||||||||||    
T  426478 ctatgaagcacggacactcctcagattaggcgtgtcc 426514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 4878061 - 4877991
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||||||| |||||||||||| || |||||||  ||| ||| |||||||||||||||||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgt-cctgtgtcggacatgtgtc-gtgtccgacaccgacac 4877991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 9107299 - 9107370
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||| |||||||| ||||||| |||||||||||||||  |  ||| ||||||||||||||||||    
T  9107299 ctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgt-tgtgtccgacaccgacac 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 16766827 - 16766756
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||| || || |||||||||||||||||||||||  | | || ||||||||||||||||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgt-tgtgtccgacaccgacac 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 31959268 - 31959224
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcgg 31959224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 34595253 - 34595182
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||||||| ||||||| ||||||||||||| |  | | ||| |||||||||||||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtc-gtgtccgacaccgacac 34595182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 114
Target Start/End: Original strand, 10770607 - 10770646
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccgg 114  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  10770607 ctatgaagcacggacactcctcagattaggcatgtcccgg 10770646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 17327590 - 17327633
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    |||||||||||||||||||||| ||||||||||||||| |||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtc 17327633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 7248489 - 7248443
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||||||| |||| | ||||||||||||||||    
T  7248489 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcgg 7248443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 8389411 - 8389453
Alignment:
Q  78 tgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcgg 8389453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 9025448 - 9025490
Alignment:
Q  78 tgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||| ||| |||||||||||||||||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcgg 9025490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 5569866 - 5569825
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  5569866 atgaagcacggacactcctcagattaggcgtgttcaggtgtc 5569825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 7938219 - 7938174
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||    
T  7938219 ctatgaagcacggacactcctcggatcaggcgtgtctcggtgtcgg 7938174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 8365448 - 8365493
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||    
T  8365448 ctatgaagcacggagactcctcggattaggcgtgtcccagtgtcgg 8365493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 8776908 - 8776953
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||| ||||||| ||||| |||||||||    
T  8776908 ctatgaagcacggacactcctcggattaggtgtgtctcggtgtcgg 8776953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 12236778 - 12236737
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtg 116  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  12236778 ctatgaagcacgaacactcctcaggttaggcgtgtcccggtg 12236737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 26178620 - 26178661
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||||||| |||||||||| |||||||||||||||||||||    
T  26178620 atgaagcacagacactcctccgattaggcgtgtcccggtgtc 26178661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 31385048 - 31385007
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgt 117  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgt 31385007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 34446691 - 34446618
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||||||||||||  ||||||| ||||||| ||||| | || ||||| ||||  |||||||||||    
T  34446691 actatgaagcacggacactccttggattaggtgtgtcccagtgtcagatacgcgtcggtgttggacaccgacac 34446618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 34894968 - 34895013
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||    
T  34894968 ctatgaagcacggacactcctcatattaggtgtgtccctgtgtcgg 34895013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 8714110 - 8714039
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||  |||||||||| |||| ||||||||||| ||||||  ||| ||| |||||||||||||||||    
T  8714110 ctatgaagcaaagacactcctcggattgggcgtgtcccgatgtcggaaatgtgtc-gtgtccgacaccgacac 8714039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 17841530 - 17841574
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||||| ||||||||||||| | |||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcgg 17841574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 194
Target Start/End: Original strand, 20371145 - 20371188
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgt 194  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||    
T  20371145 attttctcaaattattagcggtgtcggcgtgtcaatgtccgtgt 20371188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 121
Target Start/End: Original strand, 34073277 - 34073324
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcggc 121  Q
    |||||||||||||||||||||||  |||||  ||||||||||||||||    
T  34073277 actatgaagcacggacactcctcgaattagaggtgtcccggtgtcggc 34073324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 7723199 - 7723233
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgt 109  Q
    |||||||||||||||||||||| ||||||||||||    
T  7723199 ctatgaagcacggacactcctcggattaggcgtgt 7723233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 13360312 - 13360358
