View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9367_low_4 (Length: 310)
Name: NF9367_low_4
Description: NF9367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9367_low_4 |
 | |
|
| [»] chr7 (6 HSPs) |
| |
|
| [»] chr8 (1 HSPs) |
| |
|
| [»] chr6 (2 HSPs) |
| |
|
| [»] scaffold0003 (1 HSPs) |
| |
|
| [»] scaffold0032 (2 HSPs) |
| | |
|
| [»] chr3 (3 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 250; Significance: 1e-139; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 22863110 - 22862801
Alignment:
| Q |
1 |
tcaataaactgattaaaaggagtgtaatcggcataattaaaattctccacacgacctcttctttcagcactagatcgaacatcattaaaatcaccaagaa |
100 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||| || |||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
22863110 |
tcaataaactgattaaaaggaatgtaattggcataactataattctccacgcgacctcttctttcagcactagaacgaacaccattaaaatcaccaagaa |
22863011 |
T |
|
| Q |
101 |
cacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaa |
200 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22863010 |
cacaccaagccgcttccccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaagaagcataaatattcgccaa |
22862911 |
T |
|
| Q |
201 |
acagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaacagacggatcccacacc |
300 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||| |||||||||||| |
|
|
| T |
22862910 |
acagaacacctcattatttgttacaaaggagcctttaacaatcaaacaattatcaatatttactgacaaccagacatccaacacagaaggatcccacacc |
22862811 |
T |
|
| Q |
301 |
gtaataatac |
310 |
Q |
| |
|
|||||||||| |
|
|
| T |
22862810 |
gtaataatac |
22862801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 47556148 - 47556457
Alignment:
| Q |
1 |
tcaataaactgattaaaaggagtgtaatcggcataattaaaattctccacacgacctcttctttcagcactagatcgaacatcattaaaatcaccaagaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
47556148 |
tcaataaactgattaaaaggagtgtaatcgacgtaattataattctccacacgacctcttctttcagcactagaacgaacatcattaaagtcaccaagaa |
47556247 |
T |
|
| Q |
101 |
cacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaa |
200 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47556248 |
cacaccacaccgcttccccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaa |
47556347 |
T |
|
| Q |
201 |
acagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaacagacggatcccacacc |
300 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||||||||||||| | ||||||||||||||||||| |||||||| ||||| |||||||||| | |
|
|
| T |
47556348 |
acagaacacctcattatttgctacaaaggagcctttaacaatcaaacaattagcaatatttactgacaaccagacatccaacacagaaggatcccacaac |
47556447 |
T |
|
| Q |
301 |
gtaataatac |
310 |
Q |
| |
|
|| ||||||| |
|
|
| T |
47556448 |
gtgataatac |
47556457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 20695379 - 20695070
Alignment:
| Q |
1 |
tcaataaactgattaaaaggagtgtaatcggcataattaaaattctccacacgacctcttctttcagcactagatcgaacatcattaaaatcaccaagaa |
100 |
Q |
| |
|
||||| |||||||||||||||| ||||| ||||| | |||| ||| | || ||||||||||| ||||||| ||||| |||||||||||||||||| |
|
|
| T |
20695379 |
tcaatgaactgattaaaaggagcataatcaccataagaagaattatccgctcgccctcttctttcttcactagaccgaacgacattaaaatcaccaagaa |
20695280 |
T |
|
| Q |
101 |
cacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaa |
200 |
Q |
| |
|
||||||||| ||||| |||||| ||| ||||||||| || ||||||||| | || ||||||||| | |||||||| ||||| |||| ||||| |
|
|
| T |
20695279 |
tacaccaagcagcttcatcatgtacctgaatcaaattagataacacatcccacaaatcttgccgccccctattgtcacaaggggcataggtattagccaa |
20695180 |
T |
|
| Q |
201 |
acagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaacagacggatcccacacc |
300 |
Q |
| |
|
||| |||| ||| ||||| || || ||||||||||||||||||| | ||||||| || | || |||||||||||| ||| | |||||||| |
|
|
| T |
20695179 |
acaaaacaattcactattttttaagaacctccctttaacaatcaaacaattaacaatattcaccgtcacccaaacatccaacacactagagtcccacact |
20695080 |
T |
|
| Q |
301 |
