View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9370_low_7 (Length: 460)

Name: NF9370_low_7
Description: NF9370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9370_low_7
NF9370_low_7
[»] chr5 (41 HSPs)
chr5 (251-460)||(1759786-1759994)
chr5 (1-173)||(1759536-1759708)
chr5 (282-395)||(35653252-35653364)
chr5 (279-384)||(43414072-43414176)
chr5 (282-395)||(25017288-25017400)
chr5 (282-390)||(5151489-5151596)
chr5 (284-391)||(16315535-16315639)
chr5 (282-395)||(39567903-39568015)
chr5 (279-391)||(4421965-4422076)
chr5 (282-394)||(8410142-8410253)
chr5 (282-388)||(12068178-12068283)
chr5 (286-387)||(34546782-34546882)
chr5 (302-389)||(27823279-27823365)
chr5 (283-388)||(3639079-3639182)
chr5 (282-395)||(28143120-28143232)
chr5 (286-395)||(35945250-35945358)
chr5 (291-395)||(1479133-1479236)
chr5 (282-370)||(13951258-13951345)
chr5 (282-395)||(338761-338873)
chr5 (282-395)||(4962514-4962625)
chr5 (279-380)||(25568304-25568404)
chr5 (327-395)||(15915876-15915944)
chr5 (287-395)||(37243852-37243958)
chr5 (283-388)||(10017626-10017727)
chr5 (283-369)||(12914176-12914261)
chr5 (286-371)||(6823773-6823858)
chr5 (283-390)||(27535098-27535202)
chr5 (279-363)||(39693007-39693090)
chr5 (279-369)||(10406785-10406873)
chr5 (279-325)||(4838278-4838324)
chr5 (283-364)||(16899599-16899680)
chr5 (297-375)||(3015067-3015144)
chr5 (283-328)||(39335474-39335519)
chr5 (286-369)||(28599677-28599759)
chr5 (298-377)||(39042050-39042128)
chr5 (314-395)||(40099363-40099443)
chr5 (345-395)||(104926-104976)
chr5 (297-390)||(17168691-17168783)
chr5 (297-370)||(39069298-39069370)
chr5 (338-375)||(39167650-39167687)
chr5 (297-389)||(678465-678556)
[»] chr4 (48 HSPs)
chr4 (282-395)||(35808393-35808505)
chr4 (282-395)||(55669739-55669851)
chr4 (283-395)||(2362630-2362743)
chr4 (286-395)||(26040357-26040465)
chr4 (279-388)||(32131139-32131247)
chr4 (283-388)||(34016626-34016730)
chr4 (282-395)||(41956210-41956322)
chr4 (279-395)||(10100110-10100225)
chr4 (282-394)||(23765578-23765689)
chr4 (282-388)||(51266924-51267029)
chr4 (282-395)||(27839303-27839415)
chr4 (282-395)||(34316719-34316832)
chr4 (282-395)||(45688743-45688855)
chr4 (282-394)||(31754938-31755049)
chr4 (279-387)||(33951697-33951804)
chr4 (283-387)||(30475426-30475529)
chr4 (282-395)||(26831783-26831894)
chr4 (282-382)||(20811263-20811362)
chr4 (283-395)||(31168135-31168246)
chr4 (282-370)||(19328950-19329037)
chr4 (282-388)||(50514618-50514722)
chr4 (282-362)||(47188695-47188774)
chr4 (290-394)||(54339121-54339223)
chr4 (327-389)||(19876186-19876248)
chr4 (283-376)||(52341602-52341694)
chr4 (283-395)||(35675187-35675298)
chr4 (283-391)||(29462802-29462909)
chr4 (282-394)||(40436081-40436192)
chr4 (327-395)||(51290474-51290542)
chr4 (282-394)||(53566948-53567062)
chr4 (328-394)||(46695960-46696026)
chr4 (284-389)||(13498120-13498224)
chr4 (327-394)||(9693380-9693446)
chr4 (304-395)||(31487743-31487833)
chr4 (307-388)||(35511184-35511264)
chr4 (285-376)||(3769816-3769906)
chr4 (283-364)||(45088071-45088148)
chr4 (282-328)||(9693534-9693580)
chr4 (287-391)||(30617954-30618057)
chr4 (307-375)||(52895749-52895816)
chr4 (283-366)||(15986267-15986349)
chr4 (345-395)||(16559991-16560041)
chr4 (282-384)||(20456569-20456670)
chr4 (286-372)||(35927294-35927379)
chr4 (297-375)||(36486703-36486780)
chr4 (297-375)||(55120106-55120183)
chr4 (362-391)||(19328748-19328777)
chr4 (287-388)||(48513624-48513724)
[»] chr1 (47 HSPs)
chr1 (282-395)||(34874567-34874679)
chr1 (282-395)||(932151-932263)
chr1 (282-395)||(22346231-22346343)
chr1 (282-395)||(41147472-41147584)
chr1 (282-387)||(42607326-42607430)
chr1 (283-395)||(27209715-27209826)
chr1 (290-389)||(11385810-11385908)
chr1 (282-395)||(49508728-49508839)
chr1 (279-387)||(6170553-6170660)
chr1 (283-395)||(43433776-43433887)
chr1 (282-394)||(49901926-49902037)
chr1 (286-394)||(50295428-50295535)
chr1 (282-388)||(47655372-47655477)
chr1 (282-395)||(11385981-11386093)
chr1 (282-395)||(29966822-29966935)
chr1 (282-387)||(33929966-33930070)
chr1 (279-395)||(2125701-2125816)
chr1 (282-394)||(24140773-24140883)
chr1 (282-389)||(4940740-4940846)
chr1 (289-395)||(32213883-32213988)
chr1 (284-388)||(40845253-40845356)
chr1 (282-390)||(52396443-52396549)
chr1 (282-395)||(7190469-7190581)
chr1 (286-395)||(28850904-28851011)
chr1 (283-387)||(26469584-26469687)
chr1 (279-387)||(28277484-28277591)
chr1 (279-375)||(50154470-50154565)
chr1 (279-395)||(44286869-44286984)
chr1 (303-395)||(45721773-45721864)
chr1 (279-362)||(47895331-47895413)
chr1 (286-388)||(4656020-4656121)
chr1 (309-395)||(5945447-5945532)
chr1 (297-395)||(14331852-14331949)
chr1 (297-395)||(16691309-16691406)
chr1 (297-391)||(17402963-17403056)
chr1 (279-387)||(31975484-31975591)
chr1 (297-375)||(48938651-48938727)
chr1 (345-395)||(8244150-8244200)
chr1 (297-391)||(43168156-43168249)
chr1 (286-359)||(30222624-30222697)
chr1 (297-395)||(44359666-44359763)
chr1 (286-388)||(40920189-40920292)
chr1 (285-390)||(41492912-41493015)
chr1 (297-370)||(41898878-41898950)
chr1 (307-375)||(8892785-8892852)
chr1 (307-381)||(27210750-27210823)
chr1 (355-389)||(30222991-30223025)
[»] chr2 (38 HSPs)
chr2 (282-393)||(6999202-6999312)
chr2 (283-395)||(765147-765258)
chr2 (286-388)||(2966544-2966645)
chr2 (282-391)||(862589-862697)
chr2 (282-395)||(39401532-39401643)
chr2 (279-395)||(16361563-16361678)
chr2 (282-395)||(17603811-17603923)
chr2 (282-395)||(33726380-33726492)
chr2 (282-395)||(39085789-39085901)
chr2 (282-387)||(41436478-41436582)
chr2 (283-395)||(27495124-27495235)
chr2 (279-388)||(17118377-17118484)
chr2 (282-395)||(1321168-1321280)
chr2 (282-391)||(35445291-35445400)
chr2 (279-388)||(9201499-9201606)
chr2 (286-391)||(17095068-17095171)
chr2 (279-388)||(33864352-33864460)
chr2 (283-375)||(44173120-44173211)
chr2 (290-394)||(44299679-44299782)
chr2 (273-383)||(13997913-13998022)
chr2 (286-391)||(17056059-17056162)
chr2 (286-391)||(17068506-17068609)
chr2 (279-383)||(464792-464896)
chr2 (286-391)||(17074489-17074592)
chr2 (279-356)||(23685688-23685764)
chr2 (279-328)||(11445382-11445431)
chr2 (282-386)||(34334167-34334270)
chr2 (286-388)||(2239586-2239687)
chr2 (295-387)||(43140328-43140419)
chr2 (282-343)||(15004927-15004987)
chr2 (327-370)||(11445313-11445356)
chr2 (297-388)||(34220650-34220740)
chr2 (283-388)||(2805382-2805488)
chr2 (297-395)||(11659277-11659374)
chr2 (342-395)||(12695233-12695286)
chr2 (327-391)||(1729528-1729592)
chr2 (338-374)||(34316342-34316378)
chr2 (330-374)||(37230267-37230311)
[»] chr7 (38 HSPs)
chr7 (282-395)||(43567503-43567615)
chr7 (282-395)||(29034687-29034799)
chr7 (282-395)||(5240329-5240441)
chr7 (286-395)||(40763253-40763361)
chr7 (279-388)||(42222218-42222326)
chr7 (283-395)||(8380442-8380553)
chr7 (279-388)||(43958087-43958195)
chr7 (282-394)||(8292745-8292856)
chr7 (283-391)||(27053494-27053601)
chr7 (282-387)||(7322958-7323062)
chr7 (282-391)||(22521586-22521694)
chr7 (282-387)||(24359713-24359817)
chr7 (282-394)||(22707049-22707159)
chr7 (279-394)||(49069552-49069666)
chr7 (279-395)||(30538477-30538589)
chr7 (283-393)||(41188785-41188894)
chr7 (286-394)||(40066915-40067021)
chr7 (287-386)||(3681699-3681797)
chr7 (282-391)||(1910244-1910351)
chr7 (306-395)||(48454819-48454907)
chr7 (282-377)||(40194826-40194920)
chr7 (302-395)||(36279139-36279231)
chr7 (279-388)||(46478560-46478667)
chr7 (283-395)||(8258640-8258746)
chr7 (282-391)||(5347973-5348078)
chr7 (283-374)||(46042749-46042838)
chr7 (285-382)||(31626051-31626147)
chr7 (286-372)||(42291284-42291371)
chr7 (282-354)||(29687476-29687547)
chr7 (283-388)||(1907593-1907697)
chr7 (291-359)||(30388693-30388760)
chr7 (327-375)||(31360309-31360357)
chr7 (285-355)||(6548533-6548602)
chr7 (283-312)||(29959068-29959097)
chr7 (286-371)||(32204186-32204270)
chr7 (327-372)||(37869384-37869429)
chr7 (283-375)||(42552489-42552579)
chr7 (307-375)||(3720131-3720198)
[»] chr3 (37 HSPs)
chr3 (282-390)||(36730155-36730262)
chr3 (279-394)||(4759848-4759962)
chr3 (282-391)||(8715503-8715610)
chr3 (282-391)||(9067390-9067497)
chr3 (283-395)||(29915572-29915683)
chr3 (283-395)||(29964725-29964836)
chr3 (279-388)||(46317483-46317591)
chr3 (279-395)||(32415566-32415681)
chr3 (279-394)||(44695669-44695783)
chr3 (279-394)||(37509108-37509222)
chr3 (282-383)||(12905292-12905391)
chr3 (282-395)||(44570383-44570495)
chr3 (282-395)||(10854859-10854975)
chr3 (283-373)||(52570783-52570872)
chr3 (282-387)||(35306332-35306436)
chr3 (282-391)||(51817313-51817421)
chr3 (282-395)||(8847449-8847561)
chr3 (282-387)||(12051038-12051142)
chr3 (286-395)||(25102319-25102426)
chr3 (327-395)||(1803932-1804000)
chr3 (283-395)||(45899540-45899652)
chr3 (279-367)||(20227405-20227492)
chr3 (290-391)||(18788-18888)
chr3 (282-343)||(31647304-31647364)
chr3 (284-372)||(34060786-34060873)
chr3 (355-395)||(41346346-41346386)
chr3 (339-395)||(48136720-48136776)
chr3 (284-358)||(41345977-41346050)
chr3 (289-377)||(11675320-11675405)
chr3 (310-381)||(39436493-39436563)
chr3 (290-374)||(18946-19029)
chr3 (300-376)||(49976157-49976232)
chr3 (286-365)||(11316970-11317048)
chr3 (297-394)||(12060057-12060153)
chr3 (340-405)||(44019107-44019172)
chr3 (297-394)||(48313836-48313932)
chr3 (287-371)||(21324521-21324603)
[»] chr8 (33 HSPs)
chr8 (282-395)||(19389307-19389419)
chr8 (282-394)||(21016234-21016345)
chr8 (282-388)||(25249345-25249450)
chr8 (283-383)||(18068963-18069062)
chr8 (283-391)||(45338005-45338112)
chr8 (279-393)||(6939155-6939268)
chr8 (286-388)||(8018765-8018866)
chr8 (282-389)||(4989936-4990039)
chr8 (282-386)||(21016063-21016166)
chr8 (282-382)||(26195383-26195482)
chr8 (291-387)||(26672799-26672894)
chr8 (286-387)||(10694811-10694911)
chr8 (282-391)||(3174456-3174568)
chr8 (282-387)||(34713924-34714030)
chr8 (282-382)||(14855394-14855493)
chr8 (283-387)||(37433267-37433369)
chr8 (302-389)||(5129459-5129545)
chr8 (327-391)||(7532829-7532893)
chr8 (300-375)||(31596438-31596512)
chr8 (295-381)||(26892799-26892884)
chr8 (327-389)||(44874369-44874431)
chr8 (314-395)||(35930168-35930248)
chr8 (286-374)||(6433548-6433635)
chr8 (279-343)||(33741523-33741586)
chr8 (300-388)||(25636694-25636780)
chr8 (297-371)||(25690855-25690929)
chr8 (297-390)||(11332796-11332888)
chr8 (338-394)||(19976488-19976545)
chr8 (297-375)||(34421335-34421412)
chr8 (283-328)||(30351592-30351637)
chr8 (333-381)||(6841707-6841755)
chr8 (283-367)||(39972177-39972260)
chr8 (291-319)||(41689098-41689126)
[»] chr6 (21 HSPs)
chr6 (282-394)||(6866915-6867026)
chr6 (282-394)||(12191493-12191604)
chr6 (293-395)||(10855443-10855544)
chr6 (282-395)||(5578274-5578386)
chr6 (282-372)||(7875201-7875290)
chr6 (305-395)||(29692338-29692427)
chr6 (279-395)||(8324101-8324216)
chr6 (282-395)||(26572079-26572186)
chr6 (282-390)||(16437592-16437691)
chr6 (279-394)||(7274212-7274326)
chr6 (285-391)||(28014638-28014743)
chr6 (282-372)||(7880447-7880536)
chr6 (282-326)||(32786069-32786113)
chr6 (297-375)||(27127524-27127601)
chr6 (283-376)||(12175561-12175652)
chr6 (327-395)||(32786260-32786327)
chr6 (283-394)||(31220325-31220435)
chr6 (333-373)||(12769254-12769294)
chr6 (300-375)||(20775010-20775084)
chr6 (306-387)||(22414598-22414676)
chr6 (306-374)||(12402842-12402909)
[»] scaffold0062 (3 HSPs)
scaffold0062 (282-391)||(16773-16880)
scaffold0062 (282-391)||(26941-27048)
scaffold0062 (282-391)||(37107-37214)
[»] scaffold0002 (1 HSPs)
scaffold0002 (282-362)||(392162-392241)
[»] scaffold0809 (2 HSPs)
scaffold0809 (327-394)||(4268-4335)
scaffold0809 (282-328)||(4709-4755)
[»] scaffold0144 (1 HSPs)
scaffold0144 (309-375)||(39614-39679)
[»] scaffold0050 (2 HSPs)
scaffold0050 (340-388)||(37393-37441)
scaffold0050 (287-343)||(37428-37483)


Alignment Details
Target: chr5 (Bit Score: 158; Significance: 7e-84; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 251 - 460
Target Start/End: Original strand, 1759786 - 1759994
Alignment:
Q  251 agtcacactattttgttaagggtcttgctaacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccatttt 350  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||||| |||||||||||||||||||||||| |||| ||||||| ||||| |||||||    
T  1759786 agtcacactattttgttaagtgtcttgctaacacatttgcattggttttaacaacattttgacttttaaaaagttaaa-tttatcacttttctccatttt 1759884  T
Q  351 ccaatactatatttctatttttatccccttatccaatgccccaagcattcaccttttgttaaatataaagaagaaaacagaagcaacagagagcggaaga 450  Q
     ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1759885 tcaatactatatttctatttttatcctcttatccaatgccccaagcattctccttttgttaaatataaagaagaaaacaaaagcaacagagagcggaaga 1759984  T
Q  451 ggaagagagt 460  Q
    ||||||||||    
T  1759985 ggaagagagt 1759994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 1759536 - 1759708
Alignment:
Q  1 atttctataattcttctctgattatctagcattgcagaatgaccaaaattttcatctttaataagagcccttctaggactgcagggtcattttcagactt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1759536 atttctataattcttctctgattatctagcattgcagaatgaccaaaattttcatctttaataagagcccttctaggactgcagggtcattttcagactt 1759635  T
Q  101 aatcccatacttcaaacttcnnnnnnnattacaccaaccgataatataagttgaattttaaaacacacaattg 173  Q
    || |||||||||||||||||       ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  1759636 aagcccatacttcaaacttctttttttattacaccaactgataatataagttaaattttaaaacacacaattg 1759708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 35653364 - 35653252
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||||||||||| ||| |||||| |||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  35653364 catgtttgcattggtttcaacaacattttgattttcaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttctatttttatcccctta 35653266  T
Q  382 tccaatgccccaag 395  Q
    |||||||| |||||    
T  35653265 tccaatgcaccaag 35653252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 279 - 384
Target Start/End: Complemental strand, 43414176 - 43414072
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||||    
T  43414176 taacatgtttgcattggtttcaacaacattttgatttttaaaaagttaaa-ttgatcatttttcaccattttccaatgctatatttctatttttatcccc 43414078  T
Q  379 ttatcc 384  Q
    ||||||    
T  43414077 ttatcc 43414072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 25017400 - 25017288
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||| |||||||||||| | |||||||||||||||||| |||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  25017400 catgtttgtattggtttcaacgatattttgacttttaaaaagttaaa-tttatcacttttcacaattttccaatactatatttctatttttatcccctta 25017302  T
Q  382 tccaatgccccaag 395  Q
    ||||||||| ||||    
T  25017301 tccaatgcctcaag 25017288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 282 - 390
Target Start/End: Original strand, 5151489 - 5151596
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||  ||||||||||||||||||||||||    
T  5151489 catgtttgcattagtttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcatcattttccaatgttatatttctatttttatcccctta 5151587  T
Q  382 tccaatgcc 390  Q
    || ||||||    
T  5151588 tcaaatgcc 5151596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 284 - 391
Target Start/End: Complemental strand, 16315639 - 16315535
Alignment:
Q  284 tgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatc 383  Q
    ||||||||||||||||||||||||||||||| |||||||| ||   ||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  16315639 tgtttgcattggtttcaacaacattttgactattaaaaagtta---tttatcacttttcaccattttccaatgctatatttctatttttatccccttatc 16315543  T
Q  384 caatgccc 391  Q
    | ||||||    
T  16315542 cgatgccc 16315535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 282 - 395
Target Start/End: Original strand, 39567903 - 39568015
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||||||||||  |||||| |||||||||| |||| |||||||||||||| ||||||||||| |||||||| |||||||||||| |||    
T  39567903 catgtttgcattggtttcaacaatgttttgatttttaaaaagttaaa-tttatcatttttcatcattttccaatgctatatttatatttttatcccatta 39568001  T
Q  382 tccaatgccccaag 395  Q
    ||||||||||||||    
T  39568002 tccaatgccccaag 39568015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 279 - 391
Target Start/End: Complemental strand, 4422076 - 4421965
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||||||||||||  |||||||||||||||| || ||||||| |||| ||||||| |||||||||||||||||| |||||||||||||||||||| |    
T  4422076 taacatgtttgcattgacttcaacaacattttgatttgtaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttctatttttatcctc 4421978  T
Q  379 ttatccaatgccc 391  Q
    |||||||||||||    
T  4421977 ttatccaatgccc 4421965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 8410142 - 8410253
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||| |||||||| || ||||||||||||||||||||| |||| |||||||||||| ||||||||| |||||||||||| ||||||||||||||||    
T  8410142 catgtttgtattggttttaataacattttgacttttaaaaagttaaa-tttatcattttttaccattttctaatactatatttttatttttatcccctta 8410240  T
Q  382 tccaatgccccaa 394  Q
    || ||| ||||||    
T  8410241 tctaataccccaa 8410253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 282 - 388
Target Start/End: Complemental strand, 12068283 - 12068178
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||| |||||| |||| ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||  ||| |    
T  12068283 catgtttgtattggtgtcaataacattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttctatttttatatcctca 12068185  T
Q  382 tccaatg 388  Q
    |||||||    
T  12068184 tccaatg 12068178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 286 - 387
Target Start/End: Original strand, 34546782 - 34546882
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 385  Q
    |||||||| |||||||||||||||| ||||||||||| || |||||||||| ||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  34546782 tttgcattagtttcaacaacattttaacttttaaaaa-attaaatttatcacttttcaccatttttcaatgttatatttctatttttatccccttatcca 34546880  T