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||| || ||||||||||||| | |||||||    
T  13360312 actatgaagcacggacactcttcggattaggcgtgtctcagtgtcgg 13360358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 108
Target Start/End: Original strand, 32511605 - 32511639
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtg 108  Q
    ||||||||||||||||||||||| |||||||||||    
T  32511605 actatgaagcacggacactcctccgattaggcgtg 32511639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 3209518 - 3209473
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||  ||||||||| |||||||||||||| ||||||||    
T  3209518 ctatgaagcacaaacactcctcggattaggcgtgtccgggtgtcgg 3209473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 7265535 - 7265607
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacacata 150  Q
    ||||||||||||| |||||| |||||||| | | ||||||||||  |||  | |||||||||||||||||||||    
T  7265535 atgaagcacggacgctcctcggattaggcatattccggtgtcggacatgtat-tgtgtccgacaccgacacata 7265607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 8805524 - 8805561
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtccc 112  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  8805524 ctatgaagcacggacactcctcggattaggcatgtccc 8805561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 111
Target Start/End: Complemental strand, 9997829 - 9997792
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  9997829 actacgaagcacggacactcctcagattaggggtgtcc 9997792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 19040376 - 19040343
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtca 184  Q
    ||||||||||||||||||||||| ||||||||||    
T  19040376 attttctcaaattattagcggtgtcggcgtgtca 19040343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 25207859 - 25207814
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||| ||||| | |||||||||| ||||||||||||||||||||||    
T  25207859 ctataaagcatgaacactcctcatattaggcgtgtcccggtgtcgg 25207814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 28919488 - 28919517
Alignment:
Q  75 ctatgaagcacggacactcctcagattagg 104  Q
    ||||||||||||||||||||||||||||||    
T  28919488 ctatgaagcacggacactcctcagattagg 28919517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 677861 - 677798
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgtatgtatccatgcttcata 217  Q
    ||||||||||||||||| | ||| |||||||||| ||||||   ||||| |||||| ||||||||||    
T  677861 attttctcaaattattaacagtgtcggcgtgtcagtgtctg---tgtgtctgtatcaatgcttcata 677798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 2117175 - 2117139
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    |||||||||||||||||||||| |||||||| |||||    
T  2117175 ctatgaagcacggacactcctccgattaggcatgtcc 2117139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 5732474 - 5732510
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgtcc 5732510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 5970037 - 5970108
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||  | |||||||| |||| ||||||||||| ||||||  ||| ||| |||||||||||||||||    
T  5970037 ctatgaagcatagtcactcctcggattgggcgtgtcccgatgtcggaaatgtgtc-gtgtccgacaccgacac 5970108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 7086819 - 7086771
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||||||||||||||||| |||||| ||||||  ||||||||| ||||    
T  7086819 attttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgt 7086771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 8805607 - 8805655
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||||||||||||||||| |||||| ||||||  ||||||||| ||||    
T  8805607 attttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgt 8805655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 9027198 - 9027154
Alignment:
Q  155 tctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||||||||||||||||| |||||||||| |||| |||| ||||    
T  9027198 tctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgt 9027154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 9658903 - 9658855
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||||| ||||||||||||||| |||||||||| |||| |||| ||||    
T  9658903 attttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgt 9658855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 10649407 - 10649371
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    |||||||||||||||||||||  ||||||||||||||    
T  10649407 ctatgaagcacggacactccttggattaggcgtgtcc 10649371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 10842652 - 10842612
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggt 115  Q
    |||||||||||||||||||||| |||||| |||||| ||||    
T  10842652 ctatgaagcacggacactcctcggattagccgtgtctcggt 10842612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 13851760 - 13851712
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||||||||||||||||||||| || ||||||| |||| |||| ||||    
T  13851760 attttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 18367966 - 18367895
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||||||  ||| ||||||||||| ||||| |  ||| ||| ||||| |||||||||||    
T  18367966 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtc-gtgtctgacaccgacac 18367895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 28715414 - 28715370
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcg 119  Q
    |||||||||||| ||||| |||  |||||||||||||||||||||    
T  28715414 ctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcg 28715370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 115
Target Start/End: Original strand, 32839571 - 32839611
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggt 115  Q
    ||||||||||| |||||| ||| ||||||||||||||||||    
T  32839571 ctatgaagcacagacacttctcggattaggcgtgtcccggt 32839611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 33001324 - 33001372
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||| ||||||||||||| ||| ||||||||||||| | |||||||||    
T  33001324 attttttcaaattattagcagtgtcggcgtgtcattgaccgtgttgtgt 33001372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 34447393 - 34447437
