View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9369_low_81 (Length: 215)
Name: NF9369_low_81
Description: NF9369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9369_low_81 |
 | |
|
| [»] scaffold0343 (1 HSPs) |
| | |
|
| [»] scaffold0068 (1 HSPs) |
| | |
|
| [»] scaffold0434 (1 HSPs) |
| | |
|
| [»] scaffold0085 (1 HSPs) |
| | |
|
| [»] scaffold0172 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 169; Significance: 8e-91; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 5389395 - 5389204
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5389395 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
5389296 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5389295 |
ggtgttc-ttgtaagtgagtagtgacgatgggcggtggtggataccgtgtttacggtgcttgttttttgggagtttgttttaggtggtgatgt |
5389204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 46692793 - 46692601
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||||| ||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||| |
|
|
| T |
46692793 |
ggaggtcgcgaggtttgtgatagctgcattatcctccggttaagtgctcttcgaaatgtggctcagcttgggtgttggggtctggaagttttatttggag |
46692694 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
46692693 |
ggtgttctttgtgggtgagtagtgacgatgggcggtggttgatatcgtgtttacagtgcttgtttttttggagtttgttttaggtggtgatgt |
46692601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 5459268 - 5459460
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
|||||| |||||||||||| ||||| |||| |||||| |||| |||||||| || |||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
5459268 |
ggaggttgcgaggtttgtgatagctgcatgatccttcagttaggtgctctttgaaatgtggctcagcttgggtgttggggtctggaagttttattttgat |
5459367 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||||| || ||||||| |
|
|
| T |
5459368 |
ggtgttctttgtgggtgagtagtgacgatgggcggtggtggataccgtgtttacagtgattgtttttttggagtttgttttaagtagtgatgt |
5459460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 24449904 - 24449711
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||| | |||| ||||||||||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
24449904 |
ggaggtcgcgaggtttgtgatagttgcatgatccttcggttaggtgctcttcgaaatgcggctcagcttgggtgttggggtctaggagttttattttgag |
24449805 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtt-ttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||| |||| ||||| | ||||||||||||||| |
|
|
| T |
24449804 |
ggtgttatttgtgggtgagtagtgacgatgggcggtggtggataccgtgtttacagtgcttgttttttttggagtctactttaggtggtgatgt |
24449711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 41920559 - 41920753
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtcct-----tcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttatt |
111 |
Q |
| |
|
||||||||||||||||||| ||||| |||| |||| || |||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
41920559 |
ggaggtcgcgaggtttgtgatagctgcatgatcctaaccttcagttaggtgctcttcatcatgtggctcagcttgggtgttggggtcttggagttttatt |
41920658 |
T |
|
| Q |
112 |
ttgagggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttg-ttttttgggagtttgttttaggtggtg |
205 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||| |||| ||||| || ||||||||||| |||||| |||||| ||||||||||||||||||| |
|
|
| T |
41920659 |
ttgagggtgttttttgtgggtgagtagtgacgataggcggtggtgaataccgtgtttacattgcttgtttttttttgagtttgttttaggtggtg |
41920753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 31585734 - 31585608
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgtt-ggggtctgggagttttattttga |
115 |
Q |
| |
|
||||||||||||||||||| ||||| ||| ||||| ||||| ||||||||||| |||||||| |||||||||||| |||||||| |||||||||||||| |
|
|
| T |
31585734 |
ggaggtcgcgaggtttgtgatagctgtatgatcctttggttaggtgctcttcgaaatgtggctaagcttgggtgttgggggtctgagagttttattttga |
31585635 |
T |
|
| Q |
116 |
gggtgttctttgtaggtgagtagtgac |
142 |
Q |
| |
|
||||||||||||| ||||||||||||| |
|
|
| T |
31585634 |
gggtgttctttgtgggtgagtagtgac |
31585608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 6764346 - 6764225
Alignment:
| Q |
26 |
gaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgagggtgttctt |
125 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||| ||||||||||| |||||||||| ||||| | |||||||||||||||||||||| ||| ||||||| |
|
|
| T |
6764346 |
gaggtttgtgatagctgcatggtccttcggttaggtgctcttcgaaatgtggctcaacttggatactggggtctgggagttttattttcaggatgttctt |
6764247 |
T |
|
| Q |
126 |
tgtaggtgagtagtgacgatgg |
147 |
Q |
| |
|
||| |||||||||||||||||| |
|
|
| T |
6764246 |
tgtgggtgagtagtgacgatgg |
6764225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 30685878 - 30685705
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||||| |||| ||||| ||||| |||||| | ||||||||||||||||||||||||||| | |
|
|
| T |
30685878 |
ggaggtcgcgaggtttgtgatagctgcatgatcctttggttaggtgctccttgatatgtggctcagcttgggtgttgggat------------------- |
30685798 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttt-tgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
||||||||||| |||| ||||||| |||||||| |||||||| ||||||||||| ||||||||||| | ||||| |||||||||||||||||| |
|
|
| T |
30685797 |
-gtgttctttgtgggtgtgtagtgaagatgggcggtggtggataccgtgtttacattgcttgtttttgttggagtctgttttaggtggtgatgt |
30685705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 24684451 - 24684273
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||| ||| || | |||| ||||||||| | ||||||||||| |||||||||| ||||| ||| |||||||| | |||||| |||| | |
|
|
| T |
24684451 |
ggaggtcgcgaggtt-gtggaagatgcatgatccttcggtcaggtgctcttcgaaatgtggctcaacttggatgtcggggtctgcgtgttttagtttg-g |
24684354 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
||| ||||||||||||||||||| |||||||| ||||||||||| | ||||||||| |||||||||||||||||||||||| |
|
|
| T |
24684353 |
ggt------------tgagtagtgacgatgggcggtggtggatatcgtgtttacagagtttgtttttttggagtttgttttaggtggtgatgt |
24684273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 6804739 - 6804814
Alignment:
| Q |
109 |
attttgagggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttttt |
184 |
Q |
| |
|
||||| |||||||||||||| |||||| |||||||||||||| |||||||| | || ||||||||||||||||||| |
|
|
| T |
6804739 |
attttcagggtgttctttgtgggtgaggagtgacgatgggcggtggtggatactgtatttacagtgcttgtttttt |
6804814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 7857814 - 7857915
Alignment:
| Q |
72 |
atgtggctcagcttgggtgttggggtctgggagttttattttga-gggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttac |
170 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||||||||||| ||||||||| || ||||||||||| ||||||| | | ||||| |||||||||| |
|
|
| T |
7857814 |
atgtggctcagtttgggtgttgaagtctgggagttttattttgaggggtgttctatgggggtgagtagtggcgatgggtggttgtgga--ccgtgtttac |
7857911 |
T |
|
| Q |
171 |
agtg |
174 |
Q |
| |
|
|||| |
|
|
| T |
7857912 |
agtg |
7857915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 181
Target Start/End: Complemental strand, 46814387 - 46814277
Alignment:
| Q |
72 |
atgtggctcagcttgggtgttggggtctgggagttttattttgaggg-tgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttac |
170 |
Q |
| |
|
||||||||| || ||||||||| || |||||||||||||| ||||| |||| |||| ||||||||||||||||||| || | |||||| | |||||||| |
|
|
| T |
46814387 |
atgtggctcggcgtgggtgttgaagtatgggagttttatttcgaggggtgttatttggaggtgagtagtgacgatggacggttgtggatactgtgtttac |
46814288 |
T |
|
| Q |
171 |
agtgcttgttt |
181 |
Q |
| |
|
|| | |||||| |
|
|
| T |
46814287 |
agggtttgttt |
46814277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 27031793 - 27031687
Alignment:
| Q |
38 |
agctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttga-gggtgttctttgtaggtgagt |
136 |
Q |
| |
|
|||| |||| || |||||||||| ||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||| ||||||||| || ||||||| |
|
|
| T |
27031793 |
agctgcatgttcattcggttaagagcttttcga-atgtggctcagtttggatgttgaagtctgggagttttattttgaggggtgttctctg-gggtgagt |
27031696 |
T |
|
| Q |
137 |
agtgacgat |
145 |
Q |
| |
|
||||||||| |
|
|
| T |
27031695 |
agtgacgat |
