View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9373_low_3 (Length: 439)

Name: NF9373_low_3
Description: NF9373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9373_low_3
NF9373_low_3
[»] chr3 (39 HSPs)
chr3 (1-420)||(45236655-45237075)
chr3 (235-328)||(51448004-51448097)
chr3 (241-327)||(26490212-26490298)
chr3 (235-321)||(52138701-52138787)
chr3 (242-327)||(345013-345098)
chr3 (235-328)||(25191273-25191366)
chr3 (235-328)||(28245331-28245424)
chr3 (240-328)||(38849988-38850076)
chr3 (235-328)||(33272323-33272416)
chr3 (235-327)||(5168723-5168815)
chr3 (235-299)||(47233891-47233955)
chr3 (235-327)||(53519481-53519573)
chr3 (235-327)||(54128273-54128365)
chr3 (242-328)||(2341016-2341102)
chr3 (241-299)||(36820260-36820318)
chr3 (244-317)||(42510315-42510388)
chr3 (235-327)||(45728041-45728133)
chr3 (241-293)||(46431972-46432024)
chr3 (261-325)||(50249278-50249342)
chr3 (235-305)||(54278937-54279007)
chr3 (235-300)||(21995-22060)
chr3 (262-327)||(653859-653924)
chr3 (242-291)||(38054639-38054688)
chr3 (243-327)||(29919199-29919283)
chr3 (243-327)||(29968352-29968436)
chr3 (261-305)||(47542033-47542077)
chr3 (235-299)||(49841534-49841598)
chr3 (240-327)||(23534869-23534956)
chr3 (246-292)||(19736926-19736972)
chr3 (235-289)||(26388414-26388468)
chr3 (245-327)||(43308461-43308543)
chr3 (235-305)||(46568033-46568103)
chr3 (243-292)||(29928585-29928634)
chr3 (243-292)||(29977739-29977788)
chr3 (343-388)||(37788794-37788839)
chr3 (261-326)||(43695086-43695151)
chr3 (239-280)||(45289393-45289434)
chr3 (342-397)||(2128341-2128397)
chr3 (235-279)||(39600976-39601020)
[»] chr2 (32 HSPs)
chr2 (239-419)||(7825154-7825341)
chr2 (1-98)||(7829972-7830069)
chr2 (243-321)||(45077649-45077727)
chr2 (235-327)||(38429779-38429871)
chr2 (235-327)||(41763336-41763428)
chr2 (235-328)||(2610422-2610515)
chr2 (235-328)||(3865966-3866059)
chr2 (235-328)||(8180674-8180767)
chr2 (235-328)||(11992401-11992494)
chr2 (238-327)||(16097288-16097377)
chr2 (239-328)||(36183345-36183434)
chr2 (235-327)||(41197523-41197615)
chr2 (235-294)||(9556663-9556722)
chr2 (261-327)||(23714579-23714645)
chr2 (261-327)||(24102251-24102317)
chr2 (235-300)||(12734623-12734688)
chr2 (240-305)||(42092436-42092501)
chr2 (265-328)||(19337174-19337237)
chr2 (243-305)||(9647908-9647970)
chr2 (235-328)||(3243946-3244039)
chr2 (235-294)||(38452984-38453043)
chr2 (247-328)||(451929-452010)
chr2 (255-292)||(4598879-4598916)
chr2 (235-328)||(4807486-4807579)
chr2 (235-299)||(18188706-18188769)
chr2 (235-299)||(19527833-19527897)
chr2 (235-327)||(21834449-21834540)
chr2 (235-327)||(45367919-45368011)
chr2 (238-328)||(24583904-24583994)
chr2 (235-305)||(38434868-38434938)
chr2 (170-211)||(7825355-7825396)
chr2 (235-328)||(23997511-23997604)
[»] scaffold0018 (2 HSPs)
scaffold0018 (235-328)||(31362-31455)
scaffold0018 (262-326)||(44193-44257)
[»] chr4 (51 HSPs)
chr4 (235-327)||(45205143-45205235)
chr4 (235-328)||(31960109-31960202)
chr4 (235-328)||(12494644-12494737)
chr4 (240-327)||(11389615-11389704)
chr4 (235-328)||(4440749-4440842)
chr4 (235-328)||(23906596-23906689)
chr4 (238-327)||(35690199-35690288)
chr4 (235-328)||(43433812-43433905)
chr4 (235-328)||(48174388-48174481)
chr4 (235-328)||(48622836-48622929)
chr4 (235-328)||(50286865-50286958)
chr4 (235-328)||(52569810-52569903)
chr4 (241-317)||(17900385-17900461)
chr4 (235-294)||(2588909-2588968)
chr4 (235-305)||(20105766-20105836)
chr4 (235-305)||(56375207-56375277)
chr4 (235-328)||(436123-436216)
chr4 (235-328)||(1777310-1777403)
chr4 (235-328)||(33191143-33191236)
chr4 (261-318)||(33709823-33709880)
chr4 (235-328)||(53707688-53707781)
chr4 (235-327)||(1211685-1211777)
chr4 (235-327)||(31458923-31459015)
chr4 (261-327)||(27450494-27450560)
chr4 (235-328)||(33227103-33227196)
chr4 (235-328)||(47265497-47265590)
chr4 (235-300)||(54470129-54470194)
chr4 (235-291)||(37797783-37797839)
chr4 (235-291)||(43070059-43070115)
chr4 (235-299)||(45423542-45423606)
chr4 (235-323)||(49987327-49987415)
chr4 (235-318)||(31403315-31403398)
chr4 (261-327)||(30853311-30853377)
chr4 (246-327)||(7092525-7092606)
chr4 (241-294)||(25967568-25967621)
chr4 (235-328)||(46583119-46583212)
chr4 (235-327)||(1793355-1793447)
chr4 (235-327)||(41009645-41009737)
chr4 (235-294)||(21106912-21106971)
chr4 (243-294)||(44860782-44860833)
chr4 (235-326)||(45185312-45185403)
chr4 (242-300)||(25755239-25755297)
chr4 (235-329)||(28236078-28236172)
chr4 (235-292)||(18966483-18966540)
chr4 (235-328)||(27983094-27983187)
chr4 (242-327)||(40933198-40933283)
chr4 (240-293)||(41192763-41192816)
chr4 (235-283)||(10208977-10209025)
chr4 (235-291)||(17668406-17668462)
chr4 (243-327)||(22421011-22421095)
chr4 (261-293)||(49739115-49739147)
[»] chr7 (44 HSPs)
chr7 (235-328)||(11593854-11593947)
chr7 (235-328)||(35906496-35906589)
chr7 (235-328)||(31005117-31005210)
chr7 (235-328)||(36651888-36651981)
chr7 (235-328)||(34869314-34869407)
chr7 (235-328)||(37617838-37617931)
chr7 (246-327)||(47848569-47848650)
chr7 (235-328)||(49029170-49029263)
chr7 (235-326)||(13859303-13859392)
chr7 (235-327)||(36514500-36514592)
chr7 (243-327)||(42187366-42187449)
chr7 (235-318)||(30200254-30200337)
chr7 (235-321)||(39811858-39811944)
chr7 (262-327)||(25579393-25579458)
chr7 (235-328)||(33072848-33072941)
chr7 (235-328)||(33350101-33350194)
chr7 (235-328)||(36869584-36869677)
chr7 (235-300)||(39906665-39906730)
chr7 (235-327)||(43282300-43282392)
chr7 (242-327)||(24549989-24550074)
chr7 (236-293)||(46356152-46356209)
chr7 (261-305)||(14593678-14593722)
chr7 (261-305)||(16013201-16013245)
chr7 (235-327)||(38606900-38606992)
chr7 (235-327)||(45836775-45836867)
chr7 (235-290)||(29653849-29653904)
chr7 (248-327)||(32630490-32630569)
chr7 (235-294)||(40139211-40139270)
chr7 (240-327)||(42177315-42177402)
chr7 (235-327)||(28628228-28628317)
chr7 (235-305)||(43491225-43491295)
chr7 (235-305)||(44855467-44855537)
chr7 (238-327)||(7272934-7273023)
chr7 (235-316)||(43281582-43281663)
chr7 (242-314)||(1740705-1740777)
chr7 (261-305)||(5335839-5335883)
chr7 (235-291)||(27022001-27022057)
chr7 (235-299)||(35559289-35559353)
chr7 (263-305)||(28542206-28542248)
chr7 (241-294)||(48736200-48736253)
chr7 (343-390)||(2223079-2223127)
chr7 (235-287)||(8492528-8492580)
chr7 (235-291)||(36102060-36102116)
chr7 (235-291)||(36136695-36136751)
[»] chr1 (43 HSPs)
chr1 (235-328)||(1210639-1210732)
chr1 (235-327)||(696164-696256)
chr1 (235-328)||(8671814-8671907)
chr1 (235-328)||(9592628-9592721)
chr1 (244-317)||(26016342-26016415)
chr1 (235-328)||(30202425-30202518)
chr1 (235-328)||(49347688-49347781)
chr1 (235-327)||(4379900-4379992)
chr1 (235-311)||(9509229-9509305)
chr1 (235-327)||(9599689-9599781)
chr1 (235-328)||(32083040-32083133)
chr1 (235-327)||(15085829-15085921)
chr1 (235-328)||(8391666-8391759)
chr1 (235-328)||(22089988-22090081)
chr1 (235-328)||(43240676-43240769)
chr1 (235-328)||(51601952-51602045)
chr1 (242-327)||(52442806-52442891)
chr1 (239-327)||(18469379-18469467)
chr1 (235-328)||(32231249-32231342)
chr1 (235-328)||(34792644-34792736)
chr1 (235-328)||(51441060-51441153)
chr1 (235-328)||(4001750-4001841)
chr1 (261-327)||(46226603-46226669)
chr1 (242-327)||(1661321-1661406)
chr1 (238-327)||(19936417-19936506)
chr1 (235-300)||(37463166-37463231)
chr1 (235-324)||(38807970-38808058)
chr1 (235-291)||(16273115-16273171)
chr1 (241-294)||(43423645-43423700)
chr1 (235-275)||(52561906-52561946)
chr1 (241-300)||(34827403-34827462)
chr1 (240-294)||(4590824-4590878)
chr1 (240-318)||(15577328-15577406)
chr1 (240-294)||(16822319-16822373)
chr1 (240-294)||(17815403-17815456)
chr1 (350-419)||(34619476-34619546)
chr1 (235-325)||(52633467-52633556)
chr1 (235-284)||(16142179-16142228)
chr1 (255-292)||(18793303-18793340)
chr1 (235-288)||(19908665-19908718)
chr1 (242-282)||(6025545-6025585)
chr1 (235-327)||(40419534-40419626)
chr1 (244-292)||(40920841-40920889)
[»] chr6 (26 HSPs)
chr6 (235-327)||(608054-608146)
chr6 (235-327)||(5631713-5631805)
chr6 (235-305)||(9594007-9594077)
chr6 (235-328)||(14030700-14030794)
chr6 (235-328)||(9706670-9706763)
chr6 (235-328)||(28085270-28085363)
chr6 (235-323)||(10100152-10100240)
chr6 (235-327)||(30031151-30031243)
chr6 (241-317)||(33083963-33084039)
chr6 (241-317)||(33998305-33998381)
chr6 (235-297)||(9568585-9568647)
chr6 (261-305)||(4948628-4948672)
chr6 (261-305)||(4955599-4955643)
chr6 (235-327)||(6056065-6056157)
chr6 (235-327)||(20427931-20428023)
chr6 (249-311)||(6293678-6293740)
chr6 (235-305)||(32755836-32755906)
chr6 (269-326)||(2079229-2079286)
chr6 (238-327)||(5258448-5258537)
chr6 (240-292)||(7513283-7513335)
chr6 (266-326)||(12134227-12134287)
chr6 (241-327)||(28027126-28027212)
chr6 (241-294)||(546927-546980)
chr6 (240-305)||(7513686-7513751)
chr6 (262-290)||(14389483-14389511)
chr6 (235-327)||(33496079-33496171)
[»] scaffold0157 (1 HSPs)
scaffold0157 (235-328)||(25740-25833)
[»] chr8 (37 HSPs)
chr8 (235-328)||(39946751-39946844)
chr8 (235-305)||(36395245-36395315)
chr8 (235-321)||(36565536-36565622)
chr8 (235-328)||(36545041-36545134)
chr8 (235-327)||(15215566-15215658)
chr8 (235-299)||(29520583-29520647)
chr8 (235-321)||(40813223-40813309)
chr8 (235-327)||(37077660-37077752)
chr8 (235-290)||(32043522-32043577)
chr8 (235-294)||(36069571-36069630)
chr8 (235-328)||(12492137-12492230)
chr8 (262-327)||(45512818-45512883)
chr8 (235-328)||(2796449-2796544)
chr8 (240-300)||(13171949-13172009)
chr8 (235-326)||(16917080-16917171)
chr8 (244-327)||(39953568-39953651)
chr8 (236-327)||(42854300-42854391)
chr8 (235-292)||(6510721-6510778)
chr8 (235-292)||(10080200-10080257)
chr8 (235-300)||(30783335-30783400)
chr8 (235-288)||(44681334-44681387)
chr8 (235-292)||(45419169-45419226)
chr8 (244-292)||(10824464-10824512)
chr8 (235-327)||(13986389-13986481)
chr8 (235-327)||(18125070-18125162)
chr8 (235-299)||(28300407-28300471)
chr8 (235-327)||(30748354-30748446)
chr8 (240-291)||(2518691-2518742)
chr8 (266-305)||(30456537-30456576)
chr8 (261-327)||(29735701-29735767)
chr8 (245-327)||(36143264-36143346)
chr8 (235-292)||(16351320-16351377)
chr8 (242-311)||(33511271-33511340)
chr8 (262-327)||(43732462-43732527)
chr8 (250-299)||(44681386-44681435)
chr8 (235-327)||(18752168-18752260)
chr8 (235-275)||(21121105-21121145)
[»] chr5 (36 HSPs)
chr5 (235-328)||(1275159-1275252)
chr5 (235-328)||(10639191-10639284)
chr5 (235-328)||(12492682-12492775)
chr5 (235-328)||(1287884-1287977)
chr5 (235-327)||(16347673-16347765)
chr5 (235-328)||(2075769-2075862)
chr5 (235-328)||(24178404-24178497)
chr5 (235-299)||(21952274-21952338)
chr5 (235-300)||(7678402-7678467)
chr5 (235-328)||(20318881-20318969)
chr5 (243-300)||(34194799-34194856)
chr5 (235-291)||(9235000-9235056)
chr5 (235-326)||(5305512-5305603)
chr5 (261-300)||(27998345-27998384)
chr5 (240-327)||(30588348-30588435)
chr5 (235-305)||(11002716-11002786)
chr5 (262-327)||(21093671-21093736)
chr5 (235-300)||(28186963-28187028)
chr5 (235-328)||(28977152-28977245)
chr5 (235-320)||(32516460-32516545)
chr5 (256-321)||(34272923-34272988)
chr5 (240-321)||(36200683-36200764)
chr5 (261-294)||(43558135-43558168)
chr5 (240-284)||(6888931-6888975)
chr5 (235-291)||(26884984-26885040)
chr5 (238-294)||(4496310-4496368)
chr5 (235-294)||(6368220-6368279)
chr5 (265-326)||(5848401-5848462)
chr5 (242-311)||(10083041-10083109)
chr5 (235-300)||(17340732-17340797)
chr5 (240-325)||(41110041-41110126)
chr5 (235-327)||(27789-27880)
chr5 (235-315)||(3301751-3301831)
chr5 (351-390)||(4991042-4991082)
chr5 (244-320)||(28676501-28676577)
chr5 (235-283)||(31636213-31636261)
[»] scaffold0045 (1 HSPs)
scaffold0045 (235-300)||(86902-86967)
[»] scaffold0036 (1 HSPs)
scaffold0036 (235-328)||(4567-4660)
[»] scaffold0113 (1 HSPs)
scaffold0113 (236-328)||(11894-11986)
[»] scaffold0024 (1 HSPs)
scaffold0024 (235-327)||(82616-82708)


Alignment Details
Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 420
Target Start/End: Complemental strand, 45237075 - 45236655
Alignment:
Q  1 atattatctcctataacctcttgttgcaatgcttctgctaaaccacggaggccaaatttactggctgaataagctacataaccataaattcccacctaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45237075 atattatctcctataacctcttgttgcaatgcttctgctaaaccacggaggccaaatttactggctgaataagctacataaccataaattcccacctaaa 45236976  T
Q  101 ctccaaattnnnnnnnnnnnnnnnnnnccacatcactagattatccctctacatactcaaaccgaaggctattttccatcatatttacaactataggtgc 200  Q
    |||||||||                  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45236975 ctccaaattaaaaaaataaataaaaaaccacatcactagattatctctctacatactcaaaccgaaggctattttccatcatatttacaactataggtgc 45236876  T
Q  201 taatccaacacacacannnnnnnnnnnnnnnnnnaatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 300  Q
    || |||||||||||||                  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45236875 tactccaacacacaca--ctctctctgtctctctaatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 45236778  T
Q  301 ggctaggcttactttattctcgtgttgaac--nnnnnnnnttaaactttactttatctttcgttat-aaaatagcttatacacaaacacttatggtataa 397  Q
    ||||||||||||||||||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  45236777 ggctaggcttactttattctcgtgttgaacaaaaaaaaaattaaactttactttatctttcgttataaaaatagcttatacacaaacacttatggtataa 45236678  T
Q  398 agtgcaaattaagctgtttatct 420  Q
    |||||||||||||||||||||||    
T  45236677 agtgcaaattaagctgtttatct 45236655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 51448004 - 51448097
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||| ||||  |||| || |||||| ||||||    
T  51448004 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttagttgattctcatgttga 51448097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 26490298 - 26490212
Alignment:
Q  241 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||| |||||||||||| |||| |||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| |||||    
T  26490298 gtcattgctaatcatatcccgtcttgtcttaccactcatccaacgcaacatcctcatctccgctacacttacttgattctcttgttg 26490212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 321
Target Start/End: Complemental strand, 52138787 - 52138701
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctc 321  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| ||||||    
T  52138787 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctc 52138701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 345013 - 345098