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgtt 195  Q
    ||||| ||||||||||| |||||  ||||||||||||||||||||    
T  34447393 attttatcaaattattaacggtgttggcgtgtcattgtctgtgtt 34447437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 403 - 473
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||  | ||||| |||||||||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 19820328 - 19820373
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  19820328 ctatgaagcacggacactcctctgattaggcgtgtcccggtgtcgg 19820373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 39698672 - 39698600
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||| ||   ||| |||||||||||||||||    
T  39698672 actatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtc-gtgtccgacaccgacac 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 14873641 - 14873599
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgt 117  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  14873641 ctatgaagcacggacactcctcggattaggcgtgtcccggtgt 14873599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 21190998 - 21191067
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||||||||| ||||||||||||||||| |||||  | | || ||||||||||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgt-tgtgtccgacaccgacac 21191067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 17123167 - 17123128
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccg 113  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  17123167 actatgaagcacggacactcctcggattaggcgtgtcccg 17123128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 21576685 - 21576728
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    |||||||||||||||||||||| ||||||||||||||| |||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtc 21576728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 35017163 - 35017124
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccg 113  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  35017163 actatgaagcacggacactcctcggattaggcgtgtcccg 35017124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 39268541 - 39268583
Alignment:
Q  78 tgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||| ||||||||||||||| |||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcgg 39268583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 7677835 - 7677790
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||| ||| |||||| |||||||||||||||||||||||    
T  7677835 ctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcgg 7677790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 120
Target Start/End: Complemental strand, 17088402 - 17088365
Alignment:
Q  83 cacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||| |||||||||||||||||||||||    
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcgg 17088365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 32766872 - 32766917
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  32766872 ctatgaagcacggacactcctcagattagacgtatcctggtgtcgg 32766917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 38464313 - 38464358
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||||    
T  38464313 ctatgaagcacagacactcctcggattaggtgtgtcccggtgtcgg 38464358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 42893479 - 42893434
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||| |||||||||||| ||||||||||||| ||||||||    
T  42893479 ctatgaagcatggacactcctcatattaggcgtgtcctggtgtcgg 42893434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 43565000 - 43564955
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||    
T  43565000 ctatgaagcacggacacttctcggattaggcgtgtcccggcgtcgg 43564955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 10298669 - 10298633
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    |||||||||||||||||||||| ||||||||||||||    
T  10298669 ctatgaagcacggacactcctcggattaggcgtgtcc 10298633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 15382592 - 15382533
Alignment:
Q  87 gacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||| |||||||||||||||||||||||  ||| ||| |||||| ||||||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtc-gtgtccaacaccgacac 15382533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 22423764 - 22423800
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    |||||||||||||||||||||| ||||||||||||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgtcc 22423800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 28588614 - 28588685
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||| |||||||| || ||||| |||||||| |||||| | |||| ||| |||||||||||||||||    
T  28588614 ctatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtc-gtgtccgacaccgacac 28588685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 43001922 - 43001882
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgt 117  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgt 43001882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 15410480 - 15410531
Alignment:
Q  148 ataattttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    |||||||||| ||||||||||||||| |||||||||| |||| |||| ||||    
T  15410480 ataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgt 15410531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 21194063 - 21194106
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    |||| ||||||||||||||||| ||||||||||| |||||||||    
T  21194063 ctataaagcacggacactcctcggattaggcgtgccccggtgtc 21194106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 194
Target Start/End: Complemental strand, 27144487 - 27144444
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgt 194  Q
    |||| |||||||||||||||||| |||||||||| |||||||||    
T  27144487 atttcctcaaattattagcggtgtcggcgtgtcagtgtctgtgt 27144444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 40000493 - 40000536