27031687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 31584894 - 31584823
Alignment:
| Q |
134 |
agtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtga |
206 |
Q |
| |
|
||||||||||||| ||| |||||||| |||||||||||||| ||||||||| |||| ||||||||||||||| |
|
|
| T |
31584894 |
agtagtgacgatgagcggtggtggataccgtgtttacagtgattgtttttttggag-gtgttttaggtggtga |
31584823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 24659113 - 24659166
Alignment:
| Q |
96 |
gtctgggagttttattttga-gggtgttctttgtaggtgagtagtgacgatggg |
148 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||| ||||||||||||||||||| |
|
|
| T |
24659113 |
gtctgggagttttattttgaggggtgttatttgggggtgagtagtgacgatggg |
24659166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 32882586 - 32882638
Alignment:
| Q |
130 |
ggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttt |
182 |
Q |
| |
|
||||||||||||||||||| | || ||||| ||||||||||||||| ||||| |
|
|
| T |
32882586 |
ggtgagtagtgacgatgggtggtgttggatatcgtgtttacagtgctcgtttt |
32882638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 149; Significance: 7e-79; HSPs: 17)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 38306368 - 38306560
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
38306368 |
ggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgtgagttttattttgag |
38306467 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | |||||||| ||||| | |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
38306468 |
ggtgttctttgtaggtgagtagtgacgatgggtggtggtggatatcgtgtctgcagttcttgttttttgggagtttgttttaggtggtgatgt |
38306560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 47325859 - 47325665
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||||| ||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47325859 |
ggaggtcgcgaggtttgtgatagctgaatgatccttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggggtctgggagttttattttgag |
47325760 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtt--ttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||||| |||| | |||||||||||||||||||||| |
|
|
| T |
47325759 |
ggtgttctttgtgggtgagtagtgacgatgggcgatgatggatactgtgtttacagtgcttgtttttttttgaagtttgttttaggtggtgatgt |
47325665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 44353538 - 44353345
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttatttt-ga |
115 |
Q |
| |
|
||||||||||||||||||| ||||| |||| ||||||||||| ||||||||||| ||||| | | |||||||||||||||||||||||||||||||| || |
|
|
| T |
44353538 |
ggaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaaatgtgacccggcttgggtgttggggtctgggagttttatttttga |
44353439 |
T |
|
| Q |
116 |
gggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||| |
|
|
| T |
44353438 |
gggtgttctttgtaggtgagtagtgacgatggacggtggtggataccgtgtttacagtgcttgattttttggagtctgttttaggtggtgatgt |
44353345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 43 - 209
Target Start/End: Complemental strand, 31972082 - 31971916
Alignment:
| Q |
43 |
catggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgagggtgttctttgtaggtgagtagtgac |
142 |
Q |
| |
|
|||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
31972082 |
catgatccttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggggtctgggagttttatttggagggtgttctttgtgggtgagtagtgac |
31971983 |
T |
|
| Q |
143 |
gatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||| |||| ||| |||||||||||||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
31971982 |
gatgggcggtggttgataccgtgtttacagtgcttgtttttttggagtttgttttaggtggttatgt |
31971916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 10244289 - 10244480
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||| | |||| ||||||||||| |||||||| || |||||||||||||||||||| |||||||||| ||||| || ||| |
|
|
| T |
10244289 |
ggaggtcgcgaggtttgtgatagttgcatgatccttcggttaggtgctctttgaattgtggctcagcttgggtgtttgggtctgggatttttagttggag |
10244388 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||||||||| || ||||||| |||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
10244389 |
ggtggtctttgtgggtgagtagtgacgatgggcgatggtggataccatgtttacggtgcttatttttt-ggagtttgttttaggtggtgatgt |
10244480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 5860262 - 5860095
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||||| |||| |||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
5860262 |
ggaggtcgcgaggtttgtgatagctgcatgatccttcagttaggtgctcttcgaaatgtggctcagcttgggtgttggggtctgggagttttattttcag |
5860163 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttttt |
184 |
Q |
| |
|
|||||||||||| | |||||||||||||||||| |||||| || ||||||| | |||||||||||||| |
|
|
| T |
5860162 |
ggtgttctttgtggatgagtagtgacgatgggcaatggtgaataccgtgttaatagtgcttgtttttt |
5860095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 37795096 - 37795263
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||||| |||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
37795096 |
ggaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaactgtggctcagcttgggtgttggggtttgagagttttattttgag |
37795195 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttttt |
184 |
Q |
| |
|
|||||||||||| | | |||||| | |||||||| |||||||| ||||||||||||||||| |||||| |
|
|
| T |
37795196 |
ggtgttctttgtggttaagtagtaatgatgggcggtggtggataccgtgtttacagtgcttttttttt |
37795263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 43 - 209
Target Start/End: Original strand, 3867249 - 3867415
Alignment:
| Q |
43 |
catggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgagggtgttctttgtaggtgagtagtgac |
142 |
Q |
| |
|
|||| ||||| ||| | ||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
3867249 |
catgatcctttggtcaggtgctcttcgatatgtggctcagcttgggtgttggagtatggaagttttattttgagggtgttctttgggggtgagtagtgac |
3867348 |
T |
|
| Q |
143 |
gatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
||||| || |||||||| |||||||||||| || || | |||||||||||| ||||||||||| |
|
|
| T |
3867349 |
gatggacggtggtggatatcgtgtttacagttgtttttgtgaaggagtttgttttgggtggtgatgt |
3867415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 3419628 - 3419441
Alignment:
| Q |
18 |
gaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgagg |
117 |
Q |
| |
|
|||||| | ||||||||| ||||| | || ||||||||||| |||| |||||| ||||||| | ||||||||||||||| ||||||||||||||| ||| |
|
|
| T |
3419628 |
gaggtcacaaggtttgtgatagctgcttgatccttcggttaggtgcgcttcgaattgtggcttaacttgggtgttggggtttgggagttttattttaagg |
3419529 |
T |
|
| Q |
118 |
gtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtg |
205 |
Q |
| |
|
||||||||||| |||||||||||||||| || |||||||| | |||||||| || ||||||||| ||| | |||||||||||||| |
|
|
| T |
3419528 |
gtgttctttgtgagtgagtagtgacgatgaacggtggtggatatcatgtttacaatgnttgtttttttggattctgttttaggtggtg |
3419441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 209
Target Start/End: Original strand, 25160918 - 25161109
Alignment:
| Q |
15 |
ttggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttg |
114 |
Q |
| |
|
||||||||| | ||||||||| ||||| || |||||| |||| |||||||| || |||||||||| ||| | |||||||||||| ||||||| ||| |
|
|
| T |
25160918 |
ttggaggtctcaaggtttgtgatagctgtgtgatccttcagttaggtgctcttggaaatgtggctcaacttagatgttggggtctgagagtttt--ttta |
25161015 |
T |
|
| Q |
115 |
agggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
| |||||||||||| ||||||||||||||||||||| |||||||| | |||||||| |||||||||||| | ||| |||||||||||||||||| |
|
|
| T |
25161016 |
aaggtgttctttgtgggtgagtagtgacgatgggcgttggtggatactatgtttacattgcttgtttttt-gaagtctgttttaggtggtgatgt |
25161109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 33435217 - 33435337
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||| ||| ||||||||| ||||||||| | ||||||||||| ||||||||||||||| ||||| |||||| ||||||| ||||||| |
|
|
| T |
33435217 |
ggaggtcgcgaggtt-gtgaaagctacatgatccttcggtcaggtgctcttcgaattgtggctcagcttggttgttgaggtctgagagttttcttttgag |
33435315 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtag |
138 |
Q |
| |