Alignment:
Q  242 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||| ||||  |||||||||||||||| |||||||  ||||||||||| || |||| |||||||||||||| ||||||    
T  345013 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttg 345098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 25191366 - 25191273
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||| |||||||  ||||||||||  ||||||||||||||| |||||| ||||||||||| ||||| ||||  ||||||||| |||||||||||    
T  25191366 aatgatgtcattcttaatcatatcatgtctagtcttaccactcatccagcgcaacatcctcatctctgctacacttactttactctcgtgttga 25191273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 28245424 - 28245331
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||| ||||||| |||||| ||||||| ||||||||||||| |||||||||||||||||| ||||  ||||  ||||||| |||||| ||||||    
T  28245424 aatgatgtcattcctaatcctatccaggctagtcttaccactcatccaacgcaacatcctcatctttgctacacttacttaattctcatgttga 28245331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 240 - 328
Target Start/End: Complemental strand, 38850076 - 38849988
Alignment:
Q  240 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    ||||||| |||||||||||  |||||||||||| || |||||| ||||||||||| ||||| ||||  ||||||| |||||||||||||    
T  38850076 tgtcattcctaatcatatcatgtctagtcttactactcatccagcgcaacatcctcatctctgctacacttacttgattctcgtgttga 38849988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 33272323 - 33272416
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    ||||||||||||  ||||| ||||  ||||||||||||||| ||||||| |||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  33272323 aatggtgtcattcttaatcctatcatgtctagtcttaccactcatccaatgcaacatcctcatctctgctacacttacttgattctcatgttga 33272416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 5168815 - 5168723
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||| |||||| ||||| |||||||||||||   |||||| ||||||||||| ||||| ||||  ||||||||| |||| |||||    
T  5168815 aatggtgtcattcctaatcctatcctgtctagtcttacctatcatccagcgcaacatcctcatctccgctacacttactttactctcatgttg 5168723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 47233891 - 47233955
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 299  Q
    ||||||||||||||||||| ||||  ||||||||||||||| |||||||||||| ||||| ||||    
T  47233891 aatggtgtcatttctaatcttatcatgtctagtcttaccactcatccaacgcaatatcctcatct 47233955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 53519573 - 53519481
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||||  ||||| ||||| ||||||| ||||||| |||||||||||||||||| || || ||||  || |||||| ||||||||||    
T  53519573 aatggtgtcattcttaatcctatcctgtctagtattaccactcatccaacgcaacatcctcatttccgctacactaactttactctcgtgttg 53519481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 54128365 - 54128273
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||||  ||||| ||||  ||||||| ||||||| |||| ||||||||||||| ||||| |||| |||||||| |||||| |||||    
T  54128365 aatggtgtcattcataatcctatcgcgtctagttttaccactcatcaaacgcaacatcctcatctctgctaagcttacttgattctcatgttg 54128273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 242 - 328
Target Start/End: Original strand, 2341016 - 2341102
Alignment:
Q  242 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||  ||||  ||||||||||||||||||||||| |||||||||| |||||  |||  |||| |||||||||| |||||    
T  2341016 tcatttctaattctatcatgtctagtcttaccacacatccaatgcaacatcctcatctccactatccttattttattctcgcgttga 2341102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 241 - 299
Target Start/End: Original strand, 36820260 - 36820318
Alignment:
Q  241 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 299  Q
    ||||||||||||| ||||  |||||||||||||||||||||||||||||| ||| ||||    
T  36820260 gtcatttctaatcctatctcgtctagtcttaccacacatccaacgcaacaaccttatct 36820318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 317
Target Start/End: Original strand, 42510315 - 42510388
Alignment:
Q  244 atttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttat 317  Q
    |||||||| | |||||  |||||||||||||||||||||| |||||||||| ||||| |||| ||||| |||||    
T  42510315 atttctaaacctatcccatctagtcttaccacacatccaatgcaacatcctcatctctgctatgcttattttat 42510388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 45728133 - 45728041
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||| |||||||||||||| |||   |||| |||||||||| |||||| ||||||||||| ||||| ||||  ||||||| |||||| |||||    
T  45728133 aatgatgtcatttctaatcctatttcgtctcgtcttaccactcatccagcgcaacatcctcatctctgctacacttacttgattctcatgttg 45728041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 293
Target Start/End: Original strand, 46431972 - 46432024
Alignment:
Q  241 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcc 293  Q
    ||||||||||| | ||||| ||||||||||||||||||||||| |||||||||    
T  46431972 gtcatttctaaccctatcctgtctagtcttaccacacatccaatgcaacatcc 46432024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 325
Target Start/End: Complemental strand, 50249342 - 50249278
Alignment:
Q  261 gtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgt 325  Q
    |||||||| |||||||||||||||| |||||| | ||||| |||| ||||| |||||||||||||    
T  50249342 gtctagtcctaccacacatccaacgaaacatcatcatctccgctatgcttattttattctcgtgt 50249278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 54279007 - 54278937
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    |||||||||||| |||||  ||||  |||||||||||||||  ||||||||||||||||| ||||| ||||    
T  54279007 aatggtgtcattcctaattctatcttgtctagtcttaccacttatccaacgcaacatcctcatctctgcta 54278937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 22060 - 21995
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 300  Q
    ||||||| |||| |||||| ||||  ||||||||||||||| |||||| ||||||||||| |||||    
T  22060 aatggtgacattcctaatcctatcatgtctagtcttaccactcatccagcgcaacatcctcatctc 21995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 327
Target Start/End: Original strand, 653859 - 653924
Alignment:
Q  262 tctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||| |||||||||||||||||||| ||||| ||||  |||| || ||||||||| ||||||||    
T  653859 tctagttttaccacacatccaacgcaaaatcctcatctttgctacgcgtactttattatcgtgttg 653924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 38054639 - 38054688
Alignment:
Q  242 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 291  Q
    |||||||||||| ||||| ||||||||||||||| ||| |||||||||||    
T  38054639 tcatttctaatcctatcccgtctagtcttaccacccattcaacgcaacat 38054688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 327
Target Start/End: Complemental strand, 29919283 - 29919199
Alignment:
Q  243 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||||||||  ||||| || ||||||||||||||| ||||||| | |||||  |||  || | |||||||||||||||    
T  29919283 catttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctccactacactgattttattctcgtgttg 29919199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 327
Target Start/End: Complemental strand, 29968436 - 29968352
Alignment:
Q  243 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||||||||  ||||| || ||||||||||||||| ||||||| | |||||  |||  || | |||||||||||||||    
T  29968436 catttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctccactacactgattttattctcgtgttg 29968352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 47542033 - 47542077
Alignment:
Q  261 gtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    ||||||||||||||| |||||||||||||||||| ||||| ||||    
T  47542033 gtctagtcttaccactcatccaacgcaacatcctcatctctgcta 47542077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 49841598 - 49841534
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 299  Q
    |||| |||||||||||||| || |  |||||||||||| ||||||||||| ||||||||| ||||    
T  49841598 aatgttgtcatttctaatcttacctcgtctagtcttactacacatccaacacaacatcctcatct 49841534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 327
Target Start/End: Original strand, 23534869 - 23534956
Alignment:
Q  240 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||||| ||||   |||||| ||| || ||||| |||||||||||||  |||| |||| ||||| ||||||||| |||||    
T  23534869 tgtcatttctaatcttatctgatctagttttatcaaacatctaacgcaacatcctcttctccgctacgcttattttattctcatgttg 23534956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 19736972 - 19736926
Alignment:
Q  246 ttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 292  Q
    |||||||| ||||| ||||||||||||||| |||||||| |||||||    
T  19736972 ttctaatcgtatcccgtctagtcttaccactcatccaacacaacatc 19736926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 26388468 - 26388414
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaac 289  Q
    |||||| | ||||||||||||||  | |||||||| |||||||||||||||||||    
T  26388468 aatggtttaatttctaatcatatataatctagtctaaccacacatccaacgcaac 26388414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 327
Target Start/End: Complemental strand, 43308543 - 43308461
Alignment:
Q  245 tttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||| ||||  |||||||||||||||| || |||||||||| | |  |||||| || | ||| |||||||||||||||    
T  43308543 tttctaatcctatcatgtctagtcttaccacaaattcaacgcaacaccttcgtctcggttacgattattttattctcgtgttg 43308461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 46568103 - 46568033
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    |||| |||||||||||||   |||  ||||||||||| |||||||||||| ||||||||| ||||| ||||    
T  46568103 aatgttgtcatttctaattcaatctggtctagtcttaacacacatccaacacaacatcctcatctctgcta 46568033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 29928585 - 29928634
Alignment:
Q  243 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 292  Q
    ||||||||||||||||  ||||| || ||||||||||||||| |||||||    
T  29928585 catttctaatcatatctcgtctaatcgtaccacacatccaacacaacatc 29928634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 29977739 - 29977788
Alignment:
Q  243 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 292  Q
    ||||||||||||||||  ||||| || ||||||||||||||| |||||||    
T  29977739 catttctaatcatatctcgtctaatcgtaccacacatccaacacaacatc 29977788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 37788839 - 37788794
Alignment:
Q  343 actttactttatctttcgttataaaatagcttatacacaaacactt 388  Q
    |||||| ||||||||| ||||||||||| |||||||| ||||||||    
T  37788839 actttattttatcttttgttataaaataacttatacataaacactt 37788794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 326
Target Start/End: Original strand, 43695086 - 43695151
Alignment:
Q  261 gtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt 326  Q
    |||| |||||||||  |||||||||||||||||| ||||| | ||  ||||||| |||||||||||    
T  43695086 gtctggtcttaccattcatccaacgcaacatcctcatctctgttacacttacttgattctcgtgtt 43695151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 45289393 - 45289434
Alignment:
Q  239 gtgtcatttctaatcatatccagtctagtcttaccacacatc 280  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  45289393 gtgtcatttctaatcttatcccgtctagtcttatcacacatc 45289434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 2128341 - 2128397
Alignment:
Q  342 aactttactttatctttcgttata-aaatagcttatacacaaacacttatggtataa 397  Q
    ||||||| ||||||||| |||||| |||||||||||||| |||| |||||| |||||    
T  2128341 aactttattttatcttttgttatagaaatagcttatacataaacgcttatgctataa 2128397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 39600976 - 39601020
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacat 279  Q
    |||| |||||||||||||| |||||  ||||||||||||||||||    
T  39600976 aatgttgtcatttctaatcttatcccatctagtcttaccacacat 39601020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 4e-45; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 239 - 419
Target Start/End: Complemental strand, 7825341 - 7825154
Alignment:
Q  239 gtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt------gaacnn 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||       ||       
T  7825341 gtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctctgctacgcttactttattctcatgttccacaaaaaaga 7825242  T
Q  333 nnnnnnttaaactttactttatctttcgttat-aaaatagcttatacacaaacacttatggtataaagtgcaaattaagctgtttatc 419  Q
          || ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||| | ||||||||||||||||||    
T  7825241 aaaaaatttaactttactttatcttttgttataaaaatagcttatacagaaacacttatggtataaacttcaaattaagctgtttatc 7825154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 7830069 - 7829972
Alignment:
Q  1 atattatctcctataacctcttgttgcaatgcttctgctaaaccacggaggccaaatttactggctgaataagctacataaccataaattcccaccta 98  Q
    ||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| || |||||||||||||| |||||||||||||||||    
T  7830069 atattatctccaataacctcttgttgcaatgcctctgctaacccacggaggccaaatttactagccgaataagctacatagccataaattcccaccta 7829972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 45077727 - 45077649
Alignment:
Q  243 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctc 321  Q
    ||||||||||  |||| ||||||||||||||||||||||||||||||||||| ||||| |||| ||||| |||||||||    
T  45077727 catttctaattctatctagtctagtcttaccacacatccaacgcaacatcctcatctcagctatgcttattttattctc 45077649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 38429871 - 38429779
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  |||||| || ||||||||||    
T  38429871 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctccgctacacttactctactctcgtgttg 38429779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 41763336 - 41763428
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||| ||||||||||| ||||| ||||  ||||||||| ||||||||||    
T  41763336 aatggtgtcattcctaatcctatcttgtctagtcttaccactcatccatcgcaacatcctcatctccgctacacttactttactctcgtgttg 41763428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 2610515 - 2610422
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| | ||| ||||||||||||||| ||||||||||| |||||| ||||| ||||  ||||||| |||||| ||||||    
T  2610515 aatggtgtcattcctaatcctgtcctgtctagtcttaccactcatccaacgcagcatcctcatctctgctacacttacttgattctcatgttga 2610422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 3866059 - 3865966
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||| | ||||| ||||  ||||||| |||||| ||||||    
T  3866059 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcatcatctctgctacacttacttgattctcatgttga 3865966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 8180767 - 8180674
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||| ||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  8180767 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacacaacatcctcatctctgctacacttacttgattctcatgttga 8180674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 11992401 - 11992494