Q  386 at 387  Q
    ||    
T  34546881 at 34546882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 302 - 389
Target Start/End: Original strand, 27823279 - 27823365
Alignment:
Q  302 caacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 389  Q
    ||||||||| | |||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27823279 caacattttaatttttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttctatttttatccccttatccaatgc 27823365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 388
Target Start/End: Complemental strand, 3639182 - 3639079
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||||||||||||||||||| |||| |||||||||||| || |||||||||| | ||||||||||||||||  |||||||||||||||||||||||||    
T  3639182 atgtttgcattggtttcaacaatattt-gacttttaaaaa-attaaatttatcactcttcaccattttccaatgttatatttctatttttatccccttat 3639085  T
Q  383 ccaatg 388  Q
     |||||    
T  3639084 tcaatg 3639079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 28143232 - 28143120
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||| ||| |||||||||||||||||| |||||||||| |||| ||||| |||||||||||||| |||||  |||||||||||||||||| |||||    
T  28143232 catgtttgtattagtttcaacaacattttgatttttaaaaagttaaa-tttattatttttcaccatttcccaatgttatatttctatttttatctcctta 28143134  T
Q  382 tccaatgccccaag 395  Q
    | ||||| ||||||    
T  28143133 ttcaatgtcccaag 28143120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 35945250 - 35945358
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 385  Q
    |||||||| |||||||||||||||| || ||||||||| |||| ||||||| ||||||| ||||||||||  ||||||||||||||||| ||||||||||    
T  35945250 tttgcattagtttcaacaacattttaacatttaaaaagttaaa-tttatcacttttcactattttccaatgttatatttctatttttattcccttatcca 35945348  T
Q  386 atgccccaag 395  Q
    || |||||||    
T  35945349 ataccccaag 35945358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 291 - 395
Target Start/End: Complemental strand, 1479236 - 1479133
Alignment:
Q  291 attggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgcc 390  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||| ||||||  ||||| |||| |||||||||||||||||||||||||| |||||||    
T  1479236 attggtttcaataacattttgacttttaaaaagttaaa-tttatcacttttcattatttttcaatgctatatttctatttttatccccttattcaatgcc 1479138  T
Q  391 ccaag 395  Q
     ||||    
T  1479137 tcaag 1479133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 282 - 370
Target Start/End: Complemental strand, 13951345 - 13951258
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattt 370  Q
    |||| |||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||| |||| ||||||||||||||    
T  13951345 catgcttgcattggtttcaacaacattttgacttttaaaaaaat-aaatttatcacttttcaccatttttcaatgctatatttctattt 13951258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 338873 - 338761
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||| |||||||||| ||||||| |||||||||| |||| ||||||| |||| | |||||| |||||  |||||| |||||||||||| |||    
T  338873 catgtttgcatttgtttcaacaatattttgatttttaaaaagttaaa-tttatcactttttatcatttttcaatatcatatttttatttttatcccttta 338775  T
Q  382 tccaatgccccaag 395  Q
    ||||||||||||||    
T  338774 tccaatgccccaag 338761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 4962625 - 4962514
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||| ||| |||||||||||||||||||||| |||||| |||| ||||||| |||||| |||||||||||  |||||||||||||||||  |||||    
T  4962625 catgtttgtattagtttcaacaacattttgactttaaaaaagttaaa-tttatcacttttcatcattttccaatgttatatttctatttttat-tcctta 4962528  T
Q  382 tccaatgccccaag 395  Q
    ||||||| ||||||    
T  4962527 tccaatgtcccaag 4962514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 279 - 380
Target Start/End: Complemental strand, 25568404 - 25568304
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||||||||||||||||||| |||||||||| |||||||||| | |||| ||||| |||||| |||||| |||| |||||||| |||||||||||||    
T  25568404 taacatgtttgcattggtttcaataacattttgatttttaaaaag-ttaaatgtatcacttttcatcatttttcaatgctatatttatatttttatcccc 25568306  T
Q  379 tt 380  Q
    ||    
T  25568305 tt 25568304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 327 - 395
Target Start/End: Original strand, 15915876 - 15915944
Alignment:
Q  327 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  15915876 aaatttatcacttttcaccattttccaatgctatatttctatttttattcccttatccaatgccccaag 15915944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 37243852 - 37243958
Alignment:
Q  287 ttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaa 386  Q
    |||||||| ||||||||||||||| | |||||||||| |||| ||||||| ||||||||||||||||||| ||||||| ||||||||| || ||||||||    
T  37243852 ttgcattgatttcaacaacattttaatttttaaaaagttaaa-tttatcacttttcaccattttccaatattatatttttatttttat-cctttatccaa 37243949  T
Q  387 tgccccaag 395  Q
    |||| ||||    
T  37243950 tgcctcaag 37243958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 283 - 388
Target Start/End: Complemental strand, 10017727 - 10017626
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||||||||||||| ||||||||||| |||||||||||| |   |||||||| ||||||||| |||||| |||||||||||||||||||||| |||||    
T  10017727 atgtttgcattggttttaacaacattttaacttttaaaaagtt---atttatcaattttcacca-tttccagtactatatttctatttttatcctcttat 10017632  T
Q  383 ccaatg 388  Q
    | ||||    
T  10017631 caaatg 10017626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 369
Target Start/End: Original strand, 12914176 - 12914261
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatt 369  Q
    |||||||||||||||||||||| ||||||| ||||||||| || |||||||||| ||||||||||||| |||| |||||||||||||    
T  12914176 atgtttgcattggtttcaacaatattttgatttttaaaaa-attaaatttatcacttttcaccatttttcaatgctatatttctatt 12914261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 286 - 371
Target Start/End: Complemental strand, 6823858 - 6823773
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttt 371  Q
    |||||||||| |||||||| ||||| |||||||||||| |||||||||| | ||| |||| |||||| |||| |||||||||||||    
T  6823858 tttgcattggattcaacaatattttaacttttaaaaagttaaaatttattactttccaccgttttccgatacaatatttctatttt 6823773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 283 - 390
Target Start/End: Original strand, 27535098 - 27535202
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    ||||||||||||| |||||||   |||| |||||||||||  ||||||| |||| ||||||||||||| |||||| |||||| |||||||||||  ||||    
T  27535098 atgtttgcattggattcaaca---ttttaacttttaaaaacttaaaattcatcacttttcaccatttttcaatacaatatttatatttttatccttttat 27535194  T
Q  383 ccaatgcc 390  Q
     |||||||    
T  27535195 tcaatgcc 27535202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 363
Target Start/End: Original strand, 39693007 - 39693090
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatt 363  Q
    ||||||||||| |||| ||||||||| ||||| |||||||||||||| ||||||||||||||| |||| ||| |||| |||||||    
T  39693007 taacatgtttgtattgatttcaacaatattttaacttttaaaaagat-aaatttatcattttttaccacttttcaatgctatatt 39693090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 369
Target Start/End: Original strand, 10406785 - 10406873
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatt 369  Q
    |||||| |||||||||| |||||||| ||||||| ||| |||||  | |||||||||| ||||| ||||||| |||||| |||||||||||    
T  10406785 taacatttttgcattggattcaacaatattttgaatttaaaaaa--ttaaatttatcacttttctccatttttcaatacaatatttctatt 10406873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 325
Target Start/End: Original strand, 4838278 - 4838324
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagat 325  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  4838278 taacatgtttgcattagtttcaacaatattttgacttttaaaaagat 4838324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 364
Target Start/End: Complemental strand, 16899680 - 16899599
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatattt 364  Q
    ||||||| ||||| ||||||||||||||||||||||||||| ||||||| || | |||||| | ||| |||| || ||||||    
T  16899680 atgtttgtattggattcaacaacattttgacttttaaaaagttaaaattcattacttttcatcctttcccaacacaatattt 16899599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 375
Target Start/End: Complemental strand, 3015144 - 3015067
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 375  Q
    |||||||| ||||| |||||||||||| |||| || |||||||| ||| |||||| || || |||||||||||||||||    
T  3015144 ttcaacaatattttaacttttaaaaagttaaa-ttaatcattttacactattttctaacacaatatttctatttttatc 3015067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 283 - 328
Target Start/End: Original strand, 39335474 - 39335519
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaa 328  Q
    ||||||| ||||| ||||||||||||||||||||||||||| ||||    
T  39335474 atgtttgtattggattcaacaacattttgacttttaaaaagttaaa 39335519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 369
Target Start/End: Complemental strand, 28599759 - 28599677
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatt 369  Q
    |||||||||  ||||| ||  |||| |||||||||||| | |||||||||||||||||| |||||||||||  |||||| ||||    
T  28599759 tttgcattgaattcaataaatttttaacttttaaaaag-tcaaatttatcatttttcactattttccaatataatatttttatt 28599677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 377
Target Start/End: Complemental strand, 39042128 - 39042050
Alignment:
Q  298 tcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccc 377  Q
    ||||||||||||| ||||||||||| || ||||| | |||||||||  ||||| ||||  ||||||| ||||||||||||    
T  39042128 tcaacaacattttaacttttaaaaa-attaaattaaccatttttcattattttacaatgttatatttttatttttatccc 39042050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 395
Target Start/End: Original strand, 40099363 - 40099443
Alignment:
Q  314 ttttaaaaagataaaatttatcatttttcacca-ttttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    |||| ||||| | |||||||||| ||||||||| |||| |||| |||||||| ||||||  ||||||||||||||||| ||||    
T  40099363 tttttaaaaggttaaatttatcacttttcaccattttttcaatgctatatttttatttt--tccccttatccaatgccacaag 40099443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 395
Target Start/End: Complemental strand, 104976 - 104926
Alignment:
Q  345 cattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    ||||||| |||| ||||||||||||||||  |||||||||||| |||||||    
T  104976 cattttctaatattatatttctatttttactcccttatccaataccccaag 104926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 390
Target Start/End: Original strand, 17168691 - 17168783
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgcc 390  Q
    |||| ||| ||||| | |||||||||| | ||||| ||||||||||||| |||| |||| | |||||||||||| ||||  |||| ||||||||    
T  17168691 ttcagcaatattttaaattttaaaaag-tcaaattcatcatttttcaccgtttttcaatgcaatatttctatttgtatcttcttaaccaatgcc 17168783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 370
Target Start/End: Complemental strand, 39069370 - 39069298
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattt 370  Q
    |||||||| |||||||||||||||| | | ||||| |||| ||||||| |||||||||||| || || ||||||    
T  39069370 ttcaacaatattttgacttttaaaatg-ttaaattcatcacttttcacaattttccaatacaatgttcctattt 39069298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 375
Target Start/End: Original strand, 39167650 - 39167687
Alignment:
Q  338 ttttcaccattttccaatactatatttctatttttatc 375  Q
    |||||||||||||||||||| || ||||||||||||||    
T  39167650 ttttcaccattttccaatacaatgtttctatttttatc 39167687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 678465 - 678556
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 389  Q
    ||||||||  |||| |||||||||| | |||| || || | |||||||||||||||||||| | | |||||||||| ||| |||| |||||||    
T  678465 ttcaacaattttttaacttttaaaaggttaaa-ttcattacttttcaccattttccaatacaacaattctatttttgtcctcttaaccaatgc 678556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 1e-45; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 35808505 - 35808393
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  35808505 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcacaattttccaatgctatatttctatttttatcccctta 35808407  T
Q  382 tccaatgccccaag 395  Q
    ||||||||||||||    
T  35808406 tccaatgccccaag 35808393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 282 - 395
Target Start/End: Original strand, 55669739 - 55669851
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  55669739 catgtttgcattgtttttaacaacattttgacttttaaaaagttaaa-tttatcatttttcaccattttccaatgctatatttctatttttatcccctta 55669837  T
Q  382 tccaatgccccaag 395  Q
    ||||||||||||||    
T  55669838 tccaatgccccaag 55669851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 283 - 395
Target Start/End: Original strand, 2362630 - 2362743
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaaga-taaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||| ||||||||||||||||||||||| | | |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  2362630 atgtttgcattggttttaacaacattttgacttttaaaaaaaattaaatttatcacttttcaccattttccaatactatatttttatttttatcccctta 2362729  T
Q  382 tccaatgccccaag 395  Q
    ||| ||||||||||    
T  2362730 tccgatgccccaag 2362743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 26040465 - 26040357
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 385  Q
    |||||||||| |||||||| |||||||||||||||||| |||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26040465 tttgcattggcttcaacaatattttgacttttaaaaagttaaactt-atcacttttcaccattttccaatactatatttctatttttatccccttatcca 26040367  T
Q  386 atgccccaag 395  Q
    ||||||||||    
T  26040366 atgccccaag 26040357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 279 - 388
Target Start/End: Original strand, 32131139 - 32131247
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| || ||||||||||||||||||||||||||||||||||| |     
T  32131139 taacatgtttgcattggtttcaacaacatcttgacttttaaaaagttaaa-tttatcacttatcaccattttccaatactatatttctatttttatctct 32131237  T
Q  379 ttatccaatg 388  Q
    ||||||||||    
T  32131238 ttatccaatg 32131247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 283 - 388
Target Start/End: Original strand, 34016626 - 34016730
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||||||||| |||||||||||||||||||||||||||| |||| || |||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  34016626 atgtttgcattgatttcaacaacattttgacttttaaaaagttaaa-ttcatcacttttcaccattttccaatgctatatttctatttttatccccttat 34016724  T
Q  383 ccaatg 388  Q
    ||||||    
T  34016725 ccaatg 34016730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 41956322 - 41956210
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||  ||||||||||||||||||| ||||    
T  41956322 catgtttgcattggcttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcatcattttccaatgttatatttctatttttatcctctta 41956224  T
Q  382 tccaatgccccaag 395  Q
    ||| ||||||||||    
T  41956223 tccgatgccccaag 41956210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 279 - 395
Target Start/End: Complemental strand, 10100225 - 10100110
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| | |||||||||||||| |||| ||||||| |||||||||||||    
T  10100225 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttataacttttcaccattttctaatattatatttatatttttatcccc 10100127  T
Q  379 ttatccaatgccccaag 395  Q
    |||||| ||| ||||||    
T  10100126 ttatccgatgtcccaag 10100110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 23765578 - 23765689
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||| ||||||| |||||||||||||||||| ||||||||| |||||||||||||||    
T  23765578 catgtttgcattggtttcaacaacattttgatttttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttcaatttttatcccctta 23765676  T
Q  382 tccaatgccccaa 394  Q
    || ||||| ||||    
T  23765677 tctaatgcaccaa 23765689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 282 - 388
Target Start/End: Original strand, 51266924 - 51267029
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||| |||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  51266924 catgtttgtattgatttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttctatttttatctcctta 51267022  T
Q  382 tccaatg 388  Q
    |||||||    
T  51267023 tccaatg 51267029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 27839415 - 27839303
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||| || ||||||||||||||||||||  |||| |||||||||||||| |||||| |||| |||||||||||||||||| ||||||    
T  27839415 catgtttgcattggttttaataacattttgacttttaaaaacttaaa-tttatcatttttcatcatttttcaatgctatatttctatttttattccctta 27839317  T
Q  382 tccaatgccccaag 395  Q
    ||||||||||||||    
T  27839316 tccaatgccccaag 27839303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 34316832 - 34316719
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| ||||| ||||  ||||||| |||||||||| |||||    
T  34316832 catgtttgcattggtttcaacaatattttgacttttaaaaagttaaattttatcacttttcactatttttcaatgttatatttatatttttatctcctta 34316733  T
Q  382 tccaatgccccaag 395  Q
    ||||||||||||||    
T  34316732 tccaatgccccaag 34316719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 282 - 395
Target Start/End: Original strand, 45688743 - 45688855
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| ||||||| |||||| |||||| |||| |||| ||||||||||||||||||||    
T  45688743 catgtttgcattagtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcatcatttttcaatgctatgtttctatttttatcccctta 45688841  T
Q  382 tccaatgccccaag 395  Q
    |||||| |||||||    
T  45688842 tccaataccccaag 45688855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 31754938 - 31755049
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| ||||||| |||||| |||||| |||| |||||||| ||||||||||||||||    
T  31754938 catgtttgcattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcatcatttttcaattctatatttatatttttatcccctta 31755036  T
Q  382 tccaatgccccaa 394  Q
    |||||| ||||||    
T  31755037 tccaataccccaa 31755049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 33951697 - 33951804
