View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9373_7 (Length: 322)
Name: NF9373_7
Description: NF9373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9373_7 |
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Alignment Details
Target: chr5 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 314
Target Start/End: Original strand, 42025859 - 42026170
Alignment:
| Q |
1 |
cacgtgctaaccaaataagtgacattcctaagaaacattcattgtttggtactgtttatgccattgacaatcctcttagggaaggtcctgaagaaacatc |
100 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42025859 |
cacgtgctaaccaaacaagtgacattcctaagaaacattcattgtttggtactgtttatgccattgacaatcctcttagggaaggtcctgaagaaacatc |
42025958 |
T |
|
| Q |
101 |
aaatgtggttggaaatgcacaagatctttatgtggcatctctagccaaagtgaagatgtgacacttactatgtatgttgattatgctttcacctctggtg |
200 |
Q |
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|||||| |||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42025959 |
aaatgtagttggaaatgcacaaggtctttatgtggcatct--agccagagtgaagatgtgacacttactatgtatgttgattatgctttcacctctggtg |
42026056 |
T |
|
| Q |
201 |
aattaaatggaagctcctttagtgttctttcgaggaatccggtgagggaaccgacgagggaactcgcggtggtcggaggaagaggaatgtttaggatggc |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
42026057 |
aattaaatggaagctcctttagtgttctttcgaggaatccggtgagggaaccgacgagggaactcgcggtggtcggaggaagaggaaagtttaggatggc |
42026156 |
T |
|
| Q |
301 |
cacaggttctgctc |
314 |
Q |
| |
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||| |||| ||||| |
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| T |
42026157 |
cactggttttgctc |
42026170 |
T |
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