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||||| ||||||| |||||| ||||||||||| ||||| ||||  ||||||||| |||||||||||    
T  11992401 aatggtgtcattcctaatcttatcatgtctagtattaccactcatccagcgcaacatcctcatctccgctacacttactttactctcgtgttga 11992494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 327
Target Start/End: Original strand, 16097288 - 16097377
Alignment:
Q  238 ggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||  |||||||||| ||||| ||||  ||||||| |||||| |||||    
T  16097288 ggtgtcatttctaatcatatcccatctagtcttaccactcatccagtgcaacatcctcatctccgctacacttacttgattctcatgttg 16097377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 36183434 - 36183345
Alignment:
Q  239 gtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  36183434 gtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 36183345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 41197523 - 41197615
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||| | ||||||||||| ||||| ||||  ||||||||| ||||||||||    
T  41197523 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatctagcgcaacatcctcatctccgctacacttactttactctcgtgttg 41197615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 9556663 - 9556722
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 294  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  9556663 aatgttgtcatttctaatcatatcccgtctaatcttaccacacatccaacacaacatcct 9556722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 327
Target Start/End: Original strand, 23714579 - 23714645
Alignment:
Q  261 gtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||||||||||||||| |||||| |||||||| |||| ||||| |||||| ||||||||    
T  23714579 gtctagtcttaccacacatccaacacaacattctaatctctgctatgcttaatttattttcgtgttg 23714645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 327
Target Start/End: Original strand, 24102251 - 24102317
Alignment:
Q  261 gtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||||||||||||||| |||||| |||||||| |||| ||||| |||||| ||||||||    
T  24102251 gtctagtcttaccacacatccaacacaacattctaatctctgctatgcttaatttattttcgtgttg 24102317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 12734688 - 12734623
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 300  Q
    ||||||||||||||||||| ||||| ||||||||||||||| |||||| | ||||||||| |||||    
T  12734688 aatggtgtcatttctaatcctatcccgtctagtcttaccactcatccagcacaacatcctcatctc 12734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 42092501 - 42092436
Alignment:
Q  240 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    |||||||||||||||||||| |||||||||||| |||||||||| |||||||| | ||||| ||||    
T  42092501 tgtcatttctaatcatatcccgtctagtcttactacacatccaatgcaacatcatcatctctgcta 42092436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 19337174 - 19337237
Alignment:
Q  265 agtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    ||||||||||||||||||||| |||||||| |||||  ||| ||||| ||||||||||||||||    
T  19337174 agtcttaccacacatccaacgtaacatcctcatctccactacgcttattttattctcgtgttga 19337237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 243 - 305
Target Start/End: Original strand, 9647908 - 9647970
Alignment:
Q  243 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    ||||||||||| ||||   ||||||||||||||||||||||||||||||||| ||||| ||||    
T  9647908 catttctaatcttatcacatctagtcttaccacacatccaacgcaacatcctcatctctgcta 9647970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 3243946 - 3244039
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    ||||||||||||  ||||| ||||  || ||||||||| || |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  3243946 aatggtgtcattcataatcctatcatgtgtagtcttactactcatccaacgcaacatccttatctctgctacacttacttgattctcatgttga 3244039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 38452984 - 38453043
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 294  Q
    |||||||||||| |||||| |||   ||||||||||||||| ||||||||||||||||||    
T  38452984 aatggtgtcattcctaatcctatgatgtctagtcttaccactcatccaacgcaacatcct 38453043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 328
Target Start/End: Original strand, 451929 - 452010
Alignment:
Q  247 tctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    ||||||| ||||  ||||||||||||||| |||| |||||||||| || ||||| ||||  ||||||| |||||| ||||||    
T  451929 tctaatcctatcatgtctagtcttaccactcatctaacgcaacatactcatctctgctacacttacttgattctcatgttga 452010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 4598879 - 4598916
Alignment:
Q  255 tatccagtctagtcttaccacacatccaacgcaacatc 292  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  4598879 tatcccgtctagtcttaccacacatccaacgcaacatc 4598916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 4807579 - 4807486
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||| |||||||  ||||| ||||  ||||| ||||||||  |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  4807579 aatgatgtcattcataatcctatcatgtctattcttaccattcatccaacgcaacatcctcatctctgctacacttacttaattctcatgttga 4807486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 18188769 - 18188706
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 299  Q
    |||| |||||||||| ||||||||| |||||| ||||| ||||||||||| ||||||||| ||||    
T  18188769 aatgttgtcatttctgatcatatcccgtctagccttac-acacatccaacacaacatcctcatct 18188706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 19527833 - 19527897
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 299  Q
    |||| |||||| |||||||||| |  ||| |||||| ||||||||||||||||||||||| ||||    
T  19527833 aatgttgtcatgtctaatcatagcacgtccagtcttgccacacatccaacgcaacatcctcatct 19527897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 21834540 - 21834449
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||| ||| |||||||||| ||||   ||||||||||||||||||||||| ||||||| | |||||  | |  ||||||||||||||||||||    
T  21834540 aatgttgtaatttctaatcttatctcatctagtcttaccacacatccaactcaacatctttatctcaac-acacttactttattctcgtgttg 21834449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 45367919 - 45368011
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||||  ||||| ||||  ||||||||||||||  |||||| ||||||||| | ||||| | ||  ||||||||| ||||||||||    
T  45367919 aatggtgtcattcttaatcctatcttgtctagtcttaccattcatccagcgcaacatcatcatctccgttatacttactttactctcgtgttg 45368011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 328
Target Start/End: Original strand, 24583904 - 24583994
Alignment:
Q  238 ggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||  ||||||||||  || |||||||||||| |||||  | ||||||| | ||||| ||||  ||||||| |||||||||||||    
T  24583904 ggtgtcattcttaatcatatcatgtttagtcttaccactcatcccgcacaacatcttcatctctgctacacttacttgattctcgtgttga 24583994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 38434938 - 38434868
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    |||| |||||||||||||| | ||  ||||||| ||||||| ||||||| |||||||||| ||||| ||||    
T  38434938 aatgttgtcatttctaatcttctctcgtctagttttaccacgcatccaatgcaacatcctcatctccgcta 38434868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 7825396 - 7825355
Alignment:
Q  170 tattttccatcatatttacaactataggtgctaatccaacac 211  Q
    |||||| || ||||||||||||||||||||||| ||||||||    
T  7825396 tatttttcaccatatttacaactataggtgctactccaacac 7825355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 23997604 - 23997511
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| ||||||  |||  ||||||||||||||| |||||| ||||||||| | ||||| | ||  |||||||   |||||||||||    
T  23997604 aatggtgtcattcctaatccgatcatgtctagtcttaccactcatccagcgcaacatcttcatctccgttacacttacttggctctcgtgttga 23997511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 31455 - 31362
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||||||||| ||||  ||||||| |||||| ||||||    
T  31455 aatggtgtcattcctaatcttatcctgtctagtcttaccactcatccaacgcaacatcctaatctctgctacacttacttgattctcatgttga 31362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 262 - 326
Target Start/End: Original strand, 44193 - 44257
Alignment:
Q  262 tctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt 326  Q
    |||||||||||| |||||||||||||||||||| ||||| |||  ||||| ||||||||||||||    
T  44193 tctagtcttaccgcacatccaacgcaacatcctcatctccgctgcgcttattttattctcgtgtt 44257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 45205143 - 45205235
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||| ||||||||| ||||| |||| |||||||| ||||||||||||    
T  45205143 aatggtgtcattcctaatcctatcccgtctagtcttaccactcatccaacacaacatcctcatctccgctacgcttacttgattctcgtgttg 45205235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 31960109 - 31960202
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  31960109 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 31960202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 12494737 - 12494644
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  12494737 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 12494644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 327
Target Start/End: Complemental strand, 11389704 - 11389615
Alignment:
Q  240 tgtcatttctaatc--atatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||||||  |||||| ||||||| |||||||||||||||  ||||||||| ||||| |||| |||||||||||||||| ||||    
T  11389704 tgtcatttctaatcctatatcccgtctagttttaccacacatccaatccaacatcctcatctctgctacgcttactttattctcgagttg 11389615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 4440842 - 4440749
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    ||||||| |||| |||||| ||||  ||||||||||||||| |||| ||||||||||||||||||| ||||  ||||||| |||||| ||||||    
T  4440842 aatggtgccattcctaatcctatcatgtctagtcttaccactcatcgaacgcaacatcctaatctctgctacacttacttgattctcatgttga 4440749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 23906596 - 23906689
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  |||||||||| |||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  23906596 aatggtgtcattcctaatcctatcttgtctagtcttgccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 23906689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 35690288 - 35690199
Alignment:
Q  238 ggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||| |||||| ||||  |||||||||||| || |||||||||||||||||| ||||||||||  ||||||| |||||| |||||    
T  35690288 ggtgtcattcctaatcctatctcgtctagtcttactactcatccaacgcaacatcctcatctcggctacacttacttgattctcatgttg 35690199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 43433905 - 43433812
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  |||||||||| |||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  43433905 aatggtgtcattcctaatcctatcttgtctagtcttgccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 43433812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 48174388 - 48174481
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||||||||  ||||||||||||||| |||||||||||||||||| ||||  ||||  ||||||| ||| || ||||||    
T  48174388 aatggtgtcattcctaatcatatcatgtctagtcttaccactcatccaacgcaacatcctcatctttgctatacttacttgattttcatgttga 48174481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 48622836 - 48622929
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| ||||||| |||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  48622836 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaaagcaacatcctcatctctgctacacttacttgattctcatgttga 48622929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 50286958 - 50286865
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| ||||||||||||| |||| ||||| ||||  ||||||| |||||| ||||||    
T  50286958 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacttcctcatctctgctacacttacttgattctcatgttga 50286865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 52569810 - 52569903
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||| ||||||||||||| | |||||||| ||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  52569810 aatggtgtcattcctaatcctatcctgtctagtcttacccctcatccaacacaacatcctgatctctgctacacttacttgattctcatgttga 52569903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 317
Target Start/End: Complemental strand, 17900461 - 17900385
Alignment:
Q  241 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttat 317  Q
    ||||||||||||  |||||  ||||||||||||||||||||||||||||||||| || || |||| |||||||||||    
T  17900461 gtcatttctaattttatcccatctagtcttaccacacatccaacgcaacatcctcatttctgctacgcttactttat 17900385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 2588968 - 2588909
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 294  Q
    |||| |||||||||||||| |||||  |||||||||||||||||||||||||||||||||    
T  2588968 aatgttgtcatttctaatcctatcccttctagtcttaccacacatccaacgcaacatcct 2588909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 20105766 - 20105836
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||| ||||||||| | ||||| ||||    
T  20105766 aatgttgtcatttctaatcatatctcgtctagtcttaccacacatccatcgcaacatcatcatctccgcta 20105836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 56375277 - 56375207
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||    
T  56375277 aatggtgtcattcctaatcttatcttgtctagtcttaccactcatccaacgcaacatcctcatctctgcta 56375207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 436216 - 436123
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    ||||||||||||  ||||| ||||  |||||||||||| || |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  436216 aatggtgtcattcttaatcctatcatgtctagtcttacgactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 436123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 1777310 - 1777403
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||  ||||  ||||||| ||| || ||||||    
T  1777310 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctttgctatacttacttgattttcatgttga 1777403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 33191143 - 33191236
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| |||||  |||| ||||||||| |||||| ||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  33191143 aatggtgtcattcctaatcctatcctatctaatcttaccactcatccagcgcaacatcctcatctctgctacacttacttgattctcatgttga 33191236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 33709880 - 33709823
Alignment:
Q  261 gtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttatt 318  Q
    |||||||||||||||||||||||||||||||| | ||||| |||||||||| ||||||    