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||||||| |||||||||||||||||||| | |||||||||| |||| ||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  33951697 taacatgtttgtattggtttcaacaacattttaatttttaaaaagttaaa-tttatcacttttcacaattttccaatactatatttctatttttatcccc 33951795  T
Q  379 ttatccaat 387  Q
    |||| ||||    
T  33951796 ttattcaat 33951804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 30475426 - 30475529
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||| ||||||| ||||||||||||| ||||||||||||| |||||||||| ||||||    
T  30475426 atgtttgcattggtttcaacaatattttgacatttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttttatttttatctccttat 30475524  T
Q  383 ccaat 387  Q
    |||||    
T  30475525 ccaat 30475529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 26831894 - 26831783
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||| ||||||||||||||| | ||||||||||||||| ||||||| |||| |||||||| ||||| ||||||||||||||||||| ||||    
T  26831894 catgtttgcattg-tttcaacaacattttaatttttaaaaagataaa-tttatcactttttaccattttacaatattatatttctatttttatcctctta 26831797  T
Q  382 tccaatgccccaag 395  Q
    | ||||||||||||    
T  26831796 ttcaatgccccaag 26831783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 282 - 382
Target Start/End: Original strand, 20811263 - 20811362
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||| ||||||||| ||||||||  ||||||||||||||||||||||||    
T  20811263 catgtttgcattgattttaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccaatttccaatgttatatttctatttttatcccctta 20811361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 283 - 395
Target Start/End: Original strand, 31168135 - 31168246
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||| ||||||||||||||||||||||||||| ||||| || |||||||||| |||||||||||||||||| ||| | |||||||||||||||||| |    
T  31168135 atgtttacattggtttcaacaacattttgactttaaaaaa-attaaatttatcacttttcaccattttccaatgctaaaattctatttttatccccttgt 31168233  T
Q  383 ccaatgccccaag 395  Q
    | ||||| |||||    
T  31168234 ctaatgctccaag 31168246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 282 - 370
Target Start/End: Complemental strand, 19329037 - 19328950
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattt 370  Q
    ||||||||||||||||||||||| |||||||||||||||||| | ||||||||||  ||||||||||||||||| ||||||||||||||    
T  19329037 catgtttgcattggtttcaacaatattttgacttttaaaaag-ttaaatttatcacatttcaccattttccaatgctatatttctattt 19328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 282 - 388
Target Start/End: Complemental strand, 50514722 - 50514618
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||||||||| |||||||||||| | |||||||||| |||| |||||||| ||||  |||||||||| |||||||| ||||    
T  50514722 catgtttgcattggtttcaacaacattttaacttttaaaaag-ttaaatttatcactttttaccatttttcaatgttatatttcta-ttttatcctctta 50514625  T
Q  382 tccaatg 388  Q
    |||||||    
T  50514624 tccaatg 50514618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 282 - 362
Target Start/End: Complemental strand, 47188774 - 47188695
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatat 362  Q
    |||||||||||||||||||||||||||||||||||| | ||| | |||||||||| |||||||||||||||||||||||||    
T  47188774 catgtttgcattggtttcaacaacattttgactttttagaag-ttaaatttatcacttttcaccattttccaatactatat 47188695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 394
Target Start/End: Original strand, 54339121 - 54339223
Alignment:
Q  290 cattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 389  Q
    |||||||||||| || ||||||||||||||||| || |||||||||||||| ||||||||| ||||  ||||||| |||||||||||| |||||||||||    
T  54339121 cattggtttcaaaaatattttgacttttaaaaa-attaaatttatcatttt-caccatttttcaatgttatatttatatttttatccctttatccaatgc 54339218  T
Q  390 cccaa 394  Q
    |||||    
T  54339219 cccaa 54339223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 19876248 - 19876186
Alignment:
Q  327 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 389  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19876248 aaatttatcacttttcactattttccaatactatatttctatttttatccccttatccaatgc 19876186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 283 - 376
Target Start/End: Original strand, 52341602 - 52341694
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcc 376  Q
    ||||||||||||| ||||||||||||||||||||||||||| | ||||| ||||||||||| |||||||||| |  |||||||||||| |||||    
T  52341602 atgtttgcattggattcaacaacattttgacttttaaaaag-ttaaattcatcatttttcatcattttccaacataatatttctatttgtatcc 52341694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 395
Target Start/End: Complemental strand, 35675298 - 35675187
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    ||||||||||||  |||||||| ||||| |||||||||||| |||| || |||| ||||||| |||| ||||||| |||||||||||||||||  ||||     
T  35675298 atgtttgcattgaattcaacaatattttaacttttaaaaagttaaa-ttcatcacttttcactatttcccaatacaatatttctatttttatcgtcttaa 35675200  T
Q  383 ccaatgccccaag 395  Q
    |||||||||||||    
T  35675199 ccaatgccccaag 35675187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 283 - 391
Target Start/End: Original strand, 29462802 - 29462909
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||| |||||| |||||||||||||||||||| ||||| ||||||||  |||||||||| |||||| |||||  |||||| ||||||||||| ||||     
T  29462802 atgtttacattggattcaacaacattttgactttgaaaaa-ataaaattcctcatttttcatcatttttcaatataatatttttatttttatcctcttaa 29462900  T
Q  383 ccaatgccc 391  Q
     ||||||||    
T  29462901 acaatgccc 29462909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 40436081 - 40436192
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||| ||||||||||||| |||||||  ||||||||| |||| ||||| |||||||| ||||||  ||| |||| |||  |||||||||||||||    
T  40436081 catgtttgctttggtttcaacaatattttgatatttaaaaagttaaa-tttattatttttcatcattttttaatgctattttttcatttttatcccctta 40436179  T
Q  382 tccaatgccccaa 394  Q
    ||||||| |||||    
T  40436180 tccaatgtcccaa 40436192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 327 - 395
Target Start/End: Original strand, 51290474 - 51290542
Alignment:
Q  327 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    |||||||||| |||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  51290474 aaatttatcacttttcatcattttccaatgctatatttctaattttatccccttatccaatgtcccaag 51290542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 394
Target Start/End: Complemental strand, 53567062 - 53566948
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaat--ttatcatttttcaccattttccaatactatatttctatttttatcccct 379  Q
    |||||||||||  |||||||||||||||| |||||||||||| |||| |  |||  | |||| || ||||| |||| ||||||||||||||||||| | |    
T  53567062 catgtttgcatgagtttcaacaacattttaacttttaaaaagttaaatttattagtactttttactatttttcaatgctatatttctatttttatctctt 53566963  T
Q  380 tatccaatgccccaa 394  Q
    || ||||||||||||    
T  53566962 taaccaatgccccaa 53566948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 394
Target Start/End: Complemental strand, 46696026 - 46695960
Alignment:
Q  328 aatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaa 394  Q
    ||||||||| ||||||||||||| |||| |||||||| ||||||||||| |||||||||| ||||||    
T  46696026 aatttatcacttttcaccatttttcaatcctatatttttatttttatccacttatccaataccccaa 46695960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 13498224 - 13498120
Alignment:
Q  284 tgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatc 383  Q
    ||||| |||||| ||||||||  ||||||||||||||||| |||| || ||| || || || |||||||||||| |||||||||||||||||  |||| |    
T  13498224 tgtttacattggattcaacaaagttttgacttttaaaaagttaaa-ttcatcgttctttactattttccaatacaatatttctatttttatcatcttaac 13498126  T
Q  384 caatgc 389  Q
    ||||||    
T  13498125 caatgc 13498120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 394
Target Start/End: Complemental strand, 9693446 - 9693380
Alignment:
Q  327 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaa 394  Q
    ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||||| ||||    
T  9693446 aaatttatcatttttcacctttttc-aatattatatctttatttttatccccttatccaatgcgccaa 9693380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 395
Target Start/End: Original strand, 31487743 - 31487833
Alignment:
Q  304 acattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    |||||||||  ||||||||| | |||||||||| |||| || ||||| |||| |||||||| ||||||||||||||||| |||||| |||||    
T  31487743 acattttgatctttaaaaag-tcaaatttatcacttttaactatttttcaatgctatatttttatttttatccccttattcaatgctccaag 31487833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 388
Target Start/End: Complemental strand, 35511264 - 35511184
Alignment:
Q  307 ttttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatg 388  Q
    |||| |||||||||||| | ||||| |||| |||||||||||||||||||| ||||||||||||| |||  |||| ||||||    
T  35511264 ttttaacttttaaaaag-tcaaattcatcacttttcaccattttccaatacaatatttctattttcatctacttaaccaatg 35511184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 376
Target Start/End: Original strand, 3769816 - 3769906
Alignment:
Q  285 gtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcc 376  Q
    ||||||||||  || ||||| ||||| |||||||||||| | |||||||||| ||||||||||||| |||| | |||||||||  |||||||    
T  3769816 gtttgcattgaatttaacaatattttaacttttaaaaag-tcaaatttatcacttttcaccatttttcaatgcaatatttctaaatttatcc 3769906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 283 - 364
Target Start/End: Original strand, 45088071 - 45088148
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatattt 364  Q
    |||||||||||| ||||||||   |||||||||| ||||| || |||||||||| |||||| ||||||||||| ||||||||    
T  45088071 atgtttgcattgatttcaaca---ttttgactttcaaaaa-attaaatttatcacttttcatcattttccaatgctatattt 45088148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 9693580 - 9693534
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaa 328  Q
    ||||||||||||||||||||||| |||| ||||||||||||| ||||    
T  9693580 catgtttgcattggtttcaacaatatttcgacttttaaaaagttaaa 9693534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 30617954 - 30618057
Alignment:
Q  287 ttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaa 386  Q
    ||||||||| |||||||| ||||  |||||||||||| | ||||| ||   |||||| ||||| ||||| | |||||||||| ||||||| |||| ||||    
T  30617954 ttgcattggattcaacaatatttgaacttttaaaaag-ttaaattcattgcttttcatcatttcccaatgcaatatttctatgtttatcctcttaaccaa 30618052  T
Q  387 tgccc 391  Q
    |||||    
T  30618053 tgccc 30618057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 375
Target Start/End: Original strand, 52895749 - 52895816
Alignment:
Q  307 ttttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 375  Q
    ||||||||||||||||| |||||||| ||| ||||||| ||||  |||||| || ||||||||||||||    
T  52895749 ttttgacttttaaaaagttaaaattt-tcacttttcacaatttctcaatacaatgtttctatttttatc 52895816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 366
Target Start/End: Original strand, 15986267 - 15986349
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttct 366  Q
    ||||||||||||  |||||||| ||| |||||||||||||  | ||||| | || ||||||||||||| |||||| ||||||||    
T  15986267 atgtttgcattgaattcaacaatattctgacttttaaaaa-tttaaattcaccacttttcaccatttttcaatacaatatttct 15986349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 395
Target Start/End: Complemental strand, 16560041 - 16559991
Alignment:
Q  345 cattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    |||||||||| || | |||||||||||||| || |||||||||||||||||    
T  16560041 cattttccaacacaaaatttctatttttattcctttatccaatgccccaag 16559991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 282 - 384
Target Start/End: Original strand, 20456569 - 20456670
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||  |||||||| ||||| || ||||||||  |||| || || | |||||| |||||| |||||  | |||||||||||||||| ||||    
T  20456569 catgtttgcattgaattcaacaatattttaacatttaaaaatttaaa-ttcataacttttcatcatttttcaataaaacatttctatttttatcctctta 20456667  T
Q  382 tcc 384  Q
    |||    
T  20456668 tcc 20456670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 372
Target Start/End: Complemental strand, 35927379 - 35927294
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttt 372  Q
    |||||||| | |||||||| ||||| |||||||||||| | ||||| ||| ||||||||||||||| ||| | | ||| ||||||||    
T  35927379 tttgcattagattcaacaatattttaacttttaaaaag-ttaaattcatcgtttttcaccattttctaatgcaaaattgctattttt 35927294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 375
Target Start/End: Complemental strand, 36486780 - 36486703
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 375  Q
    ||||| || ||||||||||||||||| || |||||  ||| |||||||||||||||||||  || ||| ||||||||||    
T  36486780 ttcaataatattttgacttttaaaaa-attaaattcttcacttttcaccattttccaatataatgtttatatttttatc 36486703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 375
Target Start/End: Original strand, 55120106 - 55120183
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 375  Q
    ||||||||  ||||||||||||||||| | |||||  ||||||||||| ||||| |||||| ||||||  |||||||||    
T  55120106 ttcaacaatgttttgacttttaaaaag-tcaaattcttcatttttcactatttttcaatacaatattttaatttttatc 55120183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 391
Target Start/End: Complemental strand, 19328777 - 19328748
Alignment:
Q  362 tttctatttttatccccttatccaatgccc 391  Q
    ||||||||||||||||||||||||||||||    
T  19328777 tttctatttttatccccttatccaatgccc 19328748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 388
Target Start/End: Original strand, 48513624 - 48513724
Alignment:
Q  287 ttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaa 386  Q
    ||||||||  ||||||||  ||||||||||||||||| | |||| | ||| |||||| |||||| |||||| || ||| ||||||||||  |||| ||||    
T  48513624 ttgcattgaattcaacaatgttttgacttttaaaaag-ttaaatctttcacttttcatcatttttcaatacaatgtttttatttttatcgtcttaaccaa 48513722  T
Q  387 tg 388  Q
    ||    
T  48513723 tg 48513724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 1e-45; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 282 - 395
Target Start/End: Original strand, 34874567 - 34874679
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  34874567 catgtttgcattggtttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccattttccaatgctatatttctatttttatcccctta 34874665  T
Q  382 tccaatgccccaag 395  Q
    ||||||||||||||    
T  34874666 tccaatgccccaag 34874679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 932263 - 932151
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||| |||||||||||||||||||||||||||| || |||||||| |||||||| ||||||||||| |||||||||||||||||||||||||    
T  932263 catgtttgcattagtttcaacaacattttgacttttaaaaa-attaaatttataatttttcatcattttccaatgctatatttctatttttatcccctta 932165  T
Q  382 tccaatgccccaag 395  Q
    ||||||||||||||    
T  932164 tccaatgccccaag 932151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 22346343 - 22346231
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||| ||||||||||||||||| || |||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||    
T  22346343 catgtttgcattggtttcaacaatattttgacttttaaaaa-attaaatttatcacttttcaccatttttcaatactatatttctatttttattccctta 22346245  T
Q  382 tccaatgccccaag 395  Q
    ||||| ||||||||    
T  22346244 tccaaagccccaag 22346231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 41147584 - 41147472
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| || ||||||||| |||||||| |||| |||||||||||||||||||||||||    
T  41147584 catgtttgcattggtttcaacaatattttgacttttaaaaagttaaa-ttaatcattttttaccatttttcaatgctatatttctatttttatcccctta 41147486  T
Q  382 tccaatgccccaag 395  Q
    ||||||||||||||    
T  41147485 tccaatgccccaag 41147472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 42607430 - 42607326
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  42607430 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcaccatttttcaatgctatatttttatttttatcccctta 42607332  T
Q  382 tccaat 387  Q
    ||||||    
T  42607331 tccaat 42607326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 283 - 395
Target Start/End: Complemental strand, 27209826 - 27209715
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| ||||||| ||||||||||||||||||  |||||||||||||||||||| ||||    
T  27209826 atgtttgcattggtttcaacaacattttaacttttaaaaagttaaa-tttatcaattttcaccattttccaatgttatatttctatttttatccctttat 27209728  T
Q  383 ccaatgccccaag 395  Q
    |||||||||||||    
T  27209727 ccaatgccccaag 27209715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 11385908 - 11385810
Alignment:
Q  290 cattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 389  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11385908 cattggtttcaacaacattttgacttttaaaaagttaaa-tttataacttttcaccattttccaatactatatttctatttttatccccttatccaatgc 11385810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 49508839 - 49508728
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||||| |||| |||||||||||||||||| |||| ||||||| ||| |||||||||||||| |||||||||||||||||||||||||    
T  49508839 catgtttgcattggtttcgacaatattttgacttttaaaaagttaaa-tttatcacttt-caccattttccaatgctatatttctatttttatcccctta 49508742  T
Q  382 tccaatgccccaag 395  Q
    ||||||||||||||    
T  49508741 tccaatgccccaag 49508728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 279 - 387
Target Start/End: Complemental strand, 6170660 - 6170553
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| | |||||||||| ||||||||||||||||||| |     
T  6170660 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcatttttctctattttccaatgctatatttctatttttatctct 6170562  T
Q  379 ttatccaat 387  Q
    |||||||||    
T  6170561 ttatccaat 6170553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 283 - 395
Target Start/End: Original strand, 43433776 - 43433887