gtaataatac |
310 |
Q |
| |
|
|||||||||| |
|
|
| T |
20695079 |
gtaataatac |
20695070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 20700857 - 20700548
Alignment:
| Q |
1 |
tcaataaactgattaaaaggagtgtaatcggcataattaaaattctccacacgacctcttctttcagcactagatcgaacatcattaaaatcaccaagaa |
100 |
Q |
| |
|
||||| |||||||||||||||| ||||| ||||| | |||| ||| | || ||||||||||| ||||||| ||||| |||||||||||||||||| |
|
|
| T |
20700857 |
tcaatgaactgattaaaaggagcataatcaccataagaagaattatccgctcgccctcttctttcttcactagaccgaacgacattaaaatcaccaagaa |
20700758 |
T |
|
| Q |
101 |
cacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaa |
200 |
Q |
| |
|
||||||||| ||||| |||||| ||| ||||||||| || ||||||||| | || ||||||||| | |||||||| ||||| |||| ||||| |
|
|
| T |
20700757 |
tacaccaagcagcttcatcatgtacctgaatcaaattagataacacatcccacaaatcttgccgccccctattgtcacaaggggcataggtattagccaa |
20700658 |
T |
|
| Q |
201 |
acagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaacagacggatcccacacc |
300 |
Q |
| |
|
||| |||| ||| ||||| || || ||||||||||||||||||| | ||||||| || | || |||||||||||| ||| | |||||||| |
|
|
| T |
20700657 |
acaaaacaattcactattttttaagaacctccctttaacaatcaaacaattaacaatattcaccgtcacccaaacatccaacacactagagtcccacact |
20700558 |
T |
|
| Q |
301 |
gtaataatac |
310 |
Q |
| |
|
|||||||||| |
|
|
| T |
20700557 |
gtaataatac |
20700548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 148 - 310
Target Start/End: Original strand, 591117 - 591279
Alignment:
| Q |
148 |
tcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaac |
247 |
Q |
| |
|
|||||||||| ||||||||||||| ||| | ||||||||||||| || |||||||| |||| ||||| ||| || ||| || || || | ||||| | |
|
|
| T |
591117 |
tcccacaacatctgtcgccccctaatattagaaggagcataaatgtttgccaaacaaaacatgtcattgttttttaaaaacgacccctttatcatcaagc |
591216 |
T |
|
| Q |
248 |
aataatcaatatttactgacaaccaaacatccaaaacagacggatcccacaccgtaataatac |
310 |
Q |
| |
|
||| |||||||||| | || ||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
591217 |
aatttgcaatatttacagtcatccaaacatccagcacactaggatcccacaccgtaataatac |
591279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 308
Target Start/End: Original strand, 12124498 - 12124751
Alignment:
| Q |
55 |
cctcttctttcagcactagatcgaacatcattaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccaca |
154 |
Q |
| |
|
||||| ||||| ||||||| || ||| |||| || |||||||| ||||||||||| | |||||||| | ||||||||||| | || ||||||| |
|
|
| T |
12124498 |
cctctcctttcttcactagaacgcacaacattgaagtcaccaagcacacaccaagctacatctccatgaaccaagaacaaattagagatagcttcccaca |
12124597 |
T |
|
| Q |
155 |
acacctgtcgccccctactatcacaaggagcataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatc |
254 |
Q |
| |
|
| | ||| ||||||||| ||| ||||||||||||||||| ||||||| |||| ||||||||| | ||| || || || | |||||||||| |
|
|
| T |
12124598 |
aaagctggcgccccctattattgcaaggagcataaatatttaccaaacaaaacatttcattatttttaataaacgaccccttgatcatcaaacaatttgt |
12124697 |
T |
|
| Q |
255 |
aatatttactgacaaccaaacatccaaaacagacggatcccacaccgtaataat |
308 |
Q |
| |
|
||| ||||| | || |||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
12124698 |
aatgtttaccgtcatccaaacatccaacacactaggatcccacaccgtaataat |
12124751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 10799044 - 10798735
Alignment:
| Q |
1 |
tcaataaactgattaaaaggagtgtaatcggcataattaaaattctccacacgacctcttctttcagcactagatcgaacatcattaaaatcaccaagaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
10799044 |
tcaataaactgattaaaaggagtgtaattgacataagtataattctccacacgacctcttctttcagcactagaacgaacatcattaaagtcaccaagaa |
10798945 |
T |
|
| Q |
101 |
cacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaa |
200 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10798944 |
cacaccaagccgcttccccatgtaaaggaaacaaattagacaaagaatcccacaacacttgtcgccccctactatcacaaggagcataaatattcgccaa |
10798845 |
T |
|
| Q |
201 |
acagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaacagacggatcccacacc |
300 |
Q |
| |
|
|| ||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||| |||||||||||| |
|
|
| T |
10798844 |
actgaacacctcattatttgctacaaaggagcctttaacaatcaaacaattatcaatatttactgacaaccagacatccaacacagaaggatcccacacc |
10798745 |
T |
|
| Q |
301 |
gtaataatac |
310 |
Q |
| |
|
|| ||||||| |
|
|
| T |
10798744 |
gtgataatac |
10798735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 218; Significance: 1e-120; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 5388888 - 5388579
Alignment:
| Q |
1 |
tcaataaactgattaaaaggagtgtaatcggcataattaaaattctccacacgacctcttctttcagcactagatcgaacatcattaaaatcaccaagaa |
100 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||||| | |||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
5388888 |
tcaataaactgattgaaaggaatgtaatcggcataagcataattctttacacgacctcgtctttcagcactagaacgaacatcattaaaatcaccaagaa |
5388789 |
T |
|
| Q |
101 |
cacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaa |
200 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
5388788 |
cacaccaagccgcttctccatgtaatggaaacaaattagacaaagaatcccacaacacctgatgccccctactgtcacaaggagcataaacattcgccaa |
5388689 |
T |
|
| Q |
201 |
acagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaacagacggatcccacacc |
300 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| ||||||||||| |||||||| ||||| |||||||||| | |
|
|
| T |
5388688 |
acagaacacctcattatttgcaacaaaagaacctttaacaatcaaacaattatcaatattaactgacaaccagacatccaacacagaaggatcccacatc |
5388589 |
T |
|
| Q |
301 |
gtaataatac |
310 |
Q |
| |
|
|||||||||| |
|
|
| T |
5388588 |
gtaataatac |
5388579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 2897316 - 2897372
Alignment:
| Q |
254 |
caatatttactgacaaccaaacatccaaaacagacggatcccacaccgtaataatac |
310 |
Q |
| |
|
|||||||||| | ||||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
2897316 |
caatatttaccgtcaaccaaacatccaaaacactaggatcccacacagtaataatac |
2897372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 52 - 310
Target Start/End: Complemental strand, 222029 - 221771
Alignment:
| Q |
52 |
cgacctcttctttcagcactagatcgaacatcattaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatccc |
151 |
Q |
| |
|
|||||||||| ||| ||||||| ||||| ||||||||||||||||||||||||| | ||||| |||||||| ||| |||||||| ||||| | ||| |
|
|
| T |
222029 |
cgacctcttcgttcttcactagaccgaacgacattaaaatcaccaagaacacaccacacagcttccccatgtaactgaatcaaattagtcaaagcacccc |
221930 |
T |
|
| Q |
152 |
acaacacctgtcgccccctactatcacaaggagcataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaata |
251 |
Q |
| |
|
|||| ||||| || || |||||||| ||||||||||||||||| |||||||| ||||| |||||| || || || ||||| ||||| ||||||| |
|
|
| T |
221929 |
acaaaacctggcgaccactactatcgcaaggagcataaatatttgccaaacaaaacacttcattactttttatgaacttccctttcacaataaaacaatt |
221830 |
T |
|
| Q |
252 |
atcaatatttactgacaaccaaacatccaaaacagacggatcccacaccgtaataatac |
310 |
Q |
| |
|
| ||||||||||||| ||||| ||||||| ||| ||||||||||| || ||||||| |
|
|
| T |
221829 |
agcaatatttactgataaccagacatccaccacactaggatcccacacagtgataatac |
221771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0032 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0032
Description:
Target: scaffold0032; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 55 - 219
Target Start/End: Complemental strand, 50290 - 50126
Alignment:
| Q |
55 |
cctcttctttcagcactagatcgaacatcattaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccaca |
154 |
Q |
| |
|
||||||||||| ||||||| ||||| ||||||| || ||||| ||| |||||||| | || || ||||| | | ||||||||| | || ||||||| |
|
|
| T |
50290 |
cctcttctttcttcactagaacgaacgacattaaagtcgccaagcacaaaccaagccacatcaccgtgtaatagtagcaaattagagacagcgtcccaca |
50191 |
T |
|
| Q |
155 |
acacctgtcgccccctactatcacaaggagcataaatattcgccaaacagaacacctcattattt |
219 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||| |