T  33709880 gtctagtcttaccacacatccaacgcaacatcatcatctctgctaggcttaatttatt 33709823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 53707781 - 53707688
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| ||| || ||||  |||||||||||| || |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  53707781 aatggtgtcattcctagtcctatcatgtctagtcttactactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 53707688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 1211685 - 1211777
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||| |||||||||||  ||||||| ||||||| ||||||  |||||||||| || || ||||  ||||||| ||||||||||||    
T  1211685 aatggtgtcattcctaatcatatcatgtctagttttaccactcatccagtgcaacatcctcatatccgctacacttacttgattctcgtgttg 1211777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 31459015 - 31458923
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||| ||||| |||||| ||||  ||||||||||||||| || ||||||||||||||| ||||  ||||  ||||||||||| ||||||||    
T  31459015 aatggtatcattcctaatcctatcatgtctagtcttaccactcaaccaacgcaacatcctcatctgtgctacacttactttattttcgtgttg 31458923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 327
Target Start/End: Original strand, 27450494 - 27450560
Alignment:
Q  261 gtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||||||| |||||| ||||||||||| ||||| ||||  ||||||||| ||||||||||    
T  27450494 gtctagtcttaccactcatccagcgcaacatcctcatctccgctacacttactttactctcgtgttg 27450560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 33227196 - 33227103
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    ||||||||||||  ||||| ||||  ||||||||||||||| |||||| ||||||||||| ||||| ||||  ||||| | |||||| ||||||    
T  33227196 aatggtgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcctcatctctgctacacttacatgattctcatgttga 33227103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 47265497 - 47265590
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    ||||||||||||  ||||| ||||  ||||||||||||||| |||||| ||||||||||| ||||  ||||  | ||||| |||||||||||||    
T  47265497 aatggtgtcattcataatcttatcatgtctagtcttaccactcatccagcgcaacatcctcatctttgctacacctacttgattctcgtgttga 47265590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 54470194 - 54470129
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 300  Q
    |||| ||| ||||| ||||||||||  |||||||||||||||||||||| |||||||||| |||||    
T  54470194 aatgttgttatttcaaatcatatcccatctagtcttaccacacatccaatgcaacatcctcatctc 54470129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 291
Target Start/End: Complemental strand, 37797839 - 37797783
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 291  Q
    ||||||||||||||||||| ||||  ||||||||||| ||| |||||||||||||||    
T  37797839 aatggtgtcatttctaatcttatcatgtctagtcttatcactcatccaacgcaacat 37797783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 43070059 - 43070115
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 291  Q
    |||| |||||||||||||| ||||| ||||| |||||||||||||||||| ||||||    
T  43070059 aatgttgtcatttctaatcctatcctgtctaatcttaccacacatccaacccaacat 43070115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 45423606 - 45423542
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 299  Q
    |||| |||||||||||||  ||||| |||||||||||||||||| ||||| ||||||||| ||||    
T  45423606 aatgttgtcatttctaattctatcccgtctagtcttaccacacaaccaacacaacatcctcatct 45423542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 323
Target Start/End: Complemental strand, 49987415 - 49987327
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgt 323  Q
    |||| |||||||||||||| ||||  |||||||||||| | |||| |||| ||||||||| ||||| |||| ||||| | |||||||||    
T  49987415 aatgttgtcatttctaatcctatcatgtctagtcttactaaacattcaacacaacatcctcatctctgctaagcttattatattctcgt 49987327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 31403315 - 31403398
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttatt 318  Q
    |||| |||||||||||||| ||||| ||||| ||| ||||||||| |||| ||||||| | ||||| |||| ||||| ||||||    
T  31403315 aatgttgtcatttctaatcctatcccgtctaatctcaccacacattcaactcaacatcatcatctctgctacgcttaatttatt 31403398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 327
Target Start/End: Complemental strand, 30853377 - 30853311
Alignment:
Q  261 gtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||||| ||||||||| ||||||| | ||||| |||  ||||| |||||||||||||||    
T  30853377 gtctagtcttaccatacatccaacacaacatcttcatctccgctgcgcttattttattctcgtgttg 30853311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 327
Target Start/End: Original strand, 7092525 - 7092606
Alignment:
Q  246 ttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||||||  ||||| |||||||| |||||| | ||||||||| ||||| ||||  |||||||  |||||||||||    
T  7092525 ttctaatcatatcccttctagacttaccactcatccagcacaacatcctcatctctgctacacttacttgcttctcgtgttg 7092606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 25967568 - 25967621
Alignment:
Q  241 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 294  Q
    ||||||||||||| || |  |||||||||||||||||||||| |||||||||||    
T  25967568 gtcatttctaatcctaccatgtctagtcttaccacacatccatcgcaacatcct 25967621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 46583119 - 46583212
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||| | |||||||||||||||   || || |||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  46583119 aatggtgtcattcctaatcctatgctgtctagtcttaccacttctctaatgcaacatcctcatctctgctacacttacttgattctcatgttga 46583212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 1793447 - 1793355
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||| |||||| ||||| ||  |||||||||   |||||||| ||||||||| ||||| ||||  ||||||| ||||| ||||||    
T  1793447 aatggtgtcattcctaatcttatcccgttaagtcttaccgttcatccaacacaacatcctcatctccgctacacttacttgattctagtgttg 1793355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 41009645 - 41009737
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||| |||||||||||||| || |  |||||||||||||   |||||||||||||||||| || || ||||  ||||||| |||||| |||||    
T  41009645 aatgatgtcatttctaatcctaccatgtctagtcttaccgatcatccaacgcaacatcctcatttccgctacacttacttgattctcatgttg 41009737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 21106971 - 21106912
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 294  Q
    |||| |||||||||||||  ||||  |||||||||||||||||||| ||| |||||||||    
T  21106971 aatgttgtcatttctaattctatcacgtctagtcttaccacacatcgaacccaacatcct 21106912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 44860833 - 44860782
Alignment:
Q  243 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 294  Q
    ||||||||||| ||| |  ||||||||||||||||||||||| |||||||||    
T  44860833 catttctaatcttattccatctagtcttaccacacatccaacacaacatcct 44860782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 326
Target Start/End: Original strand, 45185312 - 45185403
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt 326  Q
    |||| |||||||||||||  ||||   ||||||||||| ||||||||||| ||| || || ||| | ||||  |||||||||||||||||||    
T  45185312 aatgttgtcatttctaattctatctcatctagtcttactacacatccaacacaatattcttatcaccgctacacttactttattctcgtgtt 45185403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 300
Target Start/End: Complemental strand, 25755297 - 25755239
Alignment:
Q  242 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 300  Q
    ||||||| |||||||||  |||||||||||||||||||| ||| |||||| || |||||    
T  25755297 tcatttccaatcatatcatgtctagtcttaccacacatctaacacaacattctcatctc 25755239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 28236172 - 28236078
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttgaa 329  Q
    |||||||||||| |||||| ||||   |||| ||||||||  ||||||| ||| |||| ||||||| ||||  ||||||| |||||| |||||||    
T  28236172 aatggtgtcattcctaatcctatcatatctaatcttaccattcatccaatgcagcatcataatctctgctacacttacttgattctcatgttgaa 28236078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 18966540 - 18966483
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 292  Q
    |||| |||||||| ||||| |||   ||||| ||||||||||||||||||||||||||    
T  18966540 aatgttgtcatttataatcctattttgtctaatcttaccacacatccaacgcaacatc 18966483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 27983187 - 27983094
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  || |||||||||||| |||| | | ||| ||||| ||||| ||||  ||||||||| |||| ||||||    
T  27983187 aatggtgtcattcctaatcctatcatgtatagtcttaccactcatctagcacaatatcctcatctccgctacacttactttactctcatgttga 27983094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 40933198 - 40933283
Alignment:
Q  242 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||  ||||  || | |||||||||||||| |||||||||||||| ||||  ||||  |||| |||| ||||||||||    
T  40933198 tcatttctaattctatcatgtattgtcttaccacacattcaacgcaacatcctcatctacgctacacttattttactctcgtgttg 40933283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 41192816 - 41192763
Alignment:
Q  240 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcc 293  Q
    |||||||| ||||  ||||| ||||| || ||||||||||||||||||||||||    
T  41192816 tgtcatttataattgtatcctgtctaatcataccacacatccaacgcaacatcc 41192763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 10209025 - 10208977
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaa 283  Q
    |||| |||||||||||||  |||||  ||||||||||||||||||||||    
T  10209025 aatgttgtcatttctaattctatcccatctagtcttaccacacatccaa 10208977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 17668406 - 17668462
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 291  Q
    |||| |||||||| ||||| ||||   |||||| |||||||||||||||||||||||    
T  17668406 aatgttgtcatttataatcttatctcatctagttttaccacacatccaacgcaacat 17668462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 327
Target Start/End: Original strand, 22421011 - 22421095
Alignment:
Q  243 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||  ||||  |||||||||  | ||||||||||||||||||||| |||||  ||| ||||| |||||| || |||||    
T  22421011 catttctaatattatctcgtctagtctctctacacatccaacgcaacatccttatctctactatgcttaatttattttcatgttg 22421095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 293
Target Start/End: Original strand, 49739115 - 49739147
Alignment:
Q  261 gtctagtcttaccacacatccaacgcaacatcc 293  Q
    |||||||||||||||||||| ||||||||||||    
T  49739115 gtctagtcttaccacacatctaacgcaacatcc 49739147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 7e-22; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 11593947 - 11593854
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  11593947 aatggtgtcattcctaatcttatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 11593854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 35906496 - 35906589
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  35906496 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 35906589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 31005210 - 31005117
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||| ||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  31005210 aatggtgttattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 31005117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 36651981 - 36651888
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||| | ||  ||||||| |||||| ||||||    
T  36651981 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgttacacttacttgattctcatgttga 36651888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 34869407 - 34869314
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| |||||  |||  ||||||| |||||| ||||||    
T  34869407 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctactacacttacttgattctcatgttga 34869314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 37617931 - 37617838
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||| ||| |||||| ||||||    
T  37617931 aatggtgtcattcctaatcctatcttgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttgcttgattctcatgttga 37617838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 327
Target Start/End: Complemental strand, 47848650 - 47848569
Alignment:
Q  246 ttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||| ||| ||||| |||||||||||||||||||||||| ||||||||| |||||  |||| |||| |||||||||||||||    
T  47848650 ttctgatcctatcccgtctagtcttaccacacatccaacacaacatcctcatctcccctagacttattttattctcgtgttg 47848569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 49029263 - 49029170
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| ||||||||| |||||||| ||||| ||||  ||||||| |||||| ||||||    
T  49029263 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgtaacatcctcatctctgctacacttacttgattctcatgttga 49029170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 326
Target Start/End: Original strand, 13859303 - 13859392
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt 326  Q
    |||||||||||| |||||| ||||  ||||||||||||||| | |||||||||||||||| ||||| ||||  ||||||| |||||||||||    
T  13859303 aatggtgtcattcctaatcctatcatgtctagtcttaccactcgtccaacgcaacatcctcatctctgcta--cttacttgattctcgtgtt 13859392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 36514500 - 36514592
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||| |||| ||||||||  ||||| || ||||||||||||||||||||||||||||||| ||||| ||||  |||| |||||| ||||||||    
T  36514500 aatgttgtcctttctaattctatcccgtttagtcttaccacacatccaacgcaacatcctcatctctgctacacttaatttattttcgtgttg 36514592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 327
Target Start/End: Complemental strand, 42187449 - 42187366
Alignment:
Q  243 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||| |||||| |||||||||||| ||||||||||| ||||||||| ||||| |||| ||||||| |||||| ||||||    
T  42187449 catttctaat-atatcccgtctagtcttactacacatccaacacaacatcctcatctccgctacgcttactctattcttgtgttg 42187366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 30200254 - 30200337
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttatt 318  Q
    |||| ||||||||||||||||||||  |||| |||||||||||||||||| ||||||||| ||||| ||||  |||| ||||||    
T  30200254 aatgttgtcatttctaatcatatcccatctaatcttaccacacatccaacacaacatcctcatctctgctacacttagtttatt 30200337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 235 - 321
Target Start/End: Complemental strand, 39811944 - 39811858
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctc 321  Q
    |||| |||||||||||||| ||||  ||||||||||||||||||||||| |||||||||| || || |||| ||||  |||||||||    
T  39811944 aatgttgtcatttctaatcctatcacgtctagtcttaccacacatccaaagcaacatcctcatatccgctacgcttgttttattctc 39811858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 327