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    ||||||| |||||||||||||||||||| | |||||||||| |||| ||||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  43433776 atgtttgtattggtttcaacaacattttaatttttaaaaagttaaa-tttatcacttttcaccattttttaatactatatttctatttttatccccttat 43433874  T
Q  383 ccaatgccccaag 395  Q
    |||||||||||||    
T  43433875 ccaatgccccaag 43433887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 49901926 - 49902037
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||||||||||| |||| || ||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  49901926 catgtttgcattggtttcaacaacgttttaacgtttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttctatttttatcctctta 49902024  T
Q  382 tccaatgccccaa 394  Q
    |||||| ||||||    
T  49902025 tccaataccccaa 49902037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 286 - 394
Target Start/End: Complemental strand, 50295535 - 50295428
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 385  Q
    ||||||||| ||||||||| |||||||||||||||||| |||| ||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||    
T  50295535 tttgcattgatttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcactattttccaatactatatttctatttttacccccttatcca 50295437  T
Q  386 atgccccaa 394  Q
    |||||||||    
T  50295436 atgccccaa 50295428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 282 - 388
Target Start/End: Complemental strand, 47655477 - 47655372
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| |||| ||||| |||||||||||||||||||    
T  47655477 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcaattttcaccatttttcaatgctatacttctatttttatcccctta 47655379  T
Q  382 tccaatg 388  Q
    | |||||    
T  47655378 ttcaatg 47655372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 282 - 395
Target Start/End: Original strand, 11385981 - 11386093
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||| ||||||||||||||||||||  |||    
T  11385981 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcaatttttaccattttccaatgctatatttctatttttatccaatta 11386079  T
Q  382 tccaatgccccaag 395  Q
    || |||| ||||||    
T  11386080 tctaatgtcccaag 11386093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 282 - 395
Target Start/End: Original strand, 29966822 - 29966935
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||| ||||||||||| ||||| || |||||||||||||||  ||||||| |||| |||||||| ||||||||||||||||    
T  29966822 catgtttgcattggtttcaacaatattttgactttaaaaaaaattaaatttatcattttttgccatttttcaatgctatatttatatttttatcccctta 29966921  T
Q  382 tccaatgccccaag 395  Q
    |||||||| |||||    
T  29966922 tccaatgctccaag 29966935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 33929966 - 33930070
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||| ||||| |||| |||||||| ||||||||||||||||    
T  33929966 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcagttttcactatttttcaatgctatatttatatttttatcccctta 33930064  T
Q  382 tccaat 387  Q
    ||||||    
T  33930065 tccaat 33930070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 279 - 395
Target Start/End: Complemental strand, 2125816 - 2125701
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||| ||| ||| |||||| |||||||||||||||||||||| |||| ||||||| ||||||| ||||| |||| ||||||||||||||||||||||    
T  2125816 taacatggttgtatttgtttcatcaacattttgacttttaaaaagttaaa-tttatcacttttcacaatttttcaatgctatatttctatttttatcccc 2125718  T
Q  379 ttatccaatgccccaag 395  Q
    |||||||||||||||||    
T  2125717 ttatccaatgccccaag 2125701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 24140773 - 24140883
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||  |||||||  |||||||||||||||||| ||||||||||||||||||||||||    
T  24140773 catgtttgcattggtttcaacaacattttgactttaaaaaagttaag-tttatcacgtttcaccattttccaatagtatatttctatttttatcccctta 24140871  T
Q  382 tccaatgccccaa 394  Q
    | |||||||||||    
T  24140872 t-caatgccccaa 24140883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 282 - 389
Target Start/End: Complemental strand, 4940846 - 4940740
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||| |||||||| ||||| |||||||||||||||||| |||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||    
T  4940846 catgtttgtattggttttaacaatattttgacttttaaaaagttaaa-tttatcacttttaaccattttccaatgctatatttctatttttatcccctta 4940748  T
Q  382 tccaatgc 389  Q
    ||||||||    
T  4940747 tccaatgc 4940740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 289 - 395
Target Start/End: Complemental strand, 32213988 - 32213883
Alignment:
Q  289 gcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatg 388  Q
    |||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||  | |||||||||||||||||||||||| ||||    
T  32213988 gcattggtttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccattttccaatgttctatttctatttttatccccttatctaatg 32213890  T
Q  389 ccccaag 395  Q
     ||||||    
T  32213889 tcccaag 32213883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 284 - 388
Target Start/End: Original strand, 40845253 - 40845356
Alignment:
Q  284 tgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatc 383  Q
    ||||||| ||||||||||||| ||||||| |||||||||| |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||     
T  40845253 tgtttgctttggtttcaacaatattttgatttttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttctatttttatccccttatt 40845351  T
Q  384 caatg 388  Q
    |||||    
T  40845352 caatg 40845356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 282 - 390
Target Start/End: Original strand, 52396443 - 52396549
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||| ||||||| || |||||||||||||||||| |||| ||||||| |||| | |||||| ||||||||||||||||||||||||||||||    
T  52396443 catgtttgcatttgtttcaataatattttgacttttaaaaagttaaa-tttatcactttt-atcatttttcaatactatatttctatttttatcccctta 52396540  T
Q  382 tccaatgcc 390  Q
    |||||||||    
T  52396541 tccaatgcc 52396549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 7190581 - 7190469
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||| ||||||||| |||||| |||||||||||| |||| ||||||| |||||| ||||||  ||| |||||||||||||||||||| ||||    
T  7190581 catgtttgcattagtttcaacaccattttaacttttaaaaagttaaa-tttatcacttttcatcatttttgaatgctatatttctatttttatcctctta 7190483  T
Q  382 tccaatgccccaag 395  Q
     |||||||||||||    
T  7190482 accaatgccccaag 7190469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 28851011 - 28850904
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 385  Q
    |||||||||||||||||||  ||||||||||||||||| |||| ||||||| ||||||||||||||||||  ||||||||||||||||| | |||||| |    
T  28851011 tttgcattggtttcaacaat-ttttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatgttatatttctatttttattctcttatcta 28850914  T
Q  386 atgccccaag 395  Q
    ||||||||||    
T  28850913 atgccccaag 28850904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 26469687 - 26469584
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||| |||||||||||| || |||||||||||||||||| |||| ||||||||||||||  ||||| |||| |||||||| |||||||||||| ||||    
T  26469687 atgttttcattggtttcaataatattttgacttttaaaaagttaaa-tttatcatttttcattatttttcaatgctatatttttatttttatccctttat 26469589  T
Q  383 ccaat 387  Q
    |||||    
T  26469588 ccaat 26469584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 279 - 387
Target Start/End: Complemental strand, 28277591 - 28277484
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    |||||||||||||||| ||||||||||||||| | |||||||||| | |||||||||| |||| | |||||| ||||  ||||||||||||||||||| |    
T  28277591 taacatgtttgcattgttttcaacaacattttaatttttaaaaag-ttaaatttatcactttttatcatttttcaatgttatatttctatttttatcctc 28277493  T
Q  379 ttatccaat 387  Q
    |||||||||    
T  28277492 ttatccaat 28277484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 279 - 375
Target Start/End: Original strand, 50154470 - 50154565
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 375  Q
    |||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||| | |||||| |||| |||||||| ||||||||||    
T  50154470 taacatgtttgcattggtttcaacaacattttaactttt-aaaaggttaaatttatcattttttatcatttttcaatgctatatttatatttttatc 50154565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 279 - 395
Target Start/End: Original strand, 44286869 - 44286984
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    |||||||||||||||||||| || || ||||| | |||||||||| |||| ||||||||||||||| ||| || |||||| ||||| |||||||||||      
T  44286869 taacatgtttgcattggttttaataatattttaatttttaaaaagttaaa-tttatcatttttcactattctctaatactgtatttttatttttatcctt 44286967  T
Q  379 ttatccaatgccccaag 395  Q
    ||||  |||||||||||    
T  44286968 ttatataatgccccaag 44286984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 303 - 395
Target Start/End: Original strand, 45721773 - 45721864
Alignment:
Q  303 aacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    |||||||||| |||||||||| |||| ||||||| |||| |||||||||||||  ||||||| |||||||||| ||||||||||||| |||||    
T  45721773 aacattttgatttttaaaaagttaaa-tttatcagtttttaccattttccaatgttatatttttatttttatcaccttatccaatgctccaag 45721864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 279 - 362
Target Start/End: Original strand, 47895331 - 47895413
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatat 362  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||| | ||||||||||  |||||||||||| |||||||||||    
T  47895331 taacatgtttgcattagtttcaacaatattttgacatttaaaaag-ttaaatttatcacctttcaccatttttcaatactatat 47895413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 388
Target Start/End: Original strand, 4656020 - 4656121
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 385  Q
    |||||||| |||||||||||||||| | |||||||||| |||| ||||||| |||| || ||||||||||  ||||||| |||||||||  |||||||||    
T  4656020 tttgcattagtttcaacaacattttaatttttaaaaagttaaa-tttatcactttttactattttccaatgttatatttttatttttatttccttatcca 4656118  T
Q  386 atg 388  Q
    |||    
T  4656119 atg 4656121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 395
Target Start/End: Original strand, 5945447 - 5945532
Alignment:
Q  309 ttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||   ||||||||||||||||  | ||||||||||| |||||    
T  5945447 ttgacttttaaaaag-taaaatttatcacttttcaccatttttcaatgtcatatttctatttttatttcgttatccaatgctccaag 5945532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 395
Target Start/End: Original strand, 14331852 - 14331949
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    ||||||||  ||||||||||||||||| |||| | | |||||||||||||||| ||||||| || ||||||||||||||   ||| |||||||||||||    
T  14331852 ttcaacaatgttttgacttttaaaaagttaaattct-tcatttttcaccatttcccaatacaatgtttctatttttatcattttaaccaatgccccaag 14331949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 395
Target Start/End: Original strand, 16691309 - 16691406
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    ||||||||  ||||||||||||||||| |||| | | |||||||| ||||||| ||||||| || ||||||||||||||  |||| |||||||||||||    
T  16691309 ttcaacaatgttttgacttttaaaaagttaaattct-tcattttttaccatttcccaatacaatgtttctatttttatcatcttaaccaatgccccaag 16691406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 391
Target Start/End: Original strand, 17402963 - 17403056
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccc 391  Q
    |||||||| |||||||||||||||||| |||| || |||| |||| ||||||||  ||||| ||||||  ||||||||||||||| |||||||||    
T  17402963 ttcaacaatattttgacttttaaaaagttaaa-ttcatcactttttaccattttttaatacaatattttaatttttatccccttaaccaatgccc 17403056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 31975484 - 31975591
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||||||||||| |||| ||||| ||||||| |||||||||| | ||||||| || |||| | |||||| ||||  ||||||||||||| |||| |     
T  31975484 taacatgtttgcattagttttaacaatattttgatttttaaaaag-ttaaatttaccactttttatcatttttcaatgttatatttctatttatatctct 31975582  T
Q  379 ttatccaat 387  Q
    |||||||||    
T  31975583 ttatccaat 31975591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 375
Target Start/End: Original strand, 48938651 - 48938727
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 375  Q
    ||||||||  |||||||||||||||||   |||||| ||| |||||||||||||| ||||| |||||||||||||||||    
T  48938651 ttcaacaatgttttgacttttaaaaagt--aaatttttcacttttcaccattttctaatacaatatttctatttttatc 48938727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 345 - 395
Target Start/End: Original strand, 8244150 - 8244200
Alignment:
Q  345 cattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  8244150 cattttccaatgttatatttctatatttatccccttatccaatgccccaag 8244200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 297 - 391
Target Start/End: Original strand, 43168156 - 43168249
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccc 391  Q
    ||||||||  ||||||||||||||||| |||| | | ||| |||||||||||| ||||||| || ||||||||||||||  |||| |||||||||    
T  43168156 ttcaacaatgttttgacttttaaaaagttaaactct-tcacttttcaccatttcccaatacaatgtttctatttttatcatcttaaccaatgccc 43168249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 30222624 - 30222697
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatacta 359  Q
    ||||||||||||||||||| ||||| |||||| |||| || |||||||||| ||| || ||||||| |||||||    
T  30222624 tttgcattggtttcaacaatattttaactttttaaaaaattaaatttatcactttccatcattttctaatacta 30222697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 395
Target Start/End: Complemental strand, 44359763 - 44359666
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    ||||||||  ||||||||||||||||| |||| | | ||| |||||||||||| || |||| || ||||||||||||||  |||| |||||| ||||||    
T  44359763 ttcaacaatgttttgacttttaaaaagttaaattct-tcacttttcaccatttcccgatacaatgtttctatttttatcatcttaaccaatggcccaag 44359666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 286 - 388
Target Start/End: Original strand, 40920189 - 40920292
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcat--ttttcaccattttccaatactatatttctatttttatccccttatc 383  Q
    |||||||||| |||||||| ||||| |||||||||||| |||| || ||||   ||||||||| ||  |||| | |||||||||||||||||| |||| |    
T  40920189 tttgcattggattcaacaatattttaacttttaaaaagttaaa-ttaatcacacttttcaccacttctcaatgcaatatttctatttttatcctcttaac 40920287  T
Q  384 caatg 388  Q
    |||||    
T  40920288 caatg 40920292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 390
Target Start/End: Original strand, 41492912 - 41493015
Alignment:
Q  285 gtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcc 384  Q
    |||||||| || |||| ||| ||||| |||||||||| | ||||||| |||| ||||||||| || ||||| | ||||||||| |||||||| |||| ||    
T  41492912 gtttgcatgggattcatcaatattttaacttttaaaatg-taaaattcatcacttttcaccacttcccaatgcaatatttcta-ttttatcctcttaacc 41493009  T
Q  385 aatgcc 390  Q
    ||||||    
T  41493010 aatgcc 41493015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 297 - 370
Target Start/End: Complemental strand, 41898950 - 41898878
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattt 370  Q
    |||||||| ||||| |||||||||||| |||| || |||| |||| |||||||| |||||| ||||||||||||    
T  41898950 ttcaacaatattttaacttttaaaaagttaaa-ttcatcactttttaccatttttcaatacaatatttctattt 41898878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 375
Target Start/End: Complemental strand, 8892852 - 8892785
Alignment:
Q  307 ttttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 375  Q
    ||||||||||||||||| |||| | | | | |||||||||||||||||||| || ||||||||||||||    
T  8892852 ttttgacttttaaaaagttaaattcttt-acttttcaccattttccaatacgatgtttctatttttatc 8892785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 27210750 - 27210823
Alignment:
Q  307 ttttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||| |||||||||||| |||| || |||||||||||||||||| || ||| ||| || ||||||||||| ||||    
T  27210750 ttttaacttttaaaaagttaaa-ttgatcatttttcaccatttttcattacaatagttttatttttatcctctta 27210823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 389
Target Start/End: Original strand, 30222991 - 30223025
Alignment:
Q  355 tactatatttctatttttatccccttatccaatgc 389  Q
    |||||||||| ||||||||||||||||||||||||    
T  30222991 tactatatttatatttttatccccttatccaatgc 30223025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 2e-44; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 282 - 393
Target Start/End: Original strand, 6999202 - 6999312
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6999202 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcaccattttccaatactatatttctatttttatctcctta 6999300  T
Q  382 tccaatgcccca 393  Q
    |||| |||||||    
T  6999301 tccattgcccca 6999312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 283 - 395
Target Start/End: Complemental strand, 765258 - 765147
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||| ||||||||||  |||||||||||||||||||||||||    
T  765258 atgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcacaattttccaatgttatatttctatttttatccccttat 765160  T
Q  383 ccaatgccccaag 395  Q
    |||||||||||||    
T  765159 ccaatgccccaag 765147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 286 - 388
Target Start/End: Original strand, 2966544 - 2966645
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 385  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  2966544 tttgcattggtttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccattttccaatgttatatttctatttttatccccttatcca 2966642  T
Q  386 atg 388  Q
    |||    
T  2966643 atg 2966645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 282 - 391
Target Start/End: Original strand, 862589 - 862697
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  862589 catgtttgcattggtttcaacaagattttgactcttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttctatttttatcccatta 862687  T
Q  382 tccaatgccc 391  Q
    | ||||||||    
T  862688 ttcaatgccc 862697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 39401643 - 39401532
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||| |||||||||||||| |||||||||||||||||| ||||  |||||| ||||||||||||| ||||  ||||||||||||||||||||||||    