|
|
| T |
50190 |
gaacctgtcgccccctattatcacaaggagcataaatatttgccaaacaaaacacttcattattt |
50126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0032; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 52988 - 52932
Alignment:
| Q |
55 |
cctcttctttcagcactagatcgaacatcattaaaatcaccaagaacacaccaagcc |
111 |
Q |
| |
|
||||||||||| ||||||| ||||| ||||||| |||||||| |||||||||||| |
|
|
| T |
52988 |
cctcttctttcttcactagaacgaacgacattaaagtcaccaagcacacaccaagcc |
52932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 219
Target Start/End: Complemental strand, 17824097 - 17823927
Alignment:
| Q |
49 |
acacgacctcttctttcagcactagatcgaacatcattaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaat |
148 |
Q |
| |
|
|||| |||||||||||| ||||||| ||||| ||||||| |||||||| ||||||||||| | || || |||| ||||||||||||| | | || |
|
|
| T |
17824097 |
acacaacctcttctttcttcactagaacgaacgacattaaagtcaccaagcacacaccaagctacatcaccgtgtaccagaaacaaattagagaccgcat |
17823998 |
T |
|
| Q |
149 |
cccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaaacagaacacctcattattt |
219 |
Q |
| |
|
||||||| ||||| || |||||| ||| |||||||||||||||||| |||||||| |||| ||||||||| |
|
|
| T |
17823997 |
cccacaaaacctgacgtcccctattattacaaggagcataaatatttgccaaacaaaacatttcattattt |
17823927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 15646353 - 15646312
Alignment:
| Q |
178 |
caaggagcataaatattcgccaaacagaacacctcattattt |
219 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| ||||||||| |
|
|
| T |
15646353 |
caaggagcataaatatttgccaaacaaaacacttcattattt |
15646312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 310
Target Start/End: Complemental strand, 17151107 - 17150865
Alignment:
| Q |
68 |
cactagatcgaacatcattaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccc |
167 |
Q |
| |
|
|||||| ||||||| ||||||| |||||||| ||||||||||| | || ||||| | ||||||||||| | || |||||||| ||| ||||| |
|
|
| T |
17151107 |
cactagttcgaacaacattaaagtcaccaagcacacaccaagctacatcaccatgaaccaagaacaaattagagacagcttcccacaaactctgacgccc |
17151008 |
T |
|
| Q |
168 |
cctactatcacaaggagcataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgac |
267 |
Q |
| |
|
|||| ||| ||||||||||||||||| ||||||| ||||| ||||||||| | ||| | || || | |||||||||| |||| ||||| | | |
|
|
| T |
17151007 |
cctaatattgcaaggagcataaatatttaccaaacaaaacacttcattatttttaataaacaaccccttgatcatcaaacaatttgcaatgtttaccgtc |
17150908 |
T |
|
| Q |
268 |
aaccaaacatccaaaacagacggatcccacaccgtaataatac |
310 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
17150907 |
aaccaaacatccaacacattaggatcccacaccgtaataatac |
17150865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 148 - 308
Target Start/End: Original strand, 3517690 - 3517850
Alignment:
| Q |
148 |
tcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaac |
247 |
Q |
| |
|
|||||||| | ||| ||||||||| ||| ||||||||||||||||| ||||||| |||| |||| |||| | ||| || || || | ||||||| |
|
|
| T |
3517690 |
tcccacaaaatctggcgccccctattattgcaaggagcataaatatttaccaaacaaaacatttcatgatttttaataaacgaccccttgattatcaaac |
3517789 |
T |
|
| Q |
248 |
aataatcaatatttactgacaaccaaacatccaaaacagacggatcccacaccgtaataat |
308 |
Q |
| |
|
||| |||||||||| | ||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
3517790 |
aatttgcaatatttaccgtcaaccaaacatccaacacactaggatcccacaccgtaataat |
3517850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 23824553 - 23824643
Alignment:
| Q |
128 |
gaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaaacagaacacctcattatt |
218 |
Q |
| |
|
||||||||||||| | | ||||||||| ||||| || || ||| ||| |||||||||||| ||||| |||||||| ||||| |||||||| |
|
|
| T |
23824553 |
gaaacaaattagagaccgcatcccacaagacctgacgtcctctattattacaaggagcatatatatttgccaaacaaaacacttcattatt |
23824643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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