|
||||||||||| ||||||||| |
|
|
| T |
33435316 |
ggtgttctttgggggtgagtag |
33435337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 73 - 205
Target Start/End: Complemental strand, 3419314 - 3419182
Alignment:
| Q |
73 |
tgtggctcagcttgggtgttggggtctgggagttttattttgagggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacag |
172 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||||||||||| |||||||| ||||| ||||||||||| |||| || |||||||| | |||||||| |
|
|
| T |
3419314 |
tgtggcttaacttgggtgttggggtttgggagttttattttaagggtgttttttgtgagtgagtagtgatgatgaacggtggtggatatcatgtttacaa |
3419215 |
T |
|
| Q |
173 |
tgcttgttttttgggagtttgttttaggtggtg |
205 |
Q |
| |
|
|||||||||||| ||| | |||||||||||||| |
|
|
| T |
3419214 |
tgcttgtttttttggattctgttttaggtggtg |
3419182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 40726392 - 40726286
Alignment:
| Q |
103 |
agttttattttgagggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttg-ttttttgggagtttgttttaggt |
201 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| ||| |||| |||||||| |||||||||| ||||||| |||||| ||||| |||||||||| |
|
|
| T |
40726392 |
agttttattttgagggtgttctttgt-ggtgagtagtgatgataggcggtggtggataccgtgtttaccgtgcttgatttttttggagtctgttttaggt |
40726294 |
T |
|
| Q |
202 |
ggtgatgt |
209 |
Q |
| |
|
||| |||| |
|
|
| T |
40726293 |
ggtaatgt |
40726286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 146
Target Start/End: Original strand, 6585043 - 6585118
Alignment:
| Q |
72 |
atgtggctcagcttgggtgttggggtctgggagttttattttga-gggtgttctttgtaggtgagtagtgacgatg |
146 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| ||||| | |||| |||||||||||||||||| |
|
|
| T |
6585043 |
atgtggctcagcttgggtgttgaagtctgggagttttattttgaggggtgctatttggaggtgagtagtgacgatg |
6585118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 41089721 - 41089556
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||| ||| |||| |||| | ||||| | | ||||||||||| ||| ||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
41089721 |
ggaggtcgcgaggtt-gtggaagctgcatgattcttcgttgaggtgctcttcgaagtgtagctcaagatgggtgttagggtctgggagttttattttgag |
41089623 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttttt |
184 |
Q |
| |
|
||||||||||| ||| | ||||||| ||||||| |||| ||| | ||||||||| |||||||||| |
|
|
| T |
41089622 |
ggtgttctttgcgggt-aatagtgacaatgggcggtggtagatactgtgtttacatgacttgtttttt |
41089556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 34390123 - 34390200
Alignment:
| Q |
72 |
atgtggctcagcttgggtgttggggtctgggagttttattttga-gggtgttctttgtaggtgagtagtgacgatggg |
148 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||||||||||| |||||||||||| | ||||||||||||||||| |
|
|
| T |
34390123 |
atgtggctcaacttgggtgttgtagtctgggagttttattttgaggggtgttctttggggatgagtagtgacgatggg |
34390200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 169
Target Start/End: Complemental strand, 35745779 - 35745644
Alignment:
| Q |
38 |
agctacatggtccttcggttaagtgctcttcgatat---gtggctcagcttgggtgttggggtctgggagttttattttgag-ggtgttctttgtaggtg |
133 |
Q |
| |
|
|||| |||| || |||||||| | ||| |||||||| |||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |||| |
|
|
| T |
35745779 |
agctgcatgttcattcggttaggagcttttcgatatatagtggctcagcttgggtgttgaagtctgactgttttattttgagaggtgttctttgggggtg |
35745680 |
T |
|
| Q |
134 |
agtagtgacgatgggcgatggtggatgccgtgttta |
169 |
Q |
| |
|
||||||||||||||| | |||||||| ||||||| |
|
|
| T |
35745679 |
agtagtgacgatgggtgggggtggatgttgtgttta |
35745644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 135; Significance: 2e-70; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 17 - 199
Target Start/End: Original strand, 10524207 - 10524388
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
10524207 |
ggaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgatatgtggctcagcttgggtgttggggtttgggagttttatttggag |
10524306 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttag |
199 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
10524307 |
ggtgttctttgtgggtgagtagtgacgatgggcggtggtggataccgtgtttacggtgcttgtttttt-ggagtttgttttag |
10524388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 39338839 - 39338673
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||||| ||| ||||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
39338839 |
ggaggtcgcgaggtttgtgatagctgaatgatccttcggttaggtgctcttcgaattgtgactcagcttgggtgttgaggtctgggagttttattttgag |
39338740 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttttt |
184 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
39338739 |
ggtgttctttgtgggtgagtagtgacgatgggcgatggtggat-acttgtttacagtgcttgtttttt |
39338673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 15 - 184
Target Start/End: Complemental strand, 17116856 - 17116686
Alignment:
| Q |
15 |
ttggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagtttt-atttt |
113 |
Q |
| |
|
||||||||||||||||||||| || |||| || ||| ||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
17116856 |
ttggaggtcgcgaggtttgtgatatctacttgatccatcggttaggtgctcttcgtaatgtggctcagcttgggtgttggggtctgagagtttttatttt |
17116757 |
T |
|
| Q |
114 |
gagggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttttt |
184 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||||| |||||||| ||||||||||||||||| |||||| |
|
|
| T |
17116756 |
gagggtgttctttgtgggtgagtaatgacgatgggcggtggtggataccgtgtttacagtgcttttttttt |
17116686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 60 - 209
Target Start/End: Original strand, 387324 - 387476
Alignment:
| Q |
60 |
gtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgagggtgttctttgtaggtgagtagtgacgatgggcgatggtggat |
159 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||| || |
|
|
| T |
387324 |
gtgctcttcgataggtggctcagcttgggtgttggggtctgggagttttattttgagggtgttctttgggggtgaatagtgacgatgggcggtggtgaat |
387423 |
T |
|
| Q |
160 |
gccgtgtttacagtgcttgttttt-tg--ggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
||||||||| ||||||||||| || ||||| |||||||||||||||||| |
|
|
| T |
387424 |
tttgtgtttacaatgcttgtttttgtgaaggagtctgttttaggtggtgatgt |
387476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 72 - 181
Target Start/End: Original strand, 7874452 - 7874561
Alignment:
| Q |
72 |
atgtggctcagcttgggtgttggggtctgggagttttattttgaggg-tgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttac |
170 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||| ||||||||| ||||||||||||||||||| | | |||||| | |||||||| |
|
|
| T |
7874452 |
atgtggctcagcttgggtgttgaagtcttggagttttattttgagggatgttctttg-gggtgagtagtgacgatgggtggttgtggatactgtgtttac |
7874550 |
T |
|
| Q |
171 |
agtgcttgttt |
181 |
Q |
| |
|
|||| |||||| |
|
|
| T |
7874551 |
agtgtttgttt |
7874561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 14106462 - 14106332
Alignment:
| Q |
51 |
ttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttga-gggtgttctttgtaggtgagtagtgacgatgggc |
149 |
Q |
| |
|
|||||||||| ||| | ||| |||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| ||||||||||||||||| | |
|
|
| T |
14106462 |
ttcggttaagagctttacga-atgtggctcagcttgggtgttgaagtctgagagttttattttgaggggtgttctttgggggtgagtagtgacgatgagt |
14106364 |
T |
|
| Q |
150 |
gatggtggatgccgtgtttacagtgcttgttt |
181 |
Q |
| |
|
| | |||||| | ||||||||| || |||||| |
|
|
| T |
14106363 |
ggttgtggatactgtgtttacaatgtttgttt |
14106332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 181
Target Start/End: Original strand, 7460837 - 7460947
Alignment:
| Q |
72 |
atgtggctcagcttgggtgttggggtctgggagttttattttga-gggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttac |
170 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| |||||||||||| | ||||||||||||||| | | | |||||| |||||||| |
|
|
| T |
7460837 |
atgtggctcagcttgggtgttgaagtctgggagttttattttgaggggtgttctttggggttgagtagtgacgatgtgtggttgtggatattgtgtttac |
7460936 |
T |
|
| Q |
171 |
agtgcttgttt |
181 |
Q |
| |
|
|||| |||||| |
|
|
| T |
7460937 |
