View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9370_low_37 (Length: 272)
Name: NF9370_low_37
Description: NF9370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9370_low_37 |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 37165805 - 37165542
Alignment:
| Q |
1 |
agttcatttgttcatgcgttgtgcaaataaaagtttagttgagtg-----ataaagaataaaataagtttcatgagtcaaaaagaattaaaagatttatt |
95 |
Q |
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| T |
37165805 |
agttcatttgctcatgcgttgtgcaaataaaagtttagttgagttgagtaataaagaataaaataagtttcatgagtcaaaaagaattaaaagatttatt |
37165706 |
T |
|
| Q |
96 |
taaatccactttagtcaccatattttccttgaagtaggactttagccgccttattttaaaatgtgtttttgtttgcaactttcacactattgcaattttc |
195 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37165705 |
taaatccactttagtcaccatattttacttgaagtaggactttagccgccttattttaaaatgtgtttttgtttgcaactttcacactattgcaattttc |
37165606 |
T |
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| Q |
196 |
atcctaattcagattttggacctccaaaatggtagttttagcgctaaaaaacaagtaatttttg |
259 |
Q |
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|||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
37165605 |
atccgaattcagattttggacctccaaaatggtagttttagggctaaaaaacaagtaatttttg |
37165542 |
T |
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