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    |||||||||||||||||||||||||| || |||||| |||||||    
T  40000493 ctatgaagcacggacactcctcagataagacgtgtctcggtgtc 40000536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 43554636 - 43554574
Alignment:
Q  84 acggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||| ||| ||||||||||||||| |||||||  | ||||| |||||||||||||||||    
T  43554636 acggacacttctcggattaggcgtgtccc-gtgtcggacacgcgtcggtgtccgacaccgacac 43554574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 16304365 - 16304411
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||| ||||| |||||| |||||| |||||||||    
T  16304365 actatgaagcacggacattcctcggattagacgtgtctcggtgtcgg 16304411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 17593663 - 17593705
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgt 117  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||    
T  17593663 ctatgaagtacggacactcctcggattaagcgtgtcccggtgt 17593705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 41558588 - 41558654
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacac 141  Q
    ||||||||||| ||||||| ||| ||||||||| ||| ||||||||  | || ||||||||||||||    
T  41558588 ctatgaagcactgacactcttcaaattaggcgtatcctggtgtcggtcacgcatctgtgtccgacac 41558654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 2419986 - 2419941
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||| || ||||||| ||||||||| |||||    
T  2419986 ctatgaagcacggacactcatcggattaggtgtgtcccggggtcgg 2419941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 2437030 - 2436985
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||| ||||||||| |||||||||||||  ||||||||    
T  2437030 ctatgaagcacgaacactcctcggattaggcgtgtcttggtgtcgg 2436985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 112
Target Start/End: Complemental strand, 4105374 - 4105341
Alignment:
Q  79 gaagcacggacactcctcagattaggcgtgtccc 112  Q
    |||||||||||||||||| |||||||||||||||    
T  4105374 gaagcacggacactcctcggattaggcgtgtccc 4105341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 6035505 - 6035468
Alignment:
Q  153 tttctcaaattattagcggtgccggcgtgtcattgtct 190  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  6035505 tttctcaaattattagcggtgtcggcgtgtcagtgtct 6035468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 114
Target Start/End: Complemental strand, 6035592 - 6035559
Alignment:
Q  81 agcacggacactcctcagattaggcgtgtcccgg 114  Q
    ||||| ||||||||||||||||||||||||||||    
T  6035592 agcacagacactcctcagattaggcgtgtcccgg 6035559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 111
Target Start/End: Original strand, 24906251 - 24906288
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    |||||||||||||||||||||||  |||||||||||||    
T  24906251 actatgaagcacggacactcctcgaattaggcgtgtcc 24906288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 30502330 - 30502402
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacacata 150  Q
    |||||||||| ||| ||||  |||||||| |||||| |||||||  ||| ||| ||||||||||||||||||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtc-gtgtccgacaccgacacata 30502402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 30542673 - 30542745
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacacata 150  Q
    |||||||||| ||| ||||  |||||||| |||||| |||||||  ||| ||| ||||||||||||||||||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtc-gtgtccgacaccgacacata 30542745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 31084447 - 31084402
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||| |||||||||||||| |||||||| |||||| |||||||    
T  31084447 ctatgaaccacggacactcctcggattaggcatgtcccagtgtcgg 31084402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 37328775 - 37328820
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||| ||||| |||| ||||||| ||||    
T  37328775 ctatgaagcacggacactcctcggattaagcgtatcccggtatcgg 37328820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 38816730 - 38816763
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtca 184  Q
    ||||||||||||||||||||||| ||||||||||    
T  38816730 attttctcaaattattagcggtgtcggcgtgtca 38816763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 3966632 - 3966596
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtccc 112  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  3966632 tatgaagcacggacactcctcggattagacgtgtccc 3966596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 19579829 - 19579789
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgt 117  Q
    ||||| |||| ||||||||| ||||||||||||||||||||    
T  19579829 atgaaacacgtacactcctcggattaggcgtgtcccggtgt 19579789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 19820429 - 19820477
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||||||||||||||||||||| ||| |||||| |||| |||| ||||    
T  19820429 attttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgt 19820477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 21522880 - 21522809
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||| |||||||||||| |  ||||||||||||||||||| |||  | | ||| |||||||||||||||||    
T  21522880 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtc-gtgtccgacaccgacac 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 21533446 - 21533375
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||| |||||||||||| |  ||||||||||||||||||| |||  | | ||| |||||||||||||||||    
T  21533446 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtc-gtgtccgacaccgacac 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 27932261 - 27932229
Alignment:
Q  149 taattttctcaaattattagcggtgccggcgtg 181  Q
    ||||||||||||||||||||||||| |||||||    
T  27932261 taattttctcaaattattagcggtgtcggcgtg 27932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 30098457 - 30098413
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||||||||||||||| ||||| ||||||| |||||| ||||||    
T  30098457 actatgaagcacggacattcctcggattaggtgtgtcctggtgtc 30098413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 34879374 - 34879342