agtgtttgttt |
7460947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 181
Target Start/End: Original strand, 5254417 - 5254522
Alignment:
| Q |
72 |
atgtggctcagcttgggtgttggggtctgggagttttattttgaggg-tgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttac |
170 |
Q |
| |
|
||||||||||| |||||||||| ||||| ||||||| ||||||| ||||||||| ||||||||||||||||||| | | |||||| | |||||||| |
|
|
| T |
5254417 |
atgtggctcagtttgggtgttgaagtctgagagtttt---ttgaggggtgttctttg--ggtgagtagtgacgatgggtggttgtggatactgtgtttac |
5254511 |
T |
|
| Q |
171 |
agtgcttgttt |
181 |
Q |
| |
|
|||| |||||| |
|
|
| T |
5254512 |
agtgtttgttt |
5254522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 158
Target Start/End: Original strand, 14405359 - 14405447
Alignment:
| Q |
72 |
atgtggctcagcttgggtgttggggtctgggagttttattttgaggg-tgttc-tttgtaggtgagtagtgacgatgggcgatggtgga |
158 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||| ||| ||||| |
|
|
| T |
14405359 |
atgtggctcgacttgggtgttgaagtctgggagttttattttgagggatgttcttttgggggtgagtagtgacaatgggtgattgtgga |
14405447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 10173499 - 10173425
Alignment:
| Q |
72 |
atgtggctcagcttgggtgttggggtctgggagttttattttgagg-gtgttctttgtaggtgagtagtgacgatg |
146 |
Q |
| |
|
|||||||||||||| ||||||| || ||| |||||| ||||||||| || ||||||| ||||||||||||||||| |
|
|
| T |
10173499 |
atgtggctcagctttggtgttgaggactgagagtttaattttgaggagtattctttg-gggtgagtagtgacgatg |
10173425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 16952304 - 16952229
Alignment:
| Q |
72 |
atgtggctcagcttgggtgttggggtctgggagttttattttgaggg-tgttctttgtaggtgagtagtgacgatg |
146 |
Q |
| |
|
|||||| ||| ||| ||||||| || |||||||||| |||| ||||| ||||||||| ||||||||||||||||| |
|
|
| T |
16952304 |
atgtggatcaactttggtgttgaggactgggagtttcatttagaggggtgttctttgggggtgagtagtgacgatg |
16952229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 17022969 - 17022894
Alignment:
| Q |
72 |
atgtggctcagcttgggtgttggggtctgggagttttattttgaggg-tgttctttgtaggtgagtagtgacgatg |
146 |
Q |
| |
|
|||||| ||| ||| ||||||| || |||||||||| |||| ||||| ||||||||| ||||||||||||||||| |
|
|
| T |
17022969 |
atgtggatcaactttggtgttgaggactgggagtttcatttagaggggtgttctttgggggtgagtagtgacgatg |
17022894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 17060275 - 17060200
Alignment:
| Q |
72 |
atgtggctcagcttgggtgttggggtctgggagttttattttgaggg-tgttctttgtaggtgagtagtgacgatg |
146 |
Q |
| |
|
|||||| ||| ||| ||||||| || |||||||||| |||| ||||| ||||||||| ||||||||||||||||| |
|
|
| T |
17060275 |
atgtggatcaactttggtgttgaggactgggagtttcatttagaggggtgttctttgggggtgagtagtgacgatg |
17060200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 130; Significance: 2e-67; HSPs: 16)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 20138533 - 20138726
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttatttt-ga |
115 |
Q |
| |
|
||||||||||||||||||| ||||| |||| ||||||||||| ||||||||||| ||||| | | |||||||||||||||||||||||||||||||| || |
|
|
| T |
20138533 |
ggaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaaatgtgacccggcttgggtgttggggtctgggagttttatttttga |
20138632 |
T |
|
| Q |
116 |
gggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||| |
|
|
| T |
20138633 |
gggtgttctttgtaggtgagtagtgacgatggacggtggtggataccgtgtttacagtgcttgattttttggagtctgttttaggtggtgatgt |
20138726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 24995368 - 24995179
Alignment:
| Q |
18 |
gaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttgggg-tctgggagttttattttgag |
116 |
Q |
| |
|
|||||||||||||||||| ||||| |||| ||||||||||| ||||||||||| || |||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
24995368 |
gaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaaatatggctcagcttgggtgttgggggtctaggagttttattttgag |
24995269 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtga |
206 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||||||| |||| |||||||||||||||| |
|
|
| T |
24995268 |
ggtgttctttgtgcgtgagtagtgacgatgggcggtggtggataccgtgtttacaatgcttgtttttttggagattgttttaggtggtga |
24995179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 31207336 - 31207143
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||||| ||| |||||||||| ||||||||||| ||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
31207336 |
ggaggtcgcgaggtttgtgatagctgaatgacccttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggagtatgggagttttattttgag |
31207237 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgc-ttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||| || |||||| |||| |||||||||||||||||| |
|
|
| T |
31207236 |
ggtgttctttgtgggtgagtagtgacgatgggcgatggtggatactgtgtttacagtgcttttttttttttgagtctgttttaggtggtgatgt |
31207143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 12898248 - 12898057
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||||| | || ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
12898248 |
ggaggtcgcgaggtttgtgatagctgc-tgatccttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggggtcttagagttttattttgag |
12898150 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||||| ||||||||||||||||| || | |||||| || ||||| || | ||||||||| |||||||||||||||||||||||| |
|
|
| T |
12898149 |
ggtgttctttgtgggtgagtagtgacgatgaacggttgtggattccatgtttgcatggattgtttttttggagtttgttttaggtggtgatgt |
12898057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 37986832 - 37986665
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||||| | || ||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| |
|
|
| T |
37986832 |
ggaggtcgcgaggtttgtgatagctgcctgatccttcggttaggtgctcttcgaaatgtggctcagcttgggtgtttcggtctgggagttttatttggag |
37986733 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttttt |
184 |
Q |
| |
|
|||||||||||| |||||||| |||||||||| | |||| ||| ||||||||||| |||||||||||| |
|
|
| T |
37986732 |
ggtgttctttgtgggtgagtaatgacgatgggtggtggtagataccgtgtttacaatgcttgtttttt |
37986665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 9519606 - 9519774
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttgggg-tctgggagttttattttga |
115 |
Q |
| |
|
|||||| |||| ||||||| ||||| |||| || |||||||| ||||||||||| || |||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
9519606 |
ggaggttgcgaagtttgtgatagctgcatgatcattcggttaggtgctcttcgaaatatggctcagcttgggtgttgggggtctgagagttttattttga |
9519705 |
T |
|
| Q |
116 |
gggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttttt |
184 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| || |||||| |
|
|
| T |
9519706 |
gggtgttctttgtgggtgagtagtgacgatgggcggtggtggataccgtgtttacagtgattttttttt |
9519774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 34388977 - 34388788
Alignment:
| Q |
19 |
aggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgaggg |
118 |
Q |
| |
|
|||||| |||||||||| |||||| || |||||| |||| ||| ||||| |||||||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
34388977 |
aggtcgtgaggtttgtgatagctag-tgatccttcagttaggtgttcttcatcatgtggctcagcttgggtgttggggtatgagagttttattttgaggg |
34388879 |
T |
|
| Q |
119 |
tgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgc-ttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||| |||||||||||||||| |||| |||||||| |||||||||| ||| || |||||| |||||||||||||||||||||||| |
|
|
| T |
34388878 |
tgttctttgtgggtgagtagtgacgataggcggtggtggat-acgtgtttacattgctttctttttttggagtttgttttaggtggtgatgt |
34388788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 41893374 - 41893185
Alignment:
| Q |
18 |
gaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgagg |
117 |
Q |
| |
|
|||||||| ||||||||| ||||| |||| |||||| | | || |||||||| |||||||||||||||||||||| |||||||||||| |||||| ||| |
|
|
| T |
41893374 |
gaggtcgcaaggtttgtgatagctgcatgatccttctat-aggtactcttcgaaatgtggctcagcttgggtgttgaggtctgggagttctattttcagg |
41893276 |
T |
|
| Q |
118 |
gtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
||||||||||| |||||||||||||||||| || |||||||| ||||||||||||| |||||||||| ||| |||||||||| ||||||| |