Target Start/End: Original strand, 25579393 - 25579458
Alignment:
Q  262 tctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||| |||||||||||||||||||||||||| |||||  ||| ||||| |||||||||||||||    
T  25579393 tctagtattaccacacatccaacgcaacatcctcatctcctctacgcttattttattctcgtgttg 25579458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 33072941 - 33072848
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||| | ||||| ||||  |||| || |||||| ||||||    
T  33072941 aatggtgtcattcctaatcctatcttgtctagtcttaccactcatccaacgcaacatcatcatctctgctacacttatttgattctcatgttga 33072848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 33350101 - 33350194
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    ||||||||||||  ||||| ||||  ||||||||||||||| ||||||| |||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  33350101 aatggtgtcattcttaatcctatcatgtctagtcttaccactcatccaaggcaacatcctcatctctgctacacttacttgattctcatgttga 33350194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 36869584 - 36869677
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||| ||||||||||| |||||||| ||||||||| ||||| ||||  ||||||| |||| ||||||||    
T  36869584 aatggtgtcattcctaatcctatcatgtccagtcttaccactcatccaacacaacatcctcatctctgctacacttacttgattcacgtgttga 36869677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 39906665 - 39906730
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 300  Q
    |||||||||||| |||||| ||||| ||||||||||||||| ||||||||||| |||||| |||||    
T  39906665 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcagcatcctcatctc 39906730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 43282392 - 43282300
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||| |||||||||||||||||||  |||||| ||||||||||||| ||||||||||||| || || | |  ||||| |||||||| ||||||    
T  43282392 aatgttgtcatttctaatcatatcatgtctagacttaccacacatctaacgcaacatcctcatatccgttgtgcttaatttattcttgtgttg 43282300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 24549989 - 24550074
Alignment:
Q  242 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||||||| |  ||||||||||| ||||||||||| ||||||||| ||||| |||| || || |||||| | ||||||    
T  24549989 tcatttctaatcatattctatctagtcttacaacacatccaacacaacatcctcatctctgctacgcataatttatttttgtgttg 24550074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 46356152 - 46356209
Alignment:
Q  236 atggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcc 293  Q
    ||||||||||| |||||| ||||| ||||||||||||||| ||| |||||||||||||    
T  46356152 atggtgtcattcctaatcctatcctgtctagtcttaccactcattcaacgcaacatcc 46356209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 14593722 - 14593678
Alignment:
Q  261 gtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||    
T  14593722 gtctagtcttaccacacatccaacgcaacatcctcatctctgcta 14593678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 16013245 - 16013201
Alignment:
Q  261 gtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||    
T  16013245 gtctagtcttaccacacatccaacgcaacatcctcatctctgcta 16013201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 38606992 - 38606900
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||| ||||||| |||||| ||||  ||||||||||||||| |||||| ||||||||  | ||||| ||||  ||||||||| ||||||||||    
T  38606992 aatgttgtcattcctaatcctatcatgtctagtcttaccactcatccagcgcaacattatcatctccgctacacttactttactctcgtgttg 38606900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 45836775 - 45836867
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||| |||||| ||||  ||||| ||||||||| |||||| ||||||||||| ||||| |||   ||||||| | ||||||||||    
T  45836775 aatggtgtcattcctaatcctatcttgtctactcttaccactcatccagcgcaacatcctcatctccgctgcacttacttgactctcgtgttg 45836867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 29653849 - 29653904
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaaca 290  Q
    |||| |||||||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  29653849 aatgatgtcatttctaattctatcccgtctagtgttaccacacatccaacgcaaca 29653904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 327
Target Start/End: Complemental strand, 32630569 - 32630490
Alignment:
Q  248 ctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||| ||||  ||||||||||||||| |||||| | ||||||||| ||||| ||||  ||||||||| ||||||||||    
T  32630569 ctaatcctatcatgtctagtcttaccactcatccagctcaacatcctcatctccgctacacttactttactctcgtgttg 32630490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 40139211 - 40139270
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 294  Q
    |||| |||| ||||||||| ||||| ||||||||||||||||||||| || |||||||||    
T  40139211 aatgttgtcttttctaatcttatcccgtctagtcttaccacacatcccacacaacatcct 40139270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 240 - 327
Target Start/End: Original strand, 42177315 - 42177402
Alignment:
Q  240 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||||  |||||| | ||| | | || ||||| |||||| ||||||||    
T  42177315 tgtcatttctaatcaaatccagtatagtcttaccacatatccaacaaaacatctttatcactgttatgcttaatttattttcgtgttg 42177402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 28628228 - 28628317
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||| ||| ||||||||||  |||| || | ||||||||| |||||||| |||||||   |||||| |||| |||||||||||||||||||||    
T  28628228 aatgttgtaatttctaatcccatcccgtatggtcttaccatacatccaaggcaacat---aatctctgctacgcttactttattctcgtgttg 28628317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 43491295 - 43491225
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    |||||||||||| ||||||||||||  |||| ||||||| | |||||| | ||||||||| ||||||||||    
T  43491295 aatggtgtcattcctaatcatatcccatctaatcttaccgctcatccagcacaacatcctcatctcggcta 43491225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 44855467 - 44855537
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||| | ||||||||| ||||| ||||    
T  44855467 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccagcacaacatcctgatctctgcta 44855537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 7273023 - 7272934
Alignment:
Q  238 ggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||| |||||| ||||| || |||||||||| | |||||| | ||||||||| ||||| | ||  ||||||| ||||||||||||    
T  7273023 ggtgtcattcctaatcctatcccgtgtagtcttaccgctcatccagcacaacatcctcatctccggtacacttacttgattctcgtgttg 7272934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 43281663 - 43281582
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttacttta 316  Q
    |||||||||||| |||||| |||   ||||||||||||||| |||||| ||||||||||| ||| | ||||  |||||||||    
T  43281663 aatggtgtcattcctaatcctatattgtctagtcttaccactcatccagcgcaacatcctcatccccgctacacttacttta 43281582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 314
Target Start/End: Complemental strand, 1740777 - 1740705
Alignment:
Q  242 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactt 314  Q
    |||||||||||| || ||   |||||||||| ||||||||||||||||||||| ||||| ||||  |||||||    
T  1740777 tcatttctaatcttaccccacctagtcttactacacatccaacgcaacatcctcatctctgctacacttactt 1740705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 5335883 - 5335839
Alignment:
Q  261 gtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||    
T  5335883 gtctagtcttaccacacattcaacgcaacatcctcatctctgcta 5335839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 27022001 - 27022057
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 291  Q
    |||| |||||||| ||||| ||||| ||||||||||| ||||||||||| |||||||    
T  27022001 aatgttgtcatttttaatcctatcctgtctagtcttatcacacatccaatgcaacat 27022057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 35559289 - 35559353
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 299  Q
    |||||||||||| |||||| |||| | |||  ||||||||| |||||||||||||||||| ||||    
T  35559289 aatggtgtcattcctaatcctatcaaatctgatcttaccactcatccaacgcaacatcctcatct 35559353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 305
Target Start/End: Original strand, 28542206 - 28542248
Alignment:
Q  263 ctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||    
T  28542206 ctagtcttaccacacatccaacgcaacaccctcatctccgcta 28542248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 48736200 - 48736253
Alignment:
Q  241 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 294  Q
    ||||||||||||  ||||   |||||||||||||||||| ||||||||||||||    
T  48736200 gtcatttctaattttatctcatctagtcttaccacacattcaacgcaacatcct 48736253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 390
Target Start/End: Complemental strand, 2223127 - 2223079
Alignment:
Q  343 actttactttatctttcgttata-aaatagcttatacacaaacacttat 390  Q
    ||||| |||||||||| |||||| |||||||||||||| ||||||||||    
T  2223127 acttttctttatcttttgttatagaaatagcttatacataaacacttat 2223079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 8492528 - 8492580
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgca 287  Q
    ||||||||||||  ||||| ||||| |||||||||| |||| |||||||||||    
T  8492528 aatggtgtcattcgtaatcctatcccgtctagtcttgccactcatccaacgca 8492580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 36102060 - 36102116
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 291  Q
    |||| ||||||||||||||  ||||  ||||||||||||||||||| ||| ||||||    
T  36102060 aatgttgtcatttctaatctcatcccatctagtcttaccacacatcgaactcaacat 36102116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 291
Target Start/End: Complemental strand, 36136751 - 36136695
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 291  Q
    |||||||||||| |||| | |||||  |||||||||||||| |||||||| ||||||    
T  36136751 aatggtgtcattcctaaacctatcccttctagtcttaccacccatccaacacaacat 36136695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 7e-22; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 1210732 - 1210639
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  1210732 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 1210639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 696256 - 696164
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||| ||||||||||| ||||| ||||  ||||||||| ||||||||||    
T  696256 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccagcgcaacatcctcatctccgctacacttactttactctcgtgttg 696164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 8671907 - 8671814
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  8671907 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatccttatctctgctacacttacttgattctcatgttga 8671814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 9592721 - 9592628
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  9592721 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 9592628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 317
Target Start/End: Complemental strand, 26016415 - 26016342
Alignment:
Q  244 atttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttat 317  Q
    |||| |||| |||||| |||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||    
T  26016415 atttataattatatcctgtctagtcttaccacacatccaacgcaacatcctcatctctgctacgcttactttat 26016342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 30202425 - 30202518
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  30202425 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 30202518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 49347688 - 49347781
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||  ||||  ||||||| |||||| ||||||    
T  49347688 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctttgctacacttacttgattctcatgttga 49347781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 4379992 - 4379900
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||| |||||||||||||||||||   ||||||||||||||||||||||| ||||||||| ||||| |||| ||||  |||||| ||||||||    
T  4379992 aatgttgtcatttctaatcatatcttttctagtcttaccacacatccaacacaacatcctcatctcagctaagctttatttattttcgtgttg 4379900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 235 - 311
Target Start/End: Complemental strand, 9509305 - 9509229
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggctta 311  Q
    ||||||||||||||||||||||||| ||||||||||| ||| |||||||| ||||||||| ||||| |||| |||||    
T  9509305 aatggtgtcatttctaatcatatcctgtctagtcttatcactcatccaacacaacatcctcatctctgctacgctta 9509229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 9599689 - 9599781
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||| ||||||| |||||||||||| ||||||||||||||| |||||||| ||||||||| ||||| |||| |||||||| ||| | ||||||    
T  9599689 aatgatgtcattcctaatcatatcccgtctagtcttaccactcatccaacacaacatcctcatctctgctacgcttacttgattattgtgttg 9599781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 32083040 - 32083133
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| || || ||||||||||||||| |||||| ||||||||||| ||||| ||||  | ||||||| |||||||||||    
T  32083040 aatggtgtcattcctaatcctaccctgtctagtcttaccactcatccagcgcaacatcctcatctccgctacacatactttactctcgtgttga 32083133  T

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Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 15085921 - 15085829
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||| |||||| |||||  |||||||||||||| | |||| ||||||||||| ||||| ||||  ||||||||| ||||||||||    
T  15085921 aatggtgtcattcctaatcctatcctatctagtcttaccactcgtccagcgcaacatcctcatctccgctacacttactttactctcgtgttg 15085829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 8391759 - 8391666
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  || |||||||||||| |||||||| ||||||| | ||||| ||||  ||||||||| |||||||||||    
T  8391759 aatggtgtcattcctaatcctatcttgtgtagtcttaccactcatccaacacaacatcttcatctccgctacacttactttactctcgtgttga 8391666  T

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Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 22090081 - 22089988
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    ||||||||||||  ||||| ||||| ||||||||||||||| |||||||| || |||||| ||||| ||||  ||||||| |||||| ||||||    
T  22090081 aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacacagcatcctcatctctgctacacttacttgattctcatgttga 22089988  T

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Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 43240676 - 43240769
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    ||||| ||||||  ||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  43240676 aatggcgtcattcataatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 43240769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 51602045 - 51601952
