View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9372_low_20 (Length: 286)
Name: NF9372_low_20
Description: NF9372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9372_low_20 |
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Alignment Details
Target: chr6 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 11600399 - 11600677
Alignment:
| Q |
1 |
cccaaacaaaatataagtgctgctaagggaaaacaaaggggacaccatgaaacttattattaagtttcacctatctacaaaaccatggaaattatctcat |
100 |
Q |
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| T |
11600399 |
cccaaacaaaatataagtgctgctaagggaaaacaaaggggacaccatgaaacttattattaagtttcacctatctacaaaaccatggaaattatctcat |
11600498 |
T |
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| Q |
101 |
cataaaacattctctctagtcctttcaatagaatgaaatttgacatgaaaatcaatgatttcacatatgaaataacttccaacaaggaattaaaccattg |
200 |
Q |
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| T |
11600499 |
cataaaacattctctctagtcctttcaatagaatgaaatttgacatgaaaatcaatgatttcacatatgaaataacttccaacaaggaattaaaccattg |
11600598 |
T |
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| Q |
201 |
tatattttgaaagtagaaagaaaaatggctatctatctatggtcctccaagcacagcattctcaatgtcttctctgctc |
279 |
Q |
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||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
11600599 |
tatattttgaaagtataaagcaaaatggctatctatctatggtccaccaagcacagcattctcaatgtcttctctgctc |
11600677 |
T |
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