|
|
| T |
41893275 |
gtgttctttgtgggtgagtagtgacgatggtcggtggtggataccgtgtttacagttcttgtttttt-ttagtctgttttaggtagtgatgt |
41893185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 32066268 - 32066065
Alignment:
| Q |
18 |
gaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgagg |
117 |
Q |
| |
|
||||| |||||||||||| ||||| |||| || |||||||| ||||||| || |||||| |||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
32066268 |
gaggttgcgaggtttgtgatagctgcatgatcattcggttagatgctctttgaaatgtggttcagcttgggtgttggggtctgagagttttatttggagg |
32066169 |
T |
|
| Q |
118 |
gtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtt------------tacagtgcttgttttttgggagtttgttttaggtggtg |
205 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||||||| | ||||| ||||||| | ||||||| |||||||||||||||||||| |
|
|
| T |
32066168 |
gtgttctttgtgagtgagtagtgacgatgggcggtggtggatacagtgttggttgtggtggatacagtgttggtttttttggagtttgttttaggtggtg |
32066069 |
T |
|
| Q |
206 |
atgt |
209 |
Q |
| |
|
|||| |
|
|
| T |
32066068 |
atgt |
32066065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 22773604 - 22773699
Alignment:
| Q |
15 |
ttggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttat |
110 |
Q |
| |
|
||||||||| ||||||||||| || ||||||| |||||| |||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
22773604 |
ttggaggtcacgaggtttgtgatatctacatgatccttctgttaggtgctcttcgaaatgtggctcagtttgggtgttggggtctgggagttttat |
22773699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 36630945 - 36631123
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||| ||| |||| |||| ||||||||| | ||||||||||| |||||||||| ||||| ||| |||||||| | |||||| |||| | |
|
|
| T |
36630945 |
ggaggtcgcgaggtt-gtgggagctgcatgatccttcggtcaggtgctcttcgaaatgtggctcaacttggatgtgggggtctgcgtgttttagtttggg |
36631043 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||| |||||| |||||||||| |||||||| |||||||||||||| ||||||||| ||||| |||||||||||||||||| |
|
|
| T |
36631044 |
ggtg-------------agtagttacgatgggcggtggtggataccgtgtttacagtgtttgtttttttggagtctgttttaggtggtgatgt |
36631123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 16457367 - 16457282
Alignment:
| Q |
99 |
tgggagttttattttgagggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttttt |
184 |
Q |
| |
|
||||||||||||||| |||||| ||||| | |||||||||||||||||| || |||||||| |||||||||||||||||||||||| |
|
|
| T |
16457367 |
tgggagttttattttcagggtggtctttatgggtgagtagtgacgatggacggtggtggataccgtgtttacagtgcttgtttttt |
16457282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 22773815 - 22773889
Alignment:
| Q |
110 |
ttttgagggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttttt |
184 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||| |||||| | || |||||||| |||||||||||| |
|
|
| T |
22773815 |
ttttgagggtgttctttgtgggtgagtagtgacgatgggcagtggtggttaccatgtttacaatgcttgtttttt |
22773889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 35821432 - 35821514
Alignment:
| Q |
102 |
gagttttattttgagggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttttt |
184 |
Q |
| |
|
|||||||||||| ||||||||||||| | |||||||||| |||||||| || | ||| | |||||||||||||||||||||| |
|
|
| T |
35821432 |
gagttttattttaagggtgttctttgaggatgagtagtgatgatgggcggtgctagatactgtgtttacagtgcttgtttttt |
35821514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 174
Target Start/End: Complemental strand, 38577699 - 38577606
Alignment:
| Q |
83 |
cttgggtgttggggtctggg-agttttattttgagg-gtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtg |
174 |
Q |
| |
|
||||||||||| ||||||| |||||||||||| || |||||||||| | |||||||||||||||| ||| |||||| | |||||||||||| |
|
|
| T |
38577699 |
cttgggtgttgaagtctggggagttttattttgtggagtgttctttggggatgagtagtgacgatggatgattgtggatactgtgtttacagtg |
38577606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 15821299 - 15821244
Alignment:
| Q |
72 |
atgtggctcagcttgggtgttggggtctgggagttttattttgagg-gtgttcttt |
126 |
Q |
| |
|
||||||||||||| || ||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
15821299 |
atgtggctcagctcggatgttgaagtctgggagttttattttgaggagtgttcttt |
15821244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 129; Significance: 6e-67; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 18593350 - 18593542
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
|||||||||||| |||||| ||| | |||| ||||||||||| ||| ||||||| |||||||||| |||||||||||||||||||||||||||||| ||| |
|
|
| T |
18593350 |
ggaggtcgcgagatttgtgataggtgcatgatccttcggttaggtgttcttcgaaatgtggctcaacttgggtgttggggtctgggagttttatttggag |
18593449 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
18593450 |
gatgttctttgtgggtgagtagtgacgatgggcggtggtggataccgtgtttacagtgcttgtttttttggagtttgtgttaggtggtgatgt |
18593542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 698469 - 698659
Alignment:
| Q |
18 |
gaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgagg |
117 |
Q |
| |
|
||||| |||||||||||| ||||| ||| ||||||||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
698469 |
gaggttgcgaggtttgtgatagctgcataatccttcggttaggtgctctttgaaatgtggctcagcttgggtgttggggtctgagagttttatttggagg |
698568 |
T |
|
| Q |
118 |
gtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||||||||| ||| ||||||||| | ||||||| ||||||||||||| |||||||||| |
|
|
| T |
698569 |
gtgttctttgtgggtgagtagtgacgatcggcgatggtggataccg-atttacagtgttggtttttttggagtttgttttaagtggtgatgt |
698659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 34378205 - 34378399
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||| | || ||||||||||| ||||||||| |||||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
34378205 |
ggaggtcgcgaggtttgtgatagttgtttgatccttcggttagatgctcttcgtaatgtggctcagcttgggtgttggggtttgagagttttattttgag |
34378304 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttggg---agtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||||| |||||||||||||||||| || |||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
34378305 |
ggtgttctttgtgggtgagtagtgacgatggacggtggtggataccgtgtttaca-tgcttgttttttttttttagtttgttttaggtggtgatgt |
34378399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 29087589 - 29087778
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||| || ||||| |||| ||||| ||| | |||||||||| ||||||||||| ||| | |||||||||||||||| ||||||||||| |
|
|
| T |
29087589 |
ggaggtcgcgaggtta-tggtagctccatgatcctttggtcaggtgctcttcg-tatgtggctcaacttagatgttggggtctgggagctttattttgag |
29087686 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
||| |||||| ||||||||||||||||||||| ||||| || |||||||||||||||||||||||| ||||| ||||||||||| |||||| |
|
|
| T |
29087687 |
ggt-ttctttaggggtgagtagtgacgatgggcggtggtgaataccgtgtttacagtgcttgtttttttggagtctgttttaggtgctgatgt |
29087778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 38 - 209
Target Start/End: Complemental strand, 7161969 - 7161795
Alignment:
| Q |
38 |
agctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgagggtgttctttgtaggtgagta |
137 |
Q |
| |
|
|||| |||| ||||| ||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
7161969 |
agctgcatgatcctttggtcaggtgttcttcgatatgtggctcagcttgtgtgttggggtctgggagttttattttgatggtgttctttgggggtgagta |
7161870 |
T |
|
| Q |
138 |
gtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttt-tg--ggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||| |||| | ||||||| |||||||||||||||||||||| || ||||| |||||||||| ||||||| |
|
|
| T |
7161869 |
gtgacgttgggtggtggtggaaatcgtgtttacagtgcttgtttttgtgaaggagtctgttttaggtagtgatgt |
7161795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 18313614 - 18313425
Alignment:
| Q |
19 |
aggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgaggg |
118 |
Q |
| |
|
||||||||||||||||| ||||| |||| || |||| ||| ||||||||||| |||||||| || |||||| || || | | |||||||| ||| |||| |
|
|
| T |
18313614 |
aggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggcttagtttgggttttaggattttggagtttttcttt-aggg |
18313516 |
T |
|
| Q |
119 |
tgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
||||||| | ||||||||||||||||| | | || ||||| ||||||||| ||| ||||||||| ||||| |||||||||||||||||| |
|
|
| T |
18313515 |
tgttcttcatgggtgagtagtgacgatgagtggtgatggatatcgtgtttacggtgtttgtttttttggagtctgttttaggtggtgatgt |
18313425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 7451601 - 7451672
Alignment:
| Q |
138 |
gtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||| | |||||||| |||||||| ||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
7451601 |
gtgacgatggaaggtggtggataccgtgtttgcagtgcttgtttttttggagtttgtgttaggtggtgatgt |
7451672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 125; Significance: 1e-64; HSPs: 17)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 47235806 - 47235998
Alignment:
| Q |
18 |
gaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgagg |
117 |
Q |
| |
|
|||||||||||||||||| ||||| |||| ||||||||||| ||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
47235806 |
gaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaaatgtggttcagcttgggtgttggggtctgcgagttttattttgagg |
47235905 |
T |
|
| Q |
118 |
gtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttggga-gtttgttttaggtggtgatgt |
209 |
Q |
| |
|
||||||||||| |||||||||||||||||| || |||||||| |||||||||||||||||||||||| | || |||||||||||||||||| |
|
|
| T |
47235906 |
gtgttctttgtgggtgagtagtgacgatggacggtggtggataccgtgtttacagtgcttgtttttttttaagtctgttttaggtggtgatgt |
47235998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 15 - 209
Target Start/End: Original strand, 53248005 - 53248200
Alignment:
| Q |
15 |
ttggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagtttt-atttt |
113 |
Q |
| |
|
||||||||||||||||||||| ||| | ||| ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||||| |
|
|
| T |
53248005 |
ttggaggtcgcgaggtttgtgatagttgtatgatccttcggttatgtgctcttcgaaatgtggctcagtttgggtgttggggtctgagagtttttatttt |
53248104 |
T |
|
| Q |
114 |
gagggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
||| ||||||||||| ||||||||||||||||||||| |||||| | |||||||||||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
53248105 |
gagagtgttctttgtgggtgagtagtgacgatgggcggtggtggttaccgtgtttacagtgcttgtttttttggagtctgttttaggtggtgatgt |
53248200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 45163962 - 45164154
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||| ||| ||||||| ||||| |||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||| |
|
|
| T |
45163962 |
ggaggtcacgaagtttgtgatagctgcatgatccttcggttaggtgctcttcgaaatgtggcttagcttgggtgttggggtctaggagttttattttgag |
45164061 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||| || || || ||||||||||| ||||||||| || ||||| | |||||||||||||||| |
|
|
| T |
45164062 |
ggtgttatttgtaggtgattagtgacgatgggcggtgatgaataccgtgtttacaatgcttgtttctttggagtctattttaggtggtgatgt |
45164154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 15 - 209
Target Start/End: Complemental strand, 34475730 - 34475539
Alignment:
| Q |
15 |
ttggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttg |
114 |
Q |
| |
|
||||||||||||||||||||| ||||| ||| ||||||||||| ||||||||||| ||||| |||||||| ||||||||||| || ||||||| ||| |
|
|
| T |
34475730 |
ttggaggtcgcgaggtttgtgatagctgtatgatccttcggttaggtgctcttcgaaatgtgactcagcttaggtgttggggtatgagagtttt--ttta |
34475633 |
T |
|
| Q |
115 |
agggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
34475632 |
agggtgttctttgtgggtgagtagtgacgatgggcggtggtggataccgtgtttacattgcttgtttttt-ggagtctgttttaggtggtgatgt |
34475539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 20611890 - 20612054
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||||| ||| ||||||||||| ||||||||||| ||||| |||||||||||||||||| ||| ||||||||||| |||| |
|
|
| T |
20611890 |
ggaggtcgcgaggtttgtgatagctgaatgatccttcggttaggtgctcttcgaaatgtgactcagcttgggtgttggg-tctaggagttttattctgag |
20611988 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttt |
182 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
20611989 |
ggtgttctttgtgggtgagtagtgacgatgggcgatggtggatactgtgtttacagtgcttgtttt |
20612054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 2392480 - 2392313
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||||| |||| ||||||||||| | |||||| | |||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
2392480 |
ggaggtcgcgaggtttgtgctagctgcatgatccttcggttaggatctcttcaaaatgtggctcagcttgggtgttggggtctaggagttttattttgta |
2392381 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttttt |
184 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| |
|
|
| T |
2392380 |
ggtgttatttgtgggtgagtagtgacgatgggcggtggtggataccgtgtttacagtgcttttttttt |
2392313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 2394244 - 2394077
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||||| |||| ||||||||||| | |||||| | |||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
2394244 |
ggaggtcgcgaggtttgtgctagctgcatgatccttcggttaggatctcttcaaaatgtggctcagcttgggtgttggggtctaggagttttattttgta |
2394145 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttttt |
184 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| |
|
|
| T |
2394144 |
ggtgttatttgtgggtgagtagtgacgatgggcggtggtggataccgtgtttacagtgcttttttttt |
2394077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 209
Target Start/End: Original strand, 31482989 - 31483180
Alignment:
| Q |
15 |
ttggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttg |
114 |
Q |
| |
|
||||||||||||||||||||| ||||| |||| ||||||||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| |||| |
|
|
| T |
31482989 |
ttggaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaaatgtggctcagcttaggtgttggggtttgagagtttt-tttta |
31483087 |
T |
|
| Q |
115 |
agggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||| | |||||||| || |||||||| |||| |||||| ||||||||||||||| |||||||| |
|
|
| T |
31483088 |
agggtgttctttgtgggttagtagtgacgatgaacagtggtggataccatgtttacattgct--tttttttggagtttgttttaggcggtgatgt |
31483180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 43012484 - 43012678
Alignment:
| Q |
18 |
gaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgagg |
117 |
Q |
| |
|
|||||||||||||| ||| || | |||| || |||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
43012484 |
gaggtcgcgaggtt-gtggaagttgcatgatcgttcggtcaggtgctcttcgaaatgtggctcagcttgggtgttggggtctaggagttttaatttgagg |
43012582 |
T |
|
| Q |
118 |
gtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttt-tg--ggagtttgttttaggtggtgatgtc |
210 |
Q |
| |
|
|||||||||| |||||||||||| |||||| || ||||||| ||||||||||| ||||||||||| || ||||| |||||||| |||||||||| |
|
|
| T |
43012583 |
gtgttctttggaggtgagtagtggcgatggacgggggtggataccgtgtttacaatgcttgtttttgtgaaggagtctgttttagatggtgatgtc |
43012678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 17551064 - 17551226
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||||| |||| | ||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
17551064 |
ggaggtcgcgaggtttgtgatagctgcatgat-----ggttaggtgctcttcgaaatgtggctcagtttgggtgttggggtctgagagttttattttgag |
17551158 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttttt |
184 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |||||| | || ||||| | |||||||||||| |
|
|
| T |
17551159 |
ggtgttctttgtcggtgagtagtgacgatgggcggtggtggttaccttgtttgtaatgcttgtttttt |
17551226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 19176645 - 19176806
Alignment:
| Q |
51 |
ttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgagggtgttctttgtaggtgagtagtgacgatgggcg |
150 |
Q |
| |
|
|||||| | |||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||| | |
|
|
| T |
19176645 |
ttcggtcaggtgctcttcgtaatgtggctcagcttgggtgtcggggtctgggtgttttattttgagggtgttctttaggggtgagtagtgacgatggatg |
19176744 |
T |
|
| Q |
151 |
atggtggatgccgtgtttacagtgcttg---ttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||| | |||||||| ||||||| |||||| ||||| ||||||||||||| |||| |
|
|
| T |
19176745 |