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtc 183  Q
    ||||||||||||| |||||||||||||||||||    
T  34879374 attttctcaaatttttagcggtgccggcgtgtc 34879342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 8917 - 8846
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||  | | ||| |||||||||||||||||    
T  8917 ctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtc-gtgtccgacaccgacac 8846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 4821 - 4866
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcgg 4866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 241724 - 241679
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcgg 241679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 236914 - 236957
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||||||||| |||||||||||||||||| |||||||||||||    
T  236914 ctatgaagcacagacactcctcagattaggtgtgtcccggtgtc 236957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 71855 - 71784
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||||  | | || ||||||||||||||||||    
T  71855 ctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgt-tgtgtccgacaccgacac 71784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 3427 - 3384
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    |||||||||||||||||||||| ||||||||||||||| |||||    
T  3427 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtc 3384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 135262 - 135308
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||||||    
T  135262 actatgaagcacgaacacgcctcagattaggcgtgtcctggtgtcgg 135308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 92940 - 92898
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtc 118  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtc 92898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 92833 - 92793
Alignment:
Q  149 taattttctcaaattattagcggtgccggcgtgtcattgtc 189  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  92833 taattttctcaaattattagcggtgtcggcgtgtcagtgtc 92793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 3778 - 3849
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||||| ||||||||||| ||||||||||||| || ||||||  ||| ||| |||||||||||| ||||    
T  3778 ctatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtc-gtgtccgacaccaacac 3849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 3058 - 3014
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcg 119  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||    
T  3058 ctatggagcacggacactcctcggattaggcgtgttccggtgtcg 3014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 46777 - 46741
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||||||||||||| |||||||||||||    
T  46777 actatgaagcacggacactcctcggattaggcgtgtc 46741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 225199 - 225263
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacac 141  Q
    ||||||||||||||||||||  ||||||||||||| |||||||   | ||||| |||||||||||    
T  225199 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcgaacacgcgtcagtgtccgacac 225263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 120
Target Start/End: Complemental strand, 188512 - 188474
Alignment:
Q  82 gcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||| |||||||||||||| ||||||||    
T  188512 gcacggacactcctcggattaggcgtgtcctggtgtcgg 188474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 8564 - 8609
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    ||||||||||||||||||||||  ||||||||||| || |||||||    
T  8564 ctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcgg 8609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 8720 - 8675
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||||||||||  |||||||||| |||| |||||||    
T  8720 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgg 8675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 14646 - 14601
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||| ||||||||  ||||||||||||| |||||||||    
T  14646 ctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcgg 14601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 51941 - 51900
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgt 117  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||    
T  51941 tatgaagcatggacattcctcggattaggcgtgtcccggtgt 51900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 17542 - 17587
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||||||| ||||  | |||||||||||||||||||||||    
T  17542 ctatgaagcacggaaactcagctgattaggcgtgtcccggtgtcgg 17587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 20196 - 20148
Alignment:
Q  151 attttctcaaattattagcggtgccggcgtgtcattgtctgtgttgtgt 199  Q
    ||||| ||||||||||||| ||| ||||||||||||||| |||| ||||    
T  20196 attttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgt 20148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 13543 - 13472
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 147  Q
    |||||||| ||||||||||||| ||||||| || ||||| |||||  || | ||| |||||||||||||||||    
T  13543 ctatgaagtacggacactcctcggattaggtgtatcccgatgtcgtatacgtgtc-gtgtccgacaccgacac 13472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 32822 - 32778
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcgg 120  Q
    |||||||||| |||||||||| ||||| | |||||||||||||||    
T  32822 tatgaagcaccgacactcctcggattatgtgtgtcccggtgtcgg 32778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 24155 - 24119
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtcc 111  Q
    ||||||||||||||||||| || ||||||||||||||    
T  24155 ctatgaagcacggacactcatcggattaggcgtgtcc 24119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 192282 - 192322
Alignment:
Q  149 taattttctcaaattattagcggtgccggcgtgtcattgtc 189  Q
    ||||||||||||||||||| ||||| |||||||||| ||||    
T  192282 taattttctcaaattattaacggtgtcggcgtgtcagtgtc 192322  T

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