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||||||||  ||||||||||||||| |||| ||||||||||||| || ||  |||  ||||||| |||||| ||||||    
T  51602045 aatggtgtcattcctaatcatatcatgtctagtcttaccactcatctaacgcaacatcctcatatctactacacttacttgattctcatgttga 51601952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 52442806 - 52442891
Alignment:
Q  242 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||| ||||  |||||||||||||||||||||||| ||||||||| || || |||| ||||| |||||| | ||||||    
T  52442806 tcatttctaatcttatcttgtctagtcttaccacacatccaacacaacatcctcatgtctgctacgcttaatttatttttgtgttg 52442891  T

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Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 327
Target Start/End: Original strand, 18469379 - 18469467
Alignment:
Q  239 gtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||| |||||||||||  ||||||||||||||| ||| ||||||| |||| | ||||| |||| | |||||| ||||||||||||    
T  18469379 gtgtcattcctaatcatatcatgtctagtcttaccactcatacaacgcagcatcgtcatctccgctacgtttacttgattctcgtgttg 18469467  T

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Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 32231249 - 32231342
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||| ||||||||| |||| | ||||||||||| |||||  |||  ||||||| |||||||||||||    
T  32231249 aatggtgtcattcctaatcctatcatgtctaatcttaccactcatctagcgcaacatcctcatctctactacacttacttgattctcgtgttga 32231342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 34792644 - 34792736
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||| ||||| |||||| ||||  ||||||||||||||| |||||| ||||||||||| ||||| ||||  ||| ||| |||||||||||||    
T  34792644 aatggtttcattcctaatcctatcatgtctagtcttaccactcatccagcgcaacatcctcatctctgctacactt-cttgattctcgtgttga 34792736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 51441060 - 51441153
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| | ||||| |||||||||| ||||| ||||  || |||| |||||| ||||||    
T  51441060 aatggtgtcattcctaatcctatcatgtctagtcttaccactcgtccaatgcaacatcctcatctctgctacactcacttgattctcatgttga 51441153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 4001750 - 4001841
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| |||   ||||||||||||||| |||| | ||||||||||| ||||  ||||  ||||||||| |||||||||||    
T  4001750 aatggtgtcattcctaatcctattttgtctagtcttaccactcatctagcgcaacatcctcatcttcgcta--cttactttactctcgtgttga 4001841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 327
Target Start/End: Original strand, 46226603 - 46226669
Alignment:
Q  261 gtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||| ||||| |||||||||||||||| | ||||| ||||  ||||||| ||||||||||||    
T  46226603 gtctagtctcaccactcatccaacgcaacatcatcatctccgctaaacttacttgattctcgtgttg 46226669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 1661406 - 1661321
Alignment:
Q  242 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||| ||||   |||||||||| || |||| |||| ||||||| | ||||| |||| ||||| |||||||||||||||    
T  1661406 tcatttctaatcctatcacatctagtcttatcagacattcaacacaacatcttcatctctgctatgcttattttattctcgtgttg 1661321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 19936506 - 19936417
Alignment:
Q  238 ggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||| ||| || |||||  |||||||||||||| |||||||| |||||| || ||||| |||| ||||| || |||||| |||||    
T  19936506 ggtgtcattcctattcctatcccatctagtcttaccactcatccaacacaacattctcatctccgctatgcttatttgattctcatgttg 19936417  T

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Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 37463166 - 37463231
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 300  Q
    |||||||||||| |||||| || || ||||||||||||||| ||||||| | |||||||| |||||    
T  37463166 aatggtgtcattcctaatcctaacctgtctagtcttaccactcatccaatgaaacatcctcatctc 37463231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 324
Target Start/End: Original strand, 38807970 - 38808058
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtg 324  Q
    ||||||||||||||||||  ||||| |||| ||||||||||  ||||||| ||||||||| || || || | |||||||| |||||||||    
T  38807970 aatggtgtcatttctaattctatcccgtctggtcttaccac-tatccaacacaacatcctcatatccgccacgcttacttaattctcgtg 38808058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 16273115 - 16273171
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 291  Q
    |||| ||||||||||||||  |||   ||||||||||||||||||||||||||||||    
T  16273115 aatgttgtcatttctaatctcatctcatctagtcttaccacacatccaacgcaacat 16273171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 43423700 - 43423645
Alignment:
Q  241 gtcatttctaatcatatccagtctagtcttacc--acacatccaacgcaacatcct 294  Q
    ||||||||||||| ||||| |||||||||| ||  |||||||||||||||||||||    
T  43423700 gtcatttctaatcctatcctgtctagtcttcccccacacatccaacgcaacatcct 43423645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 52561906 - 52561946
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccac 275  Q
    |||||||||||| |||||||||||| |||||||||||||||    
T  52561906 aatggtgtcattcctaatcatatcccgtctagtcttaccac 52561946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 34827403 - 34827462
Alignment:
Q  241 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 300  Q
    ||||||||||||| |||   ||||||||||||||| |||||||| ||||||||| |||||    
T  34827403 gtcatttctaatcttatatcgtctagtcttaccactcatccaacacaacatcctcatctc 34827462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 4590824 - 4590878
Alignment:
Q  240 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 294  Q
    |||||||||||||| ||||  ||||||||| ||| ||||| ||||||||||||||    
T  4590824 tgtcatttctaatcctatcttgtctagtctcaccgcacattcaacgcaacatcct 4590878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 318
Target Start/End: Complemental strand, 15577406 - 15577328
Alignment:
Q  240 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttatt 318  Q
    |||||||| |||||| |||| ||||||||||||| |||||||||| | ||||  | ||||| |||| ||||| ||||||    
T  15577406 tgtcatttataatcacatcccgtctagtcttaccgcacatccaacacgacatgatcatctctgctaagcttaatttatt 15577328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 16822319 - 16822373
Alignment:
Q  240 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 294  Q
    |||||||||||||| ||||   |||||| |||||||||||||||| |||||||||    
T  16822319 tgtcatttctaatcctatcttatctagtattaccacacatccaacacaacatcct 16822373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 17815456 - 17815403
Alignment:
Q  240 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 294  Q
    |||||||||||||  ||||| ||||||||| |||||||||||||| |||||||||    
T  17815456 tgtcatttctaatgctatcccgtctagtct-accacacatccaacacaacatcct 17815403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 419
Target Start/End: Original strand, 34619476 - 34619546
Alignment:
Q  350 tttatctttcgttata-aaatagcttatacacaaacacttatggtataaagtgcaaattaagctgtttatc 419  Q
    ||||||||| |||||| |||| ||||||||| || || ||||| |||||  ||||||||||||||||||||    
T  34619476 tttatcttttgttatagaaatggcttatacataagcaattatgctataagctgcaaattaagctgtttatc 34619546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 52633467 - 52633556
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgt 325  Q
    |||| ||||||||||| || ||||   |||||||||||| ||||| |||||||||||||| |||||  | |  ||||||||||||||||||    
T  52633467 aatgttgtcatttctagtcttatcacatctagtcttaccgcacattcaacgcaacatcctcatctccac-acacttactttattctcgtgt 52633556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 16142179 - 16142228
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaac 284  Q
    ||||||| |||| || ||| ||||| ||||||||||||||||||||||||    
T  16142179 aatggtggcattcctgatcctatcccgtctagtcttaccacacatccaac 16142228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 18793303 - 18793340
Alignment:
Q  255 tatccagtctagtcttaccacacatccaacgcaacatc 292  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  18793303 tatcctgtctagtctttccacacatccaacgcaacatc 18793340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 19908665 - 19908718
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaa 288  Q
    |||| ||||||| | |||||||||  |||||||||||| |||||||||||||||    
T  19908665 aatgttgtcattacaaatcatatcatgtctagtcttacaacacatccaacgcaa 19908718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 6025585 - 6025545
Alignment:
Q  242 tcatttctaatcatatccagtctagtcttaccacacatcca 282  Q
    |||||||||||| |||||||||||||||| ||| |||||||    
T  6025585 tcatttctaatcttatccagtctagtcttgccaaacatcca 6025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 40419626 - 40419534
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||| |||||||||||||  ||||   |||||| |||||| |||| ||||||| |||||| ||||| ||||  ||||||||||  ||||||||    
T  40419626 aatgttgtcatttctaattctatctcatctagttttaccatacattcaacgcaccatcctcatctctgctacacttactttatgttcgtgttg 40419534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 40920841 - 40920889
Alignment:
Q  244 atttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 292  Q
    |||||||||| ||||  ||||| ||||||||||||||||| ||||||||    
T  40920841 atttctaatcctatctcgtctaatcttaccacacatccaatgcaacatc 40920889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 608146 - 608054
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||| |||||| |||||  |||||||||||||| ||||||||| |||||||| ||||| ||||  ||||||||||||||||||||    
T  608146 aatggtgtcattcctaatcctatcctatctagtcttaccactcatccaacggaacatcctcatctccgctacacttactttattctcgtgttg 608054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 5631805 - 5631713
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||| |||||||||||| ||||||||||||||| |||||||| ||||||||| ||||  ||||  ||||||||| ||||| ||||    
T  5631805 aatggtgtcattcctaatcatatccggtctagtcttaccactcatccaacacaacatcctcatcttcgctacacttactttactctcgcgttg 5631713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 9594007 - 9594077
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||| ||||    
T  9594007 aatggtgtcattcctaatcctatcccgtctagtcttaccactcatccaacgcaacatcctcatctccgcta 9594077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 14030794 - 14030700
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtctta-ccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||| ||||||||||| |||| |||||| ||||||||||| ||||| ||||  ||||||||| |||||||||||    
T  14030794 aatggtgtcattcctaatcctatcctgtctagtcttaaccactcatccatcgcaacatcctcatctctgctacacttactttactctcgtgttga 14030700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 9706763 - 9706670
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| ||||||  |||||||||| ||||| ||||  ||||||||| |||||||||||    
T  9706763 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccagtgcaacatcctcatctccgctacacttactttactctcgtgttga 9706670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 28085363 - 28085270
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    ||||||||||||  ||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  28085363 aatggtgtcattcgtaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 28085270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 323
Target Start/End: Original strand, 10100152 - 10100240
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgt 323  Q
    |||||||||||||||||||||||   ||||||||||||||| |||| ||||||||||||| ||||| ||||  ||||||| | ||||||    
T  10100152 aatggtgtcatttctaatcatatattgtctagtcttaccactcatctaacgcaacatcctcatctccgctacacttacttgactctcgt 10100240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 30031243 - 30031151
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||| ||||||||||| ||||| ||||||||||||||| |||||||| ||||| ||| ||||| ||||  || |||| |||||| |||||    
T  30031243 aatggtgacatttctaatcctatcccgtctagtcttaccactcatccaacacaacaacctcatctccgctacactaacttgattctcatgttg 30031151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 241 - 317
Target Start/End: Complemental strand, 33084039 - 33083963
Alignment:
Q  241 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttat 317  Q
    ||||||||||||  |||||  |||||||||||||||||||||||||| |||||| || || |||| |||||||||||    
T  33084039 gtcatttctaattctatcccatctagtcttaccacacatccaacgcagcatcctcatttctgctacgcttactttat 33083963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 241 - 317
Target Start/End: Original strand, 33998305 - 33998381
Alignment:
Q  241 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttat 317  Q
    ||||||||||||| ||||   ||||||||||||||||||||||||||||||| | ||||| |||| ||||| |||||    
T  33998305 gtcatttctaatcctatcacatctagtcttaccacacatccaacgcaacatcttcatctctgctacgcttaatttat 33998381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 9568647 - 9568585
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaat 297  Q
    |||| |||||||| ||||  ||||  |||||||||||||||||||||||||||||||||||||    
T  9568647 aatgttgtcatttataattctatcatgtctagtcttaccacacatccaacgcaacatcctaat 9568585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 4948628 - 4948672
Alignment:
Q  261 gtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||    
T  4948628 gtctagtcttaccacacatccaaagcaacatcctaatctccgcta 4948672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 4955599 - 4955643
Alignment:
Q  261 gtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||    
T  4955599 gtctagtcttaccacacatccaaagcaacatcctaatctccgcta 4955643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 6056065 - 6056157
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||||  |||||| ||||  |||||||||||||| |||||||||||||||||  || ||  ||| |||||||| ||| ||||||||    
T  6056065 aatggtgtcattcttaatcacatcctttctagtcttaccactcatccaacgcaacatccgcatttctactacgcttacttgattttcgtgttg 6056157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 20427931 - 20428023
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||| |||||| ||||| |||| ||| |||||| |||||| ||||||||||| ||||| ||||  |||| || | ||||||||||    
T  20427931 aatggtgtcattcctaatcctatcctgtcttgtcctaccactcatccagcgcaacatcctcatctccgctacacttatttgactctcgtgttg 20428023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 6293678 - 6293740
Alignment:
Q  249 taatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggctta 311  Q
    |||||||||| |||||| | |||||||||||||||| ||||||||| ||||| |||| |||||    
T  6293678 taatcatatctagtctaattttaccacacatccaacacaacatcctcatctctgctatgctta 6293740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 32755906 - 32755836