T  39401643 catgtttgtattggtttcaacaaaattttgacttttaaaaagttaaa--ttatcacttttcaccatttttcaatgttatatttctatttttatcccctta 39401546  T
Q  382 tccaatgccccaag 395  Q
    ||||||||||||||    
T  39401545 tccaatgccccaag 39401532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 279 - 395
Target Start/End: Original strand, 16361563 - 16361678
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||||| |||| |||||||||||||  ||||||||||||||||| |||    
T  16361563 taacatgtttgcattggtttcgacaacattttgacttttataaagttaaa-tttatcaatttttaccattttccaatgttatatttctatttttattccc 16361661  T
Q  379 ttatccaatgccccaag 395  Q
    ||||||||||| |||||    
T  16361662 ttatccaatgctccaag 16361678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 282 - 395
Target Start/End: Original strand, 17603811 - 17603923
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||| |||||| ||||||||||||||||||||| |||| |||||||||||| | |||||| |||| ||||||||||||||||||| | |||    
T  17603811 catgtttgcattgatttcaataacattttgacttttaaaaagttaaa-tttatcattttttatcatttttcaatgctatatttctatttttatcgcgtta 17603909  T
Q  382 tccaatgccccaag 395  Q
    ||||||||||||||    
T  17603910 tccaatgccccaag 17603923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 282 - 395
Target Start/End: Original strand, 33726380 - 33726492
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||| |||| ||||||||| ||||| ||||||| |||| |||| ||||| ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  33726380 catgtttgtattgatttcaacaatattttaacttttagaaagttaaa-tttattatttttcaccatttttcaatactatatttttatttttatcccctta 33726478  T
Q  382 tccaatgccccaag 395  Q
    ||||||||||||||    
T  33726479 tccaatgccccaag 33726492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 39085901 - 39085789
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| |||| | |||||||||||  |||||||||||||||||||| |||    
T  39085901 catgtttgcattgatttcaacaacattttgacttttaaaaagttaaa-tttatcactttttatcattttccaatgttatatttctatttttatcccttta 39085803  T
Q  382 tccaatgccccaag 395  Q
    ||||||| ||||||    
T  39085802 tccaatgtcccaag 39085789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 41436478 - 41436582
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||||||||||||||||||||||||||||| | || ||||||| |||||| |||||| ||||||||||||| ||||||||||||||||    
T  41436478 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaagtttatcacttttcatcatttttcaatactatatttttatttttatcccctta 41436576  T
Q  382 tccaat 387  Q
    | ||||    
T  41436577 ttcaat 41436582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 283 - 395
Target Start/End: Original strand, 27495124 - 27495235
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||||||||||||||||||||||||||| |||||||| | |||| ||||||| |||||||||||||| |||  ||||||| |||||||||||||||||    
T  27495124 atgtttgcattggtttcaacaacattttgatttttaaaatgttaaa-tttatcacttttcaccattttctaatgttatatttttatttttatccccttat 27495222  T
Q  383 ccaatgccccaag 395  Q
     ||||||||||||    
T  27495223 tcaatgccccaag 27495235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 279 - 388
Target Start/End: Complemental strand, 17118484 - 17118377
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    |||||| |||||||||||||||||||||||| || |||||||||| |||| |||||||||||||| ||||||||| || ||||||||||||||||||||     
T  17118484 taacatatttgcattggtttcaacaacattt-gagttttaaaaagttaaa-tttatcatttttcaacattttccagtattatatttctatttttatccct 17118387  T
Q  379 ttatccaatg 388  Q
    ||||||||||    
T  17118386 ttatccaatg 17118377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 395
Target Start/End: Original strand, 1321168 - 1321280
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||| ||||| ||||||||||||||||| ||||||| || |||| ||||| |||||| |||||||||||||  ||||||||||||||||||| ||||    
T  1321168 catgtttacattgatttcaacaacattttgatttttaaagagttaaa-tttattattttttaccattttccaatgttatatttctatttttatcctctta 1321266  T
Q  382 tccaatgccccaag 395  Q
    |||||||| |||||    
T  1321267 tccaatgctccaag 1321280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 391
Target Start/End: Complemental strand, 35445400 - 35445291
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||| |||||||||||||| |||||||||||| ||||  | |||||||||| ||||||||||||| ||||  ||||||| ||||||||||||||||    
T  35445400 catgtttgtattggtttcaacaatattttgacttttgaaaaagttaaatttatcacttttcaccatttttcaatgttatatttatatttttatcccctta 35445301  T
Q  382 tccaatgccc 391  Q
    | ||||||||    
T  35445300 ttcaatgccc 35445291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 279 - 388
Target Start/End: Complemental strand, 9201606 - 9201499
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||| |||| ||||||| |||||||||||||  |||| |||||| ||||||||||| |     
T  9201606 taacatgtttgtattggtt-caacaacattttgacttttaaaaagttaaa-tttatcacttttcaccattttttaatattatattcctatttttatctca 9201509  T
Q  379 ttatccaatg 388  Q
    ||||||||||    
T  9201508 ttatccaatg 9201499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 17095171 - 17095068
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 385  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||  |    |||||||||||||||||||| |||||||    
T  17095171 tttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcacttttcaccatttt-tagagttatatttctatttttatccctttatcca 17095074  T
Q  386 atgccc 391  Q
    ||||||    
T  17095073 atgccc 17095068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 279 - 388
Target Start/End: Original strand, 33864352 - 33864460
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    |||||| ||||||||||||||||||| |||||||||||||||| | | |||||||| | |||||||||||||||||| | |||||| ||||||||||| |    
T  33864352 taacatatttgcattggtttcaacaatattttgacttttaaaatg-ttaaatttattacttttcaccattttccaatgcgatatttttatttttatcctc 33864450  T
Q  379 ttatccaatg 388  Q
    |||| |||||    
T  33864451 ttattcaatg 33864460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 375
Target Start/End: Original strand, 44173120 - 44173211
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 375  Q
    ||||||| |||||||||||||||||||| | ||||||||| || ||||||||||||||||| |||||| |||| |||||||||||||||||||    
T  44173120 atgtttgtattggtttcaacaacattttaatttttaaaaa-attaaatttatcatttttcatcatttttcaatgctatatttctatttttatc 44173211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 394
Target Start/End: Complemental strand, 44299782 - 44299679
Alignment:
Q  290 cattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 389  Q
    ||||||||||||||| |||||||||||||||| | |||| ||||||| ||||||||||||| | |  |||||||||||||||||||| |||| |||||||    
T  44299782 cattggtttcaacaatattttgacttttaaaatgttaaa-tttatcacttttcaccatttttcgaggctatatttctatttttatcctcttacccaatgc 44299684  T
Q  390 cccaa 394  Q
    |||||    
T  44299683 cccaa 44299679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 273 - 383
Target Start/End: Complemental strand, 13998022 - 13997913
Alignment:
Q  273 tcttgctaacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttt 372  Q
    ||||| || |||||||| |||| ||||||||| ||||| | |||||||||| |||| ||||||||||||||| ||||| |||| ||||||||||||||||    
T  13998022 tcttgttagcatgtttgtattgatttcaacaatattttaatttttaaaaagttaaa-tttatcatttttcacaatttttcaatgctatatttctattttt 13997924  T
Q  373 atccccttatc 383  Q
    || ||||||||    
T  13997923 attcccttatc 13997913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 17056162 - 17056059
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 385  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||  | |  ||||||||| |||||||||| |||||||    
T  17056162 tttgcattggtttcaacaacattttgtcttttaaaaag-ttaaatttatcacttttcaccatttt-tagtgttatatttctttttttatccctttatcca 17056065  T
Q  386 atgccc 391  Q
    ||||||    
T  17056064 atgccc 17056059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 17068609 - 17068506
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 385  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||  | |  ||||||||| |||||||||| |||||||    
T  17068609 tttgcattggtttcaacaacattttgtcttttaaaaag-ttaaatttatcacttttcaccatttt-tagtgttatatttctttttttatccctttatcca 17068512  T
Q  386 atgccc 391  Q
    ||||||    
T  17068511 atgccc 17068506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 383
Target Start/End: Original strand, 464792 - 464896
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatca-tttttcaccattttccaatactatatttctatttttatccc 377  Q
    ||||||||||| |||| |||||| |||||||| |||||||||||| ||||| |||||| ||||| |||||||| ||||  ||||||||||||||||||||    
T  464792 taacatgtttgtattgatttcaataacattttaacttttaaaaagttaaaa-ttatcatttttttaccatttttcaatgttatatttctatttttatccc 464890  T
Q  378 cttatc 383  Q
     |||||    
T  464891 tttatc 464896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 17074592 - 17074489
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 385  Q
    |||||||| ||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||  | |  |||||||||||||||||||| ||||| |    
T  17074592 tttgcattagtttcaacaacattttgtcttttaaaaag-ttaaatttatcacttttcaccatttt-tagtgttatatttctatttttatccctttatcta 17074495  T
Q  386 atgccc 391  Q
    ||||||    
T  17074494 atgccc 17074489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 356
Target Start/End: Complemental strand, 23685764 - 23685688
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaata 356  Q
    |||||||||||||||| |||||| ||||||||||||||||||||| | |||||||||| ||||| |||||||||||||    
T  23685764 taacatgtttgcattgatttcaataacattttgacttttaaaaag-ttaaatttatcacttttccccattttccaata 23685688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 328
Target Start/End: Complemental strand, 11445431 - 11445382
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaa 328  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  11445431 taacatgtttgcattggtttcaacaacattttgacatttaaaaagttaaa 11445382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 386
Target Start/End: Complemental strand, 34334270 - 34334167
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||| ||||| |||||||| ||||| | || ||||||| | || ||| |||||||| ||||||||| ||||| |||||||||||||||||  ||||    
T  34334270 catgtttgtattggattcaacaatattttaatttgtaaaaagtttaa-tttgtcattttttaccattttcaaatacaatatttctatttttatcatctta 34334172  T
Q  382 tccaa 386  Q
    |||||    
T  34334171 tccaa 34334167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 388
Target Start/End: Original strand, 2239586 - 2239687
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 385  Q
    |||| ||||| |||||||| ||||| |||||||||||| | ||||| ||||||||| |||||||| || | | |||||||||| ||||||| |||| |||    
T  2239586 tttgtattggattcaacaatattttaacttttaaaaag-ttaaattcatcattttttaccatttttcattgcaatatttctatctttatcctcttaacca 2239684  T
Q  386 atg 388  Q
    |||    
T  2239685 atg 2239687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 387
Target Start/End: Complemental strand, 43140419 - 43140328
Alignment:
Q  295 gtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaat 387  Q
    ||||||| || ||||| | |||||||||| |||| |||||||||||||  |||||| ||||  ||||||| ||||||||||| ||||||||||    
T  43140419 gtttcaataatatttttaattttaaaaagttaaa-tttatcatttttcgtcatttttcaatgttatatttttatttttatcctcttatccaat 43140328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 343
Target Start/End: Original strand, 15004927 - 15004987
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttca 343  Q
    |||||||| |||||||||||||||||||| | |||||||||| | |||||||||| ||||||    
T  15004927 catgtttgtattggtttcaacaacattttaatttttaaaaag-ttaaatttatcacttttca 15004987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 11445356 - 11445313
Alignment:
Q  327 aaatttatcatttttcaccattttccaatactatatttctattt 370  Q
    |||||||||||||||||||||||| ||||  |||||||||||||    
T  11445356 aaatttatcatttttcaccatttttcaatgttatatttctattt 11445313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 388
Target Start/End: Complemental strand, 34220740 - 34220650
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatg 388  Q
    |||||||| ||||| |||||||||||  |||| || |||| ||||||||| || ||||| | | |||||||||||||||| |||| ||||||    
T  34220740 ttcaacaatattttaacttttaaaaacttaaa-ttcatcacttttcaccacttcccaatgcaagatttctatttttatcctcttaaccaatg 34220650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 388
Target Start/End: Original strand, 2805382 - 2805488
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaaga-taaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||| ||| | |||||||| ||||||||||||||||| | | ||||| |||| |||| |  ||||| |||||| ||| || ||||||||||| ||||    
T  2805382 atgtttgtattagattcaacaatattttgacttttaaaaaaagttaaattcatcacttttaattatttttcaatacaatacttatatttttatcctctta 2805481  T
Q  382 tccaatg 388  Q
     ||||||    
T  2805482 accaatg 2805488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 395
Target Start/End: Original strand, 11659277 - 11659374
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    |||||||| ||||| | |||||||||| |||| | | ||| ||||||| ||||| |||||| |||||| ||||||||||| |||| | ||||| |||||    
T  11659277 ttcaacaatattttaatttttaaaaagttaaattct-tcacttttcactatttttcaatacaatatttttatttttatcctcttaacgaatgctccaag 11659374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 395
Target Start/End: Complemental strand, 12695286 - 12695233
Alignment:
Q  342 caccattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    |||||||||||||||| || ||||||||||||||  |||| ||||||| |||||    
T  12695286 caccattttccaatacaatgtttctatttttatcatcttaaccaatgctccaag 12695233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 1729528 - 1729592
Alignment:
Q  327 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccc 391  Q
    |||| ||||||||||||||||||| |||||| | |||||||  ||| ||| |||| |||||||||    
T  1729528 aaatctatcatttttcaccatttttcaatacaacatttctaagtttgtcctcttaaccaatgccc 1729592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 374
Target Start/End: Complemental strand, 34316378 - 34316342
Alignment:
Q  338 ttttcaccattttccaatactatatttctatttttat 374  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  34316378 ttttcaccatttttcaatacaatatttctatttttat 34316342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 374
Target Start/End: Original strand, 37230267 - 37230311
Alignment:
Q  330 tttatcatttttcaccattttccaatactatatttctatttttat 374  Q
    ||||||| ||||||||||||| |||||| ||||||||||| ||||    
T  37230267 tttatcacttttcaccatttttcaatacaatatttctattcttat 37230311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 3e-43; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 43567615 - 43567503
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||| ||||||||||||| |||||    
T  43567615 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatactataattctatttttatctcctta 43567517  T
Q  382 tccaatgccccaag 395  Q
    ||||||||||||||    
T  43567516 tccaatgccccaag 43567503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 282 - 395
Target Start/End: Original strand, 29034687 - 29034799
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  29034687 catgtttgcattagtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttatatttttatcccctta 29034785  T
Q  382 tccaatgccccaag 395  Q
    ||||||||| ||||    
T  29034786 tccaatgcctcaag 29034799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 5240441 - 5240329
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |||    
T  5240441 catgtttgcattggtttcaataacattttgacttttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttctatttttatcccttta 5240343  T
Q  382 tccaatgccccaag 395  Q
    ||||||||| ||||    
T  5240342 tccaatgcctcaag 5240329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 40763253 - 40763361
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 385  Q
    ||||||||||||||||||||||||| |||||||||||| |||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  40763253 tttgcattggtttcaacaacattttaacttttaaaaagttaaa-tttatcacttttcaccatttttcaatgttatatttctatttttatccccttatcca 40763351  T
Q  386 atgccccaag 395  Q
    ||||||||||    
T  40763352 atgccccaag 40763361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 279 - 388
Target Start/End: Original strand, 42222218 - 42222326
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||||||| |||||||||||||| |||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  42222218 taacatgtttgtattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaataccatatttctatttttatcccc 42222316  T
Q  379 ttatccaatg 388  Q
    ||||| ||||    
T  42222317 ttatctaatg 42222326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 283 - 395
Target Start/End: Original strand, 8380442 - 8380553
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| ||||||| |||||| ||||||||||| |||||||| |||||||||||||||||    
T  8380442 atgttttcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcatcattttccaatgctatatttttatttttatccccttat 8380540  T
Q  383 ccaatgccccaag 395  Q
    ||||| |||||||    
T  8380541 ccaataccccaag 8380553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 279 - 388
Target Start/End: Complemental strand, 43958195 - 43958087
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||||||||||||||||||  || ||||||||||||||||| || |||||||||||||||||| |||||| ||||||||||||||||||||||| ||    
T  43958195 taacatgtttgcattggtttcagtaatattttgacttttaaaaa-attaaatttatcatttttcacaattttctaatactatatttctatttttatcgcc 43958097  T
Q  379 ttatccaatg 388  Q
    ||||||||||    
T  43958096 ttatccaatg 43958087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 8292745 - 8292856
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||| |||| ||||||||||||||||||||||||||||  ||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  8292745 catgtttggattgatttcaacaacattttgacttttaaaaaggcaaa-tttataacttttcaccattttccaatgctatatttctatttttatcccctta 8292843  T
Q  382 tccaatgccccaa 394  Q
    |||||||| ||||    
T  8292844 tccaatgctccaa 8292856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 283 - 391
Target Start/End: Complemental strand, 27053601 - 27053494