gtggtggatactgtgtttactgtgcttgttttttttttggagtctgttttaggtggttatgt |
19176806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 9583997 - 9583862
Alignment:
| Q |
48 |
tccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgagggtgttctttgtaggtgagtagtgacgatgg |
147 |
Q |
| |
|
||||||||| | | ||||||||| |||||||| |||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||| | |
|
|
| T |
9583997 |
tccttcggtcaggcgctcttcgaattgtggctctgcttgggttttggggtctgggagttttattttgaggatgttctttg-cggtgagtagtgacgatag |
9583899 |
T |
|
| Q |
148 |
gcgatggtggatgccgtgtttacagtgcttgtttttt |
184 |
Q |
| |
|
||| |||||||| ||||||||| ||||||||||||| |
|
|
| T |
9583898 |
gcggtggtggatatcgtgtttacggtgcttgtttttt |
9583862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 184
Target Start/End: Complemental strand, 30352358 - 30352248
Alignment:
| Q |
72 |
atgtggctcagcttgggtgttggggtctgggagttttattttgagggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttaca |
171 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| | ||||||||||||||||| | |||||||| ||||||||||| |
|
|
| T |
30352358 |
atgtggctcagcttgggtgttggggtctcggagtttttttt--agggtgttctttgtggatgagtagtgacgatgggtggtggtggataccgtgtttaca |
30352261 |
T |
|
| Q |
172 |
gtgcttgtttttt |
184 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
30352260 |
gtacttgtttttt |
30352248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 23328290 - 23328160
Alignment:
| Q |
51 |
ttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag-ggtgttctttgtaggtgagtagtgacgatgggc |
149 |
Q |
| |
|
|||||||| | ||| ||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
23328290 |
ttcggttaggagcttttcga-atgtggctcagcttgggtgttgaagtctgggagttttattttgagtggtgttctttgggggtgagtagtgacgatgggt |
23328192 |
T |
|
| Q |
150 |
gatggtggatgccgtgtttacagtgcttgttt |
181 |
Q |
| |
|
| | |||||| ||| |||||||| |||||| |
|
|
| T |
23328191 |
ggttgtggatattgtgcttacagtgtttgttt |
23328160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 174
Target Start/End: Complemental strand, 40023525 - 40023389
Alignment:
| Q |
38 |
agctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttga-gggtgttctttgtaggtgagt |
136 |
Q |
| |
|
|||| |||| || |||||||| | ||| ||||| ||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||| | ||||| |
|
|
| T |
40023525 |
agctgcatgttcattcggttaggagcttttcga-atgtggctcagctagggtgttgtagtctgggagttttattttgaggggcgttcttttgggatgagt |
40023427 |
T |
|
| Q |
137 |
agtgacgatgggcgatggtggatgccgtgtttacagtg |
174 |
Q |
| |
|
||||||||||| | | |||||| |||||||||||||| |
|
|
| T |
40023426 |
agtgacgatggatggttgtggataccgtgtttacagtg |
40023389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 7105019 - 7105113
Alignment:
| Q |
89 |
tgttggggtctgggagttttattttgaggg-tgtt-ctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttt |
182 |
Q |
| |
|
|||| ||| |||||||||||||||| |||| |||| ||||| ||||||||||||||||||| | |||||||| | || |||| |||||||||||| |
|
|
| T |
7105019 |
tgttagggactgggagttttattttaaggggtgtttctttgg-ggtgagtagtgacgatgggtggtggtggatactgtttttatagtgcttgtttt |
7105113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 45398904 - 45399060
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
|||||||| |||||| ||| |||| |||| || |||||||| | ||| ||||| ||||||| || ||| ||||||| || |||||||| ||||||| | |
|
|
| T |
45398904 |
ggaggtcgagaggtt-gtggaagctgcatgttcattcggttatgagcttttcga-atgtggcgcaacttaggtgttgaagtttgggagttctattttgtg |
45399001 |
T |
|
| Q |
117 |
gg-tgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtg |
174 |
Q |
| |
|
|| ||||| ||| |||||||||||||||||| ||| |||||| |||||||||||| |
|
|
| T |
45399002 |
gggtgttcgttgggggtgagtagtgacgatggatgattgtggatattgtgtttacagtg |
45399060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 114; Significance: 5e-58; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 48 - 205
Target Start/End: Original strand, 10541970 - 10542127
Alignment:
| Q |
48 |
tccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgagggtgttctttgtaggtgagtagtgacgatgg |
147 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||| |||||||| |||||||||||||||||| |
|
|
| T |
10541970 |
tccttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggggtctggaagttttatttggagggtattctttgtgggtgagtagtgacgatgg |
10542069 |
T |
|
| Q |
148 |
gcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtg |
205 |
Q |
| |
|
||| |||||||| |||| |||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
10542070 |
gcggtggtggataccgtatttaaagtgcttgtttttttggagtttgttttaggtggtg |
10542127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 3117600 - 3117794
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||| | |||| ||||||| ||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| || |
|
|
| T |
3117600 |
ggaggtcgcgaggtttgtgatagttgcatgatccttcgattatgtgctcttcgaaatgtggctcaacttgggtgttggggtctgggagttttatttatag |
3117699 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttggg--agtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||||| ||| ||||| ||||||| ||| |||||| | |||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
3117700 |
ggtgttctttgtgggtaagtagagacgatgagcggtggtggttaccgtgtttacagtgcttgtttttttttttagtttgttttaggtggtgatgt |
3117794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 64 - 209
Target Start/End: Original strand, 14663231 - 14663380
Alignment:
| Q |
64 |
tcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgagggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccg |
163 |
Q |
| |
|
||||||| ||||||||| |||||| ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||| | |
|
|
| T |
14663231 |
tcttcgaaatgtggctcggcttggatgttggggtttgggagttttattttgaggatgttctttgcgggtgagtagtgacgatgggcggtggtggatattg |
14663330 |
T |
|
| Q |
164 |
tgtttacagtgctt----gttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||||||| |||||| ||||| |||||||||||||||||| |
|
|
| T |
14663331 |
tgtttacagtgctttttgttttttttggagtctgttttaggtggtgatgt |
14663380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 3254209 - 3254257
Alignment:
| Q |
161 |
ccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||| ||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
3254209 |
ccgtgtttacggtgcttgtttttttggagtctgttttaggtggtgatgt |
3254257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 110; Significance: 1e-55; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 8255134 - 8255327
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||||| | || ||| || |||| |||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
8255134 |
ggaggtcgcgaggtttgtgatagctgcttgatccatcagttaggtgctcttcgtaatgtggctcagcttgggtgttagggtctgtgagttttattttgag |
8255233 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttt-ttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||||| | |||||||||||||||||||| || ||||| |||||||||||||||||| |
|
|
| T |
8255234 |
ggtgttctttgtgggtgagtagtgacgatgggatgtggtggatactgtgtttacagtgcttgttttatttggagtctgttttaggtggtgatgt |
8255327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 8268552 - 8268745
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||||| | || ||| || |||| |||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
8268552 |
ggaggtcgcgaggtttgtgatagctgcttgatccatcagttaggtgctcttcgtaatgtggctcagcttgggtgttagggtctgtgagttttattttgag |
8268651 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttt-ttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||||| | |||||||||||||||||||| || ||||| |||||||||||||||||| |
|
|
| T |
8268652 |
ggtgttctttgtgggtgagtagtgacgatgggatgtggtggatactgtgtttacagtgcttgttttatttggagtctgttttaggtggtgatgt |
8268745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 30167538 - 30167346
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
|||||||||||||||| || ||||| |||| |||||||||||| ||||||||| ||||||| || ||||||||||||||| |||||||||||||||||| |
|
|
| T |
30167538 |
ggaggtcgcgaggtttatgatagctgcatgacccttcggttaagcgctcttcgaaatgtggcccaacttgggtgttggggtatgggagttttattttgag |