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    |||||||||||| |||||  ||||  ||||||||||||||| |||||||| ||||||||| ||||| ||||    
T  32755906 aatggtgtcattcctaatattatcatgtctagtcttaccactcatccaacacaacatcctcatctctgcta 32755836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 2079286 - 2079229
Alignment:
Q  269 ttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt 326  Q
    |||||||||||||||| ||||||| | ||||| |||| ||||| ||||||||||||||    
T  2079286 ttaccacacatccaacacaacatcatcatctccgctacgcttattttattctcgtgtt 2079229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 327
Target Start/End: Original strand, 5258448 - 5258537
Alignment:
Q  238 ggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||  ||||| ||||  ||||||||||||||| ||||||||||||||| || | ||| ||||  ||||||||  ||||||||||    
T  5258448 ggtgtcattcataatcctatcttgtctagtcttaccactcatccaacgcaacattctcacctccgctacacttactttgctctcgtgttg 5258537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 7513283 - 7513335
Alignment:
Q  240 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 292  Q
    ||||||||| |||| ||||   |||||||||||||||||||||||||||||||    
T  7513283 tgtcatttcaaatcttatctcatctagtcttaccacacatccaacgcaacatc 7513335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 326
Target Start/End: Original strand, 12134227 - 12134287
Alignment:
Q  266 gtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt 326  Q
    ||||| ||||||||||||| |||||| || ||||| |||| ||||| ||||||||||||||    
T  12134227 gtcttgccacacatccaacacaacattctcatctctgctatgcttagtttattctcgtgtt 12134287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 327
Target Start/End: Original strand, 28027126 - 28027212
Alignment:
Q  241 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||| |||||| ||| |  |||||||||||||| ||||||||  ||||||||  |||| |||| |||||||| |||||| |||||    
T  28027126 gtcattcctaatcctatgccatctagtcttaccactcatccaacataacatcctcgtctctgctatgcttacttgattctcatgttg 28027212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 546980 - 546927
Alignment:
Q  241 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 294  Q
    ||||||| ||||||||||   |||||| ||| ||||||||||||||||||||||    
T  546980 gtcatttttaatcatatcttatctagttttatcacacatccaacgcaacatcct 546927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 305
Target Start/End: Original strand, 7513686 - 7513751
Alignment:
Q  240 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    ||||||||||||| |||||  ||||||||||||||||||  ||| |||||||| | ||||| ||||    
T  7513686 tgtcatttctaattatatcgcgtctagtcttaccacacactcaaggcaacatctttatctctgcta 7513751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 290
Target Start/End: Original strand, 14389483 - 14389511
Alignment:
Q  262 tctagtcttaccacacatccaacgcaaca 290  Q
    |||||||||||||||||||||||||||||    
T  14389483 tctagtcttaccacacatccaacgcaaca 14389511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 33496171 - 33496079
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||||||||||| |||||  | || ||||||||  ||||||| |||||||| | ||||| | ||  ||||||| |||||| |||||    
T  33496171 aatggtgtcatttctaatcttatcctatttaatcttaccattcatccaatgcaacatcatcatctccgttacacttacttgattctcatgttg 33496079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 25740 - 25833
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||| ||||||||||||||| ||||  ||||||| |||||| ||||||    
T  25740 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacacaacatcctaatctctgctacacttacttgattctcatgttga 25833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 39946844 - 39946751
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    ||||||||||||  ||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||||||||||    
T  39946844 aatggtgtcattcataatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcgtgttga 39946751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 36395245 - 36395315
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||| ||||    
T  36395245 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgcta 36395315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 321
Target Start/End: Original strand, 36565536 - 36565622
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctc 321  Q
    |||||||||||| |||||| ||||| ||||||||||||||| ||||||||||| |||||| ||||| ||||  ||||||| ||||||    
T  36565536 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcatcatcctcatctctgctacacttacttgattctc 36565622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 36545134 - 36545041
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||| ||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  36545134 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacacaacatcctcatctctgctacacttacttgattctcatgttga 36545041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 15215566 - 15215658
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||||||||||| ||||| || |||||||||||| |||||| | ||||||||| ||||| |||   ||||||||| ||||||||||    
T  15215566 aatggtgtcatttctaatcctatcctgtatagtcttaccactcatccagcacaacatcctcatctccgcttcacttactttactctcgtgttg 15215658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 29520647 - 29520583
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 299  Q
    |||||| |||||||||||| |||||  ||||||||||||||||||||||||||||||||| ||||    
T  29520647 aatggtatcatttctaatcctatcccatctagtcttaccacacatccaacgcaacatcctcatct 29520583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 235 - 321
Target Start/End: Complemental strand, 40813309 - 40813223
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctc 321  Q
    ||||||||||||  ||||| |||   ||||||||||||||| |||||||| ||||||||||||||| ||||  ||||||||||||||    
T  40813309 aatggtgtcattcttaatcctattatgtctagtcttaccactcatccaacacaacatcctaatctctgctacacttactttattctc 40813223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 37077752 - 37077660
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||| |||||| ||||  ||||||| ||||||| |||||| ||||||||||| ||||| || |  ||||||| ||||||||||||    
T  37077752 aatggtgtcattcctaatcctatctcgtctagttttaccactcatccagcgcaacatcctcatctccgccacacttacttgattctcgtgttg 37077660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 290
Target Start/End: Complemental strand, 32043577 - 32043522
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaaca 290  Q
    |||| |||||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  32043577 aatgttgtcatttctaattctatcccgtctagtcttaccacacatccaacgcaaca 32043522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 36069630 - 36069571
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 294  Q
    |||| |||| ||||||||| ||||| |||||||||||||||||||||||| |||||||||    
T  36069630 aatgttgtcgtttctaatcttatcccgtctagtcttaccacacatccaacacaacatcct 36069571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 12492137 - 12492230
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    ||||||||||||  ||||| ||||  ||||||||||||||| |||||||||||||||||| || || ||||  ||||| | |||||| ||||||    
T  12492137 aatggtgtcattcataatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatatctgctacacttacatgattctcatgttga 12492230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 327
Target Start/End: Original strand, 45512818 - 45512883
Alignment:
Q  262 tctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| ||||| |||||| ||||||||    
T  45512818 tctagtcttaccacacatccaacgaaacattctcatctccgctatgcttattttattttcgtgttg 45512883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 2796544 - 2796449
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtcta--gtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||  |||||  |||||||||| |||||| ||||||||||| ||||  ||||  ||||||| |||||||||||||    
T  2796544 aatggtgtcattcctaatcctatcatgtctatagtcttaccactcatccagcgcaacatcctcatctttgctacacttacttgattctcgtgttga 2796449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 13171949 - 13172009
Alignment:
Q  240 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 300  Q
    |||||||||||||| ||||| |||||||||||| |||||||||| ||||||| || |||||    
T  13171949 tgtcatttctaatcctatcccgtctagtcttactacacatccaatgcaacattctcatctc 13172009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 326
Target Start/End: Complemental strand, 16917171 - 16917080
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt 326  Q
    |||| |||||||| ||||| ||||||| | |||||||||||| |  ||||||||||| || ||||| |||| ||||| |||||| |||||||    
T  16917171 aatgttgtcatttttaatcctatccagccgagtcttaccacaaagtcaacgcaacattctcatctctgctatgcttaatttattttcgtgtt 16917080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 244 - 327
Target Start/End: Original strand, 39953568 - 39953651
Alignment:
Q  244 atttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||| |||||  || || ||||||||||||||||||||||||| || ||||| |||| ||| |||||||  ||||||||    
T  39953568 atttctaattatatcatgtttaatcttaccacacatccaacgcaacattctcatctctgctacgctaactttatgttcgtgttg 39953651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 327
Target Start/End: Original strand, 42854300 - 42854391
Alignment:
Q  236 atggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||| |||||| ||| | |||||||||||||||  ||||| ||||||||| | ||||| ||||  || |||||| ||||||||||    
T  42854300 atggtgtcattcctaatcctattctgtctagtcttaccacttatccagcgcaacatcgtcatctccgctacactaactttactctcgtgttg 42854391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 6510721 - 6510778
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 292  Q
    ||||||||||||||||||||||||   ||||||||||||||  ||||||| |||||||    
T  6510721 aatggtgtcatttctaatcatatctcatctagtcttaccacttatccaacacaacatc 6510778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 10080200 - 10080257
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 292  Q
    |||| |||||||||||||| ||||  |||||||||||||| ||| |||||||||||||    
T  10080200 aatgttgtcatttctaatcttatctcgtctagtcttaccaaacacccaacgcaacatc 10080257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 30783335 - 30783400
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 300  Q
    |||| |||||||||||||| |||||  ||||||||| ||||| ||||||||||| ||||| |||||    
T  30783335 aatgttgtcatttctaatcctatcctatctagtcttgccacagatccaacgcaagatcctcatctc 30783400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 44681334 - 44681387
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaa 288  Q
    |||| |||||||||||||| ||||  ||||||||||||||||||||||| ||||    
T  44681334 aatgttgtcatttctaatcttatctcgtctagtcttaccacacatccaatgcaa 44681387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 45419226 - 45419169
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 292  Q
    |||||||||||| |||||| |||||  ||||||||||||||  |||||||||||||||    
T  45419226 aatggtgtcattcctaatcttatcccttctagtcttaccactaatccaacgcaacatc 45419169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 10824464 - 10824512
Alignment:
Q  244 atttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 292  Q
    ||||||||||||||||  |||||||||||||||| ||||| ||||||||    
T  10824464 atttctaatcatatcccatctagtcttaccacacgtccaatgcaacatc 10824512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 13986481 - 13986389
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||| ||||||| ||||| |||||  ||||||| ||||||| ||||||  | |||||||| ||||| |||| |||||| | ||||||||||||    
T  13986481 aatgatgtcattcctaattatatctcgtctagtattaccactcatccagtgtaacatcctcatctccgctatgcttacctgattctcgtgttg 13986389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 18125162 - 18125070
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||||||||||| ||||  |||| |||||  ||| |||||| |||||||| || ||||| ||||  ||||||| |||||| |||||    
T  18125162 aatggtgtcatttctaatcctatcatgtctcgtcttgtcactcatccagcgcaacatgctcatctccgctacacttacttgattctcatgttg 18125070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 28300407 - 28300471
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 299  Q
    |||| |||||||||||||| ||||   ||||||||||| ||||||||||| ||||||||| ||||    
T  28300407 aatgttgtcatttctaatcttatctcatctagtcttactacacatccaacacaacatcctcatct 28300471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 30748446 - 30748354
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||| |||||||||||||| ||||  ||||| ||| ||||||||||||||| |||||||| || || |||| || || |||||| || |||||    
T  30748446 aatgttgtcatttctaatcctatcatgtctaatctaaccacacatccaacgaaacatcctcatatctgctacgcctaatttattatcatgttg 30748354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 291
Target Start/End: Original strand, 2518691 - 2518742
Alignment:
Q  240 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 291  Q
    |||||||||||||| ||||   |||||||||||||||||||||| |||||||    
T  2518691 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 2518742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 305
Target Start/End: Original strand, 30456537 - 30456576
Alignment:
Q  266 gtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  30456537 gtcttaccacacatccaacgcaacatcctcatctctgcta 30456576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 327
Target Start/End: Complemental strand, 29735767 - 29735701
Alignment:
Q  261 gtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||||||  |||||||| ||||||||| |||||  ||| ||||| || ||||||||||||    
T  29735767 gtctagtcttaccattcatccaacacaacatcctcatctccactacgcttatttcattctcgtgttg 29735701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 327
Target Start/End: Complemental strand, 36143346 - 36143264
Alignment:
Q  245 tttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||| ||||   ||||||||||||||||  ||||| ||||||||| ||||| |||| | | | |||||||||||||||    
T  36143346 tttctaatcctatctcatctagtcttaccacacgaccaacacaacatcctcatctctgctacgttgattttattctcgtgttg 36143264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 16351377 - 16351320
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 292  Q
    |||| ||||||||||||   ||| | |||||||||||||||| |||||||||||||||    
T  16351377 aatgttgtcatttctaactctattccgtctagtcttaccacatatccaacgcaacatc 16351320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 311
Target Start/End: Complemental strand, 33511340 - 33511271
Alignment:
Q  242 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggctta 311  Q
    |||||||||||||||||   | ||||||||||||||||| | ||||||||||| || || |||| |||||    
T  33511340 tcatttctaatcatatctcatatagtcttaccacacatcaagcgcaacatcctcatttctgctatgctta 33511271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 327
Target Start/End: Complemental strand, 43732527 - 43732462
Alignment:
