View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9376_low_15 (Length: 302)
Name: NF9376_low_15
Description: NF9376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9376_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 168; Significance: 5e-90; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 77 - 272
Target Start/End: Original strand, 7822303 - 7822498
Alignment:
| Q |
77 |
aaaaagttatcaacatgaagtgcttagtcaagccataaaagagatgtttctgcttctcacattcttagagaagagaatagaatcggtgtgtagacttttt |
176 |
Q |
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| T |
7822303 |
aaaaagttatcaacatgaagtgcttagtcaagccataaaagagatgtttctgcttctcacattcttagagaagagaatagaatcggtgtgtagacttttt |
7822402 |
T |
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| Q |
177 |
ggtgaaacttgaagcttctttaaacaatgatatattaattagtgtttctcctttagaagcattgcttaatcattttagaaatgattctttaggagc |
272 |
Q |
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| T |
7822403 |
ggttaaacttgaagtttctttaaacaacgatctattaattcgtatttctcctttagaagcattgcttaatcattttagaaatgattttttaggagc |
7822498 |
T |
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