View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9369_low_61 (Length: 243)
Name: NF9369_low_61
Description: NF9369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9369_low_61 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 34092827 - 34093069
Alignment:
| Q |
1 |
atgattaggacttttctcaatgagaaactttgccaaagtcagattgatattgaataattggctaaacaaatctcacattatatatacacaaccacttgaa |
100 |
Q |
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| T |
34092827 |
atgattaggacttttctcaataagaaactttgccaaagtcagattgatattgaataattggcaaaacaaatctcacattatatatacacaaccacttgaa |
34092926 |
T |
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| Q |
101 |
ataaaagaaacaattacattgtatgcaaatcattatcgttggctattagagcatatattaattcaaagatgaaaaagacattggtagctagaaaaatgaa |
200 |
Q |
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| T |
34092927 |
ataaaagaaacaattacattgtatgcaaatcattatcgttggctattagagcatatattaattcaaagatgaaaaagacattggtagctagaaaaatgaa |
34093026 |
T |
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| Q |
201 |
gaagaggcattaggttaggtatatgtgatgatgtccatctcat |
243 |
Q |
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||||||||||||||||||||| ||||||||||||||| ||||| |
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| T |
34093027 |
gaagaggcattaggttaggtaaatgtgatgatgtccacctcat |
34093069 |
T |
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