Q  262 tctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||||||||||||||| |||||||| || || |||| || ||  ||||||| ||||||    
T  43732527 tctagtcttaccacacatccaacgtaacatcctcatttctgctacgcatatcttattcttgtgttg 43732462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 44681386 - 44681435
Alignment:
Q  250 aatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 299  Q
    |||||||| | |||||||||||||||||||||||  ||||||||| ||||    
T  44681386 aatcatattccgtctagtcttaccacacatccaatacaacatcctcatct 44681435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 18752168 - 18752260
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||  |||||| |||   ||||||||||| ||| ||| || |||||||| || ||||| ||||  ||||||||| ||||||||||    
T  18752168 aatggtgtcatccctaatcctattatgtctagtcttaacactcattcagcgcaacattctcatctccgctacacttactttactctcgtgttg 18752260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 21121145 - 21121105
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccac 275  Q
    ||||||| ||||||||||| ||||| |||||||||||||||    
T  21121145 aatggtgccatttctaatcctatcccgtctagtcttaccac 21121105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 1275252 - 1275159
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| || |  ||||||||||||||| |||||||||||||||||| ||||| |||| |||||||| |||||| ||||||    
T  1275252 aatggtgtcattcctaatcctaccatgtctagtcttaccactcatccaacgcaacatcctcatctctgctatgcttacttgattctcatgttga 1275159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 10639284 - 10639191
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||| | ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  10639284 aatggtgtcattcctaatcctattctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 10639191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 12492682 - 12492775
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||| ||||||||||||||| ||||||||| |||||||| ||||| ||||  ||||||| |||||| ||||||    
T  12492682 aatggtgtcattcctaatcttatcctgtctagtcttaccactcatccaacgtaacatcctcatctctgctacacttacttgattctcatgttga 12492775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 1287884 - 1287977
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||| ||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  1287884 aatgatgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 1287977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 16347673 - 16347765
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||| |||||| |||||||||   ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| | ||||||||||    
T  16347673 aatggtttcatttttaatcatatattgtctagtcttaccactcatccaacgcaacatcctcatctccgctacacttacttaactctcgtgttg 16347765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 2075769 - 2075862
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||| ||||||| |||||| ||||  |||||||||||| || |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  2075769 aatgttgtcattcctaatcctatcttgtctagtcttacaactcatccaacgcaacatcctcatctctgctacacttacttaattctcatgttga 2075862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 24178497 - 24178404
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    ||||||||||||  ||||| ||||  || |||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  24178497 aatggtgtcattcttaatcctatcatgtatagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 24178404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 21952338 - 21952274
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 299  Q
    |||| |||||||||||||| ||||  ||||||||||||||||||| |||||||||||||| ||||    
T  21952338 aatgctgtcatttctaatcttatctcgtctagtcttaccacacatgcaacgcaacatcctcatct 21952274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 7678467 - 7678402
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 300  Q
    |||| |||||||||||||| |||||  ||||||||| ||||| ||||||||||||||||| |||||    
T  7678467 aatgttgtcatttctaatcctatcctatctagtcttgccacagatccaacgcaacatcctcatctc 7678402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 20318969 - 20318881
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||||||||     |||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  20318969 aatggtgtcattcctaatcctatccagtct-----taccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 20318881  T

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Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 34194799 - 34194856
Alignment:
Q  243 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 300  Q
    ||||||||||| ||||| ||||||| |||||||||||||||| |||||||||| ||||    
T  34194799 catttctaatcctatcctgtctagttttaccacacatccaacacaacatcctattctc 34194856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 291
Target Start/End: Complemental strand, 9235056 - 9235000
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 291  Q
    |||| |||||||| ||||| ||||| ||||||||||||||||||||||| |||||||    
T  9235056 aatgttgtcatttataatcctatcccgtctagtcttaccacacatccaatgcaacat 9235000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 326
Target Start/End: Complemental strand, 5305603 - 5305512
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt 326  Q
    |||| ||| |||||||||  ||||  |||||||||||||||||||||||||||||||||   |||  ||||  |||| ||||||||||||||    
T  5305603 aatgttgttatttctaattctatcttgtctagtcttaccacacatccaacgcaacatccccgtctttgctattcttattttattctcgtgtt 5305512  T

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Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 300
Target Start/End: Complemental strand, 27998384 - 27998345
Alignment:
Q  261 gtctagtcttaccacacatccaacgcaacatcctaatctc 300  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  27998384 gtctagtcttaccacacatccaacgcaacatcctcatctc 27998345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 240 - 327
Target Start/End: Complemental strand, 30588435 - 30588348
Alignment:
Q  240 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||||||||||   | |  ||||||||||||||| ||||||||||||  ||||  ||| ||||| |||||||||||||||    
T  30588435 tgtcatttctaatcatatctcatttgatcttaccacacatcccacgcaacatccttgtctccactatgcttattttattctcgtgttg 30588348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 11002716 - 11002786
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 305  Q
    |||| |||||||||||||  |||||  ||| ||||||||||||||||| ||||||||||| ||||| ||||    
T  11002716 aatgttgtcatttctaattctatcccatctcgtcttaccacacatccagcgcaacatcctcatctctgcta 11002786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 327
Target Start/End: Complemental strand, 21093736 - 21093671
Alignment:
Q  262 tctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    |||||||||||||||||| |||||||||||||| || ||  |||  |||| |||||||||||||||    
T  21093736 tctagtcttaccacacatacaacgcaacatcctcatatccactacacttattttattctcgtgttg 21093671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 28186963 - 28187028
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 300  Q
    |||| |||||||||||||| || |  ||||||||||||||||||||||| ||||||| || |||||    
T  28186963 aatgttgtcatttctaatcctaccatgtctagtcttaccacacatccaatgcaacattctcatctc 28187028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 28977152 - 28977245
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    |||||||||||| |||||| ||||   |||||| ||||||| |||||||| |||||| || ||||| ||||  ||||||| |||||| ||||||    
T  28977152 aatggtgtcattcctaatcctatcatttctagttttaccactcatccaacacaacatactcatctctgctacacttacttgattctcatgttga 28977245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 320
Target Start/End: Complemental strand, 32516545 - 32516460
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattct 320  Q
    |||| ||||||||||||   ||||| |||||||||||||||||||||||| ||||||| | ||||| | || |  |||||||||||    
T  32516545 aatgttgtcatttctaagtctatcctgtctagtcttaccacacatccaacacaacatcatcatctccgttacgtgtactttattct 32516460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 34272988 - 34272923
Alignment:
Q  256 atccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctc 321  Q
    |||| ||||||||||||||| ||||||| |||||||||| ||||| ||||  ||||||| ||||||    
T  34272988 atcctgtctagtcttaccactcatccaatgcaacatcctcatctctgctacacttacttgattctc 34272923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 36200764 - 36200683
Alignment:
Q  240 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctc 321  Q
    ||||||| |||||| |||||  | |||||||||| | |||||||||||||||||| ||||| | || |||||||| ||||||    
T  36200764 tgtcattcctaatcttatcctatttagtcttaccgctcatccaacgcaacatcctcatctctgatacgcttacttgattctc 36200683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 43558135 - 43558168
Alignment:
Q  261 gtctagtcttaccacacatccaacgcaacatcct 294  Q
    ||||||||||||||||||||||||||||||||||    
T  43558135 gtctagtcttaccacacatccaacgcaacatcct 43558168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 6888975 - 6888931
Alignment:
Q  240 tgtcatttctaatcatatccagtctagtcttaccacacatccaac 284  Q
    |||||||||||||||||||   |||||||||||||||||||||||    
T  6888975 tgtcatttctaatcatatctcatctagtcttaccacacatccaac 6888931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 26884984 - 26885040
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 291  Q
    |||||||| ||| |||||| ||||| ||||||| ||||||| |||||||||||||||    
T  26884984 aatggtgttattcctaatcctatcccgtctagttttaccactcatccaacgcaacat 26885040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 4496368 - 4496310
Alignment:
Q  238 ggtgtcatttctaatcatatccagt--ctagtcttaccacacatccaacgcaacatcct 294  Q
    ||||||||| |||||| ||||| ||  ||||||||||||| ||||||||||||||||||    
T  4496368 ggtgtcattcctaatcctatcctgtgtctagtcttaccactcatccaacgcaacatcct 4496310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 6368220 - 6368279
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 294  Q
    |||| |||||||||||||  ||||  ||||| |||||||||||||| |||||||||||||    
T  6368220 aatgttgtcatttctaattctatctcgtctattcttaccacacatctaacgcaacatcct 6368279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 5848401 - 5848462
Alignment:
Q  265 agtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt 326  Q
    ||||||||||||||||||| |||||||||| ||||| ||||  |||| |||| |||| ||||    
T  5848401 agtcttaccacacatccaatgcaacatcctcatctctgctacacttattttactctcatgtt 5848462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 311
Target Start/End: Original strand, 10083041 - 10083109
Alignment:
Q  242 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggctta 311  Q
    |||||||||||  ||||| ||||||||||||||||||| ||| |||||||||| ||| | |||| |||||    
T  10083041 tcatttctaattctatcccgtctagtcttaccacacat-caaagcaacatcctcatccctgctacgctta 10083109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 17340732 - 17340797
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 300  Q
    |||||||||||| ||||||| ||    |||||| ||||||| |||||||||||||||||| |||||    
T  17340732 aatggtgtcattcctaatcacatttcttctagttttaccactcatccaacgcaacatccttatctc 17340797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 325
Target Start/End: Original strand, 41110041 - 41110126
Alignment:
Q  240 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgt 325  Q
    |||||||||||||| ||| |  |||||||| || ||||||||| ||||||||  | ||||  |||| ||||| |||||||||||||    
T  41110041 tgtcatttctaatcctattccatctagtctcactacacatccagcgcaacattttcatctttgctacgcttattttattctcgtgt 41110126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 27880 - 27789
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||||  ||||||||||  || |||| ||||||| |||| || |||||||||| ||||| | || |||||||| |||||| |||||    
T  27880 aatggtgtcattcataatcatatcttgt-tagttttaccactcatctaatgcaacatcctcatctccgttatgcttacttaattctcatgttg 27789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 315
Target Start/End: Complemental strand, 3301831 - 3301751
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttacttt 315  Q
    ||||||| |||| |||||| ||||  ||||||||||||||| |||| | ||||||||||  ||||| ||||  ||||||||    
T  3301831 aatggtgacattcctaatcctatcatgtctagtcttaccactcatcaagcgcaacatccccatctccgctacacttacttt 3301751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 390
Target Start/End: Original strand, 4991042 - 4991082
Alignment:
Q  351 ttatctttcgttataaaa-tagcttatacacaaacacttat 390  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  4991042 ttatcttttgttataaaaatagcttatacacaaacacttat 4991082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 320
Target Start/End: Complemental strand, 28676577 - 28676501
Alignment:
Q  244 atttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattct 320  Q
    ||||||||||||||| |||||| | ||||| || |||| |  ||||||||| ||||  |||| ||||||||||||||    
T  28676577 atttctaatcatatctagtctaattttaccgcatatcccattcaacatcctcatcttcgctatgcttactttattct 28676501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 31636213 - 31636261
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaa 283  Q
    |||| |||||||| ||||  |||||||||||||||||||||| ||||||    
T  31636213 aatgctgtcatttataattctatccagtctagtcttaccacaaatccaa 31636261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 86902 - 86967
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 300  Q
    ||||||||||||||||||| |||||  ||| |||||||||| |||||| ||||||||||| |||||    
T  86902 aatggtgtcatttctaatcttatcctttctggtcttaccactcatccagcgcaacatcctcatctc 86967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 4567 - 4660
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    ||||||||||||| ||||| ||||  ||||||||||||||  |||||||||||||||||| || || | ||   |||||| |||||||||||||    
T  4567 aatggtgtcatttataatcctatcatgtctagtcttaccattcatccaacgcaacatcctcatatctgttaaatttacttgattctcgtgttga 4660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 328
Target Start/End: Original strand, 11894 - 11986
Alignment:
Q  236 atggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 328  Q
    ||||||||||| |||||| |||   ||||||||||||| | |||||| ||||||||||| ||||| ||||  | ||||| |||||| ||||||    
T  11894 atggtgtcattcctaatcctattatgtctagtcttaccgctcatccagcgcaacatcctcatctctgctacacatacttgattctcatgttga 11986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 82708 - 82616
Alignment:
Q  235 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 327  Q
    ||||||||||||  ||||| ||||  |||||||||||| || ||||||  |||||||||| ||||| |||   ||||||| |||||| |||||    
T  82708 aatggtgtcattcttaatcctatcatgtctagtcttactactcatccagtgcaacatcctcatctccgctgcacttacttgattctcatgttg 82616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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