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||||||||||  || ||||||||||||||||||||| ||||    
T  27053601 atgtttgcattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcaccattttctgatgctatatttctatttttatccctttat 27053503  T
Q  383 ccaatgccc 391  Q
    |||||||||    
T  27053502 ccaatgccc 27053494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 7323062 - 7322958
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||| |||   ||||||||||||||||||| ||||    
T  7323062 catgtttgcattggtttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccatttttcaaggttatatttctatttttatcctctta 7322964  T
Q  382 tccaat 387  Q
    ||||||    
T  7322963 tccaat 7322958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 282 - 391
Target Start/End: Original strand, 22521586 - 22521694
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| || ||| ||||||||||| ||||||||||| |||||||| ||||    
T  22521586 catgtttgcattggtttcaacaacattttgacttttaagaagttaaa-tttatcacttctcatcattttccaatgctatatttctagttttatcctctta 22521684  T
Q  382 tccaatgccc 391  Q
    ||||||||||    
T  22521685 tccaatgccc 22521694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 24359817 - 24359713
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||| ||||||  |||| ||||||||||| | |||||||||||||||||||||||||    
T  24359817 catgtttgcattggtttcaacaacattttaacttttaaaaagttaaa-tttatccctttttaccattttccattgctatatttctatttttatcccctta 24359719  T
Q  382 tccaat 387  Q
    ||||||    
T  24359718 tccaat 24359713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 22707049 - 22707159
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||  |||||||||| |||||||||||||||||| || |||    
T  22707049 catgtttgcattggtttcaacaacatgttaacttttaaaaag-taaaatttatcatttttcattattttccaatgctatatttctatttttat-ccttta 22707146  T
Q  382 tccaatgccccaa 394  Q
    | |||||||||||    
T  22707147 ttcaatgccccaa 22707159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 279 - 394
Target Start/End: Original strand, 49069552 - 49069666
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||||||| |||||||||||||| || |||| |||||||||| || | ||||||| ||||||||||||| ||||||||||||||||||||||||  |    
T  49069552 taacatgtttgtattggtttcaacaatatattgatttttaaaaagttaga-tttatcacttttcaccatttttcaatactatatttctatttttatcttc 49069650  T
Q  379 ttatccaatgccccaa 394  Q
    ||||||||||||||||    
T  49069651 ttatccaatgccccaa 49069666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 279 - 395
Target Start/End: Complemental strand, 30538589 - 30538477
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    |||||||||||||||| ||||||||   |||||| |||||||||| |||| ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  30538589 taacatgtttgcattgatttcaaca---ttttgatttttaaaaagttaaa-tttatcatttttcactattttctaatactatatttctatttttatcccc 30538494  T
Q  379 ttatccaatgccccaag 395  Q
    ||||| |||| ||||||    
T  30538493 ttatctaatgtcccaag 30538477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 41188894 - 41188785
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||| |||||||  ||||||||||||||||| |||||||| ||||||||||| |||||    
T  41188894 atgtttgcattgatttcaacagcattttgacttttaaaaagttaaa-tttatcacctttcaccattttccaatgctatatttatatttttatcctcttat 41188796  T
Q  383 ccaatgcccca 393  Q
    | |||||||||    
T  41188795 caaatgcccca 41188785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 394
Target Start/End: Complemental strand, 40067021 - 40066915
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 385  Q
    |||| |||||||| ||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  40067021 tttgtattggttttaacaacatttt-atttttaaaaagttaaa-tttatcatttttcaccatttttcaatattatatttctatttttatccccttatcca 40066924  T
Q  386 atgccccaa 394  Q
    |||| ||||    
T  40066923 atgcaccaa 40066915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 287 - 386
Target Start/End: Original strand, 3681699 - 3681797
Alignment:
Q  287 ttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaa 386  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||||| ||||||||||||||||||  | ||||| |||||||||||||||||||||    
T  3681699 ttgcattggtttcaacaacattttaacttttaaaaagttaaa-tttatcacttttcaccattttccaatgttgtatttttatttttatccccttatccaa 3681797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 391
Target Start/End: Original strand, 1910244 - 1910351
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||| |||| |||||||||||||||| |||||||||||| |||| |||||||||||||||||||||| |||  ||||||||||||||||| ||||||    
T  1910244 catgtttacatttgtttcaacaacattttaacttttaaaaagttaaa-tttatcatttttcaccattttctaatgttatatttctatttttat-ccctta 1910341  T
Q  382 tccaatgccc 391  Q
    || |||||||    
T  1910342 tcaaatgccc 1910351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 306 - 395
Target Start/End: Complemental strand, 48454907 - 48454819
Alignment:
Q  306 attttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    |||||||||||||||||| |||| ||||||| |||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  48454907 attttgacttttaaaaagttaaa-tttatcacttttcaccatttcccaatgttatatttctatttttatccccttatccaatgccccaag 48454819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 377
Target Start/End: Original strand, 40194826 - 40194920
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccc 377  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||| || |||  |||||||||||| ||||||||||||    
T  40194826 catgtttgcattggtttcaacaacattttgacttttaaaaa-attaaatttatcacttttcatcaatttataatactatatttatatttttatccc 40194920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 395
Target Start/End: Original strand, 36279139 - 36279231
Alignment:
Q  302 caacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    ||||||||||| |||||||||| |||| ||||||| |||||||||||||||||| |||||||| |||||||||||  |||||||||||||||||    
T  36279139 caacattttgatttttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttatatttttatcctattatccaatgccccaag 36279231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 279 - 388
Target Start/End: Complemental strand, 46478667 - 46478560
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    |||||| |||||||| |||||||||| ||||| |||||||||||| |||| ||||||||||| ||| ||||| ||||  |||||||||||||||||||||    
T  46478667 taacatatttgcattagtttcaacaatattttaacttttaaaaagttaaa-tttatcatttt-cactatttttcaatgatatatttctatttttatcccc 46478570  T
Q  379 ttatccaatg 388  Q
    ||||||||||    
T  46478569 ttatccaatg 46478560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 395
Target Start/End: Complemental strand, 8258746 - 8258640
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||||||||||||||||||| ||| ||||| |||||||| | |||||||||| ||||||||||||| ||     ||||||||||||||||||||||||    
T  8258746 atgtttgcattggtttcaacaaaattatgactattaaaaag-ttaaatttatcacttttcaccatttttca-----atatttctatttttatccccttat 8258653  T
Q  383 ccaatgccccaag 395  Q
    || ||||||||||    
T  8258652 ccgatgccccaag 8258640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 282 - 391
Target Start/End: Complemental strand, 5348078 - 5347973
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||   ||||||||||||||||| |||| ||||||| |||||| |||||||||||  ||||||||||||| ||| ||||||    
T  5348078 catgtttgcattggtttcaaca---ttttgacttttaaaaagttaaa-tttatcacttttcatcattttccaatgttatatttctatttatattccctta 5347983  T
Q  382 tccaatgccc 391  Q
    | ||||||||    
T  5347982 ttcaatgccc 5347973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 283 - 374
Target Start/End: Original strand, 46042749 - 46042838
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttat 374  Q
    ||||||||||||||||||||||||||| |||||| |||||| | |||||||| | ||||||||||||| |||||||||||||||||||||||    
T  46042749 atgtttgcattggtttcaacaacatttagactttaaaaaag-ttaaatttataacttttcaccatttt-caatactatatttctatttttat 46042838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 285 - 382
Target Start/End: Complemental strand, 31626147 - 31626051
Alignment:
Q  285 gtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||||||||||||||||||||||||| |||||||||| | |||||||||| |||||| ||||||  |||| ||||||| |||||||||| ||||||    
T  31626147 gtttgcattggtttcaacaacattttgatttttaaaaag-ttaaatttatcacttttcatcattttttaatattatatttttatttttatctccttat 31626051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 286 - 372
Target Start/End: Original strand, 42291284 - 42291371
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcacca-ttttccaatactatatttctattttt 372  Q
    |||||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||||| | ||||||||||| ||||||||||||||    
T  42291284 tttgcattggattcaacaatattttaacttttaaaaaaataaaatttattatttttcactatttttccaatacaatatttctattttt 42291371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 29687476 - 29687547
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaa 354  Q
    ||||||||||||||||||||||||||||| |||||||||||| | ||||| |||| |||||||||||||||||    
T  29687476 catgtttgcattggtttcaacaacattttaacttttaaaaag-ttaaattcatcacttttcaccattttccaa 29687547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 388
Target Start/End: Complemental strand, 1907697 - 1907593
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    ||||||||||||  |||||||| ||||||| | ||||||| || ||||| || |||||| |||||||| |||||| |||||||| |||||||||  ||||    
T  1907697 atgtttgcattgcattcaacaatattttgattattaaaaa-attaaattcattattttttaccatttttcaatacaatatttctctttttatccttttat 1907599  T
Q  383 ccaatg 388  Q
    ||||||    
T  1907598 ccaatg 1907593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 359
Target Start/End: Complemental strand, 30388760 - 30388693
Alignment:
Q  291 attggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatacta 359  Q
    |||| |||||| || |||||||||||||||||| |||| ||||||||||||||||||||| ||||||||    
T  30388760 attgatttcaataatattttgacttttaaaaagttaaa-tttatcatttttcaccatttttcaatacta 30388693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 375
Target Start/End: Complemental strand, 31360357 - 31360309
Alignment:
Q  327 aaatttatcatttttcaccattttccaatactatatttctatttttatc 375  Q
    |||||||||| |||| ||||||| ||||||| |||||||||||||||||    
T  31360357 aaatttatcactttttaccatttcccaatacaatatttctatttttatc 31360309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 355
Target Start/End: Original strand, 6548533 - 6548602
Alignment:
Q  285 gtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaat 355  Q
    ||||||||||| | |||||| ||||| |||||||||||| | ||||| ||||||||||||| ||| |||||    
T  6548533 gtttgcattggatccaacaatattttaacttttaaaaag-ttaaattcatcatttttcaccgtttcccaat 6548602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 312
Target Start/End: Original strand, 29959068 - 29959097
Alignment:
Q  283 atgtttgcattggtttcaacaacattttga 312  Q
    ||||||||||||||||||||||||||||||    
T  29959068 atgtttgcattggtttcaacaacattttga 29959097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 371
Target Start/End: Original strand, 32204186 - 32204270
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttt 371  Q
    |||||||||  ||||| || ||||| |||||||||||| |||| || |||| |||||| |||||| |||| | |||||||||||||    
T  32204186 tttgcattgtattcaaaaatattttaacttttaaaaagttaaa-ttcatcacttttcatcatttttcaatgcaatatttctatttt 32204270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 37869429 - 37869384
Alignment:
Q  327 aaatttatcatttttcaccattttccaatactatatttctattttt 372  Q
    |||| |||||||||||| ||||||||||||| |||||| |||||||    
T  37869429 aaatatatcatttttcatcattttccaatacaatatttttattttt 37869384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 375
Target Start/End: Complemental strand, 42552579 - 42552489
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 375  Q
    ||||||||||||  || ||||| |||||||||||||||||| |  |||| || |||||| || ||||| ||| || |||||| ||||||||||    
T  42552579 atgtttgcattgaatttaacaatattttgacttttaaaaagtt--aattcattattttttactatttttcaacacaatatttttatttttatc 42552489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 375
Target Start/End: Complemental strand, 3720198 - 3720131
Alignment:
Q  307 ttttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 375  Q
    |||| |||||||||||| |||| ||||||||||| ||||||||  |||| | ||||| |||||||||||    
T  3720198 ttttaacttttaaaaagttaaa-tttatcattttacaccatttgtcaatgcaatattactatttttatc 3720131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 282 - 390
Target Start/End: Complemental strand, 36730262 - 36730155
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||    
T  36730262 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttatatttttatcccctta 36730164  T
Q  382 tccaatgcc 390  Q
    |||||||||    
T  36730163 tccaatgcc 36730155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 279 - 394
Target Start/End: Complemental strand, 4759962 - 4759848
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| |||| |||||||||||||||||||||     
T  4759962 taacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccatttttcaatgctatatttctatttttatccct 4759864  T
Q  379 ttatccaatgccccaa 394  Q
    ||||||||||| ||||    
T  4759863 ttatccaatgctccaa 4759848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 282 - 391
Target Start/End: Complemental strand, 8715610 - 8715503
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||||||||||||||||| |||||||    
T  8715610 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcacttttcaccattttccaatgctatatttctattttta-cccctta 8715513  T
Q  382 tccaatgccc 391  Q
    ||||||||||    
T  8715512 tccaatgccc 8715503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 282 - 391
Target Start/End: Complemental strand, 9067497 - 9067390
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||||||||||||||||| |||||||    
T  9067497 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcacttttcaccattttccaatgctatatttctattttta-cccctta 9067400  T
Q  382 tccaatgccc 391  Q
    ||||||||||    
T  9067399 tccaatgccc 9067390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 283 - 395
Target Start/End: Complemental strand, 29915683 - 29915572
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||||||||||||||||| |||||||||||||||||||| |||| ||||| |||||| |||||||||||||||||||||| |||||||||||||||||    
T  29915683 atgtttgcattggtttcaaccacattttgacttttaaaaagttaaa-tttataattttttaccattttccaatactatatttttatttttatccccttat 29915585  T
Q  383 ccaatgccccaag 395  Q
    |||| ||||||||    
T  29915584 ccaacgccccaag 29915572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 283 - 395
Target Start/End: Complemental strand, 29964836 - 29964725
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||||||||||||||||| |||||||||||||||||||| |||| ||||| |||||| |||||||||||||||||||||| |||||||||||||||||    
T  29964836 atgtttgcattggtttcaaccacattttgacttttaaaaagttaaa-tttataattttttaccattttccaatactatatttttatttttatccccttat 29964738  T
Q  383 ccaatgccccaag 395  Q
    |||| ||||||||    
T  29964737 ccaacgccccaag 29964725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 279 - 388
Target Start/End: Original strand, 46317483 - 46317591
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||  ||||||||||||||||||  |    
T  46317483 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcatttttcatcattttccaatgttatatttctatttttatctac 46317581  T
Q  379 ttatccaatg 388  Q
    ||||||||||    
T  46317582 ttatccaatg 46317591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 279 - 395
Target Start/End: Original strand, 32415566 - 32415681
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| | ||||||| ||||| |||| |||||||||||||||||||||     
T  32415566 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatgacttttcacaatttttcaatgctatatttctatttttatccct 32415664  T
Q  379 ttatccaatgccccaag 395  Q
    |||||||||||| ||||    
T  32415665 ttatccaatgcctcaag 32415681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 279 - 394
Target Start/End: Complemental strand, 44695783 - 44695669
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    |||||||||||||||| ||||||||||||||| | |||||||||| |||| ||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  44695783 taacatgtttgcattgatttcaacaacattttaatttttaaaaagttaaa-tttatcatttttcaccattttccaagattatatttatatttttatcccc 44695685  T
Q  379 ttatccaatgccccaa 394  Q
    |||||||||| |||||    
T  44695684 ttatccaatgtcccaa 44695669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 279 - 394
Target Start/End: Original strand, 37509108 - 37509222
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| |||||||||| ||  ||||| ||||||||||||    
T  37509108 taacatatttgcattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcactattttccaatgctgcatttcaatttttatcccc 37509206  T
Q  379 ttatccaatgccccaa 394  Q
    ||||||||||||||||    
T  37509207 ttatccaatgccccaa 37509222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 282 - 383
Target Start/End: Complemental strand, 12905391 - 12905292
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  12905391 catgtttgcattggtttcaacaacattttgacttttaaaatg-ttaaatttatcatttttcaccatttt-caatgttatatttctatttttatcccctta 12905294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 44570495 - 44570383
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| || |||| ||||||||||||||||||  |||||||||||||| ||||| |||    
T  44570495 catgtttgcattgatttcaacaacattttgacttttaaaaagttaaagtt-atcacttttcaccattttccaatgttatatttctattttgatcccttta 44570397  T
Q  382 tccaatgccccaag 395  Q
    || |||||||||||    
T  44570396 tcgaatgccccaag 44570383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 282 - 395
Target Start/End: Original strand, 10854859 - 10854975
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttt----atccc 377  Q
    ||||||||||||||||||||||||||||| |||||||||||| | |||||||| | |||||||||||||||||| ||||||||||| ||||    |||||    
T  10854859 catgtttgcattggtttcaacaacattttaacttttaaaaag-ttaaatttattagttttcaccattttccaatgctatatttctacttttatccatccc 10854957  T
Q  378 cttatccaatgccccaag 395  Q
    ||||||||||||||||||    