30167439 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttg-ttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||||| ||||||| |||||| | |||| |||||||| |||||||||||||||||| |||||| ||||| ||||||||| ||||||| |
|
|
| T |
30167438 |
ggtgttctttgtgggtgagtggtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttttttggagtctgttttaggatgtgatgt |
30167346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 30964548 - 30964737
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||||||||||||| ||||| |||| || |||||||| ||||||||||| ||||||| | ||||||||| | ||||||||||||||||||| |
|
|
| T |
30964548 |
ggaggtcgcgaggtttgtgatagctgcatgatcattcggttaggtgctcttcgaaatgtggccctgcttgggtggta----ctgggagttttattttgag |
30964643 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttg-ttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||| ||||| || ||| |||||||||| || |||||| ||||| |||||||||||||||||| |
|
|
| T |
30964644 |
ggtgttctttgtgggtgagtagtgatgatgggcggtggtgaatatcgtatttacagtgcgtgatttttttggagtctgttttaggtggtgatgt |
30964737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 8706061 - 8705951
Alignment:
| Q |
74 |
gtggctcagcttgggtgttggggtctgggagttttattttgagggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagt |
173 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||| | ||||||||||| |
|
|
| T |
8706061 |
gtggctcagcttgggtgttggggtctaagagttttattttgagggtgttctttgtgggtgggtagtgacgatgggcagtggtggatactgtgtttacagt |
8705962 |
T |
|
| Q |
174 |
gcttgtttttt |
184 |
Q |
| |
|
||||||||||| |
|
|
| T |
8705961 |
gcttgtttttt |
8705951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 20464786 - 20464889
Alignment:
| Q |
106 |
tttattttgagggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtg |
205 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||||||||| |||||||| |||||||||||| | ||||||||| | |||||||||||||||||| |
|
|
| T |
20464786 |
tttattttgagggtgttatttgggggtgagtagtgacgatgggcggtggtggataccgtgtttacagggtttgtttttttgaagtttgttttaggtggtg |
20464885 |
T |
|
| Q |
206 |
atgt |
209 |
Q |
| |
|
|||| |
|
|
| T |
20464886 |
atgt |
20464889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 4305833 - 4305951
Alignment:
| Q |
18 |
gaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgagg |
117 |
Q |
| |
|
|||||||| ||||||||| || || |||| ||||||||| | ||||||||||| |||||||||| ||||||| || |||| ||||||||||||||| ||| |
|
|
| T |
4305833 |
gaggtcgcaaggtttgtgataactgcatgatccttcggtgaggtgctcttcga-atgtggctcaacttgggtatttgggtttgggagttttattttcagg |
4305931 |
T |
|
| Q |
118 |
gtgttctttgtaggtgagta |
137 |
Q |
| |
|
||| ||||||| |||||||| |
|
|
| T |
4305932 |
gtgatctttgtgggtgagta |
4305951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 31050634 - 31050478
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
|||||||| |||||| ||| |||| |||| || |||||||| | ||| |||||| ||||||| ||||||||||||| |||||| ||||||||||||| |
|
|
| T |
31050634 |
ggaggtcgagaggtt-gtggaagctgcatgttcattcggttaggagcttttcgat-tgtggctaagcttgggtgttgaagtctggctgttttattttgag |
31050537 |
T |
|
| Q |
117 |
gg-tgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtg |
174 |
Q |
| |
|
|| ||||| ||| |||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
31050536 |
gggtgttccttgggggtgagtagtgacgatggatgatggtggatgttgtgtttacagtg |
31050478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 183
Target Start/End: Complemental strand, 35341258 - 35341148
Alignment:
| Q |
72 |
atgtggctcagcttgggtgttggggtctgggagttttattttgaggg-tgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttac |
170 |
Q |
| |
|
||||||||||| |||| ||||| || |||||||||||||||||||| |||||| || ||||||||||||||||||| | | | |||| | |||||||| |
|
|
| T |
35341258 |
atgtggctcagtttgg-tgttgaagtttgggagttttattttgaggggtgttctctgg-ggtgagtagtgacgatgggtggttgcggatactgtgtttac |
35341161 |
T |
|
| Q |
171 |
agtgcttgttttt |
183 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
35341160 |
agtgtttgttttt |
35341148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 2825946 - 2826020
Alignment:
| Q |
74 |
gtggctcagcttgggtgttggggtctgggagttttattttga-gggtgttctttgtaggtgagtagtgacgatggg |
148 |
Q |
| |
|
|||| |||| |||||||||| || ||||||||||||||||| ||||||||| || ||||||||||||||||||| |
|
|
| T |
2825946 |
gtggttcagtttgggtgttgaagtttgggagttttattttgaggggtgttctctg-gggtgagtagtgacgatggg |
2826020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 19673259 - 19673332
Alignment:
| Q |
72 |
atgtggctcagcttgggtgttggggtctgggagttttattttgagg-gtgttctttgtaggtgagtagtgacga |
144 |
Q |
| |
|
|||||||| | ||| ||||||| || ||| |||||| ||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
19673259 |
atgtggctaaactttggtgttgaggactgagagtttaattttgaggagtgttctttgggggtgagtagtgacga |
19673332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 36689643 - 36689586
Alignment:
| Q |
152 |
tggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||| ||| ||||||||||| ||||||||||| ||||| |||||||| ||||||||| |
|
|
| T |
36689643 |
tggttgataccgtgtttacaaggcttgtttttttggagtatgttttagatggtgatgt |
36689586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0343 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0343
Description:
Target: scaffold0343; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 5813 - 6004
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||||| ||||||||| ||||||| || ||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
5813 |
ggaggtcgcaaggtttgtgatagctacttgatccttcggttaggtgctcttcgtaatgtggctcagcttgggtgttgggatctgggagttttattttgag |
5912 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||| ||||| |||||||||||| |||||| | |||||||| || ||||||| ||||||||||||| | ||| | |||||||||||||||| |
|
|
| T |
5913 |
ggtgttttttgtgggtgagtagtgatgatgggaggtggtggataccatgtttacggtgcttgtttttttgaagtct-ttttaggtggtgatgt |
6004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0068
Description:
Target: scaffold0068; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 35746 - 35558
Alignment:
| Q |
17 |
ggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgag |
116 |
Q |
| |
|
||||||| |||| |||||| ||||| |||| ||| ||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||| |||| || |
|
|
| T |
35746 |
ggaggtcacgagatttgtgatagctgcatgatccatcggttaggtgctcttcgaaatgaggctcagcttgggtgttggggtgtgggagttt--tttttag |
35649 |
T |
|
| Q |
117 |
ggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
|||||||| | |||||||| |||||||||||| |||||||| | |||||||||||||||||||||| ||||| ||||||||||| |||||| |
|
|
| T |
35648 |
agtgttcttagcaggtgagt-gtgacgatgggcagtggtggatactgtgtttacagtgcttgtttttt-ggagtctgttttaggtgatgatgt |
35558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0434 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0434
Description:
Target: scaffold0434; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 2497 - 2454
Alignment:
| Q |
166 |
tttacagtgcttgttttttgggagtttgttttaggtggtgatgt |
209 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
2497 |
tttacggtgcttgtttttttggagtttgttttaggtggtgatgt |
2454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0085
Description:
Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 48560 - 48609
Alignment:
| Q |
135 |
gtagtgacgatgggcgatggtggatgccgtgtttacagtgcttgtttttt |
184 |
Q |
| |
|
||||||||||||||| |||||| || ||||||| |||||||||||||||| |
|
|
| T |
48560 |
gtagtgacgatgggctatggtgaataccgtgttaacagtgcttgtttttt |
48609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0172 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0172
Description:
Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 19113 - 19177
Alignment:
| Q |
106 |
tttattttgagggtgttctttgtaggtgagtagtgacgatgggcgatggtggatgccgtgtttacagt |
173 |
Q |
| |
|
|||||||||||||||||| |||| |||||||||| |||| ||| |||| ||| ||||||||||||| |
|
|
| T |
19113 |
tttattttgagggtgttcattgtgggtgagtagt---gatgagcggtggtagataccgtgtttacagt |
19177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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