T  10854958 cttatccaatgccccaag 10854975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 373
Target Start/End: Original strand, 52570783 - 52570872
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttta 373  Q
    |||||||||||||||||||||| |||||||||||||||||| || | ||||||| ||||||||||||||||||||||||||||||||||||    
T  52570783 atgtttgcattggtttcaacaatattttgacttttaaaaagttata-tttatcacttttcaccattttccaatactatatttctattttta 52570872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 35306332 - 35306436
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||| |||||| |||||||| |||||||||||| |||| ||||||| |||||| |||||||||||  ||||||||||||||||||||||||    
T  35306332 catgtttgcattgatttcaataacattttaacttttaaaaagttaaa-tttatcacttttcatcattttccaatgttatatttctatttttatcccctta 35306430  T
Q  382 tccaat 387  Q
    ||||||    
T  35306431 tccaat 35306436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 282 - 391
Target Start/End: Complemental strand, 51817421 - 51817313
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||| ||| |||||||||| |||||||||||||||||| |||| ||||||| |||||||||||||||||| |||||||| ||||||||||| ||||    
T  51817421 catgtttgtattagtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttttatttttatcctctta 51817323  T
Q  382 tccaatgccc 391  Q
    | ||||||||    
T  51817322 ttcaatgccc 51817313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 8847561 - 8847449
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||| ||||| ||||||||| ||||| |||||||||||| |||| || |||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  8847561 catgtttacattgttttcaacaatattttaacttttaaaaagttaaa-ttaatcactttttaccattttccaatgttatatttctatttttatcccctta 8847463  T
Q  382 tccaatgccccaag 395  Q
    ||||||| ||||||    
T  8847462 tccaatgtcccaag 8847449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 12051038 - 12051142
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||| ||||||||||||||| | |||||||||| |||| ||||||||||||||  ||||| |||||||||||||||||||||||  |||||    
T  12051038 catgtttgcattgttttcaacaacattttaatttttaaaaagttaaa-tttatcatttttcattattttacaatactatatttctatttttatttcctta 12051136  T
Q  382 tccaat 387  Q
    ||||||    
T  12051137 tccaat 12051142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 25102426 - 25102319
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 385  Q
    ||||||||||||||||||| ||||| ||||| |||||  |||  ||||||| |||| ||||||||||||| ||||||||||||||||||| | |||||||    
T  25102426 tttgcattggtttcaacaatattttaactttaaaaaaattaa--tttatcactttttaccattttccaatgctatatttctatttttatctcattatcca 25102329  T
Q  386 atgccccaag 395  Q
    ||| ||||||    
T  25102328 atgtcccaag 25102319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 395
Target Start/End: Original strand, 1803932 - 1804000
Alignment:
Q  327 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    ||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  1803932 aaatttatcattttttaccctttttcaataatatatttctatttttatccccttatccaatgccccaag 1804000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 395
Target Start/End: Complemental strand, 45899652 - 45899540
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatca-tttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||| |||||  |||||||| |||||||||||||||||  |||| || |||| ||||||| ||||||||||||  |||||||||||||||| | ||||    
T  45899652 atgtttacattgaattcaacaatattttgacttttaaaaatttaaa-ttcatcactttttcatcattttccaatataatatttctatttttattctctta 45899554  T
Q  382 tccaatgccccaag 395  Q
    ||||||||||||||    
T  45899553 tccaatgccccaag 45899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 367
Target Start/End: Complemental strand, 20227492 - 20227405
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttcta 367  Q
    ||||||||||| ||||||||||| |||||||| |||||||| ||| | |||||||||| |||||| |||||| |||| |||||||||||    
T  20227492 taacatgtttgtattggtttcaataacattttaacttttaagaag-ttaaatttatcacttttcatcatttttcaatgctatatttcta 20227405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 391
Target Start/End: Complemental strand, 18888 - 18788
Alignment:
Q  290 cattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 389  Q
    |||||| |||||||| ||||| | |||||||||| |||| || |||| |||||||| ||| ||||| | |||||||||||||||||| |||| |||||||    
T  18888 cattggattcaacaatattttaatttttaaaaagttaaa-ttcatcacttttcaccgtttcccaatgcaatatttctatttttatcctcttaaccaatgc 18790  T
Q  390 cc 391  Q
    ||    
T  18789 cc 18788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 343
Target Start/End: Original strand, 31647304 - 31647364
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttca 343  Q
    ||||||||||||| |||||| ||||||||||||||||||||| | |||||||||||||||||    
T  31647304 catgtttgcattgatttcaataacattttgacttttaaaaag-ttaaatttatcatttttca 31647364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 372
Target Start/End: Complemental strand, 34060873 - 34060786
Alignment:
Q  284 tgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttt 372  Q
    |||||||||||  |||||||| ||||| |||||||||||| |||| || |||| ||||||||||||| |||||| |||||| |||||||    
T  34060873 tgtttgcattgaattcaacaatattttaacttttaaaaagttaaa-ttcatcacttttcaccatttttcaatacaatatttttattttt 34060786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 395
Target Start/End: Original strand, 41346346 - 41346386
Alignment:
Q  355 tactatatttctatttttatccccttatccaatgccccaag 395  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  41346346 tactatatttctatttttatccccttatccaatgccccaag 41346386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 339 - 395
Target Start/End: Complemental strand, 48136776 - 48136720
Alignment:
Q  339 tttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||||| |||||||    
T  48136776 tttcacaattttccaatgctatatttctatttttattcccttatccaataccccaag 48136720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 284 - 358
Target Start/End: Original strand, 41345977 - 41346050
Alignment:
Q  284 tgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatact 358  Q
    ||||||||||||||||||||| ||||| ||||||||||| || |||||||| | ||||||| ||||| |||||||    
T  41345977 tgtttgcattggtttcaacaatattttaacttttaaaaa-attaaatttattacttttcactatttttcaatact 41346050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 377
Target Start/End: Original strand, 11675320 - 11675405
Alignment:
Q  289 gcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccc 377  Q
    ||||||| |||||||| |||||||| ||||||||| |||| ||  |||||||  |||||||| |||||| |||||||||||||||||||    
T  11675320 gcattggattcaacaatattttgacatttaaaaagttaaa-ttcgtcatttt--accatttttcaatacaatatttctatttttatccc 11675405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 39436493 - 39436563
Alignment:
Q  310 tgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||| |||| | | | ||||||||||||||| |||||| |||||||||||||||||| ||||    
T  39436493 tgacttttaaaaagttaaattcttt-atttttcaccatttttcaatacaatatttctatttttatcctctta 39436563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 19029 - 18946
Alignment:
Q  290 cattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttat 374  Q
    |||||| |||||||| ||||| | |||||||||| |||| || |||| |||||||| ||| ||||| | ||||||||||||||||    
T  19029 cattggattcaacaatattttaatttttaaaaagttaaa-ttcatcacttttcaccgtttcccaatgcaatatttctatttttat 18946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 49976232 - 49976157
Alignment:
Q  300 aacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcc 376  Q
    ||||| |||||||||||||||||| |||| || |||| |||||||||||   |||||| ||| ||||||||||||||    
T  49976232 aacaatattttgacttttaaaaagttaaa-ttcatcacttttcaccattagtcaatacaataattctatttttatcc 49976157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 365
Target Start/End: Original strand, 11316970 - 11317048
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttc 365  Q
    |||||||| | ||||| || |||||||||||||||||| | ||||| || | ||||||||||||||||| || |||||||    
T  11316970 tttgcattagattcaataatattttgacttttaaaaag-ttaaattcataacttttcaccattttccaaaacaatatttc 11317048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 394
Target Start/End: Complemental strand, 12060153 - 12060057
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaa 394  Q
    ||||||||  |||| |||||||||||  | |||| ||||| |||||| ||||||||||||| |||||||||  ||| ||| |||| ||||| ||||||    
T  12060153 ttcaacaattttttaacttttaaaaac-tcaaatctatcacttttcatcattttccaatacaatatttctaaatttgtcctcttaaccaataccccaa 12060057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 405
Target Start/End: Complemental strand, 44019172 - 44019107
Alignment:
Q  340 ttcaccattttccaatactatatttctatttttatccccttatccaatgccccaagcattcacctt 405  Q
    |||||||||||  |||  ||||||| ||||||||||||||||| |||||| ||||| |||| ||||    
T  44019172 ttcaccattttttaatgatatatttatatttttatccccttattcaatgctccaaggattctcctt 44019107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 394
Target Start/End: Complemental strand, 48313932 - 48313836
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaa 394  Q
    ||||||||  |||||| |||||||||| | |||||| ||  |||||||||||| ||||||| || |||||||||||||   ||||  |||||||||||    
T  48313932 ttcaacaatgttttgatttttaaaaag-tcaaatttttcgcttttcaccatttcccaatacaatgtttctatttttatgatcttaatcaatgccccaa 48313836  T

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Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 371
Target Start/End: Original strand, 21324521 - 21324603
Alignment:
Q  287 ttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttt 371  Q
    |||||| || |||||||| ||||| |||||||||||| | |||| ||||| |||||| || |||||||| | |||||||||||||    
T  21324521 ttgcatcggattcaacaatattttaacttttaaaaag-ttaaatctatcacttttcatca-tttccaatgcaatatttctatttt 21324603  T

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Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 19389419 - 19389307
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||| ||||||| | |||||||||||||||||| |||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  19389419 catgtttgcattgttttcaacgatattttgacttttaaaaagttaaa-tttatcacttttcacaattttccaatactatatttctatttttatcccctta 19389321  T
Q  382 tccaatgccccaag 395  Q
    ||||||||||||||    
T  19389320 tccaatgccccaag 19389307  T

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Target: chr8; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 21016234 - 21016345
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| | ||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  21016234 catgtttgcattggcttcaacaacattttgacttttaaaaagttaaa-tctatcacttttcaccatttttcaatattatatttctatttttatcccctta 21016332  T
Q  382 tccaatgccccaa 394  Q
    ||||| |||||||    
T  21016333 tccaaagccccaa 21016345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 282 - 388
Target Start/End: Complemental strand, 25249450 - 25249345
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| ||||||| |||||||||||||||||| |||||||| |||||||| |||||||    
T  25249450 catgtttgcattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttttatttttaccccctta 25249352  T
Q  382 tccaatg 388  Q
    |||||||    
T  25249351 tccaatg 25249345  T

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Target: chr8; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 283 - 383
Target Start/End: Original strand, 18068963 - 18069062
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    ||||||||||| ||||||||||||||||||| ||||||||| |||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  18068963 atgtttgcattagtttcaacaacattttgacctttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttctatttttatccccttat 18069061  T

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Target: chr8; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 283 - 391
Target Start/End: Original strand, 45338005 - 45338112
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||||||||||| |||| |||||||||| |||||||||| |||| ||||||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  45338005 atgtttgcattggtctcaataacattttgatttttaaaaagttaaa-tttatcatttttcaccatttttcaatgttatatttctatttttatccccttat 45338103  T
Q  383 ccaatgccc 391  Q
    |||||||||    
T  45338104 ccaatgccc 45338112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 279 - 393
Target Start/End: Original strand, 6939155 - 6939268
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| || |||||||||| ||||  |||||||||||||||||| |     
T  6939155 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcacttgtcaccatttttcaatgttatatttctatttttatctca 6939253  T
Q  379 ttatccaatgcccca 393  Q
    |||| ||||||||||    
T  6939254 ttattcaatgcccca 6939268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 286 - 388
Target Start/End: Original strand, 8018765 - 8018866
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 385  Q
    |||||||| |||| ||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8018765 tttgcattagttttaacaacattttgatttttaaaaagttaaa-tttatcacttttcaccattttccaatattatatttctatttttatccccttatcca 8018863  T
Q  386 atg 388  Q
    |||    
T  8018864 atg 8018866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 282 - 389
Target Start/End: Original strand, 4989936 - 4990039
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||   ||||||| ||||||||| |||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  4989936 catgtttgcattggtttcaaca---ttttgacatttaaaaagttaaa-tttatcatttttcactattttccaatgctatatttctatttttatcccctta 4990031  T
Q  382 tccaatgc 389  Q
    ||||||||    
T  4990032 tccaatgc 4990039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 282 - 386
Target Start/End: Complemental strand, 21016166 - 21016063
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||||| ||||||||||||||||||||||||||| | |||| ||||| |||| |||||||| ||||  ||||||||||||||||||||||||    
T  21016166 catgtttgcattggcttcaacaacattttgacttttaaaaag-ttaaatctatcacttttaaccatttttcaatgttatatttctatttttatcccctta 21016068  T
Q  382 tccaa 386  Q
    |||||    
T  21016067 tccaa 21016063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 282 - 382
Target Start/End: Complemental strand, 26195482 - 26195383
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||| |||||||||||||||||||| |||||||||||| |||| ||||||| ||||||| ||||||||||  ||||||||||||||||||||||||    
T  26195482 catgtttgtattggtttcaacaacattttaacttttaaaaagttaaa-tttatcacttttcacaattttccaatgttatatttctatttttatcccctta 26195384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 291 - 387
Target Start/End: Original strand, 26672799 - 26672894
Alignment:
Q  291 attggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaat 387  Q
    |||||||||||||||||||||||||||||||| || ||||||||| ||||| | ||||||||||| ||||||||||||||||||||| |||||||||    
T  26672799 attggtttcaacaacattttgacttttaaaaa-attaaatttatccttttttatcattttccaatgctatatttctatttttatccctttatccaat 26672894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 387
Target Start/End: Original strand, 10694811 - 10694911
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 385  Q
    ||||||||| |||||||||||||||||||||||||||| |||| ||||||| |||| ||||||||  |||||||||||| |||||| |||||||||||||    
T  10694811 tttgcattgatttcaacaacattttgacttttaaaaagttaaa-tttatcactttttaccatttttaaatactatatttttattttaatccccttatcca 10694909  T
Q  386 at 387  Q
    ||    
T  10694910 at 10694911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 282 - 391
Target Start/End: Original strand, 3174456 - 3174568
Alignment:
Q  282 catgtttgcattggtttcaacaacattt----tgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccc 377  Q
    |||||||| |||||||||||||||||||    |||||||||||||| | |||||||| |||||||||||||||||||||  |||||||||||||||||||    
T  3174456 catgtttgtattggtttcaacaacatttattttgacttttaaaaag-tcaaatttataatttttcaccattttccaatataatatttctatttttatccc 3174554  T
Q  378 cttatccaatgccc 391  Q
    || |||||| ||||    
T  3174555 ctcatccaacgccc 3174568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 34714030 - 34713924
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatac--tatatttctatttttatcccct 379  Q
    |||||||||||||||||||||||||||||||||||||| ||| | |||||||||| ||| ||||||||| ||||||  ||||| ||||||||||||||||    
T  34714030 catgtttgcattggtttcaacaacattttgacttttaagaag-tgaaatttatcactttgcaccatttttcaatactatatatatctatttttatcccct 34713932  T
Q  380 tatccaat 387  Q
    ||| ||||    
T  34713931 tattcaat 34713924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 282 - 382
Target Start/End: Complemental strand, 14855493 - 14855394
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||| |||| ||||||||||| |||||||||| | |||| ||||||  ||||||| |||||  |||||||||||||||||||||||||||||    
T  14855493 catgtttgcattagttttaacaacattttaacttttaaaatgttaaa-tttatctcttttcactattttttaatactatatttctatttttatcccctta 14855395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 37433267 - 37433369
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||||||||||||||||||||||||| ||||| |||||| |||| ||||||| |||||| |||||| ||||  ||||| || ||||||||||||||||    
T  37433267 atgtttgcattggtttcaacaacattttaacttt-aaaaagttaaa-tttatcacttttcatcatttttcaatgttatatgtcgatttttatccccttat 37433364  T
Q  383 ccaat 387  Q
    |||||    
T  37433365 ccaat 37433369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 389
Target Start/End: Complemental strand, 5129545 - 5129459
Alignment:
Q  302 caacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 389  Q
    ||||||||||||||||||||| || |||||||||| |||||| |||||| |||| ||||||||| ||||||||||||||||| |||||    
T  5129545 caacattttgacttttaaaaa-attaaatttatcacttttcatcatttttcaatgctatatttcaatttttatccccttatcaaatgc 5129459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 7532829 - 7532893
Alignment:
Q  327 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccc 391  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  7532829 aaattcatcacttttcaccattttccaatacaatatttctatttttatccccttaaccaatgccc 7532893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 300 - 375
Target Start/End: Complemental strand, 31596512 - 31596438
Alignment:
Q  300 aacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 375  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||||||||||  || || |||||||||||||||||    
T  31596512 aacaatattttgacttttaaaaag-taaaattcatcatttttcaccattttttaacacaatatttctatttttatc 31596438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 381
Target Start/End: Original strand, 26892799 - 26892884
Alignment:
Q  295 gtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||| || ||||| |||||||||||| |||| |||||||||||| || ||||| ||||| ||||||||||||||||||| ||||    
T  26892799 gtttcaataatattttaacttttaaaaagttaaa-tttatcattttttacaatttttcaatattatatttctatttttatcctctta 26892884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 44874369 - 44874431
Alignment:
Q  327 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 389  Q
    |||||||||| ||||||||||||| ||||  ||||||| ||||||||||||||||||||||||    
T  44874369 aaatttatcacttttcaccatttttcaatgttatatttatatttttatccccttatccaatgc 44874431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 395
Target Start/End: Original strand, 35930168 - 35930248
Alignment:
Q  314 ttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    |||||||||| |||| ||||| |||||||| |||||| ||||||||||||| ||||||||||  |||||||||||| |||||    
T  35930168 ttttaaaaagttaaa-tttattatttttcatcatttttcaatactatatttttatttttatcttcttatccaatgctccaag 35930248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 6433548 - 6433635
Alignment:
Q  286 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttat 374  Q
    ||||||||||||| ||||| ||||| |||||||||||| | |||||||| | |||| |||||||| |||| |||||||| |||||||||    
T  6433548 tttgcattggttttaacaatattttaacttttaaaaag-ttaaatttataactttttaccatttttcaatgctatatttttatttttat 6433635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 33741586 - 33741523
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttca 343  Q
    |||||| ||||||||||||||||||| ||||| |||||||||||| | |||||||||||||||||    
T  33741586 taacatatttgcattggtttcaacaatattttaacttttaaaaag-ttaaatttatcatttttca 33741523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 25636780 - 25636694
Alignment:
Q  300 aacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatg 388  Q
    ||||| ||||||||||| ||||| |||||||| |||||||||  | |||||  ||||| |||||||||||||||||| |||||||||||    
T  25636780 aacaatattttgactttaaaaaa-ataaaattaatcatttttttctattttt-aatacaatatttctatttttatcctcttatccaatg 25636694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 371
Target Start/End: Complemental strand, 25690929 - 25690855
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttt 371  Q
    ||||| || ||||||||||||||||| |||||||| |||||||||| | |||||  ||||  |||||||||||||    
T  25690929 ttcaaaaatattttgacttttaaaaaaataaaattaatcatttttctctattttttaatatgatatttctatttt 25690855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 297 - 390
Target Start/End: Complemental strand, 11332888 - 11332796
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgcc 390  Q
    ||||||||  ||||||||||||||||| |||| | | ||| ||| ||||||||  |||||| |||||||||||||||||  |||| ||||||||    
T  11332888 ttcaacaatgttttgacttttaaaaagttaaattct-tcactttacaccatttctcaatacaatatttctatttttatcttcttaaccaatgcc 11332796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 394
Target Start/End: Complemental strand, 19976545 - 19976488
Alignment:
Q  338 ttttcaccattttccaatactatatttctatttttatccc-cttatccaatgccccaa 394  Q
    ||||||||||||| ||||| |||||||||| ||||||||| ||||||||| |||||||    
T  19976545 ttttcaccatttttcaatattatatttctacttttatcccacttatccaaagccccaa 19976488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 375
Target Start/End: Complemental strand, 34421412 - 34421335
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 375  Q
    ||||||||  |||||| |||||||||| | || ||| |||||||||||||||| | ||||| || ||||||||||||||    
T  34421412 ttcaacaatgttttgatttttaaaaagttgaatttt-tcatttttcaccatttccaaatacaatgtttctatttttatc 34421335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 328
Target Start/End: Original strand, 30351592 - 30351637
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaa 328  Q
    ||||||||||||| |||||||| ||||| |||||||||||| ||||    
T  30351592 atgtttgcattggattcaacaatattttaacttttaaaaagttaaa 30351637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 6841755 - 6841707
Alignment:
Q  333 atcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||| |||||| ||||||| ||||| |||||||||||||||||| ||||    
T  6841755 atcacttttcatcattttctaatacaatatttctatttttatcctctta 6841707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 367
Target Start/End: Complemental strand, 39972260 - 39972177
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttcta 367  Q
    ||||||||||||  || |||||  |||| |||||||||||| | ||||| |||| |||||||||||| ||||||| | |||||||    
T  39972260 atgtttgcattgaattgaacaattttttaacttttaaaaag-tcaaattcatcacttttcaccatttcccaatacaacatttcta 39972177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 319
Target Start/End: Original strand, 41689098 - 41689126
Alignment:
Q  291 attggtttcaacaacattttgacttttaa 319  Q
    |||||||||||||||||||||||||||||    
T  41689098 attggtttcaacaacattttgacttttaa 41689126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 6866915 - 6867026
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||| |||||||||||||||||||||||||| | |||| ||||||| |||||||||||||| ||| |||||||| ||||||||||||||||    
T  6866915 catgtttgcattgatttcaacaacattttgacttttaaaaggttaaa-tttatcacttttcaccattttcaaatgctatatttttatttttatcccctta 6867013  T
Q  382 tccaatgccccaa 394  Q
    |||||||||||||    
T  6867014 tccaatgccccaa 6867026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 12191493 - 12191604
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||| |||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||| ||||| |||||||||||||||||||| ||||    
T  12191493 catgtttgtattgatttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccatttaccaatgctatatttctatttttatccactta 12191591  T
Q  382 tccaatgccccaa 394  Q
    |||||||| ||||    
T  12191592 tccaatgcgccaa 12191604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 293 - 395
Target Start/End: Original strand, 10855443 - 10855544
Alignment:
Q  293 tggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgcccc 392  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| |||||| |||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  10855443 tggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcatcatttttcaatattatatttctatttttatccccttatcaaatgcccc 10855541  T
Q  393 aag 395  Q
    |||    
T  10855542 aag 10855544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 395
Target Start/End: Original strand, 5578274 - 5578386
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    |||||||||||| |||||||||| |||||||||||||||||| |||| ||||||| || |||  ||||| |||| ||||||||||||||||||||||| |    
T  5578274 catgtttgcatttgtttcaacaatattttgacttttaaaaagttaaa-tttatcaattctcattatttttcaatgctatatttctatttttatcccctca 5578372  T
Q  382 tccaatgccccaag 395  Q
    ||||||||| ||||    
T  5578373 tccaatgcctcaag 5578386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 7875290 - 7875201
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttt 372  Q
    ||||| ||||||||||||||||| |||||||||||||||||| | |||||||||| |||||| ||||||||||| ||||||||||||||||    
T  7875290 catgtctgcattggtttcaacaatattttgacttttaaaaag-ttaaatttatcacttttcatcattttccaatgctatatttctattttt 7875201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 305 - 395
Target Start/End: Complemental strand, 29692427 - 29692338
Alignment:
Q  305 cattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    |||||||||| |||||||| |||| ||||||| ||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||    
T  29692427 cattttgactcttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttctatttttatccatttatccaatgccccaag 29692338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 279 - 395
Target Start/End: Complemental strand, 8324216 - 8324101
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||||||  |||||||||||||||||||| | |||||||||| |||| ||||||||||||||| ||||  |||| |||| ||||||||||||||  |    
T  8324216 taacatgtttatattggtttcaacaacattttaatttttaaaaagttaaa-tttatcatttttcacaatttctcaatgctatgtttctatttttatcttc 8324118  T
Q  379 ttatccaatgccccaag 395  Q
    |||| ||||||||||||    
T  8324117 ttattcaatgccccaag 8324101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 26572186 - 26572079
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||| ||||| ||||| ||||||||||  || |||||||||| |||| | ||||||||     ||||||||||||||||||||||||    
T  26572186 catgtttgcattggttttaacaatattttaacttttaaaat-attaaatttatcactttttatcattttcc-----tatatttctatttttatcccctta 26572093  T
Q  382 tccaatgccccaag 395  Q
    ||||||||||||||    
T  26572092 tccaatgccccaag 26572079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 282 - 390
Target Start/End: Complemental strand, 16437691 - 16437592
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||| ||||| |||||||||||| ||||         ||||||||||||||||||  ||||||||||||||||||| ||||    
T  16437691 catgtttgcattggtttcaacaatatttttacttttaaaaagttaaa---------ttttcaccattttccaatgttatatttctatttttatccactta 16437601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 394
Target Start/End: Complemental strand, 7274326 - 7274212
Alignment:
Q  279 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 378  Q
    ||||||||||| |||| ||||||||||||||| |||||||||| | |||| ||||||| |||||  |||||||||||  ||||||||||| ||||| |||    
T  7274326 taacatgtttgtattgatttcaacaacattttaacttttaaaatgttaaa-tttatcacttttcgtcattttccaatgttatatttctatatttattccc 7274228  T
Q  379 ttatccaatgccccaa 394  Q
    || ||||||| |||||    
T  7274227 ttgtccaatgtcccaa 7274212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 28014638 - 28014743
Alignment:
Q  285 gtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcc 384  Q
    ||||||||||| |||||||| ||||| |||||||||||| | ||| | ||||||||||||||||| ||||||| ||||||||| ||||| || |||| ||    
T  28014638 gtttgcattggattcaacaatattttaacttttaaaaag-tcaaactcatcatttttcaccatttcccaatacaatatttctaattttaccctcttaacc 28014736  T
Q  385 aatgccc 391  Q
    |||||||    
T  28014737 aatgccc 28014743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 7880536 - 7880447
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttt 372  Q
    ||||| || ||| |||||||||| |||||||||||||||||| |||| ||||||| |||||| ||||||| ||| ||||||||||||||||    
T  7880536 catgtctgtattagtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcatcattttctaatgctatatttctattttt 7880447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 32786069 - 32786113
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagata 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  32786069 catgtttgcattggtttcaacaacattttgacttttaaaaagata 32786113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 375
Target Start/End: Complemental strand, 27127601 - 27127524
Alignment:
Q  297 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 375  Q
    |||||||| || ||||||||||||||| |||| || |||||||||||||||||  |||||| |||||||||||||||||    
T  27127601 ttcaacaatatcttgacttttaaaaagttaaa-ttcatcatttttcaccatttctcaatacaatatttctatttttatc 27127524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 376
Target Start/End: Original strand, 12175561 - 12175652
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcc 376  Q
    |||||||||||||||| || ||| |||| |||||||||||| |||| ||||||| |||| | |||||| ||||||||||||| |||||||||||    
T  12175561 atgtttgcattggttttaataac-ttttaacttttaaaaagttaaa-tttatcagtttttatcatttttcaatactatatttatatttttatcc 12175652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 395
Target Start/End: Original strand, 32786260 - 32786327
Alignment:
Q  327 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 395  Q
    |||||||||  ||||||||||||||||||  ||||||||||||||||| |||||||||||| |||||||    
T  32786260 aaatttatctcttttcaccattttccaatgttatatttctatttttat-cccttatccaataccccaag 32786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 394
Target Start/End: Complemental strand, 31220435 - 31220325
Alignment:
Q  283 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 382  Q
    |||||||||||   ||||| |||||||| |||||||||||| |||| || |||| |||| |||||||| ||| || ||||||| ||||  |||| |||||    
T  31220435 atgtttgcattttattcaataacattttaacttttaaaaagttaaa-ttcatcactttttaccatttttcaaaacgatatttccatttccatcctcttat 31220337  T
Q  383 ccaatgccccaa 394  Q
    ||||||||||||    
T  31220336 ccaatgccccaa 31220325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 373
Target Start/End: Original strand, 12769254 - 12769294
Alignment:
Q  333 atcatttttcaccattttccaatactatatttctattttta 373  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  12769254 atcatttttcaccatttttcaatattatatttctattttta 12769294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 375
Target Start/End: Complemental strand, 20775084 - 20775010
Alignment:
Q  300 aacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 375  Q
    ||||| ||||| || ||||||||||| |||||||| ||||||||| ||||| |||| | ||||||| |||||||||    
T  20775084 aacaatattttaacctttaaaaagat-aaatttattatttttcacaatttttcaatgcaatatttcaatttttatc 20775010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 387
Target Start/End: Complemental strand, 22414676 - 22414598
Alignment:
Q  306 attttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaat 387  Q
    |||||||||||||||||| ||||| | ||| ||||||| ||||||| ||||| |||||  | ||||||||| ||||||||||    
T  22414676 attttgacttttaaaaagttaaaa-tcatcttttttcatcattttctaatacaatatt--tttttttatcctcttatccaat 22414598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 374
Target Start/End: Complemental strand, 12402909 - 12402842
Alignment:
Q  306 attttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttat 374  Q
    ||||| |||||||||||  ||||||  |||||||||||||||||   ||||| ||||||||||||||||    
T  12402909 attttaacttttaaaaaactaaaatc-atcatttttcaccatttcttaatacaatatttctatttttat 12402842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 74; Significance: 9e-34; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 282 - 391
Target Start/End: Complemental strand, 16880 - 16773
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||| |||||||||||||||||| | | |||||||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  16880 catgtttgcattggtttcaacaatattttgacttttaaaaag-ttacatttatcatttttcactatttt-caatgctatatttctatttttatcccctta 16783  T
Q  382 tccaatgccc 391  Q
    ||||||||||    
T  16782 tccaatgccc 16773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 282 - 391
Target Start/End: Complemental strand, 27048 - 26941
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||| |||||||||||||||||| | | |||||||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  27048 catgtttgcattggtttcaacaatattttgacttttaaaaag-ttacatttatcatttttcactatttt-caatgctatatttctatttttatcccctta 26951  T
Q  382 tccaatgccc 391  Q
    ||||||||||    
T  26950 tccaatgccc 26941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 282 - 391
Target Start/End: Complemental strand, 37214 - 37107
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 381  Q
    ||||||||||||||||||||||| |||||||||||||||||| | | |||||||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  37214 catgtttgcattggtttcaacaatattttgacttttaaaaag-ttacatttatcatttttcactatttt-caatgctatatttctatttttatcccctta 37117  T
Q  382 tccaatgccc 391  Q
    ||||||||||    
T  37116 tccaatgccc 37107  T

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Target: scaffold0002 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 282 - 362
Target Start/End: Complemental strand, 392241 - 392162
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatat 362  Q
    ||||||||||| |||||||||||||||||||||||||||||| | |||||||||| |||| |||||||| |||| ||||||    
T  392241 catgtttgcatcggtttcaacaacattttgacttttaaaaag-ttaaatttatcactttttaccatttttcaatgctatat 392162  T

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Target: scaffold0809 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 394
Target Start/End: Complemental strand, 4335 - 4268
Alignment:
Q  327 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaa 394  Q
    |||||||||| ||||||| |||||||||| |||||||| ||||||||||||  ||||||||| |||||    
T  4335 aaatttatcacttttcacaattttccaatgctatatttttatttttatccctctatccaatgtcccaa 4268  T

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Target: scaffold0809; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 4755 - 4709
Alignment:
Q  282 catgtttgcattggtttcaacaacattttgacttttaaaaagataaa 328  Q
    ||||||||||||  |||||||||||| ||||||||||||||| ||||    
T  4755 catgtttgcattaatttcaacaacatattgacttttaaaaagttaaa 4709  T

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Target: scaffold0144 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 375
Target Start/End: Original strand, 39614 - 39679
Alignment:
Q  309 ttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 375  Q
    ||||||||||||||| |||| | | ||| ||||||| |||||||||||| || ||||||||||||||    
T  39614 ttgacttttaaaaagttaaattct-tcagttttcactattttccaatacaatgtttctatttttatc 39679  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 37441 - 37393
Alignment:
Q  340 ttcaccattttccaatactatatttctatttttatccccttatccaatg 388  Q
    |||| |||||| |||||| ||||||||||||| |||| |||||||||||    
T  37441 ttcatcatttttcaatacaatatttctattttaatcctcttatccaatg 37393  T

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Target: scaffold0050; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 37483 - 37428
Alignment:
Q  287 ttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttca 343  Q
    ||||||||| ||||| ||||||||||||||| ||||| | ||||| |||||||||||    
T  37483 ttgcattggattcaataacattttgacttttgaaaag-ttaaattcatcatttttca 37428  T

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